1PGR | Genus

Total Genus 61

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus	61
sequence length	169
structure length	161
Chain Sequence	ASSLPQSFLLKCLEQVRKIQGDGAALQEKLCATYKLCHPEELVLLGHSLGIPWAPLSSCPSQALQLAGCLSQLHSGLFLYQGLLQALEGISPELGPTLDTLQLDVADFATTIWQQMEELGMAAMPAFASAFQRRAGGVLVASHLQSFLEVSYRVLRHLAQP

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

loadScript /static/js/j2s/core/package.js

loadScript /static/js/j2s/core/corejmol.z.js

loadScript /static/js/j2s/core/corescript.z.js

JSmol exec jmolApplet0 start applet null

Jmol JavaScript applet jmolApplet0__587433504715381__ initializing

Jmol getValue debug null

Jmol getValue logLevel null

Jmol getValue allowjavascript null

AppletRegistry.checkIn(jmolApplet0__587433504715381__)

vwrOptions:

{ "name":"jmolApplet0","applet":true,"documentBase":"https://genus.fuw.edu.pl/view/1PGR/A/","platform":"J.awtjs2d.Platform","fullName":"jmolApplet0__587433504715381__","codePath":"https:/static/js/j2s/","display":"jmolApplet0_canvas2d","signedApplet":"true","appletReadyCallback":"Jmol._readyCallback","statusListener":"[J.appletjs.Jmol object]","syncId":"587433504715381","bgcolor":"white" }

setting document base to "https://genus.fuw.edu.pl/view/1PGR/A/"

Jmol Version: 14.29.13 2018-04-17 17:17

java.vendor: Java2Script (HTML5)

java.version: 2018-01-28 23:38:52 (JSmol/j2s)

os.name: Mozilla/5.0 AppleWebKit/537.36 (KHTML, like Gecko; compatible; ClaudeBot/1.0; +claudebot@anthropic.com)

Access: ALL

memory: 0.0/0.0

processors available: 1

useCommandThread: false

appletId:jmolApplet0 (signed)

Jmol getValue emulate null

defaults = "Jmol"

Jmol getValue boxbgcolor null

Jmol getValue bgcolor white

backgroundColor = "white"

Jmol getValue ANIMFRAMECallback null

Jmol getValue APPLETREADYCallback Jmol._readyCallback

APPLETREADYCallback = "Jmol._readyCallback"

callback set for APPLETREADYCallback Jmol._readyCallback APPLETREADY

Jmol getValue ATOMMOVEDCallback null

Jmol getValue AUDIOCallback null

Jmol getValue CLICKCallback null

Jmol getValue DRAGDROPCallback null

Jmol getValue ECHOCallback null

Jmol getValue ERRORCallback null

Jmol getValue EVALCallback null

Jmol getValue HOVERCallback null

Jmol getValue IMAGECallback null

Jmol getValue LOADSTRUCTCallback null

Jmol getValue MEASURECallback null

Jmol getValue MESSAGECallback null

Jmol getValue MINIMIZATIONCallback null

Jmol getValue SERVICECallback null

Jmol getValue PICKCallback null

Jmol getValue RESIZECallback null

Jmol getValue SCRIPTCallback null

Jmol getValue SYNCCallback null

Jmol getValue STRUCTUREMODIFIEDCallback null

Jmol getValue doTranslate null

language=en_US

Jmol getValue popupMenu null

Jmol getValue script null

Jmol getValue loadInline null

Jmol getValue load null

Jmol applet jmolApplet0__587433504715381__ ready

script 1 started

platformSpeed = 8

Viewer cachePut cache://localLOAD_/file/5cfbcb47de5ff46f74e03ef6/pdb.gz

Viewer cachePut https://genus.fuw.edu.pl/file/5cfbcb47de5ff46f74e03ef6/pdb.gz

FileManager.getAtomSetCollectionFromFile(/file/5cfbcb47de5ff46f74e03ef6/pdb.gz)

loadScript /static/js/j2s/core/corezip.z.js

The Resolver thinks Pdb

loadScript /static/js/j2s/core/corebio.z.js

Time for openFile(/file/5cfbcb47de5ff46f74e03ef6/pdb.gz): 1470 ms

reading 161 atoms

ModelSet: haveSymmetry:false haveUnitcells:false haveFractionalCoord:false

1 model in this collection. Use getProperty "modelInfo" or getProperty "auxiliaryInfo" to inspect them.

Default Van der Waals type for model set to Jmol

161 atoms created

ModelSet: autobonding; use autobond=false to not generate bonds automatically

Time for creating model: 24 ms

Adding embedded #jmolscript: select ({0:160});backbone only;select *;

platformSpeed = 8

cartoonsFancy = true

sheetSmoothing = 1.0

traceAlpha = true

loadScript /static/js/j2s/core/corescriptcmd.z.js

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Genus data interpretation

Chord Diagram

molecule tags	Cytokine
source organism	Homo sapiens
publication title	Atomic structure of the GCSF-receptor complex showing a new cytokine-receptor recognition scheme. pubmed doi rcsb
molecule keywords	PROTEIN (GRANULOCYTE COLONY-STIMULATING FACTOR)
total genus	61
structure length	161
sequence length	169
chains with identical sequence	C, E, G
ec nomenclature
pdb deposition date	1999-03-08

pfam database annotations

chain	Pfam Accession Code	Pfam Family Identifier	Pfam Description
A	PF16647	GCSF	Granulocyte colony-stimulating factor

Image from the rcsb pdb (www.rcsb.org)

cath code	Class	Architecture	Topology	Homology	Domain
1.20.1250.10	Mainly Alpha	Up-down Bundle	Growth Hormone; Chain: A;	Growth Hormone; Chain: A;	1pgrA00

3BPNA 2D48A 2KZ1A 1JLIA 4ZS7A 1Z7CA 3QB1A 1HIKA 3QWRB 1ALUA 1IK0A 1N1FA 2HYMB 3VA2A 1BUYA 2Q7NB 1QVNA 3L5WI 1ETEA 3BESL 3B5KA 3DUHC 1ITFA 4GRWA 3SE4B 3EW3A 1AU1A 1WU3I 2O26A 1M47A 1HIJA 5C7XA 1B5LA 1D9GA 3LB6A 3INKC 2L3OA 1PGRA 1CSGA 3QB7A 2INTA 3NPZA 4FA8E 1M4BA 3S9DA 1Y6NL 1Z92A 5D70A 4WRLB 1FYHA 1P9MB 5D22A 1PW6A 2B8ZA 1NBPA 1EKUA 1BP3A 1EXZA 1RCBA 1RFBA 1PY2A 1EVSA 1BBNA 1ITMA 1BGDA 3Q1SI 3UX9A 2B8XA 1INRA 3NCFA 1Y6KL 5D71A 1A22A 3PIVA 4MHLA 3UF5A 4NI7A 2IL6A 3D85C 1CNT1 4YPGC 1M4CA 3SE3B 3MZGA 1V7MV 4O6KA 1AX8A 1CN4C 1LKIA 3BPLA 2E9WC 2B90A 3QT2C 1HZIA 2ERJD 1FG9A 1YKBA 3UEZE 1Y6ML 1CYLA 1SCFA 1GA3A 3G9VB 3L5XA 2CYKA 4DOHA 1PVHB 2GMFA 1LK3A 2B91A 4YQXA 1A7MA 1F6FA 3D48P 5D28B 4O9HA 5E4EA 3DGCL 1F45B 1D9CA 3OQ3A 3HHRA 1M48A 1ILKA 1AXIA 1RW5A 2LAGA 1KF9A 5D72A 1IL6A 1V7NV 4NKQC 4J4LC 4NEJA 3NCCA 3N06A 3NCBA 3UF2A 2B5IA 3HMXB 1HULA 1J7VL 4Z5RD 3EJJA 1EERA 1IARA 1M4AA 3D87A 1BGCA 3G6DA 4CNIC 2Q98A 4ZF7A 3DLQI 3PIWA 1GNCA 3WCYI 5KNHI 5FUCA 4X51A 2D9QA 4YDYI 1M49A 1LQSL 3QAZA 2H24A 4PS4A 2B8YA 1EMRA 2LMSA 4NEMA 5L6YC 3BPOA 5FHXA 1IRLA 1HUWA 1RHGA 1HWHA 1M4RA 4RS1A 1HWGA 1CD9A 2ILKA 1VLKA 5LQBA 4I77Z 1BGEA 3NCEA 1BCNA 1HGUA 2O27A 2L3YA 1I1RB 3N0PA 1IJZA 1ITLA 4YUEC 3LB6B 4NI9A 2B8UA 1ITIA
chains in the Genus database with same CATH superfamily

1Y1WD 2Y5YA 4J05A 1ALUA 3HOWD 4D2DA 1QVNA 1ITFA 4GRWA 3EW3A 1AU1A 1M47A 1B5LA 1D9GA 1PGRA 1CSGA 4OH3A 4LDSA 3QB7A 5IYBD 4NN7A 2JA5D 3HOXD 1PW6A 4ZWCA 1EKUA 1BP3A 1RFBA 1PY2A 3Q1SI 5A2OA 1A22A 4NI7A 3DI2A 4YPGC 1V7MV 1CN4C 2E9WC 2B90A 3QT2C 2ERJD 2PSMA 1PVHB 2B91A 4YQXA 3H0GD 5E4EA 1D9CA 2Z3QA 1M48A 5D72A 1IL6A 4QIQA 3UF2A 2B5IA 4NN5A 4CNIC 3DLQI 4A3LD 5FUCA 4ZYRA 1LQSL 4GS7A 4W6VA 4JR9A 1VLKA 3NCEA 1HGUA 2L3YA 2VUMD 1ITLA 4A3ED 3PO2D 5C3ED 3LB6B 1Y1VD 1ITIA 1JLIA 5TS9A 1HIKA 1IK0A 2HYMB 1BUYA 2B63D 3BESL 2V8NA 3WDOA 4A3JD 3NPZA 1M4BA 4WRLB 5C44D 1P9MB 5D22A 4A3ID 2JA6D 1EXZA 4GC0A 1BBNA 1ITMA 3UX9A 4APSA 2B8XA 4U4WA 4A3BD 3PO3D 3NCFA 4DKCA 4MHLA 4TPGA 3OG4A 1M4CA 3MZGA 4O6KA 1AX8A 3BPLA 5D58A 4TPHA 3UEZE 4BBRD 1GA3A 2CFPA 3G9VB 3L5XA 2CYKA 4DOHA 3D48P 3DGCL 1F45B 3OQ3A 3AYHA 1AXIA 2LAGA 4EXNA 3HOZD 4NKQC 5D59A 1HULA 5C65A 1J7VL 4Z5RD 3EJJA 4DKDA 1EERA 1IARA 1M4AA 3I4MD 3D87A 1BGCA 3G6DA 4IKXA 2Q98A 3HOVD 1GNCA 3WCYI 5KNHI 1M49A 5GXBA 2Z3RA 3QAZA 4OAAA 4YB9D 3BPOA 1HUWA 1RHGA 1M4RA 2Q14A 1HWGA 1CD9A 2ILKA 1BCNA 2O27A 2R92D 4DKEA 2B8UA 4A3DD 5IP7D 4IKYA 2KZ1A 4D2CA 3QWRB 4IU9A 3VA2A 2Q7NB 1ETEA 3B5KA 3DUHC 3HHCA 2O26A 1HIJA 4LEPA 3INKC 3S9DA 5D70A 4GBZA 4A3FD 2CFQA 1NBPA 4U4TA 1BGDA 5D71A 5IP9D 3PIVA 3UF5A 1CNT1 2O6IA 4BY7D 1HZIA 1YKBA 5IYDD 2R93D 4D2BA 1CYLA 1SCFA 5C4XD 1LK3A 1A7MA 4IU8A 5D28B 4O9HA 3DI3A 4DKFA 1PV6A 1ILKA 1RW5A 1V7NV 4NEJA 3NCCA 3NCBA 2JA8D 3IRHA 4TPJA 4JREA 4JA3A 4ZF7A 2JA7D 4X51A 4YDYI 3I4ND 1EMRA 5FHXA 1IRLA 3FKID 4RS1A 1WCMD 3O7PA 1IJZA 4GBYA 4YUEC 4NI9A 4XNIA 4A3CD 2XQBA 3BPNA 5A2NA 2D48A 4YBQA 4ZS7A 1Z7CA 3QB1A 4A3GD 3O7QA 3TGXB 4A3MD 1N1FA 4BY1D 3L5WI 4Q65A 4LRLA 3SE4B 5EQHA 4ZWBA 1WU3I 5C7XA 4BXXD 3LB6A 2L3OA 4IKZA 4U4VA 2INTA 4FA8E 1PV7A 1Y6NL 1Z92A 5IYCD 1FYHA 2B8ZA 1RCBA 1EVSA 1INRA 1Y6KL 2IL6A 3D85C 4IKVA 5D6KA 3H3VE 3SE3B 1LKIA 5EQGA 3HOUD 1FG9A 4A93D 1Y6ML 5FLMD 2GMFA 1F6FA 2C35A 3HHRA 4BBSD 1KF9A 4IKWA 4J4LC 4ZW9A 3N06A 3HMXB 3HOYD 2R7ZD 4A3KD 4PYPA 2OQPA 5EQIA 3PIWA 2D9QA 4PS4A 2H24A 2B8YA 2LMSA 4NEMA 1Y14A 3OG6A 5L6YC 2XUTA 1PW4A 1HWHA 5LQBA 4I77Z 4NN6A 1BGEA 4UVMA 4EXPA 1I1RB 3N0PA 4XNJA
chains in the Genus database with same CATH topology

3BPNA 1Y1WD 2D48A 2KZ1A 1JLIA 4ZS7A 1Z7CA 3QB1A 1HIKA 5TS9A 4A3GD 3QWRB 1ALUA 3TGXB 4A3MD 1N1FA 1IK0A 2HYMB 3VA2A 1BUYA 4BY1D 3LB6B 2Q7NB 3HOWD 1QVNA 3L5WI 2B63D 1ETEA 3BESL 3B5KA 3DUHC 1ITFA 4GRWA 4LRLA 3SE4B 3EW3A 1AU1A 3HHCA 1WU3I 2O26A 1M47A 1HIJA 5C7XA 1B5LA 1D9GA 3LB6A 3INKC 2L3OA 4BXXD 1PGRA 1CSGA 3QB7A 5IYBD 4A3JD 2INTA 3NPZA 4FA8E 1M4BA 3S9DA 1Y6NL 1Z92A 5D70A 5IYCD 4WRLB 5C44D 1FYHA 4NN7A 1P9MB 2JA5D 3HOXD 4A3FD 5D22A 4A3ID 2JA6D 1PW6A 2B8ZA 1NBPA 1EKUA 1BP3A 1EXZA 1RCBA 1RFBA 1PY2A 1EVSA 1BBNA 1ITMA 1BGDA 3Q1SI 3UX9A 2B8XA 1INRA 4A3BD 3PO3D 3NCFA 1Y6KL 5D71A 4DKCA 5IP9D 1A22A 3PIVA 4MHLA 3UF5A 4NI7A 3DI2A 2IL6A 3D85C 3OG4A 1CNT1 4YPGC 2O6IA 3H3VE 1M4CA 3SE3B 3MZGA 1V7MV 4O6KA 1AX8A 1CN4C 1LKIA 3BPLA 2E9WC 2B90A 4BY7D 3QT2C 1HZIA 2ERJD 1FG9A 3HOUD 1YKBA 5IYDD 2R93D 3UEZE 4BBRD 4A93D 1Y6ML 1CYLA 1SCFA 1GA3A 2PSMA 3G9VB 3L5XA 2CYKA 4DOHA 5FLMD 1PVHB 2GMFA 1LK3A 2B91A 4YQXA 5C4XD 1A7MA 1F6FA 3D48P 3H0GD 5D28B 4O9HA 3DI3A 4DKFA 5E4EA 3DGCL 1F45B 1D9CA 3AYHA 3OQ3A 2Z3QA 2C35A 1M48A 3HHRA 1ILKA 1AXIA 4BBSD 1RW5A 2LAGA 1KF9A 5D72A 4EXNA 1IL6A 1V7NV 4NKQC 4J4LC 3HOZD 4NEJA 3NCCA 3N06A 3NCBA 3UF2A 2B5IA 2JA8D 3IRHA 3HMXB 3HOYD 1HULA 2R7ZD 1J7VL 4Z5RD 3EJJA 4DKDA 1EERA 4A3KD 1IARA 1M4AA 4NN5A 3I4MD 3D87A 1BGCA 3G6DA 4CNIC 2Q98A 2OQPA 4ZF7A 3HOVD 2JA7D 3DLQI 3PIWA 1GNCA 3WCYI 5KNHI 5FUCA 4X51A 4A3LD 2D9QA 4YDYI 3I4ND 1M49A 1LQSL 4GS7A 2Z3RA 2H24A 3QAZA 2B8YA 1EMRA 2LMSA 1Y14A 3OG6A 4NEMA 3BPOA 4PS4A 1IRLA 1HUWA 5FHXA 1RHGA 5L6YC 3FKID 1HWHA 1M4RA 4RS1A 2Q14A 1HWGA 1CD9A 1WCMD 1VLKA 2ILKA 5LQBA 4I77Z 4NN6A 1BGEA 3NCEA 1BCNA 1HGUA 2O27A 2L3YA 4EXPA 1I1RB 3N0PA 2VUMD 2R92D 4DKEA 1IJZA 1ITLA 4A3ED 4YUEC 3PO2D 5C3ED 1Y1VD 4NI9A 2B8UA 1ITIA 4A3CD 2XQBA 4A3DD 5IP7D
chains in the Genus database with same CATH homology

#chains in the Genus database with same CATH superfamily
 3BPN A;  2D48 A;  2KZ1 A;  1JLI A;  4ZS7 A;  1Z7C A;  3QB1 A;  1HIK A;  3QWR B;  1ALU A;  1IK0 A;  1N1F A;  2HYM B;  3VA2 A;  1BUY A;  2Q7N B;  1QVN A;  3L5W I;  1ETE A;  3BES L;  3B5K A;  3DUH C;  1ITF A;  4GRW A;  3SE4 B;  3EW3 A;  1AU1 A;  1WU3 I;  2O26 A;  1M47 A;  1HIJ A;  5C7X A;  1B5L A;  1D9G A;  3LB6 A;  3INK C;  2L3O A;  1PGR A;  1CSG A;  3QB7 A;  2INT A;  3NPZ A;  4FA8 E;  1M4B A;  3S9D A;  1Y6N L;  1Z92 A;  5D70 A;  4WRL B;  1FYH A;  1P9M B;  5D22 A;  1PW6 A;  2B8Z A;  1NBP A;  1EKU A;  1BP3 A;  1EXZ A;  1RCB A;  1RFB A;  1PY2 A;  1EVS A;  1BBN A;  1ITM A;  1BGD A;  3Q1S I;  3UX9 A;  2B8X A;  1INR A;  3NCF A;  1Y6K L;  5D71 A;  1A22 A;  3PIV A;  4MHL A;  3UF5 A;  4NI7 A;  2IL6 A;  3D85 C;  1CNT 1;  4YPG C;  1M4C A;  3SE3 B;  3MZG A;  1V7M V;  4O6K A;  1AX8 A;  1CN4 C;  1LKI A;  3BPL A;  2E9W C;  2B90 A;  3QT2 C;  1HZI A;  2ERJ D;  1FG9 A;  1YKB A;  3UEZ E;  1Y6M L;  1CYL A;  1SCF A;  1GA3 A;  3G9V B;  3L5X A;  2CYK A;  4DOH A;  1PVH B;  2GMF A;  1LK3 A;  2B91 A;  4YQX A;  1A7M A;  1F6F A;  3D48 P;  5D28 B;  4O9H A;  5E4E A;  3DGC L;  1F45 B;  1D9C A;  3OQ3 A;  3HHR A;  1M48 A;  1ILK A;  1AXI A;  1RW5 A;  2LAG A;  1KF9 A;  5D72 A;  1IL6 A;  1V7N V;  4NKQ C;  4J4L C;  4NEJ A;  3NCC A;  3N06 A;  3NCB A;  3UF2 A;  2B5I A;  3HMX B;  1HUL A;  1J7V L;  4Z5R D;  3EJJ A;  1EER A;  1IAR A;  1M4A A;  3D87 A;  1BGC A;  3G6D A;  4CNI C;  2Q98 A;  4ZF7 A;  3DLQ I;  3PIW A;  1GNC A;  3WCY I;  5KNH I;  5FUC A;  4X51 A;  2D9Q A;  4YDY I;  1M49 A;  1LQS L;  3QAZ A;  2H24 A;  4PS4 A;  2B8Y A;  1EMR A;  2LMS A;  4NEM A;  5L6Y C;  3BPO A;  5FHX A;  1IRL A;  1HUW A;  1RHG A;  1HWH A;  1M4R A;  4RS1 A;  1HWG A;  1CD9 A;  2ILK A;  1VLK A;  5LQB A;  4I77 Z;  1BGE A;  3NCE A;  1BCN A;  1HGU A;  2O27 A;  2L3Y A;  1I1R B;  3N0P A;  1IJZ A;  1ITL A;  4YUE C;  3LB6 B;  4NI9 A;  2B8U A;  1ITI A; 
#chains in the Genus database with same CATH topology
 1Y1W D;  2Y5Y A;  4J05 A;  1ALU A;  3HOW D;  4D2D A;  1QVN A;  1ITF A;  4GRW A;  3EW3 A;  1AU1 A;  1M47 A;  1B5L A;  1D9G A;  1PGR A;  1CSG A;  4OH3 A;  4LDS A;  3QB7 A;  5IYB D;  4NN7 A;  2JA5 D;  3HOX D;  1PW6 A;  4ZWC A;  1EKU A;  1BP3 A;  1RFB A;  1PY2 A;  3Q1S I;  5A2O A;  1A22 A;  4NI7 A;  3DI2 A;  4YPG C;  1V7M V;  1CN4 C;  2E9W C;  2B90 A;  3QT2 C;  2ERJ D;  2PSM A;  1PVH B;  2B91 A;  4YQX A;  3H0G D;  5E4E A;  1D9C A;  2Z3Q A;  1M48 A;  5D72 A;  1IL6 A;  4QIQ A;  3UF2 A;  2B5I A;  4NN5 A;  4CNI C;  3DLQ I;  4A3L D;  5FUC A;  4ZYR A;  1LQS L;  4GS7 A;  4W6V A;  4JR9 A;  1VLK A;  3NCE A;  1HGU A;  2L3Y A;  2VUM D;  1ITL A;  4A3E D;  3PO2 D;  5C3E D;  3LB6 B;  1Y1V D;  1ITI A;  1JLI A;  5TS9 A;  1HIK A;  1IK0 A;  2HYM B;  1BUY A;  2B63 D;  3BES L;  2V8N A;  3WDO A;  4A3J D;  3NPZ A;  1M4B A;  4WRL B;  5C44 D;  1P9M B;  5D22 A;  4A3I D;  2JA6 D;  1EXZ A;  4GC0 A;  1BBN A;  1ITM A;  3UX9 A;  4APS A;  2B8X A;  4U4W A;  4A3B D;  3PO3 D;  3NCF A;  4DKC A;  4MHL A;  4TPG A;  3OG4 A;  1M4C A;  3MZG A;  4O6K A;  1AX8 A;  3BPL A;  5D58 A;  4TPH A;  3UEZ E;  4BBR D;  1GA3 A;  2CFP A;  3G9V B;  3L5X A;  2CYK A;  4DOH A;  3D48 P;  3DGC L;  1F45 B;  3OQ3 A;  3AYH A;  1AXI A;  2LAG A;  4EXN A;  3HOZ D;  4NKQ C;  5D59 A;  1HUL A;  5C65 A;  1J7V L;  4Z5R D;  3EJJ A;  4DKD A;  1EER A;  1IAR A;  1M4A A;  3I4M D;  3D87 A;  1BGC A;  3G6D A;  4IKX A;  2Q98 A;  3HOV D;  1GNC A;  3WCY I;  5KNH I;  1M49 A;  5GXB A;  2Z3R A;  3QAZ A;  4OAA A;  4YB9 D;  3BPO A;  1HUW A;  1RHG A;  1M4R A;  2Q14 A;  1HWG A;  1CD9 A;  2ILK A;  1BCN A;  2O27 A;  2R92 D;  4DKE A;  2B8U A;  4A3D D;  5IP7 D;  4IKY A;  2KZ1 A;  4D2C A;  3QWR B;  4IU9 A;  3VA2 A;  2Q7N B;  1ETE A;  3B5K A;  3DUH C;  3HHC A;  2O26 A;  1HIJ A;  4LEP A;  3INK C;  3S9D A;  5D70 A;  4GBZ A;  4A3F D;  2CFQ A;  1NBP A;  4U4T A;  1BGD A;  5D71 A;  5IP9 D;  3PIV A;  3UF5 A;  1CNT 1;  2O6I A;  4BY7 D;  1HZI A;  1YKB A;  5IYD D;  2R93 D;  4D2B A;  1CYL A;  1SCF A;  5C4X D;  1LK3 A;  1A7M A;  4IU8 A;  5D28 B;  4O9H A;  3DI3 A;  4DKF A;  1PV6 A;  1ILK A;  1RW5 A;  1V7N V;  4NEJ A;  3NCC A;  3NCB A;  2JA8 D;  3IRH A;  4TPJ A;  4JRE A;  4JA3 A;  4ZF7 A;  2JA7 D;  4X51 A;  4YDY I;  3I4N D;  1EMR A;  5FHX A;  1IRL A;  3FKI D;  4RS1 A;  1WCM D;  3O7P A;  1IJZ A;  4GBY A;  4YUE C;  4NI9 A;  4XNI A;  4A3C D;  2XQB A;  3BPN A;  5A2N A;  2D48 A;  4YBQ A;  4ZS7 A;  1Z7C A;  3QB1 A;  4A3G D;  3O7Q A;  3TGX B;  4A3M D;  1N1F A;  4BY1 D;  3L5W I;  4Q65 A;  4LRL A;  3SE4 B;  5EQH A;  4ZWB A;  1WU3 I;  5C7X A;  4BXX D;  3LB6 A;  2L3O A;  4IKZ A;  4U4V A;  2INT A;  4FA8 E;  1PV7 A;  1Y6N L;  1Z92 A;  5IYC D;  1FYH A;  2B8Z A;  1RCB A;  1EVS A;  1INR A;  1Y6K L;  2IL6 A;  3D85 C;  4IKV A;  5D6K A;  3H3V E;  3SE3 B;  1LKI A;  5EQG A;  3HOU D;  1FG9 A;  4A93 D;  1Y6M L;  5FLM D;  2GMF A;  1F6F A;  2C35 A;  3HHR A;  4BBS D;  1KF9 A;  4IKW A;  4J4L C;  4ZW9 A;  3N06 A;  3HMX B;  3HOY D;  2R7Z D;  4A3K D;  4PYP A;  2OQP A;  5EQI A;  3PIW A;  2D9Q A;  4PS4 A;  2H24 A;  2B8Y A;  2LMS A;  4NEM A;  1Y14 A;  3OG6 A;  5L6Y C;  2XUT A;  1PW4 A;  1HWH A;  5LQB A;  4I77 Z;  4NN6 A;  1BGE A;  4UVM A;  4EXP A;  1I1R B;  3N0P A;  4XNJ A; 
#chains in the Genus database with same CATH homology
 3BPN A;  1Y1W D;  2D48 A;  2KZ1 A;  1JLI A;  4ZS7 A;  1Z7C A;  3QB1 A;  1HIK A;  5TS9 A;  4A3G D;  3QWR B;  1ALU A;  3TGX B;  4A3M D;  1N1F A;  1IK0 A;  2HYM B;  3VA2 A;  1BUY A;  4BY1 D;  3LB6 B;  2Q7N B;  3HOW D;  1QVN A;  3L5W I;  2B63 D;  1ETE A;  3BES L;  3B5K A;  3DUH C;  1ITF A;  4GRW A;  4LRL A;  3SE4 B;  3EW3 A;  1AU1 A;  3HHC A;  1WU3 I;  2O26 A;  1M47 A;  1HIJ A;  5C7X A;  1B5L A;  1D9G A;  3LB6 A;  3INK C;  2L3O A;  4BXX D;  1PGR A;  1CSG A;  3QB7 A;  5IYB D;  4A3J D;  2INT A;  3NPZ A;  4FA8 E;  1M4B A;  3S9D A;  1Y6N L;  1Z92 A;  5D70 A;  5IYC D;  4WRL B;  5C44 D;  1FYH A;  4NN7 A;  1P9M B;  2JA5 D;  3HOX D;  4A3F D;  5D22 A;  4A3I D;  2JA6 D;  1PW6 A;  2B8Z A;  1NBP A;  1EKU A;  1BP3 A;  1EXZ A;  1RCB A;  1RFB A;  1PY2 A;  1EVS A;  1BBN A;  1ITM A;  1BGD A;  3Q1S I;  3UX9 A;  2B8X A;  1INR A;  4A3B D;  3PO3 D;  3NCF A;  1Y6K L;  5D71 A;  4DKC A;  5IP9 D;  1A22 A;  3PIV A;  4MHL A;  3UF5 A;  4NI7 A;  3DI2 A;  2IL6 A;  3D85 C;  3OG4 A;  1CNT 1;  4YPG C;  2O6I A;  3H3V E;  1M4C A;  3SE3 B;  3MZG A;  1V7M V;  4O6K A;  1AX8 A;  1CN4 C;  1LKI A;  3BPL A;  2E9W C;  2B90 A;  4BY7 D;  3QT2 C;  1HZI A;  2ERJ D;  1FG9 A;  3HOU D;  1YKB A;  5IYD D;  2R93 D;  3UEZ E;  4BBR D;  4A93 D;  1Y6M L;  1CYL A;  1SCF A;  1GA3 A;  2PSM A;  3G9V B;  3L5X A;  2CYK A;  4DOH A;  5FLM D;  1PVH B;  2GMF A;  1LK3 A;  2B91 A;  4YQX A;  5C4X D;  1A7M A;  1F6F A;  3D48 P;  3H0G D;  5D28 B;  4O9H A;  3DI3 A;  4DKF A;  5E4E A;  3DGC L;  1F45 B;  1D9C A;  3AYH A;  3OQ3 A;  2Z3Q A;  2C35 A;  1M48 A;  3HHR A;  1ILK A;  1AXI A;  4BBS D;  1RW5 A;  2LAG A;  1KF9 A;  5D72 A;  4EXN A;  1IL6 A;  1V7N V;  4NKQ C;  4J4L C;  3HOZ D;  4NEJ A;  3NCC A;  3N06 A;  3NCB A;  3UF2 A;  2B5I A;  2JA8 D;  3IRH A;  3HMX B;  3HOY D;  1HUL A;  2R7Z D;  1J7V L;  4Z5R D;  3EJJ A;  4DKD A;  1EER A;  4A3K D;  1IAR A;  1M4A A;  4NN5 A;  3I4M D;  3D87 A;  1BGC A;  3G6D A;  4CNI C;  2Q98 A;  2OQP A;  4ZF7 A;  3HOV D;  2JA7 D;  3DLQ I;  3PIW A;  1GNC A;  3WCY I;  5KNH I;  5FUC A;  4X51 A;  4A3L D;  2D9Q A;  4YDY I;  3I4N D;  1M49 A;  1LQS L;  4GS7 A;  2Z3R A;  2H24 A;  3QAZ A;  2B8Y A;  1EMR A;  2LMS A;  1Y14 A;  3OG6 A;  4NEM A;  3BPO A;  4PS4 A;  1IRL A;  1HUW A;  5FHX A;  1RHG A;  5L6Y C;  3FKI D;  1HWH A;  1M4R A;  4RS1 A;  2Q14 A;  1HWG A;  1CD9 A;  1WCM D;  1VLK A;  2ILK A;  5LQB A;  4I77 Z;  4NN6 A;  1BGE A;  3NCE A;  1BCN A;  1HGU A;  2O27 A;  2L3Y A;  4EXP A;  1I1R B;  3N0P A;  2VUM D;  2R92 D;  4DKE A;  1IJZ A;  1ITL A;  4A3E D;  4YUE C;  3PO2 D;  5C3E D;  1Y1V D;  4NI9 A;  2B8U A;  1ITI A;  4A3C D;  2XQB A;  4A3D D;  5IP7 D;

...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)

...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

1PGRA

Total Genus

sequence length

structure length

Chain Sequence

Structure visualization

Chord Diagram

connected with : NaN

pfam database annotations