3OIRA

Crystal structure of sulfate transporter family protein from wolinella succinogenes
Total Genus 37

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
37
sequence length
122
structure length
122
Chain Sequence
DDPDATSKKVVPLGVEIYEINGPFFFGVADRLKGVLDVIEETPKVFILRMRRVPVIDATGMHALWEFQESCEKRGTILLLSGVSDRLYGALNRFGFIEALGEERVFDHIDKALAYAKLLVET

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
source organism Wolinella succinogenes
publication title Crystal structure of sulfate transporter family protein from Wolinella succinogenes
rcsb
molecule keywords SULFATE TRANSPORTER SULFATE TRANSPORTER FAMILY PROTEIN
total genus 37
structure length 122
sequence length 122
chains with identical sequence B
ec nomenclature
pdb deposition date 2010-08-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 3oirA00
3F43A 3NY7A 2KLNA 3IHBA 1BUZA 1T6RA 5EUXA 3IH9A 3IH8A 5EUSA 5EUZA 3ZTBA 1H4YA 3T6OA 1TH8B 3OIZA 3AGDA 1H4ZA 3IHAA 4QTPA 3AGEA 2KA5A 5EUWA 1THNB 2VY9A 1TILB 1TIDB 3LLOA 3LKLA 4HYLA 5EUUA 1AUZA 1SBOA 4DGFA 3MGLA 4DGHA 3OIRA 3IF5A 4XS5A 1VC1A 1H4XA 3ZXNA 5EZBA
chains in the Genus database with same CATH superfamily
2RRLA 2DXLA 3IHBA 1FC6A 4AE2A 4AEJA 3V97A 3JU4A 1TH8B 3DJAA 3DUPA 1H4ZA 1V0EA 4HIZA 3V8VA 2OASA 3LKLA 4DGHA 3IF5A 5EZBA 3GMFA 1BUZA 5EUXA 5EUSA 3DORA 1K32A 1N6FA 3GVKA 3OIZA 1N6DA 3GHFA 2ZOAA 5EUWA 3EH7A 1THNB 5EUUA 2B78A 4HYLA 2CWWA 4DGFA 4XS5A 2AS0A 1HF2A 3LDFA 3NY7A 1WXXA 1T6RA 3D03A 3IH9A 3IH8A 3GVLA 4JC0A 3ZTBA 1H4YA 3AGDA 3IHAA 4QTPA 1V0FA 3AGEA 3K50A 2VY9A 1TILB 4DMGA 1BPLA 1TIDB 3LLOA 1AUZA 1J7XA 1VC1A 4GHNA 4L8KA 3ZXNA 3F43A 2KLNA 3GK7A 1WXWA 2DXNA 3C0KA 2ZO9B 3VSEA 3D3UA 5EUZA 3QDQA 3T6OA 1N6EA 2KA5A 3MOGA 1FC9A 1FCFA 1SBOA 3MGLA 4L1CA 3OIRA 1FC7A 1H4XA 3GVJA
chains in the Genus database with same CATH topology
3F43A 3NY7A 2KLNA 3IHBA 1BUZA 1T6RA 5EUXA 3IH9A 3IH8A 5EUSA 5EUZA 3ZTBA 1H4YA 3T6OA 1TH8B 3OIZA 3AGDA 1H4ZA 3IHAA 4QTPA 3AGEA 2KA5A 5EUWA 1THNB 2VY9A 1TILB 1TIDB 3LLOA 3LKLA 4HYLA 5EUUA 1AUZA 1SBOA 4DGFA 3MGLA 4DGHA 3OIRA 3IF5A 4XS5A 1VC1A 1H4XA 3ZXNA 5EZBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3F43 A;  3NY7 A;  2KLN A;  3IHB A;  1BUZ A;  1T6R A;  5EUX A;  3IH9 A;  3IH8 A;  5EUS A;  5EUZ A;  3ZTB A;  1H4Y A;  3T6O A;  1TH8 B;  3OIZ A;  3AGD A;  1H4Z A;  3IHA A;  4QTP A;  3AGE A;  2KA5 A;  5EUW A;  1THN B;  2VY9 A;  1TIL B;  1TID B;  3LLO A;  3LKL A;  4HYL A;  5EUU A;  1AUZ A;  1SBO A;  4DGF A;  3MGL A;  4DGH A;  3OIR A;  3IF5 A;  4XS5 A;  1VC1 A;  1H4X A;  3ZXN A;  5EZB A; 
#chains in the Genus database with same CATH topology
 2RRL A;  2DXL A;  3IHB A;  1FC6 A;  4AE2 A;  4AEJ A;  3V97 A;  3JU4 A;  1TH8 B;  3DJA A;  3DUP A;  1H4Z A;  1V0E A;  4HIZ A;  3V8V A;  2OAS A;  3LKL A;  4DGH A;  3IF5 A;  5EZB A;  3GMF A;  1BUZ A;  5EUX A;  5EUS A;  3DOR A;  1K32 A;  1N6F A;  3GVK A;  3OIZ A;  1N6D A;  3GHF A;  2ZOA A;  5EUW A;  3EH7 A;  1THN B;  5EUU A;  2B78 A;  4HYL A;  2CWW A;  4DGF A;  4XS5 A;  2AS0 A;  1HF2 A;  3LDF A;  3NY7 A;  1WXX A;  1T6R A;  3D03 A;  3IH9 A;  3IH8 A;  3GVL A;  4JC0 A;  3ZTB A;  1H4Y A;  3AGD A;  3IHA A;  4QTP A;  1V0F A;  3AGE A;  3K50 A;  2VY9 A;  1TIL B;  4DMG A;  1BPL A;  1TID B;  3LLO A;  1AUZ A;  1J7X A;  1VC1 A;  4GHN A;  4L8K A;  3ZXN A;  3F43 A;  2KLN A;  3GK7 A;  1WXW A;  2DXN A;  3C0K A;  2ZO9 B;  3VSE A;  3D3U A;  5EUZ A;  3QDQ A;  3T6O A;  1N6E A;  2KA5 A;  3MOG A;  1FC9 A;  1FCF A;  1SBO A;  3MGL A;  4L1C A;  3OIR A;  1FC7 A;  1H4X A;  3GVJ A; 
#chains in the Genus database with same CATH homology
 3F43 A;  3NY7 A;  2KLN A;  3IHB A;  1BUZ A;  1T6R A;  5EUX A;  3IH9 A;  3IH8 A;  5EUS A;  5EUZ A;  3ZTB A;  1H4Y A;  3T6O A;  1TH8 B;  3OIZ A;  3AGD A;  1H4Z A;  3IHA A;  4QTP A;  3AGE A;  2KA5 A;  5EUW A;  1THN B;  2VY9 A;  1TIL B;  1TID B;  3LLO A;  3LKL A;  4HYL A;  5EUU A;  1AUZ A;  1SBO A;  4DGF A;  3MGL A;  4DGH A;  3OIR A;  3IF5 A;  4XS5 A;  1VC1 A;  1H4X A;  3ZXN A;  5EZB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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