1W7VA

Znmg substituted aminopeptidase p from e. coli
Total Genus 158
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
440
structure length
439
Chain Sequence
SEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENEEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARKQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Hydrolase
source organism Escherichia coli
publication title Structural and Functional Implications of Metal Ion Selection in Aminopeptidase P, a Metalloprotease with a Dinuclear Metal Center.
pubmed doi rcsb
molecule keywords XAA-PRO AMINOPEPTIDASE
total genus 158
structure length 439
sequence length 440
chains with identical sequence B, C, D
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2004-09-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF05195 AMP_N Aminopeptidase P, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 1w7vA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 1w7vA02
3OOOA 2OKNA 3TB5A 4U71A 4FO7A 3BIPA 2DFIA 1C22A 4IU6A 1N51A 2BWWA 3OVKA 2P98A 3CB6A 2ZSGA 2GG0A 3IU8A 5E5BA 3O5VA 4IPAA 2EVMA 2Q93A 4RZZA 2BB7A 2BH3A 4PNCA 2GTXA 1YW9A 3MATA 1C27A 4FLLA 1PV9A 1XNZA 3MX6A 4U1BA 5D6EA 3PKEA 1BN5A 4B28A 2BHCA 1M35A 2BWUA 3RORA 2Q96A 1XGOA 4FLIA 4U6CA 2Q94A 1C23A 1YW8A 2P9AA 4IF7A 4Z7MA 2V3YA 2V6CA 2BWXA 1B59A 3PEBA 5E2CA 1YVMA 4OOKA 4ZWPA 1B6AA 4IDYA 1C21A 1WBQA 2IW2A 2GU5A 2P99A 3PKCA 3D27A 4A6WA 4U76A 3PKBA 3QOCA 3L24A 5FCFA 2GGBA 4FUKA 4A6VA 4ZWOA 1QZYA 2EVOA 5CNXA 2GG3A 3PKDA 4IECA 5JHUA 2BWYA 2B3KA 1WY2A 5CIKA 2OAZA 3MR1A 2BWSA 2GG5A 1KQ0A 2GG7A 5D6FA 2GG9A 4JUQA 2V3XA 5CE6A 2Q92A 4KM3A 1MATA 3PKAA 1R5HA 2B3LA 2GZ5A 5CDLA 2GU6A 4PV4A 1WL9A 2GG8A 4IKUA 1XGSA 4EGEA 2Q95A 4QR8A 4HXXA 4IKRA 1KP0A 1A16A 4ZNGA 2HOWA 1CHMA 1Y1NA 1XGMA 1WL6A 2V3ZA 1C24A 4U73A 2BWVA 1QXZA 1W2MA 5FCHA 2NQ6A 3BITA 1XGNA 4U69A 2G6PA 4U6EA 3I7MA 4U70A 3FM3A 2GG2A 5CDVA 4U6JA 2BHBA 3IL0A 2Q8KA 4FO8A 4S2RP 1YJ3A 4ZWUA 1W7VA 1QXYA 3FMRA 3IU9A 3TAVA 4S00A 1YW7A 1BOAA 2GGCA 2ADUA 2MATA 2GU7A 1WLRA 4U6WA 4U6ZA 3FMQA 1R5GA 1WN1A 4R60A 4RGZ1 5JI6A 2BWTA 3S6BA 2EA2A 5CDEA 1KQ9A 3Q6DA 1WKMA 3CB5A 3CTZA 4MATA 3IU7A 5CLSA 2BHAA 2EVCA 4RZYA 4U75A 5JFRA 2BHDA 2GA2A 4FLKA 3PN9A 2BN7A 2B3HA 1R58A 1JAWA 2NQ7A 4FLJA 1QXWA 4S2TP 3IG4A 2GU4A 3RVAA 3BIQA 2EA4A 4IKTA 4IKSA 4S01A 3L7GA 4FKCA 1O0XA
chains in the Genus database with same CATH superfamily
3OOOA 2OKNA 3TB5A 4U71A 4FO7A 3BIPA 2DFIA 1C22A 4IU6A 1N51A 2BWWA 3OVKA 2P98A 3CB6A 2ZSGA 2GG0A 3IU8A 5E5BA 3O5VA 4IPAA 2EVMA 2Q93A 4RZZA 2BB7A 2BH3A 4PNCA 2GTXA 1YW9A 3MATA 1C27A 4FLLA 1PV9A 1XNZA 3MX6A 4U1BA 5D6EA 3PKEA 1BN5A 4B28A 2BHCA 1M35A 2BWUA 3RORA 2Q96A 1XGOA 4FLIA 4U6CA 2Q94A 1C23A 1YW8A 2P9AA 4IF7A 4Z7MA 2V3YA 2V6CA 2BWXA 1B59A 3PEBA 5E2CA 1YVMA 4OOKA 4ZWPA 1B6AA 4IDYA 1C21A 1WBQA 2IW2A 2GU5A 2P99A 3PKCA 3D27A 4A6WA 4U76A 3PKBA 3QOCA 3L24A 5FCFA 2GGBA 4FUKA 4A6VA 4ZWOA 1QZYA 2EVOA 5CNXA 2GG3A 3PKDA 4IECA 5JHUA 2BWYA 2B3KA 1WY2A 5CIKA 2OAZA 3MR1A 2BWSA 2GG5A 1KQ0A 2GG7A 5D6FA 2GG9A 4JUQA 2V3XA 5CE6A 2Q92A 4KM3A 1MATA 3PKAA 1R5HA 2B3LA 2GZ5A 5CDLA 2GU6A 4PV4A 1WL9A 2GG8A 4IKUA 1XGSA 4EGEA 2Q95A 4QR8A 4HXXA 4IKRA 1KP0A 1A16A 4ZNGA 2HOWA 1CHMA 1Y1NA 1XGMA 1WL6A 2V3ZA 1C24A 4U73A 2BWVA 1QXZA 1W2MA 5FCHA 2NQ6A 3BITA 1XGNA 4U69A 2G6PA 4U6EA 3I7MA 4U70A 3FM3A 2GG2A 5CDVA 4U6JA 2BHBA 3IL0A 2Q8KA 4FO8A 4S2RP 1YJ3A 4ZWUA 1W7VA 1QXYA 3FMRA 3IU9A 3TAVA 4S00A 1YW7A 1BOAA 2GGCA 2ADUA 2MATA 2GU7A 1WLRA 4U6WA 4U6ZA 3FMQA 1R5GA 1WN1A 4R60A 4RGZ1 5JI6A 2BWTA 3S6BA 2EA2A 5CDEA 1KQ9A 3Q6DA 1WKMA 3CB5A 3CTZA 4MATA 3IU7A 5CLSA 2BHAA 2EVCA 4RZYA 4U75A 5JFRA 2BHDA 2GA2A 4FLKA 3PN9A 2BN7A 2B3HA 1R58A 1JAWA 2NQ7A 4FLJA 1QXWA 4S2TP 3IG4A 2GU4A 3RVAA 3BIQA 2EA4A 4IKTA 4IKSA 4S01A 3L7GA 4FKCA 1O0XA
chains in the Genus database with same CATH topology
3OOOA 2OKNA 3TB5A 4U71A 4FO7A 3BIPA 2DFIA 1C22A 4IU6A 1N51A 2BWWA 3OVKA 2P98A 3CB6A 2ZSGA 2GG0A 3IU8A 5E5BA 3O5VA 4IPAA 2EVMA 2Q93A 4RZZA 2BB7A 2BH3A 4PNCA 2GTXA 1YW9A 3MATA 1C27A 4FLLA 1PV9A 1XNZA 3MX6A 4U1BA 5D6EA 3PKEA 1BN5A 4B28A 2BHCA 1M35A 2BWUA 3RORA 2Q96A 1XGOA 4FLIA 4U6CA 2Q94A 1C23A 1YW8A 2P9AA 4IF7A 4Z7MA 2V3YA 2V6CA 2BWXA 1B59A 3PEBA 5E2CA 1YVMA 4OOKA 4ZWPA 1B6AA 4IDYA 1C21A 1WBQA 2IW2A 2GU5A 2P99A 3PKCA 3D27A 4A6WA 4U76A 3PKBA 3QOCA 3L24A 5FCFA 2GGBA 4FUKA 4A6VA 4ZWOA 1QZYA 2EVOA 5CNXA 2GG3A 3PKDA 4IECA 5JHUA 2BWYA 2B3KA 1WY2A 5CIKA 2OAZA 3MR1A 2BWSA 2GG5A 1KQ0A 2GG7A 5D6FA 2GG9A 4JUQA 2V3XA 5CE6A 2Q92A 4KM3A 1MATA 3PKAA 1R5HA 2B3LA 2GZ5A 5CDLA 2GU6A 4PV4A 1WL9A 2GG8A 4IKUA 1XGSA 4EGEA 2Q95A 4QR8A 4HXXA 4IKRA 1KP0A 1A16A 4ZNGA 2HOWA 1CHMA 1Y1NA 1XGMA 1WL6A 2V3ZA 1C24A 4U73A 2BWVA 1QXZA 1W2MA 5FCHA 2NQ6A 3BITA 1XGNA 4U69A 2G6PA 4U6EA 3I7MA 4U70A 3FM3A 2GG2A 5CDVA 4U6JA 2BHBA 3IL0A 2Q8KA 4FO8A 4S2RP 1YJ3A 4ZWUA 1W7VA 1QXYA 3FMRA 3IU9A 3TAVA 4S00A 1YW7A 1BOAA 2GGCA 2ADUA 2MATA 2GU7A 1WLRA 4U6WA 4U6ZA 3FMQA 1R5GA 1WN1A 4R60A 4RGZ1 5JI6A 2BWTA 3S6BA 2EA2A 5CDEA 1KQ9A 3Q6DA 1WKMA 3CB5A 3CTZA 4MATA 3IU7A 5CLSA 2BHAA 2EVCA 4RZYA 4U75A 5JFRA 2BHDA 2GA2A 4FLKA 3PN9A 2BN7A 2B3HA 1R58A 1JAWA 2NQ7A 4FLJA 1QXWA 4S2TP 3IG4A 2GU4A 3RVAA 3BIQA 2EA4A 4IKTA 4IKSA 4S01A 3L7GA 4FKCA 1O0XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3OOO A;  2OKN A;  3TB5 A;  4U71 A;  4FO7 A;  3BIP A;  2DFI A;  1C22 A;  4IU6 A;  1N51 A;  2BWW A;  3OVK A;  2P98 A;  3CB6 A;  2ZSG A;  2GG0 A;  3IU8 A;  5E5B A;  3O5V A;  4IPA A;  2EVM A;  2Q93 A;  4RZZ A;  2BB7 A;  2BH3 A;  4PNC A;  2GTX A;  1YW9 A;  3MAT A;  1C27 A;  4FLL A;  1PV9 A;  1XNZ A;  3MX6 A;  4U1B A;  5D6E A;  3PKE A;  1BN5 A;  4B28 A;  2BHC A;  1M35 A;  2BWU A;  3ROR A;  2Q96 A;  1XGO A;  4FLI A;  4U6C A;  2Q94 A;  1C23 A;  1YW8 A;  2P9A A;  4IF7 A;  4Z7M A;  2V3Y A;  2V6C A;  2BWX A;  1B59 A;  3PEB A;  5E2C A;  1YVM A;  4OOK A;  4ZWP A;  1B6A A;  4IDY A;  1C21 A;  1WBQ A;  2IW2 A;  2GU5 A;  2P99 A;  3PKC A;  3D27 A;  4A6W A;  4U76 A;  3PKB A;  3QOC A;  3L24 A;  5FCF A;  2GGB A;  4FUK A;  4A6V A;  4ZWO A;  1QZY A;  2EVO A;  5CNX A;  2GG3 A;  3PKD A;  4IEC A;  5JHU A;  2BWY A;  2B3K A;  1WY2 A;  5CIK A;  2OAZ A;  3MR1 A;  2BWS A;  2GG5 A;  1KQ0 A;  2GG7 A;  5D6F A;  2GG9 A;  4JUQ A;  2V3X A;  5CE6 A;  2Q92 A;  4KM3 A;  1MAT A;  3PKA A;  1R5H A;  2B3L A;  2GZ5 A;  5CDL A;  2GU6 A;  4PV4 A;  1WL9 A;  2GG8 A;  4IKU A;  1XGS A;  4EGE A;  2Q95 A;  4QR8 A;  4HXX A;  4IKR A;  1KP0 A;  1A16 A;  4ZNG A;  2HOW A;  1CHM A;  1Y1N A;  1XGM A;  1WL6 A;  2V3Z A;  1C24 A;  4U73 A;  2BWV A;  1QXZ A;  1W2M A;  5FCH A;  2NQ6 A;  3BIT A;  1XGN A;  4U69 A;  2G6P A;  4U6E A;  3I7M A;  4U70 A;  3FM3 A;  2GG2 A;  5CDV A;  4U6J A;  2BHB A;  3IL0 A;  2Q8K A;  4FO8 A;  4S2R P;  1YJ3 A;  4ZWU A;  1W7V A;  1QXY A;  3FMR A;  3IU9 A;  3TAV A;  4S00 A;  1YW7 A;  1BOA A;  2GGC A;  2ADU A;  2MAT A;  2GU7 A;  1WLR A;  4U6W A;  4U6Z A;  3FMQ A;  1R5G A;  1WN1 A;  4R60 A;  4RGZ 1;  5JI6 A;  2BWT A;  3S6B A;  2EA2 A;  5CDE A;  1KQ9 A;  3Q6D A;  1WKM A;  3CB5 A;  3CTZ A;  4MAT A;  3IU7 A;  5CLS A;  2BHA A;  2EVC A;  4RZY A;  4U75 A;  5JFR A;  2BHD A;  2GA2 A;  4FLK A;  3PN9 A;  2BN7 A;  2B3H A;  1R58 A;  1JAW A;  2NQ7 A;  4FLJ A;  1QXW A;  4S2T P;  3IG4 A;  2GU4 A;  3RVA A;  3BIQ A;  2EA4 A;  4IKT A;  4IKS A;  4S01 A;  3L7G A;  4FKC A;  1O0X A; 
#chains in the Genus database with same CATH topology
 3OOO A;  2OKN A;  3TB5 A;  4U71 A;  4FO7 A;  3BIP A;  2DFI A;  1C22 A;  4IU6 A;  1N51 A;  2BWW A;  3OVK A;  2P98 A;  3CB6 A;  2ZSG A;  2GG0 A;  3IU8 A;  5E5B A;  3O5V A;  4IPA A;  2EVM A;  2Q93 A;  4RZZ A;  2BB7 A;  2BH3 A;  4PNC A;  2GTX A;  1YW9 A;  3MAT A;  1C27 A;  4FLL A;  1PV9 A;  1XNZ A;  3MX6 A;  4U1B A;  5D6E A;  3PKE A;  1BN5 A;  4B28 A;  2BHC A;  1M35 A;  2BWU A;  3ROR A;  2Q96 A;  1XGO A;  4FLI A;  4U6C A;  2Q94 A;  1C23 A;  1YW8 A;  2P9A A;  4IF7 A;  4Z7M A;  2V3Y A;  2V6C A;  2BWX A;  1B59 A;  3PEB A;  5E2C A;  1YVM A;  4OOK A;  4ZWP A;  1B6A A;  4IDY A;  1C21 A;  1WBQ A;  2IW2 A;  2GU5 A;  2P99 A;  3PKC A;  3D27 A;  4A6W A;  4U76 A;  3PKB A;  3QOC A;  3L24 A;  5FCF A;  2GGB A;  4FUK A;  4A6V A;  4ZWO A;  1QZY A;  2EVO A;  5CNX A;  2GG3 A;  3PKD A;  4IEC A;  5JHU A;  2BWY A;  2B3K A;  1WY2 A;  5CIK A;  2OAZ A;  3MR1 A;  2BWS A;  2GG5 A;  1KQ0 A;  2GG7 A;  5D6F A;  2GG9 A;  4JUQ A;  2V3X A;  5CE6 A;  2Q92 A;  4KM3 A;  1MAT A;  3PKA A;  1R5H A;  2B3L A;  2GZ5 A;  5CDL A;  2GU6 A;  4PV4 A;  1WL9 A;  2GG8 A;  4IKU A;  1XGS A;  4EGE A;  2Q95 A;  4QR8 A;  4HXX A;  4IKR A;  1KP0 A;  1A16 A;  4ZNG A;  2HOW A;  1CHM A;  1Y1N A;  1XGM A;  1WL6 A;  2V3Z A;  1C24 A;  4U73 A;  2BWV A;  1QXZ A;  1W2M A;  5FCH A;  2NQ6 A;  3BIT A;  1XGN A;  4U69 A;  2G6P A;  4U6E A;  3I7M A;  4U70 A;  3FM3 A;  2GG2 A;  5CDV A;  4U6J A;  2BHB A;  3IL0 A;  2Q8K A;  4FO8 A;  4S2R P;  1YJ3 A;  4ZWU A;  1W7V A;  1QXY A;  3FMR A;  3IU9 A;  3TAV A;  4S00 A;  1YW7 A;  1BOA A;  2GGC A;  2ADU A;  2MAT A;  2GU7 A;  1WLR A;  4U6W A;  4U6Z A;  3FMQ A;  1R5G A;  1WN1 A;  4R60 A;  4RGZ 1;  5JI6 A;  2BWT A;  3S6B A;  2EA2 A;  5CDE A;  1KQ9 A;  3Q6D A;  1WKM A;  3CB5 A;  3CTZ A;  4MAT A;  3IU7 A;  5CLS A;  2BHA A;  2EVC A;  4RZY A;  4U75 A;  5JFR A;  2BHD A;  2GA2 A;  4FLK A;  3PN9 A;  2BN7 A;  2B3H A;  1R58 A;  1JAW A;  2NQ7 A;  4FLJ A;  1QXW A;  4S2T P;  3IG4 A;  2GU4 A;  3RVA A;  3BIQ A;  2EA4 A;  4IKT A;  4IKS A;  4S01 A;  3L7G A;  4FKC A;  1O0X A; 
#chains in the Genus database with same CATH homology
 3OOO A;  2OKN A;  3TB5 A;  4U71 A;  4FO7 A;  3BIP A;  2DFI A;  1C22 A;  4IU6 A;  1N51 A;  2BWW A;  3OVK A;  2P98 A;  3CB6 A;  2ZSG A;  2GG0 A;  3IU8 A;  5E5B A;  3O5V A;  4IPA A;  2EVM A;  2Q93 A;  4RZZ A;  2BB7 A;  2BH3 A;  4PNC A;  2GTX A;  1YW9 A;  3MAT A;  1C27 A;  4FLL A;  1PV9 A;  1XNZ A;  3MX6 A;  4U1B A;  5D6E A;  3PKE A;  1BN5 A;  4B28 A;  2BHC A;  1M35 A;  2BWU A;  3ROR A;  2Q96 A;  1XGO A;  4FLI A;  4U6C A;  2Q94 A;  1C23 A;  1YW8 A;  2P9A A;  4IF7 A;  4Z7M A;  2V3Y A;  2V6C A;  2BWX A;  1B59 A;  3PEB A;  5E2C A;  1YVM A;  4OOK A;  4ZWP A;  1B6A A;  4IDY A;  1C21 A;  1WBQ A;  2IW2 A;  2GU5 A;  2P99 A;  3PKC A;  3D27 A;  4A6W A;  4U76 A;  3PKB A;  3QOC A;  3L24 A;  5FCF A;  2GGB A;  4FUK A;  4A6V A;  4ZWO A;  1QZY A;  2EVO A;  5CNX A;  2GG3 A;  3PKD A;  4IEC A;  5JHU A;  2BWY A;  2B3K A;  1WY2 A;  5CIK A;  2OAZ A;  3MR1 A;  2BWS A;  2GG5 A;  1KQ0 A;  2GG7 A;  5D6F A;  2GG9 A;  4JUQ A;  2V3X A;  5CE6 A;  2Q92 A;  4KM3 A;  1MAT A;  3PKA A;  1R5H A;  2B3L A;  2GZ5 A;  5CDL A;  2GU6 A;  4PV4 A;  1WL9 A;  2GG8 A;  4IKU A;  1XGS A;  4EGE A;  2Q95 A;  4QR8 A;  4HXX A;  4IKR A;  1KP0 A;  1A16 A;  4ZNG A;  2HOW A;  1CHM A;  1Y1N A;  1XGM A;  1WL6 A;  2V3Z A;  1C24 A;  4U73 A;  2BWV A;  1QXZ A;  1W2M A;  5FCH A;  2NQ6 A;  3BIT A;  1XGN A;  4U69 A;  2G6P A;  4U6E A;  3I7M A;  4U70 A;  3FM3 A;  2GG2 A;  5CDV A;  4U6J A;  2BHB A;  3IL0 A;  2Q8K A;  4FO8 A;  4S2R P;  1YJ3 A;  4ZWU A;  1W7V A;  1QXY A;  3FMR A;  3IU9 A;  3TAV A;  4S00 A;  1YW7 A;  1BOA A;  2GGC A;  2ADU A;  2MAT A;  2GU7 A;  1WLR A;  4U6W A;  4U6Z A;  3FMQ A;  1R5G A;  1WN1 A;  4R60 A;  4RGZ 1;  5JI6 A;  2BWT A;  3S6B A;  2EA2 A;  5CDE A;  1KQ9 A;  3Q6D A;  1WKM A;  3CB5 A;  3CTZ A;  4MAT A;  3IU7 A;  5CLS A;  2BHA A;  2EVC A;  4RZY A;  4U75 A;  5JFR A;  2BHD A;  2GA2 A;  4FLK A;  3PN9 A;  2BN7 A;  2B3H A;  1R58 A;  1JAW A;  2NQ7 A;  4FLJ A;  1QXW A;  4S2T P;  3IG4 A;  2GU4 A;  3RVA A;  3BIQ A;  2EA4 A;  4IKT A;  4IKS A;  4S01 A;  3L7G A;  4FKC A;  1O0X A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...