3RVAA

Crystal structure of organophosphorus acid anhydrolase from alteromonas macleodii
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
445
structure length
444
Chain Sequence
SQHKATYQQHIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHKVPPEPNDFWTDSFDIKLLQQADAVEKFLPYDKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAASRQGDNDVPYTSIVALNEHASILHYMQDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKNENMTRDLDLNLEH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Organophosphorus acid anhydrolase
publication title Organophosphorus acid anhydrolase from Alteromonas macleodii: structural study and functional relationship to prolidases.
pubmed doi rcsb
source organism Alteromonas macleodii
molecule tags Hydrolase
total genus 159
structure length 444
sequence length 445
ec nomenclature ec 3.1.8.2: Diisopropyl-fluorophosphatase.
pdb deposition date 2011-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3rvaA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3rvaA02
1WKMA 4ZWUA 2Q8KA 4IKRA 1QXZA 4QR8A 2GG0A 3MATA 1WLRA 2V6CA 4IU6A 5CIKA 2P99A 3PKAA 3CTZA 2OAZA 1N51A 5FCHA 2BB7A 5JFRA 4RZZA 2B3LA 4HXXA 2BN7A 2NQ6A 4Z7MA 1WBQA 4B28A 4FO8A 4U6EA 1R58A 4U6JA 5CDEA 2BHBA 4ZWOA 5CDLA 4PNCA 4RGZ1 1C27A 2GGBA 5JHUA 2P9AA 5E2CA 2V3YA 3OOOA 1CHMA 3OVKA 4A6WA 1B6AA 1B59A 3BIPA 4U6CA 1WL9A 2GA2A 3FMRA 4U75A 1MATA 4U1BA 2BHDA 1W2MA 1BOAA 2GZ5A 4RZYA 1C24A 4U71A 1XGNA 1XGMA 2Q92A 2BWUA 2EA2A 1PV9A 5E5BA 5CDVA 3FMQA 1XGOA 3RVAA 2MATA 4IF7A 1WY2A 5CE6A 1WN1A 3IU7A 4FLJA 1JAWA 3IG4A 3PKEA 3MR1A 4FLKA 4IECA 2GU4A 3O5VA 4IKSA 2B3HA 4U6WA 4U76A 2GG8A 3Q6DA 2ADUA 3TAVA 2NQ7A 1KP0A 2P98A 4U6ZA 2BHAA 3I7MA 2EA4A 2BWTA 1XNZA 1Y1NA 2GG7A 2B3KA 2BWSA 1XGSA 2BWVA 4IKTA 1KQ0A 2EVCA 2G6PA 3IU8A 2EVOA 2V3ZA 2V3XA 2BWWA 2GGCA 3MX6A 4IKUA 4S2TP 2HOWA 4KM3A 1YW9A 1W7VA 1YJ3A 1YW7A 3PEBA 2BWXA 2GG9A 5CLSA 2Q94A 4JUQA 4U70A 2GG5A 4FUKA 1QXYA 3FM3A 3IL0A 2Q93A 2GG2A 3L7GA 1YW8A 1M35A 1R5GA 2GU6A 3PKCA 1YVMA 2BH3A 3IU9A 1QXWA 3TB5A 4FO7A 4ZNGA 4FLLA 1C22A 4R60A 1C21A 1O0XA 2EVMA 2GG3A 1C23A 4A6VA 1R5HA 4U73A 2GU7A 1A16A 2DFIA 2ZSGA 1WL6A 2Q95A 1BN5A 3PN9A 2GU5A 4OOKA 4EGEA 3BITA 4S01A 3BIQA 3D27A 3PKBA 3QOCA 5FCFA 4S00A 3CB5A 4S2RP 5D6EA 4ZWPA 3RORA 4PV4A 2GTXA 2OKNA 1QZYA 3PKDA 5JI6A 2BWYA 4IPAA 3L24A 4U69A 4FKCA 3S6BA 4IDYA 1KQ9A 2Q96A 5D6FA 2BHCA 3CB6A 5CNXA 4FLIA 4MATA 2IW2A
chains in the Genus database with same CATH superfamily
1WKMA 4ZWUA 2Q8KA 4IKRA 1QXZA 4QR8A 2GG0A 3MATA 1WLRA 2V6CA 4IU6A 5CIKA 2P99A 3PKAA 3CTZA 2OAZA 1N51A 5FCHA 2BB7A 5JFRA 4RZZA 2B3LA 4HXXA 2BN7A 2NQ6A 4Z7MA 1WBQA 4B28A 4FO8A 4U6EA 1R58A 4U6JA 5CDEA 2BHBA 4ZWOA 5CDLA 4PNCA 4RGZ1 1C27A 2GGBA 5JHUA 2P9AA 5E2CA 2V3YA 3OOOA 1CHMA 3OVKA 4A6WA 1B6AA 1B59A 3BIPA 4U6CA 1WL9A 2GA2A 3FMRA 4U75A 1MATA 4U1BA 2BHDA 1W2MA 1BOAA 2GZ5A 4RZYA 1C24A 4U71A 1XGNA 1XGMA 2Q92A 2BWUA 2EA2A 1PV9A 5E5BA 5CDVA 3FMQA 1XGOA 3RVAA 2MATA 4IF7A 1WY2A 5CE6A 1WN1A 3IU7A 4FLJA 1JAWA 3IG4A 3PKEA 3MR1A 4FLKA 4IECA 2GU4A 3O5VA 4IKSA 2B3HA 4U6WA 4U76A 2GG8A 3Q6DA 2ADUA 3TAVA 2NQ7A 1KP0A 2P98A 4U6ZA 2BHAA 3I7MA 2EA4A 2BWTA 1XNZA 1Y1NA 2GG7A 2B3KA 2BWSA 1XGSA 2BWVA 4IKTA 1KQ0A 2EVCA 2G6PA 3IU8A 2EVOA 2V3ZA 2V3XA 2BWWA 2GGCA 3MX6A 4IKUA 4S2TP 2HOWA 4KM3A 1YW9A 1W7VA 1YJ3A 1YW7A 3PEBA 2BWXA 2GG9A 5CLSA 2Q94A 4JUQA 4U70A 2GG5A 4FUKA 1QXYA 3FM3A 3IL0A 2Q93A 2GG2A 3L7GA 1YW8A 1M35A 1R5GA 2GU6A 3PKCA 1YVMA 2BH3A 3IU9A 1QXWA 3TB5A 4FO7A 4ZNGA 4FLLA 1C22A 4R60A 1C21A 1O0XA 2EVMA 2GG3A 1C23A 4A6VA 1R5HA 4U73A 2GU7A 1A16A 2DFIA 2ZSGA 1WL6A 2Q95A 1BN5A 3PN9A 2GU5A 4OOKA 4EGEA 3BITA 4S01A 3BIQA 3D27A 3PKBA 3QOCA 5FCFA 4S00A 3CB5A 4S2RP 5D6EA 4ZWPA 3RORA 4PV4A 2GTXA 2OKNA 1QZYA 3PKDA 5JI6A 2BWYA 4IPAA 3L24A 4U69A 4FKCA 3S6BA 4IDYA 1KQ9A 2Q96A 5D6FA 2BHCA 3CB6A 5CNXA 4FLIA 4MATA 2IW2A
chains in the Genus database with same CATH topology
1WKMA 4ZWUA 2Q8KA 4IKRA 1QXZA 4QR8A 2GG0A 3MATA 1WLRA 2V6CA 4IU6A 5CIKA 2P99A 3PKAA 3CTZA 2OAZA 1N51A 5FCHA 2BB7A 5JFRA 4RZZA 2B3LA 4HXXA 2BN7A 2NQ6A 4Z7MA 1WBQA 4B28A 4FO8A 4U6EA 1R58A 4U6JA 5CDEA 2BHBA 4ZWOA 5CDLA 4PNCA 4RGZ1 1C27A 2GGBA 5JHUA 2P9AA 5E2CA 2V3YA 3OOOA 1CHMA 3OVKA 4A6WA 1B6AA 1B59A 3BIPA 4U6CA 1WL9A 2GA2A 3FMRA 4U75A 1MATA 4U1BA 2BHDA 1W2MA 1BOAA 2GZ5A 4RZYA 1C24A 4U71A 1XGNA 1XGMA 2Q92A 2BWUA 2EA2A 1PV9A 5E5BA 5CDVA 3FMQA 1XGOA 3RVAA 2MATA 4IF7A 1WY2A 5CE6A 1WN1A 3IU7A 4FLJA 1JAWA 3IG4A 3PKEA 3MR1A 4FLKA 4IECA 2GU4A 3O5VA 4IKSA 2B3HA 4U6WA 4U76A 2GG8A 3Q6DA 2ADUA 3TAVA 2NQ7A 1KP0A 2P98A 4U6ZA 2BHAA 3I7MA 2EA4A 2BWTA 1XNZA 1Y1NA 2GG7A 2B3KA 2BWSA 1XGSA 2BWVA 4IKTA 1KQ0A 2EVCA 2G6PA 3IU8A 2EVOA 2V3ZA 2V3XA 2BWWA 2GGCA 3MX6A 4IKUA 4S2TP 2HOWA 4KM3A 1YW9A 1W7VA 1YJ3A 1YW7A 3PEBA 2BWXA 2GG9A 5CLSA 2Q94A 4JUQA 4U70A 2GG5A 4FUKA 1QXYA 3FM3A 3IL0A 2Q93A 2GG2A 3L7GA 1YW8A 1M35A 1R5GA 2GU6A 3PKCA 1YVMA 2BH3A 3IU9A 1QXWA 3TB5A 4FO7A 4ZNGA 4FLLA 1C22A 4R60A 1C21A 1O0XA 2EVMA 2GG3A 1C23A 4A6VA 1R5HA 4U73A 2GU7A 1A16A 2DFIA 2ZSGA 1WL6A 2Q95A 1BN5A 3PN9A 2GU5A 4OOKA 4EGEA 3BITA 4S01A 3BIQA 3D27A 3PKBA 3QOCA 5FCFA 4S00A 3CB5A 4S2RP 5D6EA 4ZWPA 3RORA 4PV4A 2GTXA 2OKNA 1QZYA 3PKDA 5JI6A 2BWYA 4IPAA 3L24A 4U69A 4FKCA 3S6BA 4IDYA 1KQ9A 2Q96A 5D6FA 2BHCA 3CB6A 5CNXA 4FLIA 4MATA 2IW2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1WKM A;  4ZWU A;  2Q8K A;  4IKR A;  1QXZ A;  4QR8 A;  2GG0 A;  3MAT A;  1WLR A;  2V6C A;  4IU6 A;  5CIK A;  2P99 A;  3PKA A;  3CTZ A;  2OAZ A;  1N51 A;  5FCH A;  2BB7 A;  5JFR A;  4RZZ A;  2B3L A;  4HXX A;  2BN7 A;  2NQ6 A;  4Z7M A;  1WBQ A;  4B28 A;  4FO8 A;  4U6E A;  1R58 A;  4U6J A;  5CDE A;  2BHB A;  4ZWO A;  5CDL A;  4PNC A;  4RGZ 1;  1C27 A;  2GGB A;  5JHU A;  2P9A A;  5E2C A;  2V3Y A;  3OOO A;  1CHM A;  3OVK A;  4A6W A;  1B6A A;  1B59 A;  3BIP A;  4U6C A;  1WL9 A;  2GA2 A;  3FMR A;  4U75 A;  1MAT A;  4U1B A;  2BHD A;  1W2M A;  1BOA A;  2GZ5 A;  4RZY A;  1C24 A;  4U71 A;  1XGN A;  1XGM A;  2Q92 A;  2BWU A;  2EA2 A;  1PV9 A;  5E5B A;  5CDV A;  3FMQ A;  1XGO A;  3RVA A;  2MAT A;  4IF7 A;  1WY2 A;  5CE6 A;  1WN1 A;  3IU7 A;  4FLJ A;  1JAW A;  3IG4 A;  3PKE A;  3MR1 A;  4FLK A;  4IEC A;  2GU4 A;  3O5V A;  4IKS A;  2B3H A;  4U6W A;  4U76 A;  2GG8 A;  3Q6D A;  2ADU A;  3TAV A;  2NQ7 A;  1KP0 A;  2P98 A;  4U6Z A;  2BHA A;  3I7M A;  2EA4 A;  2BWT A;  1XNZ A;  1Y1N A;  2GG7 A;  2B3K A;  2BWS A;  1XGS A;  2BWV A;  4IKT A;  1KQ0 A;  2EVC A;  2G6P A;  3IU8 A;  2EVO A;  2V3Z A;  2V3X A;  2BWW A;  2GGC A;  3MX6 A;  4IKU A;  4S2T P;  2HOW A;  4KM3 A;  1YW9 A;  1W7V A;  1YJ3 A;  1YW7 A;  3PEB A;  2BWX A;  2GG9 A;  5CLS A;  2Q94 A;  4JUQ A;  4U70 A;  2GG5 A;  4FUK A;  1QXY A;  3FM3 A;  3IL0 A;  2Q93 A;  2GG2 A;  3L7G A;  1YW8 A;  1M35 A;  1R5G A;  2GU6 A;  3PKC A;  1YVM A;  2BH3 A;  3IU9 A;  1QXW A;  3TB5 A;  4FO7 A;  4ZNG A;  4FLL A;  1C22 A;  4R60 A;  1C21 A;  1O0X A;  2EVM A;  2GG3 A;  1C23 A;  4A6V A;  1R5H A;  4U73 A;  2GU7 A;  1A16 A;  2DFI A;  2ZSG A;  1WL6 A;  2Q95 A;  1BN5 A;  3PN9 A;  2GU5 A;  4OOK A;  4EGE A;  3BIT A;  4S01 A;  3BIQ A;  3D27 A;  3PKB A;  3QOC A;  5FCF A;  4S00 A;  3CB5 A;  4S2R P;  5D6E A;  4ZWP A;  3ROR A;  4PV4 A;  2GTX A;  2OKN A;  1QZY A;  3PKD A;  5JI6 A;  2BWY A;  4IPA A;  3L24 A;  4U69 A;  4FKC A;  3S6B A;  4IDY A;  1KQ9 A;  2Q96 A;  5D6F A;  2BHC A;  3CB6 A;  5CNX A;  4FLI A;  4MAT A;  2IW2 A; 
#chains in the Genus database with same CATH topology
 1WKM A;  4ZWU A;  2Q8K A;  4IKR A;  1QXZ A;  4QR8 A;  2GG0 A;  3MAT A;  1WLR A;  2V6C A;  4IU6 A;  5CIK A;  2P99 A;  3PKA A;  3CTZ A;  2OAZ A;  1N51 A;  5FCH A;  2BB7 A;  5JFR A;  4RZZ A;  2B3L A;  4HXX A;  2BN7 A;  2NQ6 A;  4Z7M A;  1WBQ A;  4B28 A;  4FO8 A;  4U6E A;  1R58 A;  4U6J A;  5CDE A;  2BHB A;  4ZWO A;  5CDL A;  4PNC A;  4RGZ 1;  1C27 A;  2GGB A;  5JHU A;  2P9A A;  5E2C A;  2V3Y A;  3OOO A;  1CHM A;  3OVK A;  4A6W A;  1B6A A;  1B59 A;  3BIP A;  4U6C A;  1WL9 A;  2GA2 A;  3FMR A;  4U75 A;  1MAT A;  4U1B A;  2BHD A;  1W2M A;  1BOA A;  2GZ5 A;  4RZY A;  1C24 A;  4U71 A;  1XGN A;  1XGM A;  2Q92 A;  2BWU A;  2EA2 A;  1PV9 A;  5E5B A;  5CDV A;  3FMQ A;  1XGO A;  3RVA A;  2MAT A;  4IF7 A;  1WY2 A;  5CE6 A;  1WN1 A;  3IU7 A;  4FLJ A;  1JAW A;  3IG4 A;  3PKE A;  3MR1 A;  4FLK A;  4IEC A;  2GU4 A;  3O5V A;  4IKS A;  2B3H A;  4U6W A;  4U76 A;  2GG8 A;  3Q6D A;  2ADU A;  3TAV A;  2NQ7 A;  1KP0 A;  2P98 A;  4U6Z A;  2BHA A;  3I7M A;  2EA4 A;  2BWT A;  1XNZ A;  1Y1N A;  2GG7 A;  2B3K A;  2BWS A;  1XGS A;  2BWV A;  4IKT A;  1KQ0 A;  2EVC A;  2G6P A;  3IU8 A;  2EVO A;  2V3Z A;  2V3X A;  2BWW A;  2GGC A;  3MX6 A;  4IKU A;  4S2T P;  2HOW A;  4KM3 A;  1YW9 A;  1W7V A;  1YJ3 A;  1YW7 A;  3PEB A;  2BWX A;  2GG9 A;  5CLS A;  2Q94 A;  4JUQ A;  4U70 A;  2GG5 A;  4FUK A;  1QXY A;  3FM3 A;  3IL0 A;  2Q93 A;  2GG2 A;  3L7G A;  1YW8 A;  1M35 A;  1R5G A;  2GU6 A;  3PKC A;  1YVM A;  2BH3 A;  3IU9 A;  1QXW A;  3TB5 A;  4FO7 A;  4ZNG A;  4FLL A;  1C22 A;  4R60 A;  1C21 A;  1O0X A;  2EVM A;  2GG3 A;  1C23 A;  4A6V A;  1R5H A;  4U73 A;  2GU7 A;  1A16 A;  2DFI A;  2ZSG A;  1WL6 A;  2Q95 A;  1BN5 A;  3PN9 A;  2GU5 A;  4OOK A;  4EGE A;  3BIT A;  4S01 A;  3BIQ A;  3D27 A;  3PKB A;  3QOC A;  5FCF A;  4S00 A;  3CB5 A;  4S2R P;  5D6E A;  4ZWP A;  3ROR A;  4PV4 A;  2GTX A;  2OKN A;  1QZY A;  3PKD A;  5JI6 A;  2BWY A;  4IPA A;  3L24 A;  4U69 A;  4FKC A;  3S6B A;  4IDY A;  1KQ9 A;  2Q96 A;  5D6F A;  2BHC A;  3CB6 A;  5CNX A;  4FLI A;  4MAT A;  2IW2 A; 
#chains in the Genus database with same CATH homology
 1WKM A;  4ZWU A;  2Q8K A;  4IKR A;  1QXZ A;  4QR8 A;  2GG0 A;  3MAT A;  1WLR A;  2V6C A;  4IU6 A;  5CIK A;  2P99 A;  3PKA A;  3CTZ A;  2OAZ A;  1N51 A;  5FCH A;  2BB7 A;  5JFR A;  4RZZ A;  2B3L A;  4HXX A;  2BN7 A;  2NQ6 A;  4Z7M A;  1WBQ A;  4B28 A;  4FO8 A;  4U6E A;  1R58 A;  4U6J A;  5CDE A;  2BHB A;  4ZWO A;  5CDL A;  4PNC A;  4RGZ 1;  1C27 A;  2GGB A;  5JHU A;  2P9A A;  5E2C A;  2V3Y A;  3OOO A;  1CHM A;  3OVK A;  4A6W A;  1B6A A;  1B59 A;  3BIP A;  4U6C A;  1WL9 A;  2GA2 A;  3FMR A;  4U75 A;  1MAT A;  4U1B A;  2BHD A;  1W2M A;  1BOA A;  2GZ5 A;  4RZY A;  1C24 A;  4U71 A;  1XGN A;  1XGM A;  2Q92 A;  2BWU A;  2EA2 A;  1PV9 A;  5E5B A;  5CDV A;  3FMQ A;  1XGO A;  3RVA A;  2MAT A;  4IF7 A;  1WY2 A;  5CE6 A;  1WN1 A;  3IU7 A;  4FLJ A;  1JAW A;  3IG4 A;  3PKE A;  3MR1 A;  4FLK A;  4IEC A;  2GU4 A;  3O5V A;  4IKS A;  2B3H A;  4U6W A;  4U76 A;  2GG8 A;  3Q6D A;  2ADU A;  3TAV A;  2NQ7 A;  1KP0 A;  2P98 A;  4U6Z A;  2BHA A;  3I7M A;  2EA4 A;  2BWT A;  1XNZ A;  1Y1N A;  2GG7 A;  2B3K A;  2BWS A;  1XGS A;  2BWV A;  4IKT A;  1KQ0 A;  2EVC A;  2G6P A;  3IU8 A;  2EVO A;  2V3Z A;  2V3X A;  2BWW A;  2GGC A;  3MX6 A;  4IKU A;  4S2T P;  2HOW A;  4KM3 A;  1YW9 A;  1W7V A;  1YJ3 A;  1YW7 A;  3PEB A;  2BWX A;  2GG9 A;  5CLS A;  2Q94 A;  4JUQ A;  4U70 A;  2GG5 A;  4FUK A;  1QXY A;  3FM3 A;  3IL0 A;  2Q93 A;  2GG2 A;  3L7G A;  1YW8 A;  1M35 A;  1R5G A;  2GU6 A;  3PKC A;  1YVM A;  2BH3 A;  3IU9 A;  1QXW A;  3TB5 A;  4FO7 A;  4ZNG A;  4FLL A;  1C22 A;  4R60 A;  1C21 A;  1O0X A;  2EVM A;  2GG3 A;  1C23 A;  4A6V A;  1R5H A;  4U73 A;  2GU7 A;  1A16 A;  2DFI A;  2ZSG A;  1WL6 A;  2Q95 A;  1BN5 A;  3PN9 A;  2GU5 A;  4OOK A;  4EGE A;  3BIT A;  4S01 A;  3BIQ A;  3D27 A;  3PKB A;  3QOC A;  5FCF A;  4S00 A;  3CB5 A;  4S2R P;  5D6E A;  4ZWP A;  3ROR A;  4PV4 A;  2GTX A;  2OKN A;  1QZY A;  3PKD A;  5JI6 A;  2BWY A;  4IPA A;  3L24 A;  4U69 A;  4FKC A;  3S6B A;  4IDY A;  1KQ9 A;  2Q96 A;  5D6F A;  2BHC A;  3CB6 A;  5CNX A;  4FLI A;  4MAT A;  2IW2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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