5EZB | Genus

Total Genus 43

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	43
sequence length	138
structure length	138
Chain Sequence	QYRILGQIPDTDIYCDVEEYEEVKEYPGIKIFQANTSLYFANSESYTSALKKKTGVDGSTNVHSLILDFAPVNFVDSVGAKTLKSVIKEYNEVGVCVCIASCSGPVMNELTRLNFFDNTVTRELLFHSIHDAVLACQG

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

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The Resolver thinks Pdb

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reading 138 atoms

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138 atoms created

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After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

molecule tags	Transport protein
source organism	Gallus gallus
publication title	The STAS domain of mammalian SLC26A5 prestin harbours an anion-binding site. pubmed doi rcsb
molecule keywords	Chicken prestin STAS domain,Chicken prestin STAS domain
total genus	43
structure length	138
sequence length	138
chains with identical sequence	B
ec nomenclature
pdb deposition date	2015-11-26

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF01740	STAS	STAS domain

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
3.30.750.24	Alpha Beta	2-Layer Sandwich	Transcription Regulator spoIIAA	STAS domain	5ezbA00

3IH8A 1H4YA 1SBOA 1THNB 5EZBA 1BUZA 5EUSA 1T6RA 1H4ZA 1TH8B 1TIDB 4HYLA 2KA5A 3NY7A 5EUXA 1AUZA 1VC1A 4DGHA 3OIRA 5EUWA 3LLOA 5EUZA 4DGFA 1TILB 3IH9A 3AGEA 3AGDA 4QTPA 4XS5A 5EUUA 3ZTBA 3F43A 3T6OA 3MGLA 3LKLA 3IF5A 3IHBA 2VY9A 1H4XA 3OIZA 3IHAA 3ZXNA 2KLNA
chains in the Genus database with same CATH superfamily

1SBOA 1THNB 5EUSA 1T6RA 1TH8B 2KA5A 3NY7A 4DMGA 3GMFA 3MOGA 3OIRA 1HF2A 5EUWA 3EH7A 5EUUA 2CWWA 3AGEA 1FC9A 3GHFA 3T6OA 2AS0A 3LKLA 3D03A 3IF5A 1H4XA 2KLNA 3GVJA 1J7XA 2RRLA 4JC0A 2ZO9B 3LLOA 1N6EA 1TILB 3ZTBA 1V0EA 1WXWA 1BPLA 4GHNA 2VY9A 2DXLA 2B78A 3DORA 3GVKA 3IH8A 1K32A 1H4ZA 2ZOAA 4HYLA 2DXNA 4L1CA 1N6DA 5EUZA 4DGFA 3QDQA 3IH9A 4XS5A 3F43A 3K50A 3MGLA 2OASA 3D3UA 3JU4A 3IHBA 3LDFA 4L8KA 3ZXNA 1FCFA 1FC6A 1H4YA 4HIZA 3GVLA 3V97A 5EZBA 1BUZA 1TIDB 5EUXA 1AUZA 1VC1A 4DGHA 1N6FA 3DUPA 4QTPA 3AGDA 1FC7A 3VSEA 3V8VA 1V0FA 4AE2A 3OIZA 3DJAA 4AEJA 3C0KA 3IHAA 3GK7A 1WXXA
chains in the Genus database with same CATH topology

#chains in the Genus database with same CATH superfamily
 3IH8 A;  1H4Y A;  1SBO A;  1THN B;  5EZB A;  1BUZ A;  5EUS A;  1T6R A;  1H4Z A;  1TH8 B;  1TID B;  4HYL A;  2KA5 A;  3NY7 A;  5EUX A;  1AUZ A;  1VC1 A;  4DGH A;  3OIR A;  5EUW A;  3LLO A;  5EUZ A;  4DGF A;  1TIL B;  3IH9 A;  3AGE A;  3AGD A;  4QTP A;  4XS5 A;  5EUU A;  3ZTB A;  3F43 A;  3T6O A;  3MGL A;  3LKL A;  3IF5 A;  3IHB A;  2VY9 A;  1H4X A;  3OIZ A;  3IHA A;  3ZXN A;  2KLN A; 
#chains in the Genus database with same CATH topology
 1SBO A;  1THN B;  5EUS A;  1T6R A;  1TH8 B;  2KA5 A;  3NY7 A;  4DMG A;  3GMF A;  3MOG A;  3OIR A;  1HF2 A;  5EUW A;  3EH7 A;  5EUU A;  2CWW A;  3AGE A;  1FC9 A;  3GHF A;  3T6O A;  2AS0 A;  3LKL A;  3D03 A;  3IF5 A;  1H4X A;  2KLN A;  3GVJ A;  1J7X A;  2RRL A;  4JC0 A;  2ZO9 B;  3LLO A;  1N6E A;  1TIL B;  3ZTB A;  1V0E A;  1WXW A;  1BPL A;  4GHN A;  2VY9 A;  2DXL A;  2B78 A;  3DOR A;  3GVK A;  3IH8 A;  1K32 A;  1H4Z A;  2ZOA A;  4HYL A;  2DXN A;  4L1C A;  1N6D A;  5EUZ A;  4DGF A;  3QDQ A;  3IH9 A;  4XS5 A;  3F43 A;  3K50 A;  3MGL A;  2OAS A;  3D3U A;  3JU4 A;  3IHB A;  3LDF A;  4L8K A;  3ZXN A;  1FCF A;  1FC6 A;  1H4Y A;  4HIZ A;  3GVL A;  3V97 A;  5EZB A;  1BUZ A;  1TID B;  5EUX A;  1AUZ A;  1VC1 A;  4DGH A;  1N6F A;  3DUP A;  4QTP A;  3AGD A;  1FC7 A;  3VSE A;  3V8V A;  1V0F A;  4AE2 A;  3OIZ A;  3DJA A;  4AEJ A;  3C0K A;  3IHA A;  3GK7 A;  1WXX A; 
#chains in the Genus database with same CATH homology
 3IH8 A;  1H4Y A;  1SBO A;  1THN B;  5EZB A;  1BUZ A;  5EUS A;  1T6R A;  1H4Z A;  1TH8 B;  1TID B;  4HYL A;  2KA5 A;  3NY7 A;  5EUX A;  1AUZ A;  1VC1 A;  4DGH A;  3OIR A;  5EUW A;  3LLO A;  5EUZ A;  4DGF A;  1TIL B;  3IH9 A;  3AGE A;  3AGD A;  4QTP A;  4XS5 A;  5EUU A;  3ZTB A;  3F43 A;  3T6O A;  3MGL A;  3LKL A;  3IF5 A;  3IHB A;  2VY9 A;  1H4X A;  3OIZ A;  3IHA A;  3ZXN A;  2KLN A;

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similar chains in the Genus database (?% sequence similarity)

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similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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5EZBA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

pfam database annotations