3O5VA

The crystal structure of the creatinase/prolidase n-terminal domain of an x-pro dipeptidase from streptococcus pyogenes to 1.85a
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
131
structure length
131
Chain Sequence
SNAKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPHERQLFLFVYHDLAPVLFVPALEVARASQAISFPVFGYVDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIFSGQFNNLTPYVQGM
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Streptococcus pyogenes m1 gas
publication title The Crystal Structure of the Creatinase/Prolidase N-terminal domain of an X-PRO dipeptidase from Streptococcus pyogenes to 1.85A
rcsb
molecule keywords X-PRO dipeptidase
total genus 35
structure length 131
sequence length 131
chains with identical sequence B
ec nomenclature ec 3.4.13.9: Xaa-Pro dipeptidase.
pdb deposition date 2010-07-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3o5vA00
2BWXA 1A16A 2BH3A 5FCFA 5E5BA 5CDVA 1WBQA 3I7MA 3L24A 2BWVA 3CB5A 1PV9A 3IG4A 2V3XA 2ZSGA 2BWWA 2BN7A 2BWYA 3PEBA 1JAWA 4S00A 4RZYA 4ZNGA 2OKNA 2V3ZA 4PV4A 3BIQA 3O5VA 3Q6DA 3QOCA 3RVAA 2HOWA 5FCHA 2IW2A 3CB6A 4ZWUA 1M35A 1N51A 3IL0A 4FKCA 1WL6A 4S01A 1W7VA 5CIKA 4EGEA 4ZWOA 4B28A 4RGZ1 4S2TP 1CHMA 3L7GA 1WLRA 2BWUA 1W2MA 4R60A 2BWSA 5CDLA 2V3YA 2BHAA 3OVKA 1KP0A 4QR8A 4S2RP 5E2CA 2BHCA 4ZWPA 3OOOA 5CNXA 5CE6A 4RZZA 1WL9A 3BIPA 2BHBA 1WN1A 3CTZA 2BHDA 3BITA 3PN9A 1WY2A 5CDEA 2BWTA
chains in the Genus database with same CATH superfamily
2BWXA 1A16A 2BH3A 5FCFA 5E5BA 5CDVA 1WBQA 3I7MA 3L24A 2BWVA 3CB5A 1PV9A 3IG4A 2V3XA 2ZSGA 2BWWA 2BN7A 2BWYA 3PEBA 1JAWA 4S00A 4RZYA 4ZNGA 2OKNA 2V3ZA 4PV4A 3BIQA 3O5VA 3Q6DA 3QOCA 3RVAA 2HOWA 5FCHA 2IW2A 3CB6A 4ZWUA 1M35A 1N51A 3IL0A 4FKCA 1WL6A 4S01A 1W7VA 5CIKA 4EGEA 4ZWOA 4B28A 4RGZ1 4S2TP 1CHMA 3L7GA 1WLRA 2BWUA 1W2MA 4R60A 2BWSA 5CDLA 2V3YA 2BHAA 3OVKA 1KP0A 4QR8A 4S2RP 5E2CA 2BHCA 4ZWPA 3OOOA 5CNXA 5CE6A 4RZZA 1WL9A 3BIPA 2BHBA 1WN1A 3CTZA 2BHDA 3BITA 3PN9A 1WY2A 5CDEA 2BWTA
chains in the Genus database with same CATH topology
2BWXA 1A16A 2BH3A 5FCFA 5E5BA 5CDVA 1WBQA 3I7MA 3L24A 2BWVA 3CB5A 1PV9A 3IG4A 2V3XA 2ZSGA 2BWWA 2BN7A 2BWYA 3PEBA 1JAWA 4S00A 4RZYA 4ZNGA 2OKNA 2V3ZA 4PV4A 3BIQA 3O5VA 3Q6DA 3QOCA 3RVAA 2HOWA 5FCHA 2IW2A 3CB6A 4ZWUA 1M35A 1N51A 3IL0A 4FKCA 1WL6A 4S01A 1W7VA 5CIKA 4EGEA 4ZWOA 4B28A 4RGZ1 4S2TP 1CHMA 3L7GA 1WLRA 2BWUA 1W2MA 4R60A 2BWSA 5CDLA 2V3YA 2BHAA 3OVKA 1KP0A 4QR8A 4S2RP 5E2CA 2BHCA 4ZWPA 3OOOA 5CNXA 5CE6A 4RZZA 1WL9A 3BIPA 2BHBA 1WN1A 3CTZA 2BHDA 3BITA 3PN9A 1WY2A 5CDEA 2BWTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BWX A;  1A16 A;  2BH3 A;  5FCF A;  5E5B A;  5CDV A;  1WBQ A;  3I7M A;  3L24 A;  2BWV A;  3CB5 A;  1PV9 A;  3IG4 A;  2V3X A;  2ZSG A;  2BWW A;  2BN7 A;  2BWY A;  3PEB A;  1JAW A;  4S00 A;  4RZY A;  4ZNG A;  2OKN A;  2V3Z A;  4PV4 A;  3BIQ A;  3O5V A;  3Q6D A;  3QOC A;  3RVA A;  2HOW A;  5FCH A;  2IW2 A;  3CB6 A;  4ZWU A;  1M35 A;  1N51 A;  3IL0 A;  4FKC A;  1WL6 A;  4S01 A;  1W7V A;  5CIK A;  4EGE A;  4ZWO A;  4B28 A;  4RGZ 1;  4S2T P;  1CHM A;  3L7G A;  1WLR A;  2BWU A;  1W2M A;  4R60 A;  2BWS A;  5CDL A;  2V3Y A;  2BHA A;  3OVK A;  1KP0 A;  4QR8 A;  4S2R P;  5E2C A;  2BHC A;  4ZWP A;  3OOO A;  5CNX A;  5CE6 A;  4RZZ A;  1WL9 A;  3BIP A;  2BHB A;  1WN1 A;  3CTZ A;  2BHD A;  3BIT A;  3PN9 A;  1WY2 A;  5CDE A;  2BWT A; 
#chains in the Genus database with same CATH topology
 2BWX A;  1A16 A;  2BH3 A;  5FCF A;  5E5B A;  5CDV A;  1WBQ A;  3I7M A;  3L24 A;  2BWV A;  3CB5 A;  1PV9 A;  3IG4 A;  2V3X A;  2ZSG A;  2BWW A;  2BN7 A;  2BWY A;  3PEB A;  1JAW A;  4S00 A;  4RZY A;  4ZNG A;  2OKN A;  2V3Z A;  4PV4 A;  3BIQ A;  3O5V A;  3Q6D A;  3QOC A;  3RVA A;  2HOW A;  5FCH A;  2IW2 A;  3CB6 A;  4ZWU A;  1M35 A;  1N51 A;  3IL0 A;  4FKC A;  1WL6 A;  4S01 A;  1W7V A;  5CIK A;  4EGE A;  4ZWO A;  4B28 A;  4RGZ 1;  4S2T P;  1CHM A;  3L7G A;  1WLR A;  2BWU A;  1W2M A;  4R60 A;  2BWS A;  5CDL A;  2V3Y A;  2BHA A;  3OVK A;  1KP0 A;  4QR8 A;  4S2R P;  5E2C A;  2BHC A;  4ZWP A;  3OOO A;  5CNX A;  5CE6 A;  4RZZ A;  1WL9 A;  3BIP A;  2BHB A;  1WN1 A;  3CTZ A;  2BHD A;  3BIT A;  3PN9 A;  1WY2 A;  5CDE A;  2BWT A; 
#chains in the Genus database with same CATH homology
 2BWX A;  1A16 A;  2BH3 A;  5FCF A;  5E5B A;  5CDV A;  1WBQ A;  3I7M A;  3L24 A;  2BWV A;  3CB5 A;  1PV9 A;  3IG4 A;  2V3X A;  2ZSG A;  2BWW A;  2BN7 A;  2BWY A;  3PEB A;  1JAW A;  4S00 A;  4RZY A;  4ZNG A;  2OKN A;  2V3Z A;  4PV4 A;  3BIQ A;  3O5V A;  3Q6D A;  3QOC A;  3RVA A;  2HOW A;  5FCH A;  2IW2 A;  3CB6 A;  4ZWU A;  1M35 A;  1N51 A;  3IL0 A;  4FKC A;  1WL6 A;  4S01 A;  1W7V A;  5CIK A;  4EGE A;  4ZWO A;  4B28 A;  4RGZ 1;  4S2T P;  1CHM A;  3L7G A;  1WLR A;  2BWU A;  1W2M A;  4R60 A;  2BWS A;  5CDL A;  2V3Y A;  2BHA A;  3OVK A;  1KP0 A;  4QR8 A;  4S2R P;  5E2C A;  2BHC A;  4ZWP A;  3OOO A;  5CNX A;  5CE6 A;  4RZZ A;  1WL9 A;  3BIP A;  2BHB A;  1WN1 A;  3CTZ A;  2BHD A;  3BIT A;  3PN9 A;  1WY2 A;  5CDE A;  2BWT A; 
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