5EUWA

Rat prestin stas domain in complex with nitrate
Total Genus 41

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
41
sequence length
143
structure length
129
Chain Sequence
SPSYTVLGQLPDTDVYIDIDAYEEVKEIPGIKIFQINAPIYYANSDLYNIHTVILDFTQVNFMDSVGVKTLAGIVKEYGDVGIYVYLAGCSAQVVNDLTSNRFFENPALKELLFHSIHDAVLGSQVREA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transport protein
source organism Rattus norvegicus
publication title The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site.
pubmed doi rcsb
molecule keywords Prestin,Prestin
total genus 41
structure length 129
sequence length 143
ec nomenclature
pdb deposition date 2015-11-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF01740 STAS STAS domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.750.24 Alpha Beta 2-Layer Sandwich Transcription Regulator spoIIAA STAS domain 5euwA00
4QTPA 3ZXNA 3OIRA 3AGDA 3IF5A 3IH8A 1H4YA 3T6OA 1AUZA 1H4XA 2VY9A 3MGLA 3IHBA 4XS5A 1T6RA 1SBOA 3IH9A 5EUZA 2KLNA 1H4ZA 5EUWA 1TILB 4HYLA 3ZTBA 3LKLA 5EUSA 3AGEA 4DGHA 2KA5A 4DGFA 3OIZA 1THNB 5EUUA 3F43A 5EZBA 1BUZA 3LLOA 5EUXA 1TH8B 1TIDB 3NY7A 1VC1A 3IHAA
chains in the Genus database with same CATH superfamily
3ZXNA 3IH8A 4L1CA 3C0KA 3D3UA 3T6OA 3IHBA 5EUZA 4JC0A 1TILB 1FC6A 3LKLA 4DMGA 1WXWA 4GHNA 3F43A 3LLOA 5EUXA 3GVKA 4AE2A 3NY7A 3EH7A 3MGLA 1BPLA 4AEJA 1N6FA 3GMFA 1H4YA 1AUZA 2RRLA 2ZO9B 2KLNA 1H4ZA 3JU4A 5EUWA 3GHFA 3AGEA 3OIZA 2ZOAA 1N6DA 1TIDB 5EUSA 1WXXA 3AGDA 3V8VA 2CWWA 3K50A 2VY9A 1V0EA 1FC9A 3GVJA 4XS5A 3D03A 1SBOA 3IH9A 1J7XA 3DUPA 4HYLA 3ZTBA 1FC7A 3DORA 4DGFA 5EUUA 3VSEA 3MOGA 3IHAA 4QTPA 3OIRA 3GVLA 3IF5A 3V97A 1H4XA 3GK7A 1K32A 3DJAA 2OASA 1HF2A 3LDFA 2AS0A 2DXNA 1T6RA 4HIZA 1V0FA 4L8KA 2DXLA 1FCFA 1N6EA 4DGHA 2KA5A 1THNB 2B78A 5EZBA 1BUZA 3QDQA 1TH8B 1VC1A
chains in the Genus database with same CATH topology
4QTPA 3ZXNA 3OIRA 3AGDA 3IF5A 3IH8A 1H4YA 3T6OA 1AUZA 1H4XA 2VY9A 3MGLA 3IHBA 4XS5A 1T6RA 1SBOA 3IH9A 5EUZA 2KLNA 1H4ZA 5EUWA 1TILB 4HYLA 3ZTBA 3LKLA 5EUSA 3AGEA 4DGHA 2KA5A 4DGFA 3OIZA 1THNB 5EUUA 3F43A 5EZBA 1BUZA 3LLOA 5EUXA 1TH8B 1TIDB 3NY7A 1VC1A 3IHAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QTP A;  3ZXN A;  3OIR A;  3AGD A;  3IF5 A;  3IH8 A;  1H4Y A;  3T6O A;  1AUZ A;  1H4X A;  2VY9 A;  3MGL A;  3IHB A;  4XS5 A;  1T6R A;  1SBO A;  3IH9 A;  5EUZ A;  2KLN A;  1H4Z A;  5EUW A;  1TIL B;  4HYL A;  3ZTB A;  3LKL A;  5EUS A;  3AGE A;  4DGH A;  2KA5 A;  4DGF A;  3OIZ A;  1THN B;  5EUU A;  3F43 A;  5EZB A;  1BUZ A;  3LLO A;  5EUX A;  1TH8 B;  1TID B;  3NY7 A;  1VC1 A;  3IHA A; 
#chains in the Genus database with same CATH topology
 3ZXN A;  3IH8 A;  4L1C A;  3C0K A;  3D3U A;  3T6O A;  3IHB A;  5EUZ A;  4JC0 A;  1TIL B;  1FC6 A;  3LKL A;  4DMG A;  1WXW A;  4GHN A;  3F43 A;  3LLO A;  5EUX A;  3GVK A;  4AE2 A;  3NY7 A;  3EH7 A;  3MGL A;  1BPL A;  4AEJ A;  1N6F A;  3GMF A;  1H4Y A;  1AUZ A;  2RRL A;  2ZO9 B;  2KLN A;  1H4Z A;  3JU4 A;  5EUW A;  3GHF A;  3AGE A;  3OIZ A;  2ZOA A;  1N6D A;  1TID B;  5EUS A;  1WXX A;  3AGD A;  3V8V A;  2CWW A;  3K50 A;  2VY9 A;  1V0E A;  1FC9 A;  3GVJ A;  4XS5 A;  3D03 A;  1SBO A;  3IH9 A;  1J7X A;  3DUP A;  4HYL A;  3ZTB A;  1FC7 A;  3DOR A;  4DGF A;  5EUU A;  3VSE A;  3MOG A;  3IHA A;  4QTP A;  3OIR A;  3GVL A;  3IF5 A;  3V97 A;  1H4X A;  3GK7 A;  1K32 A;  3DJA A;  2OAS A;  1HF2 A;  3LDF A;  2AS0 A;  2DXN A;  1T6R A;  4HIZ A;  1V0F A;  4L8K A;  2DXL A;  1FCF A;  1N6E A;  4DGH A;  2KA5 A;  1THN B;  2B78 A;  5EZB A;  1BUZ A;  3QDQ A;  1TH8 B;  1VC1 A; 
#chains in the Genus database with same CATH homology
 4QTP A;  3ZXN A;  3OIR A;  3AGD A;  3IF5 A;  3IH8 A;  1H4Y A;  3T6O A;  1AUZ A;  1H4X A;  2VY9 A;  3MGL A;  3IHB A;  4XS5 A;  1T6R A;  1SBO A;  3IH9 A;  5EUZ A;  2KLN A;  1H4Z A;  5EUW A;  1TIL B;  4HYL A;  3ZTB A;  3LKL A;  5EUS A;  3AGE A;  4DGH A;  2KA5 A;  4DGF A;  3OIZ A;  1THN B;  5EUU A;  3F43 A;  5EZB A;  1BUZ A;  3LLO A;  5EUX A;  1TH8 B;  1TID B;  3NY7 A;  1VC1 A;  3IHA A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.