4J05A

Crystal structure of a eukaryotic phosphate transporter
Total Genus 170
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
170
sequence length
489
structure length
422
Chain Sequence
PQIKLVLLAGVGFFLDAYDLFIINQVAPMLAQVYFPKTGLPAQRQDLMKAAANIGCVVGQVMFGVLGDSFGRKFVYGKELILIIVATIFQMSAPSHWDGNRVLTWITICRVFLGIGIGGDYPMSATVVSDRANIHRRGTLLCFIFANQGWGSFVGSLVTIVTISGFKHRLKSGHTHDVDKAWRILIGLSLIPAFGTLYQRWQEFVAYFSTWNHFRNLLGSMLGWFLVDIAFYGINLNQSVVLAQIGFAGKTGDVYDKLFQLATGNIIVTALGFLPGYYFTLFLIDIVGRKKLQFMGFIMSGLFLAILAGEIDHIGKGPLLACFTFMQFFFNFGANTTTFIVAAELFPTRIRASAHGISAAAGKCGAILSSLVFNQLKAKIGTSAVLWIFFSTCILGFISTFLIDETMGVDPDEKDLEERRAR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of a eukaryotic phosphate transporter.
pubmed doi rcsb
molecule keywords Phosphate transporter
molecule tags Transport protein
source organism Piriformospora indica
total genus 170
structure length 422
sequence length 489
chains with identical sequence B
ec nomenclature
pdb deposition date 2013-01-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00083 Sugar_tr Sugar (and other) transporter
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1250.20 Mainly Alpha Up-down Bundle Growth Hormone; Chain: A; MFS general substrate transporter like domains 4j05A00
4U4TA 4IKXA 1PV7A 4YB9D 4UVMA 2CFPA 4IKYA 4XNIA 4APSA 3O7QA 4JR9A 4ZWBA 4J05A 2V8NA 5C65A 4GBZA 3O7PA 4PYPA 5D58A 4IKZA 4JREA 5D59A 4ZWCA 4U4WA 2XUTA 4IU9A 4LEPA 2CFQA 4YBQA 4TPGA 4TPJA 4IKVA 5A2NA 3WDOA 4U4VA 4LDSA 4ZYRA 4IKWA 4GC0A 4IU8A 5EQGA 1PW4A 4GBYA 5EQHA 4TPHA 4W6VA 4Q65A 5EQIA 5A2OA 4OH3A 5GXBA 4JA3A 4D2CA 2Y5YA 5D6KA 4ZW9A 1PV6A 4QIQA 4D2DA 4OAAA 4D2BA 4XNJA
chains in the Genus database with same CATH superfamily
4U4TA 1RCBA 2O26A 3UF2A 1LK3A 3QAZA 2HYMB 2JA8D 4ZS7A 3AYHA 3HOUD 4EXPA 3DI2A 1BP3A 1P9MB 2JA5D 2IL6A 2JA7D 2Y5YA 3BESL 1A7MA 1ALUA 1PV6A 4DKEA 3D87A 1Y1WD 2V8NA 1RFBA 2C35A 1Y6NL 3H3VE 2B8YA 4TPGA 1N1FA 2B8XA 4IKVA 5A2NA 4ZYRA 3QB1A 1FG9A 3PIWA 4OH3A 4A3MD 4JA3A 2B8UA 2R93D 5E4EA 3NCEA 5C65A 4PYPA 4JREA 4ZWCA 1GA3A 1EERA 4BY1D 1V7NV 1RW5A 2CYKA 5KNHI 4Q65A 2R7ZD 3PO2D 1EVSA 4FA8E 4IKYA 3NPZA 4A3LD 4J05A 4A3CD 4YPGC 1EXZA 2O27A 5IYDD 4IKWA 1INRA 1ETEA 1WCMD 1GNCA 1Y6KL 2D48A 3I4ND 3G9VB 3DLQI 1PV7A 2CFPA 1HULA 4ZWBA 4Z5RD 4O9HA 3LB6A 3O7PA 2O6IA 1ILKA 2XQBA 3L5XA 5C7XA 4NN5A 1BBNA 3UEZE 4I77Z 4A3BD 5IYBD 4GS7A 3O7QA 4A3JD 4BY7D 3Q1SI 3HOZD 1CYLA 1A22A 1WU3I 4NN6A 1YKBA 4TPJA 3L5WI 4DKCA 1PY2A 4GRWA 1AX8A 1EKUA 1M4RA 1ITMA 1BCNA 3FKID 1IRLA 1J7VL 1F45B 5TS9A 4PS4A 4DOHA 2L3OA 5D22A 2GMFA 1HIKA 4A3GD 1M4BA 1ITIA 2H24A 3G6DA 1ITLA 1HUWA 4YUEC 3QT2C 3SE4B 2PSMA 4LRLA 1Z92A 4JR9A 1IJZA 4X51A 4YBQA 1LKIA 1HZIA 1PW4A 3H0GD 4BXXD 4BBSD 1HWGA 3LB6B 3BPOA 4XNJA 1NBPA 2Q7NB 4IKXA 4YB9D 5L6YC 1Y6ML 2Z3RA 3UF5A 1Y1VD 4A3KD 5D59A 4NKQC 4U4WA 3IRHA 1ITFA 3WDOA 4LDSA 5D71A 5FLMD 5EQGA 3QB7A 4NN7A 2LAGA 1D9GA 1Y14A 1AXIA 3HOWD 1CD9A 4XNIA 4A93D 2OQPA 2Q14A 3D48P 5D72A 3INKC 2XUTA 3HMXB 4LEPA 3MZGA 2E9WC 1CSGA 4MHLA 4NEMA 2B8ZA 3UX9A 4A3ID 3DUHC 4GC0A 3S9DA 5FUCA 3HOYD 3HOVD 5D70A 4CNIC 5IP9D 3BPNA 4D2CA 4YQXA 4D2BA 3OG4A 4APSA 3NCBA 3BPLA 3EJJA 4DKDA 2INTA 3PO3D 1M48A 4U4VA 1F6FA 3NCCA 4IU8A 1PVHB 1QVNA 3I4MD 5A2OA 1PGRA 3N06A 1Z7CA 5C4XD 4RS1A 4UVMA 1M47A 1IL6A 1HIJA 4A3FD 4IKZA 1EMRA 3HHRA 1D9CA 4A3DD 3QWRB 1PW6A 1RHGA 2ERJD 4GBYA 5GXBA 4A3ED 2B90A 2B5IA 1M4CA 1BGDA 3HOXD 1V7MV 4IU9A 5IP7D 1JLIA 3DI3A 1KF9A 2B63D 4DKFA 1M4AA 4W6VA 5EQIA 2R92D 3DGCL 3VA2A 3B5KA 1CNT1 2B91A 1BGCA 2LMSA 4NI9A 1BGEA 3EW3A 3TGXB 3N0PA 1LQSL 5EQHA 2JA6D 1CN4C 5LQBA 4QIQA 4WRLB 3OG6A 1AU1A 4NI7A 3OQ3A 3WCYI 4GBZA 5D58A 5C3ED 1FYHA 2L3YA 3SE3B 3D85C 2ILKA 4NEJA 5D28B 2VUMD 1VLKA 3PIVA 4TPHA 1IARA 2D9QA 1I1RB 1B5LA 5IYCD 4J4LC 5D6KA 1IK0A 4D2DA 4OAAA 4YDYI 5C44D 4O6KA 5FHXA 2Z3QA 4BBRD 4ZF7A 1SCFA 1M49A 2KZ1A 1BUYA 2CFQA 3NCFA 1HGUA 1HWHA 3HHCA 4ZW9A 2Q98A 4EXNA
chains in the Genus database with same CATH topology
4U4TA 4IKXA 1PV7A 4YB9D 4UVMA 2CFPA 4IKYA 4XNIA 4APSA 3O7QA 4JR9A 4ZWBA 4J05A 2V8NA 5C65A 4GBZA 3O7PA 4PYPA 5D58A 4IKZA 4JREA 5D59A 4ZWCA 4U4WA 2XUTA 4IU9A 4LEPA 2CFQA 4YBQA 4TPGA 4TPJA 4IKVA 5A2NA 3WDOA 4U4VA 4LDSA 4ZYRA 4IKWA 4GC0A 4IU8A 5EQGA 1PW4A 4GBYA 5EQHA 4TPHA 4W6VA 4Q65A 5EQIA 5A2OA 4OH3A 5GXBA 4JA3A 4D2CA 2Y5YA 5D6KA 4ZW9A 1PV6A 4QIQA 4D2DA 4OAAA 4D2BA 4XNJA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4U4T A;  4IKX A;  1PV7 A;  4YB9 D;  4UVM A;  2CFP A;  4IKY A;  4XNI A;  4APS A;  3O7Q A;  4JR9 A;  4ZWB A;  4J05 A;  2V8N A;  5C65 A;  4GBZ A;  3O7P A;  4PYP A;  5D58 A;  4IKZ A;  4JRE A;  5D59 A;  4ZWC A;  4U4W A;  2XUT A;  4IU9 A;  4LEP A;  2CFQ A;  4YBQ A;  4TPG A;  4TPJ A;  4IKV A;  5A2N A;  3WDO A;  4U4V A;  4LDS A;  4ZYR A;  4IKW A;  4GC0 A;  4IU8 A;  5EQG A;  1PW4 A;  4GBY A;  5EQH A;  4TPH A;  4W6V A;  4Q65 A;  5EQI A;  5A2O A;  4OH3 A;  5GXB A;  4JA3 A;  4D2C A;  2Y5Y A;  5D6K A;  4ZW9 A;  1PV6 A;  4QIQ A;  4D2D A;  4OAA A;  4D2B A;  4XNJ A; 
#chains in the Genus database with same CATH topology
 4U4T A;  1RCB A;  2O26 A;  3UF2 A;  1LK3 A;  3QAZ A;  2HYM B;  2JA8 D;  4ZS7 A;  3AYH A;  3HOU D;  4EXP A;  3DI2 A;  1BP3 A;  1P9M B;  2JA5 D;  2IL6 A;  2JA7 D;  2Y5Y A;  3BES L;  1A7M A;  1ALU A;  1PV6 A;  4DKE A;  3D87 A;  1Y1W D;  2V8N A;  1RFB A;  2C35 A;  1Y6N L;  3H3V E;  2B8Y A;  4TPG A;  1N1F A;  2B8X A;  4IKV A;  5A2N A;  4ZYR A;  3QB1 A;  1FG9 A;  3PIW A;  4OH3 A;  4A3M D;  4JA3 A;  2B8U A;  2R93 D;  5E4E A;  3NCE A;  5C65 A;  4PYP A;  4JRE A;  4ZWC A;  1GA3 A;  1EER A;  4BY1 D;  1V7N V;  1RW5 A;  2CYK A;  5KNH I;  4Q65 A;  2R7Z D;  3PO2 D;  1EVS A;  4FA8 E;  4IKY A;  3NPZ A;  4A3L D;  4J05 A;  4A3C D;  4YPG C;  1EXZ A;  2O27 A;  5IYD D;  4IKW A;  1INR A;  1ETE A;  1WCM D;  1GNC A;  1Y6K L;  2D48 A;  3I4N D;  3G9V B;  3DLQ I;  1PV7 A;  2CFP A;  1HUL A;  4ZWB A;  4Z5R D;  4O9H A;  3LB6 A;  3O7P A;  2O6I A;  1ILK A;  2XQB A;  3L5X A;  5C7X A;  4NN5 A;  1BBN A;  3UEZ E;  4I77 Z;  4A3B D;  5IYB D;  4GS7 A;  3O7Q A;  4A3J D;  4BY7 D;  3Q1S I;  3HOZ D;  1CYL A;  1A22 A;  1WU3 I;  4NN6 A;  1YKB A;  4TPJ A;  3L5W I;  4DKC A;  1PY2 A;  4GRW A;  1AX8 A;  1EKU A;  1M4R A;  1ITM A;  1BCN A;  3FKI D;  1IRL A;  1J7V L;  1F45 B;  5TS9 A;  4PS4 A;  4DOH A;  2L3O A;  5D22 A;  2GMF A;  1HIK A;  4A3G D;  1M4B A;  1ITI A;  2H24 A;  3G6D A;  1ITL A;  1HUW A;  4YUE C;  3QT2 C;  3SE4 B;  2PSM A;  4LRL A;  1Z92 A;  4JR9 A;  1IJZ A;  4X51 A;  4YBQ A;  1LKI A;  1HZI A;  1PW4 A;  3H0G D;  4BXX D;  4BBS D;  1HWG A;  3LB6 B;  3BPO A;  4XNJ A;  1NBP A;  2Q7N B;  4IKX A;  4YB9 D;  5L6Y C;  1Y6M L;  2Z3R A;  3UF5 A;  1Y1V D;  4A3K D;  5D59 A;  4NKQ C;  4U4W A;  3IRH A;  1ITF A;  3WDO A;  4LDS A;  5D71 A;  5FLM D;  5EQG A;  3QB7 A;  4NN7 A;  2LAG A;  1D9G A;  1Y14 A;  1AXI A;  3HOW D;  1CD9 A;  4XNI A;  4A93 D;  2OQP A;  2Q14 A;  3D48 P;  5D72 A;  3INK C;  2XUT A;  3HMX B;  4LEP A;  3MZG A;  2E9W C;  1CSG A;  4MHL A;  4NEM A;  2B8Z A;  3UX9 A;  4A3I D;  3DUH C;  4GC0 A;  3S9D A;  5FUC A;  3HOY D;  3HOV D;  5D70 A;  4CNI C;  5IP9 D;  3BPN A;  4D2C A;  4YQX A;  4D2B A;  3OG4 A;  4APS A;  3NCB A;  3BPL A;  3EJJ A;  4DKD A;  2INT A;  3PO3 D;  1M48 A;  4U4V A;  1F6F A;  3NCC A;  4IU8 A;  1PVH B;  1QVN A;  3I4M D;  5A2O A;  1PGR A;  3N06 A;  1Z7C A;  5C4X D;  4RS1 A;  4UVM A;  1M47 A;  1IL6 A;  1HIJ A;  4A3F D;  4IKZ A;  1EMR A;  3HHR A;  1D9C A;  4A3D D;  3QWR B;  1PW6 A;  1RHG A;  2ERJ D;  4GBY A;  5GXB A;  4A3E D;  2B90 A;  2B5I A;  1M4C A;  1BGD A;  3HOX D;  1V7M V;  4IU9 A;  5IP7 D;  1JLI A;  3DI3 A;  1KF9 A;  2B63 D;  4DKF A;  1M4A A;  4W6V A;  5EQI A;  2R92 D;  3DGC L;  3VA2 A;  3B5K A;  1CNT 1;  2B91 A;  1BGC A;  2LMS A;  4NI9 A;  1BGE A;  3EW3 A;  3TGX B;  3N0P A;  1LQS L;  5EQH A;  2JA6 D;  1CN4 C;  5LQB A;  4QIQ A;  4WRL B;  3OG6 A;  1AU1 A;  4NI7 A;  3OQ3 A;  3WCY I;  4GBZ A;  5D58 A;  5C3E D;  1FYH A;  2L3Y A;  3SE3 B;  3D85 C;  2ILK A;  4NEJ A;  5D28 B;  2VUM D;  1VLK A;  3PIV A;  4TPH A;  1IAR A;  2D9Q A;  1I1R B;  1B5L A;  5IYC D;  4J4L C;  5D6K A;  1IK0 A;  4D2D A;  4OAA A;  4YDY I;  5C44 D;  4O6K A;  5FHX A;  2Z3Q A;  4BBR D;  4ZF7 A;  1SCF A;  1M49 A;  2KZ1 A;  1BUY A;  2CFQ A;  3NCF A;  1HGU A;  1HWH A;  3HHC A;  4ZW9 A;  2Q98 A;  4EXN A; 
#chains in the Genus database with same CATH homology
 4U4T A;  4IKX A;  1PV7 A;  4YB9 D;  4UVM A;  2CFP A;  4IKY A;  4XNI A;  4APS A;  3O7Q A;  4JR9 A;  4ZWB A;  4J05 A;  2V8N A;  5C65 A;  4GBZ A;  3O7P A;  4PYP A;  5D58 A;  4IKZ A;  4JRE A;  5D59 A;  4ZWC A;  4U4W A;  2XUT A;  4IU9 A;  4LEP A;  2CFQ A;  4YBQ A;  4TPG A;  4TPJ A;  4IKV A;  5A2N A;  3WDO A;  4U4V A;  4LDS A;  4ZYR A;  4IKW A;  4GC0 A;  4IU8 A;  5EQG A;  1PW4 A;  4GBY A;  5EQH A;  4TPH A;  4W6V A;  4Q65 A;  5EQI A;  5A2O A;  4OH3 A;  5GXB A;  4JA3 A;  4D2C A;  2Y5Y A;  5D6K A;  4ZW9 A;  1PV6 A;  4QIQ A;  4D2D A;  4OAA A;  4D2B A;  4XNJ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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