2K6LA

The solution structure of xacb0070 from xanthonomas axonopodis pv citri reveals this new protein is a member of the rhh family of transcriptional repressors
Total Genus 13

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
13
sequence length
51
structure length
51
Chain Sequence
MNTVRWNIAVSPDVDQSVRMFIAAQGGGRKGDLSRFIEDAVRAYLFERAVE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYAH2 (33-50)AH1 (12-25)Updating...
connected with : NaN
molecule tags Unknown function
source organism Xanthomonas axonopodis pv. citri
publication title The solution structure reveals that XACb0070 from the plant pathogen Xanthomonas citri belongs to the RHH superfamily of bacterial DNA-binding proteins
rcsb
molecule keywords Putative uncharacterized protein
total genus 13
structure length 51
sequence length 51
chains with identical sequence B
ec nomenclature
pdb deposition date 2008-07-11
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1220.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant Met repressor-like 2k6lA00
1BAZA 2BJ1A 1U9PA 2WVBA 2CAXA 2K6LA 2AY0A 2JXIA 4ME7E 3OD2A 3VEBA 2BSQE 1Q5VA 3GXQA 3VEAA 1MYLA 1PARA 2BNWA 2WVDA 2K9IA 2RBFA 1EA4A 2K1OA 3QOQA 4D8JA 1BDTA 1ARRA 1IRQA 1QTGA 2BJ9A 2BJ8A 1B28A 2K29A 1MYKA 1MNTA 2K5JA 2WVFA 2GPEA 4FXEA 3FMTA 2CADA 2WVEA 3VW4A 2CPGA 2CA9A 1X93A 2BJ3A 2BJ7A 2JXHA 1ARQA 2CAJA 1NLAA 2HZAA 3FT7A 2WVCA 1B01A 1P94A 2BA3A 2JXGA 3LGHA 2BNZA 4HV0A 1BDVA 2KELA 3H87C 2HZVA 2H1OE
chains in the Genus database with same CATH superfamily
1BAZA 2WVBA 2H3AA 2K6LA 3BSNA 1SH3A 2BSQE 3VEAA 1PARA 2K9IA 3NNEA 2WK4A 2BJ8A 1MYKA 3VW4A 3IR7A 2AN7A 1SIWA 2BJ3A 1ARQA 3FT7A 4MJWA 1B01A 3LGHA 2UUTA 4QPXA 3H87C 2BJ1A 1U9PA 4LRVA 2AY0A 4ME7E 3VEBA 1SH2A 3GXQA 4LQ3A 2WVDA 2A2BA 2B43A 3UPFA 2RBFA 2K1OA 4O4RA 1ARRA 2UUWA 2K5JA 2GPEA 2CADA 2WVEA 3NAHA 3SFUA 1X93A 2BJ7A 2WVCA 2JXGA 2BA3A 1OHNA 4NRTA 4HV0A 2HZVA 2Q2KA 2JXIA 2KOEA 3LJPA 1Q5VA 1MYLA 3G5OA 3NAIA 1EA4A 1BDTA 3NO7A 1QTGA 1IRQA 1Q16A 3H5YA 3UQSA 3FMTA 3SFGA 3H5XA 2ADLA 2CA9A 1NLAA 4AAIA 4LQ9A 3UR0A 2KELA 2H1OE 2CAXA 3OD2A 2KKEA 2BNWA 3QOQA 4D8JA 1B28A 2BJ9A 1SH0A 2K29A 1MNTA 2WVFA 4FXEA 2JBVA 2CPGA 2JXHA 2CAJA 2HZAA 2CKWA 1OG7A 3BSOA 1P94A 2BNZA 1BDVA 4NRUA 3QIDA
chains in the Genus database with same CATH topology
1BAZA 2BJ1A 1U9PA 2WVBA 2CAXA 2K6LA 2AY0A 2JXIA 4ME7E 3OD2A 3VEBA 2BSQE 1Q5VA 3GXQA 3VEAA 1MYLA 1PARA 2BNWA 2WVDA 2K9IA 2RBFA 1EA4A 2K1OA 3QOQA 4D8JA 1BDTA 1ARRA 1IRQA 1QTGA 2BJ9A 2BJ8A 1B28A 2K29A 1MYKA 1MNTA 2K5JA 2WVFA 2GPEA 4FXEA 3FMTA 2CADA 2WVEA 3VW4A 2CPGA 2CA9A 1X93A 2BJ3A 2BJ7A 2JXHA 1ARQA 2CAJA 1NLAA 2HZAA 3FT7A 2WVCA 1B01A 1P94A 2BA3A 2JXGA 3LGHA 2BNZA 4HV0A 1BDVA 2KELA 3H87C 2HZVA 2H1OE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1BAZ A;  2BJ1 A;  1U9P A;  2WVB A;  2CAX A;  2K6L A;  2AY0 A;  2JXI A;  4ME7 E;  3OD2 A;  3VEB A;  2BSQ E;  1Q5V A;  3GXQ A;  3VEA A;  1MYL A;  1PAR A;  2BNW A;  2WVD A;  2K9I A;  2RBF A;  1EA4 A;  2K1O A;  3QOQ A;  4D8J A;  1BDT A;  1ARR A;  1IRQ A;  1QTG A;  2BJ9 A;  2BJ8 A;  1B28 A;  2K29 A;  1MYK A;  1MNT A;  2K5J A;  2WVF A;  2GPE A;  4FXE A;  3FMT A;  2CAD A;  2WVE A;  3VW4 A;  2CPG A;  2CA9 A;  1X93 A;  2BJ3 A;  2BJ7 A;  2JXH A;  1ARQ A;  2CAJ A;  1NLA A;  2HZA A;  3FT7 A;  2WVC A;  1B01 A;  1P94 A;  2BA3 A;  2JXG A;  3LGH A;  2BNZ A;  4HV0 A;  1BDV A;  2KEL A;  3H87 C;  2HZV A;  2H1O E; 
#chains in the Genus database with same CATH topology
 1BAZ A;  2WVB A;  2H3A A;  2K6L A;  3BSN A;  1SH3 A;  2BSQ E;  3VEA A;  1PAR A;  2K9I A;  3NNE A;  2WK4 A;  2BJ8 A;  1MYK A;  3VW4 A;  3IR7 A;  2AN7 A;  1SIW A;  2BJ3 A;  1ARQ A;  3FT7 A;  4MJW A;  1B01 A;  3LGH A;  2UUT A;  4QPX A;  3H87 C;  2BJ1 A;  1U9P A;  4LRV A;  2AY0 A;  4ME7 E;  3VEB A;  1SH2 A;  3GXQ A;  4LQ3 A;  2WVD A;  2A2B A;  2B43 A;  3UPF A;  2RBF A;  2K1O A;  4O4R A;  1ARR A;  2UUW A;  2K5J A;  2GPE A;  2CAD A;  2WVE A;  3NAH A;  3SFU A;  1X93 A;  2BJ7 A;  2WVC A;  2JXG A;  2BA3 A;  1OHN A;  4NRT A;  4HV0 A;  2HZV A;  2Q2K A;  2JXI A;  2KOE A;  3LJP A;  1Q5V A;  1MYL A;  3G5O A;  3NAI A;  1EA4 A;  1BDT A;  3NO7 A;  1QTG A;  1IRQ A;  1Q16 A;  3H5Y A;  3UQS A;  3FMT A;  3SFG A;  3H5X A;  2ADL A;  2CA9 A;  1NLA A;  4AAI A;  4LQ9 A;  3UR0 A;  2KEL A;  2H1O E;  2CAX A;  3OD2 A;  2KKE A;  2BNW A;  3QOQ A;  4D8J A;  1B28 A;  2BJ9 A;  1SH0 A;  2K29 A;  1MNT A;  2WVF A;  4FXE A;  2JBV A;  2CPG A;  2JXH A;  2CAJ A;  2HZA A;  2CKW A;  1OG7 A;  3BSO A;  1P94 A;  2BNZ A;  1BDV A;  4NRU A;  3QID A; 
#chains in the Genus database with same CATH homology
 1BAZ A;  2BJ1 A;  1U9P A;  2WVB A;  2CAX A;  2K6L A;  2AY0 A;  2JXI A;  4ME7 E;  3OD2 A;  3VEB A;  2BSQ E;  1Q5V A;  3GXQ A;  3VEA A;  1MYL A;  1PAR A;  2BNW A;  2WVD A;  2K9I A;  2RBF A;  1EA4 A;  2K1O A;  3QOQ A;  4D8J A;  1BDT A;  1ARR A;  1IRQ A;  1QTG A;  2BJ9 A;  2BJ8 A;  1B28 A;  2K29 A;  1MYK A;  1MNT A;  2K5J A;  2WVF A;  2GPE A;  4FXE A;  3FMT A;  2CAD A;  2WVE A;  3VW4 A;  2CPG A;  2CA9 A;  1X93 A;  2BJ3 A;  2BJ7 A;  2JXH A;  1ARQ A;  2CAJ A;  1NLA A;  2HZA A;  3FT7 A;  2WVC A;  1B01 A;  1P94 A;  2BA3 A;  2JXG A;  3LGH A;  2BNZ A;  4HV0 A;  1BDV A;  2KEL A;  3H87 C;  2HZV A;  2H1O E; 
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similar chains in the pdb database (?% sequence similarity)

 
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