4AAIA

Thermostable protein from hyperthermophilic virus ssv-rh
Total Genus 16
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
16
sequence length
73
structure length
73
Chain Sequence
MVESKKIAKKKTTLAFDEDVYHTLKLVSVYLNRDMTEIIEEAVVMWLIQNKEKLPNELKPKIDEISKRFFPAK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural Studies of E73 from a Hyperthermophilic Archaeal Virus Identify the "Rh3" Domain, an Elaborated Ribbon-Helix- Helix Motif Involved in DNA Recognition.
pubmed doi rcsb
molecule tags Viral protein
source organism Sulfolobus virus ragged hills
molecule keywords ORF E73
total genus 16
structure length 73
sequence length 73
chains with identical sequence B
ec nomenclature
pdb deposition date 2011-12-02
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.10.1220.150 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant Arc Repressor Mutant 4aaiA01
4AAIA
chains in the Genus database with same CATH superfamily
2K29A 2UUWA 3UPFA 1OG7A 1ARQA 1MYLA 4D8JA 2K9IA 2BJ3A 2RBFA 1P94A 1QTGA 2B43A 1SH3A 2BJ1A 4MJWA 1NLAA 3QOQA 3OD2A 2JXIA 1B01A 2CKWA 1BDVA 2BJ7A 1ARRA 1MNTA 4LQ3A 2AY0A 2K5JA 1IRQA 2BSQE 4HV0A 4ME7E 2ADLA 4AAIA 3H5YA 2HZAA 3VW4A 1EA4A 3SFUA 2BNWA 3SFGA 3LJPA 2WK4A 3UR0A 2K6LA 2CAJA 1OHNA 3VEAA 1B28A 2BJ9A 2KOEA 3H5XA 2K1OA 2GPEA 2WVBA 3UQSA 2H1OE 3LGHA 2WVFA 2BA3A 3G5OA 2HZVA 2KELA 2CAXA 1U9PA 1X93A 1BAZA 1SIWA 3NO7A 2WVEA 2CADA 4NRTA 4LQ9A 4NRUA 1Q16A 1BDTA 3IR7A 3BSNA 3NAHA 1SH0A 3GXQA 3NNEA 3BSOA 2JXHA 2CPGA 3NAIA 2JXGA 1SH2A 1Q5VA 2KKEA 4O4RA 3VEBA 2WVDA 4QPXA 2BJ8A 4LRVA 3QIDA 2A2BA 1MYKA 2Q2KA 2BNZA 3FMTA 3H87C 2AN7A 4FXEA 1PARA 2UUTA 2H3AA 2CA9A 2JBVA 3FT7A 2WVCA
chains in the Genus database with same CATH topology
3G5OA 2KKEA 2UUWA 3UPFA 1OG7A 4O4RA 2ADLA 4AAIA 3H5YA 3SFUA 4QPXA 2B43A 4LRVA 1SIWA 3QIDA 2A2BA 1SH3A 3NO7A 4NRTA 4MJWA 4LQ9A 3SFGA 3LJPA 2Q2KA 2WK4A 3UR0A 1OHNA 2AN7A 2CKWA 4NRUA 1Q16A 2UUTA 2H3AA 3IR7A 2KOEA 3NAHA 1SH0A 3BSNA 3NNEA 3BSOA 4LQ3A 3NAIA 3H5XA 2JBVA 3UQSA 1SH2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4AAI A; 
#chains in the Genus database with same CATH topology
 2K29 A;  2UUW A;  3UPF A;  1OG7 A;  1ARQ A;  1MYL A;  4D8J A;  2K9I A;  2BJ3 A;  2RBF A;  1P94 A;  1QTG A;  2B43 A;  1SH3 A;  2BJ1 A;  4MJW A;  1NLA A;  3QOQ A;  3OD2 A;  2JXI A;  1B01 A;  2CKW A;  1BDV A;  2BJ7 A;  1ARR A;  1MNT A;  4LQ3 A;  2AY0 A;  2K5J A;  1IRQ A;  2BSQ E;  4HV0 A;  4ME7 E;  2ADL A;  4AAI A;  3H5Y A;  2HZA A;  3VW4 A;  1EA4 A;  3SFU A;  2BNW A;  3SFG A;  3LJP A;  2WK4 A;  3UR0 A;  2K6L A;  2CAJ A;  1OHN A;  3VEA A;  1B28 A;  2BJ9 A;  2KOE A;  3H5X A;  2K1O A;  2GPE A;  2WVB A;  3UQS A;  2H1O E;  3LGH A;  2WVF A;  2BA3 A;  3G5O A;  2HZV A;  2KEL A;  2CAX A;  1U9P A;  1X93 A;  1BAZ A;  1SIW A;  3NO7 A;  2WVE A;  2CAD A;  4NRT A;  4LQ9 A;  4NRU A;  1Q16 A;  1BDT A;  3IR7 A;  3BSN A;  3NAH A;  1SH0 A;  3GXQ A;  3NNE A;  3BSO A;  2JXH A;  2CPG A;  3NAI A;  2JXG A;  1SH2 A;  1Q5V A;  2KKE A;  4O4R A;  3VEB A;  2WVD A;  4QPX A;  2BJ8 A;  4LRV A;  3QID A;  2A2B A;  1MYK A;  2Q2K A;  2BNZ A;  3FMT A;  3H87 C;  2AN7 A;  4FXE A;  1PAR A;  2UUT A;  2H3A A;  2CA9 A;  2JBV A;  3FT7 A;  2WVC A; 
#chains in the Genus database with same CATH homology
 3G5O A;  2KKE A;  2UUW A;  3UPF A;  1OG7 A;  4O4R A;  2ADL A;  4AAI A;  3H5Y A;  3SFU A;  4QPX A;  2B43 A;  4LRV A;  1SIW A;  3QID A;  2A2B A;  1SH3 A;  3NO7 A;  4NRT A;  4MJW A;  4LQ9 A;  3SFG A;  3LJP A;  2Q2K A;  2WK4 A;  3UR0 A;  1OHN A;  2AN7 A;  2CKW A;  4NRU A;  1Q16 A;  2UUT A;  2H3A A;  3IR7 A;  2KOE A;  3NAH A;  1SH0 A;  3BSN A;  3NNE A;  3BSO A;  4LQ3 A;  3NAI A;  3H5X A;  2JBV A;  3UQS A;  1SH2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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