3GXQA

Structure of arta and dna complex
Total Genus 15

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
15
sequence length
53
structure length
53
Chain Sequence
NSVFFGKKKKVSLHLLVDPDMKDEIIKYAQEKDFDNVSQAGREILKKGLEQIA

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (25-39)AH2 (43-57)TI'1 (39-42)EMPTYUpdating...
connected with : NaN
molecule tags Dna binding protein/dna
source organism Staphylococcus aureus subsp. aureus usa300
publication title The Staphylococcus aureus pSK41 plasmid-encoded ArtA protein is a master regulator of plasmid transmission genes and contains a RHH motif used in alternate DNA-binding modes.
pubmed doi rcsb
molecule keywords Putative regulator of transfer genes ArtA
total genus 15
structure length 53
sequence length 53
chains with identical sequence B
ec nomenclature
pdb deposition date 2009-04-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1220.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant Met repressor-like 3gxqA00
1P94A 1MYLA 1Q5VA 2WVDA 1EA4A 2BJ8A 2H1OE 3OD2A 3FMTA 1ARQA 2JXIA 2K5JA 1U9PA 1MNTA 2CPGA 2KELA 2BNWA 1BDVA 2CADA 3QOQA 2AY0A 2GPEA 1IRQA 2BJ7A 3VW4A 2WVFA 3VEAA 2RBFA 1QTGA 3LGHA 2CAXA 1BDTA 2K1OA 2K6LA 1PARA 2JXHA 1BAZA 1B01A 2WVEA 1NLAA 1MYKA 4D8JA 2BSQE 1B28A 2WVCA 1X93A 2BA3A 2WVBA 4FXEA 2BJ9A 3H87C 4HV0A 2K9IA 2K29A 3GXQA 1ARRA 2HZAA 3VEBA 2BNZA 2HZVA 3FT7A 2CAJA 2BJ1A 2JXGA 2BJ3A 4ME7E 2CA9A
chains in the Genus database with same CATH superfamily
2A2BA 4NRTA 1SH0A 2BNWA 2GPEA 3LJPA 2WVFA 3VEAA 2RBFA 1BDTA 1PARA 3H5YA 1NLAA 4HV0A 2BA3A 3H87C 4LRVA 2H3AA 1SH3A 3BSNA 3NAIA 4QPXA 1Q5VA 3NNEA 2B43A 3FMTA 2K5JA 3QOQA 3QIDA 1IRQA 2BJ7A 1Q16A 1QTGA 3NO7A 3LGHA 1OG7A 3SFUA 2K1OA 2JXHA 1MYKA 2BJ9A 3UQSA 2BNZA 2BJ3A 3G5OA 4LQ3A 2KKEA 2UUWA 1P94A 1MYLA 2WVDA 2CA9A 1ARQA 2JXIA 1SH2A 1U9PA 1MNTA 4MJWA 2KELA 2ADLA 2CADA 1OHNA 2AY0A 3VW4A 2CAXA 4LQ9A 2KOEA 2K6LA 1B01A 2WVEA 4D8JA 2BSQE 3SFGA 2WVBA 4O4RA 4FXEA 3GXQA 2HZVA 2K29A 2WK4A 1ARRA 2Q2KA 2AN7A 3FT7A 2JXGA 4ME7E 3BSOA 1SIWA 1EA4A 2BJ8A 2H1OE 3OD2A 2CPGA 4AAIA 4NRUA 1BDVA 3UR0A 1BAZA 2UUTA 3H5XA 3NAHA 3IR7A 1B28A 2WVCA 1X93A 3UPFA 2K9IA 2HZAA 3VEBA 2CAJA 2BJ1A 2JBVA 2CKWA
chains in the Genus database with same CATH topology
1P94A 1MYLA 1Q5VA 2WVDA 1EA4A 2BJ8A 2H1OE 3OD2A 3FMTA 1ARQA 2JXIA 2K5JA 1U9PA 1MNTA 2CPGA 2KELA 2BNWA 1BDVA 2CADA 3QOQA 2AY0A 2GPEA 1IRQA 2BJ7A 3VW4A 2WVFA 3VEAA 2RBFA 1QTGA 3LGHA 2CAXA 1BDTA 2K1OA 2K6LA 1PARA 2JXHA 1BAZA 1B01A 2WVEA 1NLAA 1MYKA 4D8JA 2BSQE 1B28A 2WVCA 1X93A 2BA3A 2WVBA 4FXEA 2BJ9A 3H87C 4HV0A 2K9IA 2K29A 3GXQA 1ARRA 2HZAA 3VEBA 2BNZA 2HZVA 3FT7A 2CAJA 2BJ1A 2JXGA 2BJ3A 4ME7E 2CA9A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1P94 A;  1MYL A;  1Q5V A;  2WVD A;  1EA4 A;  2BJ8 A;  2H1O E;  3OD2 A;  3FMT A;  1ARQ A;  2JXI A;  2K5J A;  1U9P A;  1MNT A;  2CPG A;  2KEL A;  2BNW A;  1BDV A;  2CAD A;  3QOQ A;  2AY0 A;  2GPE A;  1IRQ A;  2BJ7 A;  3VW4 A;  2WVF A;  3VEA A;  2RBF A;  1QTG A;  3LGH A;  2CAX A;  1BDT A;  2K1O A;  2K6L A;  1PAR A;  2JXH A;  1BAZ A;  1B01 A;  2WVE A;  1NLA A;  1MYK A;  4D8J A;  2BSQ E;  1B28 A;  2WVC A;  1X93 A;  2BA3 A;  2WVB A;  4FXE A;  2BJ9 A;  3H87 C;  4HV0 A;  2K9I A;  2K29 A;  3GXQ A;  1ARR A;  2HZA A;  3VEB A;  2BNZ A;  2HZV A;  3FT7 A;  2CAJ A;  2BJ1 A;  2JXG A;  2BJ3 A;  4ME7 E;  2CA9 A; 
#chains in the Genus database with same CATH topology
 2A2B A;  4NRT A;  1SH0 A;  2BNW A;  2GPE A;  3LJP A;  2WVF A;  3VEA A;  2RBF A;  1BDT A;  1PAR A;  3H5Y A;  1NLA A;  4HV0 A;  2BA3 A;  3H87 C;  4LRV A;  2H3A A;  1SH3 A;  3BSN A;  3NAI A;  4QPX A;  1Q5V A;  3NNE A;  2B43 A;  3FMT A;  2K5J A;  3QOQ A;  3QID A;  1IRQ A;  2BJ7 A;  1Q16 A;  1QTG A;  3NO7 A;  3LGH A;  1OG7 A;  3SFU A;  2K1O A;  2JXH A;  1MYK A;  2BJ9 A;  3UQS A;  2BNZ A;  2BJ3 A;  3G5O A;  4LQ3 A;  2KKE A;  2UUW A;  1P94 A;  1MYL A;  2WVD A;  2CA9 A;  1ARQ A;  2JXI A;  1SH2 A;  1U9P A;  1MNT A;  4MJW A;  2KEL A;  2ADL A;  2CAD A;  1OHN A;  2AY0 A;  3VW4 A;  2CAX A;  4LQ9 A;  2KOE A;  2K6L A;  1B01 A;  2WVE A;  4D8J A;  2BSQ E;  3SFG A;  2WVB A;  4O4R A;  4FXE A;  3GXQ A;  2HZV A;  2K29 A;  2WK4 A;  1ARR A;  2Q2K A;  2AN7 A;  3FT7 A;  2JXG A;  4ME7 E;  3BSO A;  1SIW A;  1EA4 A;  2BJ8 A;  2H1O E;  3OD2 A;  2CPG A;  4AAI A;  4NRU A;  1BDV A;  3UR0 A;  1BAZ A;  2UUT A;  3H5X A;  3NAH A;  3IR7 A;  1B28 A;  2WVC A;  1X93 A;  3UPF A;  2K9I A;  2HZA A;  3VEB A;  2CAJ A;  2BJ1 A;  2JBV A;  2CKW A; 
#chains in the Genus database with same CATH homology
 1P94 A;  1MYL A;  1Q5V A;  2WVD A;  1EA4 A;  2BJ8 A;  2H1O E;  3OD2 A;  3FMT A;  1ARQ A;  2JXI A;  2K5J A;  1U9P A;  1MNT A;  2CPG A;  2KEL A;  2BNW A;  1BDV A;  2CAD A;  3QOQ A;  2AY0 A;  2GPE A;  1IRQ A;  2BJ7 A;  3VW4 A;  2WVF A;  3VEA A;  2RBF A;  1QTG A;  3LGH A;  2CAX A;  1BDT A;  2K1O A;  2K6L A;  1PAR A;  2JXH A;  1BAZ A;  1B01 A;  2WVE A;  1NLA A;  1MYK A;  4D8J A;  2BSQ E;  1B28 A;  2WVC A;  1X93 A;  2BA3 A;  2WVB A;  4FXE A;  2BJ9 A;  3H87 C;  4HV0 A;  2K9I A;  2K29 A;  3GXQ A;  1ARR A;  2HZA A;  3VEB A;  2BNZ A;  2HZV A;  3FT7 A;  2CAJ A;  2BJ1 A;  2JXG A;  2BJ3 A;  4ME7 E;  2CA9 A; 
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