1W7VA

Znmg substituted aminopeptidase p from e. coli
Total Genus 158
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
440
structure length
439
Chain Sequence
b'SEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENEEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARKQ'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural and Functional Implications of Metal Ion Selection in Aminopeptidase P, a Metalloprotease with a Dinuclear Metal Center.
pubmed doi rcsb
molecule keywords XAA-PRO AMINOPEPTIDASE
source organism Escherichia coli
molecule tags Hydrolase
total genus 158
structure length 439
sequence length 440
chains with identical sequence B, C, D
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2004-09-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF05195 AMP_N Aminopeptidase P, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 1w7vA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 1w7vA02
1WLRA 2V3YA 1C22A 2EA4A 2GU5A 2ZSGA 1KQ0A 3PKEA 2GG0A 4IU6A 3L7GA 3OVKA 4U76A 5E5BA 3FMRA 3CB5A 2GG2A 4MATA 3BIPA 2Q92A 4U6JA 2GG7A 2NQ7A 1C24A 4RZZA 3TB5A 1C27A 3FMQA 4B28A 4JUQA 4ZWUA 4A6WA 4U6ZA 2GG9A 1R58A 3OOOA 3IU7A 1WN1A 1YJ3A 2GU4A 5FCHA 2ADUA 4U6EA 1YW8A 2V3ZA 4IKRA 4S00A 2Q96A 2MATA 3MR1A 1PV9A 4U75A 3IU8A 1YW9A 2GGBA 3IG4A 4FKCA 2B3KA 4RGZ1 3RVAA 1XGOA 1WBQA 2BB7A 4FLIA 5CDEA 1CHMA 3BIQA 5E2CA 1XGNA 1C21A 5JI6A 3I7MA 1KP0A 1XNZA 4IKSA 4S01A 3O5VA 3D27A 4U69A 3PKDA 3IL0A 5JHUA 3PEBA 4QR8A 3PKBA 4IKUA 2V3XA 4U1BA 4IDYA 3RORA 1A16A 2HOWA 2P9AA 2IW2A 5CIKA 1KQ9A 5CLSA 4U73A 5D6FA 1QXYA 2GG3A 1BN5A 1QZYA 3PN9A 2GA2A 1W7VA 4PV4A 2GTXA 4FLKA 2BH3A 5JFRA 2GU6A 2GU7A 3PKAA 4FLJA 2B3HA 1O0XA 1B59A 4U70A 4A6VA 1WY2A 2BWWA 2GZ5A 4KM3A 1W2MA 1JAWA 2BHDA 2BHCA 5FCFA 2BWXA 4EGEA 1QXZA 2NQ6A 2G6PA 3PKCA 1WKMA 2EVCA 2BN7A 5CNXA 1YVMA 2BWTA 1R5GA 3IU9A 3TAVA 4R60A 4IF7A 4FO8A 2DFIA 1XGSA 4FO7A 2Q8KA 3CB6A 2BWYA 4ZWPA 4U71A 3L24A 3Q6DA 4HXXA 3S6BA 1YW7A 2Q93A 4RZYA 2P99A 1R5HA 2BWUA 4S2TP 2EVMA 3QOCA 2EVOA 5D6EA 4OOKA 1C23A 5CDVA 2OKNA 4PNCA 3FM3A 1N51A 1BOAA 2B3LA 4S2RP 5CDLA 4U6WA 2P98A 4FLLA 4FUKA 4ZNGA 1WL6A 4Z7MA 4ZWOA 2V6CA 1QXWA 2BWVA 1Y1NA 1XGMA 2EA2A 2BHBA 2BWSA 2OAZA 1WL9A 2Q94A 3MATA 4IKTA 2GG5A 2Q95A 1MATA 3MX6A 5CE6A 2BHAA 3CTZA 3BITA 4U6CA 1M35A 4IECA 2GG8A 4IPAA 2GGCA 1B6AA
chains in the Genus database with same CATH superfamily
1WLRA 2V3YA 1C22A 2EA4A 2GU5A 2ZSGA 1KQ0A 3PKEA 2GG0A 4IU6A 3L7GA 3OVKA 4U76A 5E5BA 3FMRA 3CB5A 2GG2A 4MATA 3BIPA 2Q92A 4U6JA 2GG7A 2NQ7A 1C24A 4RZZA 3TB5A 1C27A 3FMQA 4B28A 4JUQA 4ZWUA 4A6WA 4U6ZA 2GG9A 1R58A 3OOOA 3IU7A 1WN1A 1YJ3A 2GU4A 5FCHA 2ADUA 4U6EA 1YW8A 2V3ZA 4IKRA 4S00A 2Q96A 2MATA 3MR1A 1PV9A 4U75A 3IU8A 1YW9A 2GGBA 3IG4A 4FKCA 2B3KA 4RGZ1 3RVAA 1XGOA 1WBQA 2BB7A 4FLIA 5CDEA 1CHMA 3BIQA 5E2CA 1XGNA 1C21A 5JI6A 3I7MA 1KP0A 1XNZA 4IKSA 4S01A 3O5VA 3D27A 4U69A 3PKDA 3IL0A 5JHUA 3PEBA 4QR8A 3PKBA 4IKUA 2V3XA 4U1BA 4IDYA 3RORA 1A16A 2HOWA 2P9AA 2IW2A 5CIKA 1KQ9A 5CLSA 4U73A 5D6FA 1QXYA 2GG3A 1BN5A 1QZYA 3PN9A 2GA2A 1W7VA 4PV4A 2GTXA 4FLKA 2BH3A 5JFRA 2GU6A 2GU7A 3PKAA 4FLJA 2B3HA 1O0XA 1B59A 4U70A 4A6VA 1WY2A 2BWWA 2GZ5A 4KM3A 1W2MA 1JAWA 2BHDA 2BHCA 5FCFA 2BWXA 4EGEA 1QXZA 2NQ6A 2G6PA 3PKCA 1WKMA 2EVCA 2BN7A 5CNXA 1YVMA 2BWTA 1R5GA 3IU9A 3TAVA 4R60A 4IF7A 4FO8A 2DFIA 1XGSA 4FO7A 2Q8KA 3CB6A 2BWYA 4ZWPA 4U71A 3L24A 3Q6DA 4HXXA 3S6BA 1YW7A 2Q93A 4RZYA 2P99A 1R5HA 2BWUA 4S2TP 2EVMA 3QOCA 2EVOA 5D6EA 4OOKA 1C23A 5CDVA 2OKNA 4PNCA 3FM3A 1N51A 1BOAA 2B3LA 4S2RP 5CDLA 4U6WA 2P98A 4FLLA 4FUKA 4ZNGA 1WL6A 4Z7MA 4ZWOA 2V6CA 1QXWA 2BWVA 1Y1NA 1XGMA 2EA2A 2BHBA 2BWSA 2OAZA 1WL9A 2Q94A 3MATA 4IKTA 2GG5A 2Q95A 1MATA 3MX6A 5CE6A 2BHAA 3CTZA 3BITA 4U6CA 1M35A 4IECA 2GG8A 4IPAA 2GGCA 1B6AA
chains in the Genus database with same CATH topology
1WLRA 2V3YA 1C22A 2EA4A 2GU5A 2ZSGA 1KQ0A 3PKEA 2GG0A 4IU6A 3L7GA 3OVKA 4U76A 5E5BA 3FMRA 3CB5A 2GG2A 4MATA 3BIPA 2Q92A 4U6JA 2GG7A 2NQ7A 1C24A 4RZZA 3TB5A 1C27A 3FMQA 4B28A 4JUQA 4ZWUA 4A6WA 4U6ZA 2GG9A 1R58A 3OOOA 3IU7A 1WN1A 1YJ3A 2GU4A 5FCHA 2ADUA 4U6EA 1YW8A 2V3ZA 4IKRA 4S00A 2Q96A 2MATA 3MR1A 1PV9A 4U75A 3IU8A 1YW9A 2GGBA 3IG4A 4FKCA 2B3KA 4RGZ1 3RVAA 1XGOA 1WBQA 2BB7A 4FLIA 5CDEA 1CHMA 3BIQA 5E2CA 1XGNA 1C21A 5JI6A 3I7MA 1KP0A 1XNZA 4IKSA 4S01A 3O5VA 3D27A 4U69A 3PKDA 3IL0A 5JHUA 3PEBA 4QR8A 3PKBA 4IKUA 2V3XA 4U1BA 4IDYA 3RORA 1A16A 2HOWA 2P9AA 2IW2A 5CIKA 1KQ9A 5CLSA 4U73A 5D6FA 1QXYA 2GG3A 1BN5A 1QZYA 3PN9A 2GA2A 1W7VA 4PV4A 2GTXA 4FLKA 2BH3A 5JFRA 2GU6A 2GU7A 3PKAA 4FLJA 2B3HA 1O0XA 1B59A 4U70A 4A6VA 1WY2A 2BWWA 2GZ5A 4KM3A 1W2MA 1JAWA 2BHDA 2BHCA 5FCFA 2BWXA 4EGEA 1QXZA 2NQ6A 2G6PA 3PKCA 1WKMA 2EVCA 2BN7A 5CNXA 1YVMA 2BWTA 1R5GA 3IU9A 3TAVA 4R60A 4IF7A 4FO8A 2DFIA 1XGSA 4FO7A 2Q8KA 3CB6A 2BWYA 4ZWPA 4U71A 3L24A 3Q6DA 4HXXA 3S6BA 1YW7A 2Q93A 4RZYA 2P99A 1R5HA 2BWUA 4S2TP 2EVMA 3QOCA 2EVOA 5D6EA 4OOKA 1C23A 5CDVA 2OKNA 4PNCA 3FM3A 1N51A 1BOAA 2B3LA 4S2RP 5CDLA 4U6WA 2P98A 4FLLA 4FUKA 4ZNGA 1WL6A 4Z7MA 4ZWOA 2V6CA 1QXWA 2BWVA 1Y1NA 1XGMA 2EA2A 2BHBA 2BWSA 2OAZA 1WL9A 2Q94A 3MATA 4IKTA 2GG5A 2Q95A 1MATA 3MX6A 5CE6A 2BHAA 3CTZA 3BITA 4U6CA 1M35A 4IECA 2GG8A 4IPAA 2GGCA 1B6AA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WLR A;  2V3Y A;  1C22 A;  2EA4 A;  2GU5 A;  2ZSG A;  1KQ0 A;  3PKE A;  2GG0 A;  4IU6 A;  3L7G A;  3OVK A;  4U76 A;  5E5B A;  3FMR A;  3CB5 A;  2GG2 A;  4MAT A;  3BIP A;  2Q92 A;  4U6J A;  2GG7 A;  2NQ7 A;  1C24 A;  4RZZ A;  3TB5 A;  1C27 A;  3FMQ A;  4B28 A;  4JUQ A;  4ZWU A;  4A6W A;  4U6Z A;  2GG9 A;  1R58 A;  3OOO A;  3IU7 A;  1WN1 A;  1YJ3 A;  2GU4 A;  5FCH A;  2ADU A;  4U6E A;  1YW8 A;  2V3Z A;  4IKR A;  4S00 A;  2Q96 A;  2MAT A;  3MR1 A;  1PV9 A;  4U75 A;  3IU8 A;  1YW9 A;  2GGB A;  3IG4 A;  4FKC A;  2B3K A;  4RGZ 1;  3RVA A;  1XGO A;  1WBQ A;  2BB7 A;  4FLI A;  5CDE A;  1CHM A;  3BIQ A;  5E2C A;  1XGN A;  1C21 A;  5JI6 A;  3I7M A;  1KP0 A;  1XNZ A;  4IKS A;  4S01 A;  3O5V A;  3D27 A;  4U69 A;  3PKD A;  3IL0 A;  5JHU A;  3PEB A;  4QR8 A;  3PKB A;  4IKU A;  2V3X A;  4U1B A;  4IDY A;  3ROR A;  1A16 A;  2HOW A;  2P9A A;  2IW2 A;  5CIK A;  1KQ9 A;  5CLS A;  4U73 A;  5D6F A;  1QXY A;  2GG3 A;  1BN5 A;  1QZY A;  3PN9 A;  2GA2 A;  1W7V A;  4PV4 A;  2GTX A;  4FLK A;  2BH3 A;  5JFR A;  2GU6 A;  2GU7 A;  3PKA A;  4FLJ A;  2B3H A;  1O0X A;  1B59 A;  4U70 A;  4A6V A;  1WY2 A;  2BWW A;  2GZ5 A;  4KM3 A;  1W2M A;  1JAW A;  2BHD A;  2BHC A;  5FCF A;  2BWX A;  4EGE A;  1QXZ A;  2NQ6 A;  2G6P A;  3PKC A;  1WKM A;  2EVC A;  2BN7 A;  5CNX A;  1YVM A;  2BWT A;  1R5G A;  3IU9 A;  3TAV A;  4R60 A;  4IF7 A;  4FO8 A;  2DFI A;  1XGS A;  4FO7 A;  2Q8K A;  3CB6 A;  2BWY A;  4ZWP A;  4U71 A;  3L24 A;  3Q6D A;  4HXX A;  3S6B A;  1YW7 A;  2Q93 A;  4RZY A;  2P99 A;  1R5H A;  2BWU A;  4S2T P;  2EVM A;  3QOC A;  2EVO A;  5D6E A;  4OOK A;  1C23 A;  5CDV A;  2OKN A;  4PNC A;  3FM3 A;  1N51 A;  1BOA A;  2B3L A;  4S2R P;  5CDL A;  4U6W A;  2P98 A;  4FLL A;  4FUK A;  4ZNG A;  1WL6 A;  4Z7M A;  4ZWO A;  2V6C A;  1QXW A;  2BWV A;  1Y1N A;  1XGM A;  2EA2 A;  2BHB A;  2BWS A;  2OAZ A;  1WL9 A;  2Q94 A;  3MAT A;  4IKT A;  2GG5 A;  2Q95 A;  1MAT A;  3MX6 A;  5CE6 A;  2BHA A;  3CTZ A;  3BIT A;  4U6C A;  1M35 A;  4IEC A;  2GG8 A;  4IPA A;  2GGC A;  1B6A A; 
#chains in the Genus database with same CATH topology
 1WLR A;  2V3Y A;  1C22 A;  2EA4 A;  2GU5 A;  2ZSG A;  1KQ0 A;  3PKE A;  2GG0 A;  4IU6 A;  3L7G A;  3OVK A;  4U76 A;  5E5B A;  3FMR A;  3CB5 A;  2GG2 A;  4MAT A;  3BIP A;  2Q92 A;  4U6J A;  2GG7 A;  2NQ7 A;  1C24 A;  4RZZ A;  3TB5 A;  1C27 A;  3FMQ A;  4B28 A;  4JUQ A;  4ZWU A;  4A6W A;  4U6Z A;  2GG9 A;  1R58 A;  3OOO A;  3IU7 A;  1WN1 A;  1YJ3 A;  2GU4 A;  5FCH A;  2ADU A;  4U6E A;  1YW8 A;  2V3Z A;  4IKR A;  4S00 A;  2Q96 A;  2MAT A;  3MR1 A;  1PV9 A;  4U75 A;  3IU8 A;  1YW9 A;  2GGB A;  3IG4 A;  4FKC A;  2B3K A;  4RGZ 1;  3RVA A;  1XGO A;  1WBQ A;  2BB7 A;  4FLI A;  5CDE A;  1CHM A;  3BIQ A;  5E2C A;  1XGN A;  1C21 A;  5JI6 A;  3I7M A;  1KP0 A;  1XNZ A;  4IKS A;  4S01 A;  3O5V A;  3D27 A;  4U69 A;  3PKD A;  3IL0 A;  5JHU A;  3PEB A;  4QR8 A;  3PKB A;  4IKU A;  2V3X A;  4U1B A;  4IDY A;  3ROR A;  1A16 A;  2HOW A;  2P9A A;  2IW2 A;  5CIK A;  1KQ9 A;  5CLS A;  4U73 A;  5D6F A;  1QXY A;  2GG3 A;  1BN5 A;  1QZY A;  3PN9 A;  2GA2 A;  1W7V A;  4PV4 A;  2GTX A;  4FLK A;  2BH3 A;  5JFR A;  2GU6 A;  2GU7 A;  3PKA A;  4FLJ A;  2B3H A;  1O0X A;  1B59 A;  4U70 A;  4A6V A;  1WY2 A;  2BWW A;  2GZ5 A;  4KM3 A;  1W2M A;  1JAW A;  2BHD A;  2BHC A;  5FCF A;  2BWX A;  4EGE A;  1QXZ A;  2NQ6 A;  2G6P A;  3PKC A;  1WKM A;  2EVC A;  2BN7 A;  5CNX A;  1YVM A;  2BWT A;  1R5G A;  3IU9 A;  3TAV A;  4R60 A;  4IF7 A;  4FO8 A;  2DFI A;  1XGS A;  4FO7 A;  2Q8K A;  3CB6 A;  2BWY A;  4ZWP A;  4U71 A;  3L24 A;  3Q6D A;  4HXX A;  3S6B A;  1YW7 A;  2Q93 A;  4RZY A;  2P99 A;  1R5H A;  2BWU A;  4S2T P;  2EVM A;  3QOC A;  2EVO A;  5D6E A;  4OOK A;  1C23 A;  5CDV A;  2OKN A;  4PNC A;  3FM3 A;  1N51 A;  1BOA A;  2B3L A;  4S2R P;  5CDL A;  4U6W A;  2P98 A;  4FLL A;  4FUK A;  4ZNG A;  1WL6 A;  4Z7M A;  4ZWO A;  2V6C A;  1QXW A;  2BWV A;  1Y1N A;  1XGM A;  2EA2 A;  2BHB A;  2BWS A;  2OAZ A;  1WL9 A;  2Q94 A;  3MAT A;  4IKT A;  2GG5 A;  2Q95 A;  1MAT A;  3MX6 A;  5CE6 A;  2BHA A;  3CTZ A;  3BIT A;  4U6C A;  1M35 A;  4IEC A;  2GG8 A;  4IPA A;  2GGC A;  1B6A A; 
#chains in the Genus database with same CATH homology
 1WLR A;  2V3Y A;  1C22 A;  2EA4 A;  2GU5 A;  2ZSG A;  1KQ0 A;  3PKE A;  2GG0 A;  4IU6 A;  3L7G A;  3OVK A;  4U76 A;  5E5B A;  3FMR A;  3CB5 A;  2GG2 A;  4MAT A;  3BIP A;  2Q92 A;  4U6J A;  2GG7 A;  2NQ7 A;  1C24 A;  4RZZ A;  3TB5 A;  1C27 A;  3FMQ A;  4B28 A;  4JUQ A;  4ZWU A;  4A6W A;  4U6Z A;  2GG9 A;  1R58 A;  3OOO A;  3IU7 A;  1WN1 A;  1YJ3 A;  2GU4 A;  5FCH A;  2ADU A;  4U6E A;  1YW8 A;  2V3Z A;  4IKR A;  4S00 A;  2Q96 A;  2MAT A;  3MR1 A;  1PV9 A;  4U75 A;  3IU8 A;  1YW9 A;  2GGB A;  3IG4 A;  4FKC A;  2B3K A;  4RGZ 1;  3RVA A;  1XGO A;  1WBQ A;  2BB7 A;  4FLI A;  5CDE A;  1CHM A;  3BIQ A;  5E2C A;  1XGN A;  1C21 A;  5JI6 A;  3I7M A;  1KP0 A;  1XNZ A;  4IKS A;  4S01 A;  3O5V A;  3D27 A;  4U69 A;  3PKD A;  3IL0 A;  5JHU A;  3PEB A;  4QR8 A;  3PKB A;  4IKU A;  2V3X A;  4U1B A;  4IDY A;  3ROR A;  1A16 A;  2HOW A;  2P9A A;  2IW2 A;  5CIK A;  1KQ9 A;  5CLS A;  4U73 A;  5D6F A;  1QXY A;  2GG3 A;  1BN5 A;  1QZY A;  3PN9 A;  2GA2 A;  1W7V A;  4PV4 A;  2GTX A;  4FLK A;  2BH3 A;  5JFR A;  2GU6 A;  2GU7 A;  3PKA A;  4FLJ A;  2B3H A;  1O0X A;  1B59 A;  4U70 A;  4A6V A;  1WY2 A;  2BWW A;  2GZ5 A;  4KM3 A;  1W2M A;  1JAW A;  2BHD A;  2BHC A;  5FCF A;  2BWX A;  4EGE A;  1QXZ A;  2NQ6 A;  2G6P A;  3PKC A;  1WKM A;  2EVC A;  2BN7 A;  5CNX A;  1YVM A;  2BWT A;  1R5G A;  3IU9 A;  3TAV A;  4R60 A;  4IF7 A;  4FO8 A;  2DFI A;  1XGS A;  4FO7 A;  2Q8K A;  3CB6 A;  2BWY A;  4ZWP A;  4U71 A;  3L24 A;  3Q6D A;  4HXX A;  3S6B A;  1YW7 A;  2Q93 A;  4RZY A;  2P99 A;  1R5H A;  2BWU A;  4S2T P;  2EVM A;  3QOC A;  2EVO A;  5D6E A;  4OOK A;  1C23 A;  5CDV A;  2OKN A;  4PNC A;  3FM3 A;  1N51 A;  1BOA A;  2B3L A;  4S2R P;  5CDL A;  4U6W A;  2P98 A;  4FLL A;  4FUK A;  4ZNG A;  1WL6 A;  4Z7M A;  4ZWO A;  2V6C A;  1QXW A;  2BWV A;  1Y1N A;  1XGM A;  2EA2 A;  2BHB A;  2BWS A;  2OAZ A;  1WL9 A;  2Q94 A;  3MAT A;  4IKT A;  2GG5 A;  2Q95 A;  1MAT A;  3MX6 A;  5CE6 A;  2BHA A;  3CTZ A;  3BIT A;  4U6C A;  1M35 A;  4IEC A;  2GG8 A;  4IPA A;  2GGC A;  1B6A A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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