3OG4A

The crystal structure of human interferon lambda 1 complexed with its high affinity receptor in space group p21212
Total Genus 48

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
48
sequence length
148
structure length
140
Chain Sequence
SLSPQELASFKKARDALEESLKLKNWSCSSPVFPGNWDLRLLQVRERPVALEAELALTLKVLEAAAGPALEDVLDQPLHTLHHILSQLQACIQPRGRLHHWLHRLQEAPKKESAGCLEASVTFNLFRLLTRDLKYVADGN

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYO1 (49-145)AH1 (25-43)AH3 (89-111)AH4 (126-140)TI1 (55-58)TVIII1 (49-52)3H1 (60-62)3H2 (65-67)AH2 (68-84)TVIII2 (52-55)Updating...
connected with : NaN
molecule tags Cytokine/cytokine receptor
source organism Homo sapiens
publication title Crystal structure of the complex of human interferon-lambda1 with its high affinity receptor interferon-lambdaR1.
pubmed doi rcsb
molecule keywords Interleukin-29
total genus 48
structure length 140
sequence length 148
ec nomenclature
pdb deposition date 2010-08-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF15177 IL28A Interleukin-28A
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.1250.60 Mainly Alpha Up-down Bundle Growth Hormone; Chain: A; Growth Hormone; Chain: A; 3og4A00
3OG4A 3OG6A 3HHCA
chains in the Genus database with same CATH superfamily
4BBRD 5EQIA 4YUEC 3PIVA 1SCFA 3QWRB 1Y1WD 3DGCL 1I1RB 5D6KA 1BBNA 1PW4A 3PO3D 2LAGA 2V8NA 2R93D 5D70A 3SE4B 5C4XD 3QB1A 4A3FD 1JLIA 2Z3RA 3NCEA 4IKZA 4A93D 3HOYD 3D48P 4D2DA 4U4VA 1KF9A 4LRLA 4YDYI 3DLQI 1Y1VD 5L6YC 1GA3A 3D85C 2E9WC 3FKID 3QB7A 3HOXD 4IKXA 1HIKA 4O9HA 1ITLA 2PSMA 4DOHA 1V7MV 1EKUA 1M49A 1RHGA 2D48A 4ZS7A 5GXBA 1CD9A 2Z3QA 5EQGA 2IL6A 5C65A 2B8XA 4A3LD 1AXIA 4DKCA 4Q65A 3UF2A 1WU3I 1CN4C 3I4MD 3O7QA 2HYMB 4PS4A 1HGUA 1EXZA 1M4BA 2XUTA 4EXPA 3PO2D 4A3MD 1M4RA 3DI3A 1ETEA 3DUHC 4NN7A 5IYCD 4QIQA 3NPZA 2CFPA 2CFQA 4LDSA 2VUMD 3I4ND 3TGXB 4EXNA 5C7XA 2O27A 5D71A 4UVMA 3LB6B 5LQBA 4O6KA 3G6DA 1INRA 5A2OA 1VLKA 4TPJA 4YBQA 3HHCA 2L3YA 4A3CD 2B90A 3NCCA 4DKFA 2O6IA 2B63D 1HULA 4APSA 1V7NV 3MZGA 3VA2A 1CNT1 1CSGA 5D22A 1LKIA 4NEJA 3PIWA 4CNIC 1J7VL 1Y6ML 3WDOA 1RW5A 2H24A 1IL6A 5D58A 3HOZD 4J05A 1D9CA 1D9GA 3OG4A 2L3OA 4A3KD 4A3DD 4D2CA 1LQSL 1PW6A 2O26A 1BCNA 1HUWA 3HOWD 1PVHB 2KZ1A 3QAZA 4MHLA 4RS1A 2Q98A 2B8YA 4FA8E 4TPGA 1M48A 5D72A 2JA5D 3O7PA 5FHXA 5FUCA 1NBPA 4GS7A 3UF5A 1HWGA 3H3VE 4W6VA 4D2BA 1AU1A 4NN6A 3INKC 4BBSD 3L5WI 3H0GD 2R7ZD 4IKWA 3L5XA 3S9DA 4Z5RD 5KNHI 4XNJA 5EQHA 1N1FA 1PY2A 1WCMD 1AX8A 1QVNA 3BPLA 3OQ3A 1BP3A 5E4EA 2LMSA 4GBZA 1F45B 1EMRA 4JREA 3D87A 3G9VB 3HMXB 1P9MB 3UEZE 1ITFA 4BY1D 4GRWA 2B8UA 4OH3A 1YKBA 4JA3A 1BUYA 1EVSA 1HWHA 5D59A 3WCYI 3HOUD 4A3ED 1IJZA 4A3GD 3Q1SI 3B5KA 1IRLA 4A3JD 1M47A 3N0PA 1PV6A 3SE3B 4BXXD 4X51A 4IKVA 1HZIA 3HOVD 1RFBA 4PYPA 5D28B 2B8ZA 5C44D 2JA8D 1FYHA 1ITIA 1Z7CA 3DI2A 4A3BD 4JR9A 1ILKA 1BGCA 4YB9D 1IK0A 1PGRA 4ZWBA 1M4AA 3AYHA 1IARA 2INTA 1BGDA 4DKDA 5FLMD 4ZW9A 2OQPA 5TS9A 4LEPA 2JA6D 4IU9A 1Y6KL 1RCBA 1FG9A 5IYBD 3OG6A 3UX9A 1F6FA 2B91A 5A2NA 2XQBA 4NI9A 3NCBA 1ITMA 4NN5A 4BY7D 4GBYA 4XNIA 5IP7D 4ZYRA 4WRLB 1M4CA 5C3ED 2Q14A 2Q7NB 4A3ID 4I77Z 1Z92A 1EERA 4NKQC 4DKEA 1PV7A 3IRHA 4TPHA 1GNCA 2CYKA 5IYDD 4GC0A 4ZF7A 5IP9D 4IU8A 4J4LC 4U4WA 1B5LA 1CYLA 4YPGC 3NCFA 1ALUA 1Y6NL 4U4TA 1HIJA 4NI7A 1A22A 2GMFA 1A7MA 3EJJA 2C35A 3EW3A 3LB6A 2B5IA 1Y14A 3HHRA 4YQXA 4IKYA 4OAAA 2ILKA 3BPOA 2D9QA 2Y5YA 2ERJD 4NEMA 2JA7D 4ZWCA 3BPNA 3N06A 1BGEA 2R92D 3QT2C 1LK3A 3BESL
chains in the Genus database with same CATH topology
1F45B 1F6FA 2B91A 4O6KA 4YUEC 3G6DA 4BBRD 1EMRA 3PIVA 1SCFA 1INRA 3QWRB 1Y1WD 1VLKA 3HHCA 2L3YA 4A3CD 2B90A 2XQBA 3D87A 3NCCA 3G9VB 4DKFA 4NI9A 2O6IA 3DGCL 1I1RB 3HMXB 1P9MB 3NCBA 1ITMA 3UEZE 2B63D 1HULA 4NN5A 4BY7D 4BY1D 1ITFA 4GRWA 2B8UA 1BBNA 1YKBA 1V7NV 3MZGA 3VA2A 1BUYA 1EVSA 1HWHA 3PO3D 2LAGA 1CNT1 1CSGA 2R93D 5D22A 1LKIA 4NEJA 5D70A 3PIWA 5IP7D 3SE4B 4CNIC 5C4XD 3WCYI 3QB1A 4WRLB 3HOUD 1M4CA 5E4EA 5C3ED 1J7VL 4A3FD 1JLIA 1Y6ML 2Q14A 2Q7NB 4A3ED 1IJZA 1RW5A 4A3ID 2Z3RA 3NCEA 3Q1SI 4I77Z 4A3GD 3B5KA 1Z92A 4A93D 1IRLA 4A3JD 1EERA 4NKQC 2H24A 1M47A 3N0PA 1IL6A 3HOYD 3D48P 4DKEA 3HOZD 3SE3B 1D9CA 3IRHA 4BXXD 1D9GA 3OG4A 4X51A 1KF9A 4LRLA 1HZIA 2L3OA 4A3KD 4YDYI 3DLQI 3HOVD 1GNCA 4A3DD 1RFBA 1Y1VD 5D28B 1LQSL 2CYKA 5IYDD 1PW6A 5L6YC 1GA3A 2B8ZA 5C44D 3D85C 4ZF7A 5IP9D 2O26A 2E9WC 3FKID 4J4LC 3QB7A 1FYHA 2JA8D 1BCNA 3HOXD 1HUWA 1B5LA 1CYLA 1ITIA 3HOWD 4YPGC 3UX9A 1Z7CA 3DI2A 3NCFA 1HIKA 4O9HA 4A3BD 1ITLA 1PVHB 2KZ1A 3QAZA 4MHLA 2PSMA 2Q98A 2B8YA 4RS1A 4FA8E 4DOHA 1V7MV 1M48A 1EKUA 5D72A 1M49A 2JA5D 1RHGA 1ILKA 2D48A 4ZS7A 1ALUA 1Y6NL 5FHXA 1CD9A 2Z3QA 5FUCA 1BGCA 1HIJA 2IL6A 1NBPA 1IK0A 4NI7A 1PGRA 1A22A 2B8XA 4GS7A 3UF5A 2GMFA 4A3LD 1AXIA 1A7MA 1M4AA 3EJJA 1HWGA 2C35A 3H3VE 3AYHA 1IARA 3I4ND 2INTA 4DKCA 3EW3A 3LB6A 1BGDA 4DKDA 5FLMD 2B5IA 2OQPA 1Y14A 3UF2A 3HHRA 1AU1A 4NN6A 1WU3I 1CN4C 3INKC 4YQXA 3I4MD 4BBSD 2HYMB 3L5WI 4PS4A 3H0GD 2R7ZD 1HGUA 1EXZA 1M4BA 4EXPA 2ILKA 5TS9A 3PO2D 3BPOA 2JA6D 2D9QA 3L5XA 3S9DA 4A3MD 1M4RA 3DI3A 4Z5RD 2ERJD 4NEMA 2JA7D 1ETEA 3DUHC 4NN7A 5IYCD 3BPNA 3NPZA 3N06A 5KNHI 1BGEA 1Y6KL 2VUMD 1N1FA 3TGXB 1PY2A 4EXNA 1RCBA 3QT2C 2R92D 5C7XA 2O27A 1LK3A 5D71A 1FG9A 1WCMD 1AX8A 1QVNA 3BPLA 5IYBD 3BESL 3LB6B 1BP3A 3OG6A 3OQ3A 2LMSA 5LQBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OG4 A;  3OG6 A;  3HHC A; 
#chains in the Genus database with same CATH topology
 4BBR D;  5EQI A;  4YUE C;  3PIV A;  1SCF A;  3QWR B;  1Y1W D;  3DGC L;  1I1R B;  5D6K A;  1BBN A;  1PW4 A;  3PO3 D;  2LAG A;  2V8N A;  2R93 D;  5D70 A;  3SE4 B;  5C4X D;  3QB1 A;  4A3F D;  1JLI A;  2Z3R A;  3NCE A;  4IKZ A;  4A93 D;  3HOY D;  3D48 P;  4D2D A;  4U4V A;  1KF9 A;  4LRL A;  4YDY I;  3DLQ I;  1Y1V D;  5L6Y C;  1GA3 A;  3D85 C;  2E9W C;  3FKI D;  3QB7 A;  3HOX D;  4IKX A;  1HIK A;  4O9H A;  1ITL A;  2PSM A;  4DOH A;  1V7M V;  1EKU A;  1M49 A;  1RHG A;  2D48 A;  4ZS7 A;  5GXB A;  1CD9 A;  2Z3Q A;  5EQG A;  2IL6 A;  5C65 A;  2B8X A;  4A3L D;  1AXI A;  4DKC A;  4Q65 A;  3UF2 A;  1WU3 I;  1CN4 C;  3I4M D;  3O7Q A;  2HYM B;  4PS4 A;  1HGU A;  1EXZ A;  1M4B A;  2XUT A;  4EXP A;  3PO2 D;  4A3M D;  1M4R A;  3DI3 A;  1ETE A;  3DUH C;  4NN7 A;  5IYC D;  4QIQ A;  3NPZ A;  2CFP A;  2CFQ A;  4LDS A;  2VUM D;  3I4N D;  3TGX B;  4EXN A;  5C7X A;  2O27 A;  5D71 A;  4UVM A;  3LB6 B;  5LQB A;  4O6K A;  3G6D A;  1INR A;  5A2O A;  1VLK A;  4TPJ A;  4YBQ A;  3HHC A;  2L3Y A;  4A3C D;  2B90 A;  3NCC A;  4DKF A;  2O6I A;  2B63 D;  1HUL A;  4APS A;  1V7N V;  3MZG A;  3VA2 A;  1CNT 1;  1CSG A;  5D22 A;  1LKI A;  4NEJ A;  3PIW A;  4CNI C;  1J7V L;  1Y6M L;  3WDO A;  1RW5 A;  2H24 A;  1IL6 A;  5D58 A;  3HOZ D;  4J05 A;  1D9C A;  1D9G A;  3OG4 A;  2L3O A;  4A3K D;  4A3D D;  4D2C A;  1LQS L;  1PW6 A;  2O26 A;  1BCN A;  1HUW A;  3HOW D;  1PVH B;  2KZ1 A;  3QAZ A;  4MHL A;  4RS1 A;  2Q98 A;  2B8Y A;  4FA8 E;  4TPG A;  1M48 A;  5D72 A;  2JA5 D;  3O7P A;  5FHX A;  5FUC A;  1NBP A;  4GS7 A;  3UF5 A;  1HWG A;  3H3V E;  4W6V A;  4D2B A;  1AU1 A;  4NN6 A;  3INK C;  4BBS D;  3L5W I;  3H0G D;  2R7Z D;  4IKW A;  3L5X A;  3S9D A;  4Z5R D;  5KNH I;  4XNJ A;  5EQH A;  1N1F A;  1PY2 A;  1WCM D;  1AX8 A;  1QVN A;  3BPL A;  3OQ3 A;  1BP3 A;  5E4E A;  2LMS A;  4GBZ A;  1F45 B;  1EMR A;  4JRE A;  3D87 A;  3G9V B;  3HMX B;  1P9M B;  3UEZ E;  1ITF A;  4BY1 D;  4GRW A;  2B8U A;  4OH3 A;  1YKB A;  4JA3 A;  1BUY A;  1EVS A;  1HWH A;  5D59 A;  3WCY I;  3HOU D;  4A3E D;  1IJZ A;  4A3G D;  3Q1S I;  3B5K A;  1IRL A;  4A3J D;  1M47 A;  3N0P A;  1PV6 A;  3SE3 B;  4BXX D;  4X51 A;  4IKV A;  1HZI A;  3HOV D;  1RFB A;  4PYP A;  5D28 B;  2B8Z A;  5C44 D;  2JA8 D;  1FYH A;  1ITI A;  1Z7C A;  3DI2 A;  4A3B D;  4JR9 A;  1ILK A;  1BGC A;  4YB9 D;  1IK0 A;  1PGR A;  4ZWB A;  1M4A A;  3AYH A;  1IAR A;  2INT A;  1BGD A;  4DKD A;  5FLM D;  4ZW9 A;  2OQP A;  5TS9 A;  4LEP A;  2JA6 D;  4IU9 A;  1Y6K L;  1RCB A;  1FG9 A;  5IYB D;  3OG6 A;  3UX9 A;  1F6F A;  2B91 A;  5A2N A;  2XQB A;  4NI9 A;  3NCB A;  1ITM A;  4NN5 A;  4BY7 D;  4GBY A;  4XNI A;  5IP7 D;  4ZYR A;  4WRL B;  1M4C A;  5C3E D;  2Q14 A;  2Q7N B;  4A3I D;  4I77 Z;  1Z92 A;  1EER A;  4NKQ C;  4DKE A;  1PV7 A;  3IRH A;  4TPH A;  1GNC A;  2CYK A;  5IYD D;  4GC0 A;  4ZF7 A;  5IP9 D;  4IU8 A;  4J4L C;  4U4W A;  1B5L A;  1CYL A;  4YPG C;  3NCF A;  1ALU A;  1Y6N L;  4U4T A;  1HIJ A;  4NI7 A;  1A22 A;  2GMF A;  1A7M A;  3EJJ A;  2C35 A;  3EW3 A;  3LB6 A;  2B5I A;  1Y14 A;  3HHR A;  4YQX A;  4IKY A;  4OAA A;  2ILK A;  3BPO A;  2D9Q A;  2Y5Y A;  2ERJ D;  4NEM A;  2JA7 D;  4ZWC A;  3BPN A;  3N06 A;  1BGE A;  2R92 D;  3QT2 C;  1LK3 A;  3BES L; 
#chains in the Genus database with same CATH homology
 1F45 B;  1F6F A;  2B91 A;  4O6K A;  4YUE C;  3G6D A;  4BBR D;  1EMR A;  3PIV A;  1SCF A;  1INR A;  3QWR B;  1Y1W D;  1VLK A;  3HHC A;  2L3Y A;  4A3C D;  2B90 A;  2XQB A;  3D87 A;  3NCC A;  3G9V B;  4DKF A;  4NI9 A;  2O6I A;  3DGC L;  1I1R B;  3HMX B;  1P9M B;  3NCB A;  1ITM A;  3UEZ E;  2B63 D;  1HUL A;  4NN5 A;  4BY7 D;  4BY1 D;  1ITF A;  4GRW A;  2B8U A;  1BBN A;  1YKB A;  1V7N V;  3MZG A;  3VA2 A;  1BUY A;  1EVS A;  1HWH A;  3PO3 D;  2LAG A;  1CNT 1;  1CSG A;  2R93 D;  5D22 A;  1LKI A;  4NEJ A;  5D70 A;  3PIW A;  5IP7 D;  3SE4 B;  4CNI C;  5C4X D;  3WCY I;  3QB1 A;  4WRL B;  3HOU D;  1M4C A;  5E4E A;  5C3E D;  1J7V L;  4A3F D;  1JLI A;  1Y6M L;  2Q14 A;  2Q7N B;  4A3E D;  1IJZ A;  1RW5 A;  4A3I D;  2Z3R A;  3NCE A;  3Q1S I;  4I77 Z;  4A3G D;  3B5K A;  1Z92 A;  4A93 D;  1IRL A;  4A3J D;  1EER A;  4NKQ C;  2H24 A;  1M47 A;  3N0P A;  1IL6 A;  3HOY D;  3D48 P;  4DKE A;  3HOZ D;  3SE3 B;  1D9C A;  3IRH A;  4BXX D;  1D9G A;  3OG4 A;  4X51 A;  1KF9 A;  4LRL A;  1HZI A;  2L3O A;  4A3K D;  4YDY I;  3DLQ I;  3HOV D;  1GNC A;  4A3D D;  1RFB A;  1Y1V D;  5D28 B;  1LQS L;  2CYK A;  5IYD D;  1PW6 A;  5L6Y C;  1GA3 A;  2B8Z A;  5C44 D;  3D85 C;  4ZF7 A;  5IP9 D;  2O26 A;  2E9W C;  3FKI D;  4J4L C;  3QB7 A;  1FYH A;  2JA8 D;  1BCN A;  3HOX D;  1HUW A;  1B5L A;  1CYL A;  1ITI A;  3HOW D;  4YPG C;  3UX9 A;  1Z7C A;  3DI2 A;  3NCF A;  1HIK A;  4O9H A;  4A3B D;  1ITL A;  1PVH B;  2KZ1 A;  3QAZ A;  4MHL A;  2PSM A;  2Q98 A;  2B8Y A;  4RS1 A;  4FA8 E;  4DOH A;  1V7M V;  1M48 A;  1EKU A;  5D72 A;  1M49 A;  2JA5 D;  1RHG A;  1ILK A;  2D48 A;  4ZS7 A;  1ALU A;  1Y6N L;  5FHX A;  1CD9 A;  2Z3Q A;  5FUC A;  1BGC A;  1HIJ A;  2IL6 A;  1NBP A;  1IK0 A;  4NI7 A;  1PGR A;  1A22 A;  2B8X A;  4GS7 A;  3UF5 A;  2GMF A;  4A3L D;  1AXI A;  1A7M A;  1M4A A;  3EJJ A;  1HWG A;  2C35 A;  3H3V E;  3AYH A;  1IAR A;  3I4N D;  2INT A;  4DKC A;  3EW3 A;  3LB6 A;  1BGD A;  4DKD A;  5FLM D;  2B5I A;  2OQP A;  1Y14 A;  3UF2 A;  3HHR A;  1AU1 A;  4NN6 A;  1WU3 I;  1CN4 C;  3INK C;  4YQX A;  3I4M D;  4BBS D;  2HYM B;  3L5W I;  4PS4 A;  3H0G D;  2R7Z D;  1HGU A;  1EXZ A;  1M4B A;  4EXP A;  2ILK A;  5TS9 A;  3PO2 D;  3BPO A;  2JA6 D;  2D9Q A;  3L5X A;  3S9D A;  4A3M D;  1M4R A;  3DI3 A;  4Z5R D;  2ERJ D;  4NEM A;  2JA7 D;  1ETE A;  3DUH C;  4NN7 A;  5IYC D;  3BPN A;  3NPZ A;  3N06 A;  5KNH I;  1BGE A;  1Y6K L;  2VUM D;  1N1F A;  3TGX B;  1PY2 A;  4EXN A;  1RCB A;  3QT2 C;  2R92 D;  5C7X A;  2O27 A;  1LK3 A;  5D71 A;  1FG9 A;  1WCM D;  1AX8 A;  1QVN A;  3BPL A;  5IYB D;  3BES L;  3LB6 B;  1BP3 A;  3OG6 A;  3OQ3 A;  2LMS A;  5LQB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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