The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.
Total Genus |
35
|
sequence length |
122
|
structure length |
115
|
Chain Sequence |
GQDRHMIRMRQLIDIVDQLKNYVNDLVPEFLPAPEDVETNCEWSAFSCFQKAQLKSANTGNNERIINVSIKKLKRKPPSTHRLTCPSCDSYEKKPPKEFLERFKSLLQKMIHQHL
|
The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.
After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.
| publication title |
The crystal structure of the interleukin 21 receptor bound to interleukin 21 reveals that a sugar chain interacting with the WSXWS motif is an integral part of the interleukin 21 receptor.
pubmed doi rcsb |
| molecule keywords |
Interleukin-21 receptor
|
| molecule tags |
Cytokine/cytokine receptor
|
| source organism |
Homo sapiens
|
| total genus |
35
|
| structure length |
115
|
| sequence length |
122
|
| chains with identical sequence |
D, F, H, J, L, N, P
|
| ec nomenclature | |
| pdb deposition date | 2011-08-18 |
Image from the rcsb pdb (www.rcsb.org)
cath code
| Class | Architecture | Topology | Homology | Domain |
|---|---|---|---|---|---|
| Mainly Alpha | Up-down Bundle | Growth Hormone; Chain: A; | Growth Hormone; Chain: A; |
#chains in the Genus database with same CATH superfamily 4GS7 A; 2PSM A; 2Z3Q A; 3TGX B; 2Z3R A; 2OQP A; 2XQB A; #chains in the Genus database with same CATH topology 1I1R B; 4XNI A; 1PVH B; 5EQI A; 5A2O A; 4TPH A; 2Y5Y A; 1HZI A; 4PYP A; 3O7Q A; 4YB9 D; 4J05 A; 1V7N V; 1BP3 A; 2INT A; 1V7M V; 3BPN A; 3FKI D; 1M48 A; 4D2B A; 1PW6 A; 4BY1 D; 4UVM A; 2JA5 D; 3G6D A; 2GMF A; 1HGU A; 1M49 A; 3UX9 A; 2JA7 D; 3S9D A; 2C35 A; 1CSG A; 5D71 A; 3G9V B; 1BGC A; 5D59 A; 4A3E D; 4GBZ A; 1HIK A; 4A93 D; 1A22 A; 3NCE A; 4WRL B; 4FA8 E; 4GBY A; 5C44 D; 4JRE A; 1ITI A; 4NI9 A; 1IK0 A; 2XQB A; 1EER A; 1Y1W D; 1LQS L; 1F45 B; 5EQH A; 5FUC A; 4A3K D; 1F6F A; 4U4W A; 3BPO A; 4A3C D; 2Z3R A; 4A3B D; 2PSM A; 2B5I A; 2Q98 A; 4A3D D; 4NEJ A; 3WDO A; 3HHR A; 1SCF A; 3NCC A; 3NCB A; 2Z3Q A; 5A2N A; 4IKX A; 3HOV D; 1N1F A; 3VA2 A; 1CD9 A; 2LAG A; 4O9H A; 1FYH A; 3HHC A; 1Y1V D; 4ZYR A; 2E9W C; 1PGR A; 3HOU D; 1PV7 A; 4DKD A; 4JA3 A; 4IKZ A; 4EXP A; 1JLI A; 4NI7 A; 3HOW D; 4A3J D; 5D70 A; 1YKB A; 5FLM D; 4QIQ A; 4IKV A; 3DUH C; 4BY7 D; 4ZS7 A; 3QB7 A; 4A3I D; 3H3V E; 1ITF A; 5IYC D; 4IU8 A; 2R92 D; 2H24 A; 3EW3 A; 4Q65 A; 3HOZ D; 1A7M A; 4EXN A; 5D22 A; 4U4T A; 2VUM D; 3DI3 A; 2B8X A; 4ZWB A; 1HUL A; 2OQP A; 3PO3 D; 2HYM B; 2B8U A; 4NN5 A; 4GC0 A; 1M4C A; 1FG9 A; 5GXB A; 1WU3 I; 2R93 D; 1IRL A; 4PS4 A; 3O7P A; 3MZG A; 3B5K A; 5D28 B; 3OQ3 A; 1BGE A; 5IYD D; 3D85 C; 3UEZ E; 5C7X A; 3BPL A; 4NKQ C; 1AX8 A; 1RFB A; 2B8Y A; 4APS A; 1EMR A; 3H0G D; 4TPJ A; 2V8N A; 4U4V A; 3DGC L; 1RHG A; 1Y14 A; 1IL6 A; 3HMX B; 3LB6 A; 4RS1 A; 2Q14 A; 1PW4 A; 4DKE A; 4IKW A; 3NCF A; 2D48 A; 1M47 A; 2CFP A; 4I77 Z; 2D9Q A; 1HWG A; 3QAZ A; 1J7V L; 3DI2 A; 1LK3 A; 3WCY I; 1HUW A; 3SE4 B; 4DKF A; 2CFQ A; 5IP9 D; 5L6Y C; 2L3Y A; 1AXI A; 1PY2 A; 5EQG A; 1WCM D; 3UF5 A; 3OG6 A; 2L3O A; 3QWR B; 4ZW9 A; 2B63 D; 4A3G D; 1LKI A; 1CYL A; 3UF2 A; 3HOX D; 2KZ1 A; 2B90 A; 3DLQ I; 1RCB A; 3N06 A; 3PIV A; 3AYH A; 4XNJ A; 4LEP A; 5D72 A; 3N0P A; 4NN6 A; 1GNC A; 1AU1 A; 1M4B A; 1M4R A; 4BBR D; 2ERJ D; 5KNH I; 2O6I A; 4NN7 A; 4TPG A; 1Y6N L; 5IP7 D; 1D9G A; 4Z5R D; 4YQX A; 1Y6K L; 5C4X D; 1BGD A; 4OH3 A; 1M4A A; 4A3M D; 4LDS A; 2B8Z A; 4BXX D; 3INK C; 4YBQ A; 5TS9 A; 1B5L A; 2ILK A; 1IAR A; 5FHX A; 4DOH A; 3HOY D; 1ILK A; 2O26 A; 4NEM A; 3TGX B; 1NBP A; 4DKC A; 1P9M B; 1ETE A; 4LRL A; 3L5X A; 1Z92 A; 5C3E D; 1ITM A; 1HWH A; 4IKY A; 4YUE C; 4JR9 A; 3LB6 B; 5D58 A; 1EXZ A; 1QVN A; 2XUT A; 1KF9 A; 1EVS A; 1BCN A; 1GA3 A; 1Y6M L; 2Q7N B; 4ZWC A; 1ITL A; 2R7Z D; 3QT2 C; 4A3F D; 3I4M D; 4W6V A; 3Q1S I; 4J4L C; 3I4N D; 5LQB A; 2CYK A; 3NPZ A; 3PO2 D; 1CNT 1; 3L5W I; 1PV6 A; 4D2C A; 1ALU A; 2IL6 A; 4GS7 A; 3SE3 B; 4YDY I; 4MHL A; 4GRW A; 1IJZ A; 4X51 A; 3PIW A; 1VLK A; 1RW5 A; 3OG4 A; 4O6K A; 1D9C A; 4ZF7 A; 2O27 A; 5C65 A; 4OAA A; 2JA6 D; 2JA8 D; 3D48 P; 1HIJ A; 3QB1 A; 1CN4 C; 1BUY A; 3D87 A; 5D6K A; 1Z7C A; 2B91 A; 3BES L; 4D2D A; 4A3L D; 3IRH A; 5IYB D; 2LMS A; 1EKU A; 4BBS D; 5E4E A; 4YPG C; 3EJJ A; 4IU9 A; 1INR A; 1BBN A; 4CNI C; #chains in the Genus database with same CATH homology 1I1R B; 1PVH B; 1ETE A; 4LRL A; 3L5X A; 1Y1V D; 3HMX B; 1Z92 A; 1HZI A; 5C3E D; 3LB6 A; 1ITM A; 2E9W C; 1HWH A; 4RS1 A; 1V7N V; 3HHC A; 4YUE C; 1BP3 A; 1PGR A; 2Q14 A; 4DKE A; 2INT A; 1V7M V; 3LB6 B; 3HOU D; 3BPN A; 4DKD A; 3NCF A; 3FKI D; 4DKC A; 2D48 A; 1M48 A; 1M47 A; 4I77 Z; 1PW6 A; 4EXP A; 1JLI A; 4BY1 D; 1EXZ A; 1QVN A; 4NI7 A; 2D9Q A; 1HWG A; 1KF9 A; 3HOW D; 3QAZ A; 4A3J D; 1J7V L; 1EVS A; 3DI2 A; 1LK3 A; 1YKB A; 5D70 A; 3WCY I; 5IYB D; 5FLM D; 2JA5 D; 3G6D A; 2GMF A; 1HGU A; 1HUW A; 1M49 A; 3DUH C; 3SE4 B; 3UX9 A; 4DKF A; 5IP9 D; 4BY7 D; 5L6Y C; 1BCN A; 1GA3 A; 2JA7 D; 2L3Y A; 4ZS7 A; 3QB7 A; 4CNI C; 3S9D A; 4A3I D; 3H3V E; 2C35 A; 1CSG A; 1Y6M L; 5D71 A; 2Q7N B; 1AXI A; 1PY2 A; 1WCM D; 3G9V B; 3UF5 A; 1ITF A; 3OG6 A; 1BGC A; 1ITL A; 2L3O A; 3QWR B; 5IYC D; 2R7Z D; 4BBS D; 2B63 D; 3QT2 C; 4A3F D; 1LKI A; 4A3E D; 3I4M D; 4A3G D; 1CYL A; 2R92 D; 2H24 A; 3EW3 A; 3UF2 A; 3HOX D; 3HOZ D; 1HIK A; 3Q1S I; 1A7M A; 2KZ1 A; 4J4L C; 3I4N D; 2B90 A; 5LQB A; 2CYK A; 4EXN A; 5D22 A; 3NPZ A; 3DLQ I; 1RCB A; 3N06 A; 3PO2 D; 1CNT 1; 3L5W I; 4A93 D; 1A22 A; 3DI3 A; 2VUM D; 1ALU A; 3PIV A; 2IL6 A; 4GS7 A; 3SE3 B; 3AYH A; 3NCE A; 4YDY I; 4WRL B; 4FA8 E; 2B8X A; 4MHL A; 5C44 D; 4GRW A; 1HUL A; 2OQP A; 3PO3 D; 5D72 A; 3N0P A; 1ITI A; 1IJZ A; 4NI9 A; 1IK0 A; 4NN6 A; 1GNC A; 1AU1 A; 3PIW A; 1M4B A; 1VLK A; 2HYM B; 4X51 A; 2B8U A; 1M4R A; 4NN5 A; 4BBR D; 1M4C A; 2ERJ D; 1FG9 A; 2XQB A; 5KNH I; 1RW5 A; 1EER A; 1Y1W D; 2O6I A; 3OG4 A; 4O6K A; 4NN7 A; 1D9C A; 4ZF7 A; 1WU3 I; 2R93 D; 2O27 A; 1LQS L; 1F45 B; 5IP7 D; 1Y6N L; 1D9G A; 4Z5R D; 4YQX A; 2JA6 D; 1IRL A; 5FUC A; 1Y6K L; 4A3K D; 4PS4 A; 2JA8 D; 3D48 P; 5C4X D; 1F6F A; 3BPO A; 4A3C D; 2Z3R A; 1HIJ A; 1BGD A; 3QB1 A; 1CN4 C; 4A3B D; 3MZG A; 1BUY A; 3B5K A; 1M4A A; 2PSM A; 3D87 A; 2B5I A; 2Q98 A; 4A3D D; 4A3M D; 5D28 B; 4NEJ A; 2B8Z A; 4BXX D; 3HHR A; 1Z7C A; 1SCF A; 3OQ3 A; 3INK C; 1BGE A; 5TS9 A; 3D85 C; 3NCC A; 3NCB A; 3UEZ E; 5IYD D; 2Z3Q A; 5C7X A; 2B91 A; 3BPL A; 1B5L A; 3BES L; 4A3L D; 2ILK A; 1IAR A; 4NKQ C; 5FHX A; 4DOH A; 1AX8 A; 1RFB A; 3IRH A; 3HOY D; 3HOV D; 2B8Y A; 1N1F A; 1EMR A; 1ILK A; 2O26 A; 2LMS A; 1CD9 A; 1EKU A; 4NEM A; 3TGX B; 1NBP A; 2LAG A; 3H0G D; 4O9H A; 3VA2 A; 5E4E A; 4YPG C; 3EJJ A; 1FYH A; 3DGC L; 1INR A; 1BBN A; 1RHG A; 1Y14 A; 1P9M B; 1IL6 A;
#similar chains in the Genus database (?% sequence similarity) ...loading similar chains, please wait... #similar chains, but unknotted ...loading similar chains, please wait... #similar chains in the pdb database (?% sequence similarity) ...loading similar chains, please wait...
