3O5VA

The crystal structure of the creatinase/prolidase n-terminal domain of an x-pro dipeptidase from streptococcus pyogenes to 1.85a
Total Genus 35
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
35
sequence length
131
structure length
131
Chain Sequence
SNAKLDQIRLYLDQKGAELAIFSDPVTINYLTGFFCDPHERQLFLFVYHDLAPVLFVPALEVARASQAISFPVFGYVDSENPWEKIKAVLPNTAAKTIYAEFDHLNVNKFHGLQTIFSGQFNNLTPYVQGM
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords X-PRO dipeptidase
publication title The Crystal Structure of the Creatinase/Prolidase N-terminal domain of an X-PRO dipeptidase from Streptococcus pyogenes to 1.85A
rcsb
source organism Streptococcus pyogenes m1 gas
molecule tags Hydrolase
total genus 35
structure length 131
sequence length 131
chains with identical sequence B
ec nomenclature ec 3.4.13.9: Xaa-Pro dipeptidase.
pdb deposition date 2010-07-28
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3o5vA00
4QR8A 3OOOA 2V3XA 2BWUA 3Q6DA 2BHBA 1M35A 3L7GA 4ZWPA 3RVAA 5FCHA 3CTZA 1A16A 4ZNGA 2BWYA 5CNXA 4ZWUA 5CIKA 1CHMA 2HOWA 1WL9A 1WBQA 4RZZA 4EGEA 5CDVA 2BWVA 2BHDA 5CDEA 1WLRA 5E2CA 2BWWA 3PN9A 1W2MA 4S00A 4R60A 1N51A 2BWTA 3IL0A 3PEBA 2BWSA 3O5VA 2BWXA 2BHCA 4PV4A 4RGZ1 3OVKA 5FCFA 3L24A 2IW2A 3IG4A 3BIQA 2OKNA 1KP0A 5CDLA 2ZSGA 3CB6A 3CB5A 3BITA 2BHAA 1PV9A 1W7VA 4S2TP 4S01A 4FKCA 4S2RP 3BIPA 2BN7A 2V3YA 1JAWA 5E5BA 2V3ZA 3QOCA 4RZYA 4B28A 2BH3A 3I7MA 4ZWOA 1WY2A 5CE6A 1WN1A 1WL6A
chains in the Genus database with same CATH superfamily
4QR8A 3OOOA 2V3XA 2BWUA 3Q6DA 2BHBA 1M35A 3L7GA 4ZWPA 3RVAA 5FCHA 3CTZA 1A16A 4ZNGA 2BWYA 5CNXA 4ZWUA 5CIKA 1CHMA 2HOWA 1WL9A 1WBQA 4RZZA 4EGEA 5CDVA 2BWVA 2BHDA 5CDEA 1WLRA 5E2CA 2BWWA 3PN9A 1W2MA 4S00A 4R60A 1N51A 2BWTA 3IL0A 3PEBA 2BWSA 3O5VA 2BWXA 2BHCA 4PV4A 4RGZ1 3OVKA 5FCFA 3L24A 2IW2A 3IG4A 3BIQA 2OKNA 1KP0A 5CDLA 2ZSGA 3CB6A 3CB5A 3BITA 2BHAA 1PV9A 1W7VA 4S2TP 4S01A 4FKCA 4S2RP 3BIPA 2BN7A 2V3YA 1JAWA 5E5BA 2V3ZA 3QOCA 4RZYA 4B28A 2BH3A 3I7MA 4ZWOA 1WY2A 5CE6A 1WN1A 1WL6A
chains in the Genus database with same CATH topology
4QR8A 3OOOA 2V3XA 2BWUA 3Q6DA 2BHBA 1M35A 3L7GA 4ZWPA 3RVAA 5FCHA 3CTZA 1A16A 4ZNGA 2BWYA 5CNXA 4ZWUA 5CIKA 1CHMA 2HOWA 1WL9A 1WBQA 4RZZA 4EGEA 5CDVA 2BWVA 2BHDA 5CDEA 1WLRA 5E2CA 2BWWA 3PN9A 1W2MA 4S00A 4R60A 1N51A 2BWTA 3IL0A 3PEBA 2BWSA 3O5VA 2BWXA 2BHCA 4PV4A 4RGZ1 3OVKA 5FCFA 3L24A 2IW2A 3IG4A 3BIQA 2OKNA 1KP0A 5CDLA 2ZSGA 3CB6A 3CB5A 3BITA 2BHAA 1PV9A 1W7VA 4S2TP 4S01A 4FKCA 4S2RP 3BIPA 2BN7A 2V3YA 1JAWA 5E5BA 2V3ZA 3QOCA 4RZYA 4B28A 2BH3A 3I7MA 4ZWOA 1WY2A 5CE6A 1WN1A 1WL6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4QR8 A;  3OOO A;  2V3X A;  2BWU A;  3Q6D A;  2BHB A;  1M35 A;  3L7G A;  4ZWP A;  3RVA A;  5FCH A;  3CTZ A;  1A16 A;  4ZNG A;  2BWY A;  5CNX A;  4ZWU A;  5CIK A;  1CHM A;  2HOW A;  1WL9 A;  1WBQ A;  4RZZ A;  4EGE A;  5CDV A;  2BWV A;  2BHD A;  5CDE A;  1WLR A;  5E2C A;  2BWW A;  3PN9 A;  1W2M A;  4S00 A;  4R60 A;  1N51 A;  2BWT A;  3IL0 A;  3PEB A;  2BWS A;  3O5V A;  2BWX A;  2BHC A;  4PV4 A;  4RGZ 1;  3OVK A;  5FCF A;  3L24 A;  2IW2 A;  3IG4 A;  3BIQ A;  2OKN A;  1KP0 A;  5CDL A;  2ZSG A;  3CB6 A;  3CB5 A;  3BIT A;  2BHA A;  1PV9 A;  1W7V A;  4S2T P;  4S01 A;  4FKC A;  4S2R P;  3BIP A;  2BN7 A;  2V3Y A;  1JAW A;  5E5B A;  2V3Z A;  3QOC A;  4RZY A;  4B28 A;  2BH3 A;  3I7M A;  4ZWO A;  1WY2 A;  5CE6 A;  1WN1 A;  1WL6 A; 
#chains in the Genus database with same CATH topology
 4QR8 A;  3OOO A;  2V3X A;  2BWU A;  3Q6D A;  2BHB A;  1M35 A;  3L7G A;  4ZWP A;  3RVA A;  5FCH A;  3CTZ A;  1A16 A;  4ZNG A;  2BWY A;  5CNX A;  4ZWU A;  5CIK A;  1CHM A;  2HOW A;  1WL9 A;  1WBQ A;  4RZZ A;  4EGE A;  5CDV A;  2BWV A;  2BHD A;  5CDE A;  1WLR A;  5E2C A;  2BWW A;  3PN9 A;  1W2M A;  4S00 A;  4R60 A;  1N51 A;  2BWT A;  3IL0 A;  3PEB A;  2BWS A;  3O5V A;  2BWX A;  2BHC A;  4PV4 A;  4RGZ 1;  3OVK A;  5FCF A;  3L24 A;  2IW2 A;  3IG4 A;  3BIQ A;  2OKN A;  1KP0 A;  5CDL A;  2ZSG A;  3CB6 A;  3CB5 A;  3BIT A;  2BHA A;  1PV9 A;  1W7V A;  4S2T P;  4S01 A;  4FKC A;  4S2R P;  3BIP A;  2BN7 A;  2V3Y A;  1JAW A;  5E5B A;  2V3Z A;  3QOC A;  4RZY A;  4B28 A;  2BH3 A;  3I7M A;  4ZWO A;  1WY2 A;  5CE6 A;  1WN1 A;  1WL6 A; 
#chains in the Genus database with same CATH homology
 4QR8 A;  3OOO A;  2V3X A;  2BWU A;  3Q6D A;  2BHB A;  1M35 A;  3L7G A;  4ZWP A;  3RVA A;  5FCH A;  3CTZ A;  1A16 A;  4ZNG A;  2BWY A;  5CNX A;  4ZWU A;  5CIK A;  1CHM A;  2HOW A;  1WL9 A;  1WBQ A;  4RZZ A;  4EGE A;  5CDV A;  2BWV A;  2BHD A;  5CDE A;  1WLR A;  5E2C A;  2BWW A;  3PN9 A;  1W2M A;  4S00 A;  4R60 A;  1N51 A;  2BWT A;  3IL0 A;  3PEB A;  2BWS A;  3O5V A;  2BWX A;  2BHC A;  4PV4 A;  4RGZ 1;  3OVK A;  5FCF A;  3L24 A;  2IW2 A;  3IG4 A;  3BIQ A;  2OKN A;  1KP0 A;  5CDL A;  2ZSG A;  3CB6 A;  3CB5 A;  3BIT A;  2BHA A;  1PV9 A;  1W7V A;  4S2T P;  4S01 A;  4FKC A;  4S2R P;  3BIP A;  2BN7 A;  2V3Y A;  1JAW A;  5E5B A;  2V3Z A;  3QOC A;  4RZY A;  4B28 A;  2BH3 A;  3I7M A;  4ZWO A;  1WY2 A;  5CE6 A;  1WN1 A;  1WL6 A; 
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