3RVAA

Crystal structure of organophosphorus acid anhydrolase from alteromonas macleodii
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
445
structure length
444
Chain Sequence
SQHKATYQQHIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHKVPPEPNDFWTDSFDIKLLQQADAVEKFLPYDKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAASRQGDNDVPYTSIVALNEHASILHYMQDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKNENMTRDLDLNLEH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Organophosphorus acid anhydrolase
publication title Organophosphorus acid anhydrolase from Alteromonas macleodii: structural study and functional relationship to prolidases.
pubmed doi rcsb
source organism Alteromonas macleodii
total genus 159
structure length 444
sequence length 445
ec nomenclature ec 3.1.8.2: Diisopropyl-fluorophosphatase.
pdb deposition date 2011-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3rvaA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3rvaA02
4IKSA 2Q94A 2GG3A 2Q96A 1CHMA 1WL6A 4RGZ1 1WY2A 4RZYA 1YW9A 3Q6DA 3OVKA 1B59A 2BHAA 3PKBA 4FLKA 1Y1NA 4U71A 2GG9A 1W2MA 4HXXA 1YW7A 1YVMA 4PV4A 3D27A 2BWXA 4ZWOA 4U6WA 4S01A 5CNXA 2Q8KA 4S00A 4FUKA 5CDEA 4S2RP 4S2TP 4B28A 2P99A 2BHDA 1XGOA 4U70A 2GZ5A 2P98A 4FO8A 3RORA 1KQ9A 1C24A 3TAVA 4U73A 4FKCA 2GGCA 1QXZA 4IU6A 4U6EA 4FO7A 2B3KA 2EA2A 4FLJA 2V3XA 3IU7A 4IKTA 1XGSA 4ZNGA 5CLSA 4A6VA 1PV9A 2HOWA 2OAZA 4IPAA 4KM3A 3PN9A 5FCFA 2BWSA 3CB6A 2EVOA 1KQ0A 2BH3A 5CDLA 1BOAA 1R58A 4RZZA 2B3LA 1R5GA 3FMRA 4R60A 4ZWPA 2NQ7A 2V6CA 3BIQA 1R5HA 3IU9A 3PKDA 3I7MA 3PKEA 3S6BA 2IW2A 4JUQA 5CIKA 2GU4A 2GG0A 1N51A 3RVAA 3L24A 3IU8A 4U69A 4U1BA 1W7VA 5JFRA 4ZWUA 1YW8A 2BHBA 4PNCA 5E2CA 2ZSGA 2P9AA 4FLLA 1B6AA 4U76A 3MATA 3O5VA 1BN5A 2BHCA 3MR1A 3CB5A 1WN1A 4U75A 2GG5A 3QOCA 2DFIA 4QR8A 2BWWA 1O0XA 2EVCA 2MATA 4A6WA 4U6CA 5FCHA 4EGEA 2GU6A 3BIPA 2BWYA 2GU5A 4MATA 5D6FA 4IECA 3TB5A 3PEBA 1XGNA 4IF7A 5CE6A 2BWVA 5D6EA 2GG2A 2Q95A 4IKUA 2EA4A 1WL9A 1WLRA 2BWUA 3IG4A 1QXWA 1QXYA 3BITA 5CDVA 3CTZA 4IKRA 4IDYA 3MX6A 1XGMA 1XNZA 3PKCA 3IL0A 1MATA 2GA2A 2EVMA 1A16A 2BN7A 1YJ3A 2GG7A 2Q92A 1M35A 4Z7MA 2B3HA 1KP0A 1C21A 1C23A 3L7GA 3OOOA 1C22A 2NQ6A 2Q93A 1C27A 1QZYA 3FM3A 3FMQA 2V3YA 1JAWA 2GGBA 1WKMA 2OKNA 5E5BA 2BB7A 4OOKA 4U6ZA 2V3ZA 2ADUA 5JHUA 3PKAA 1WBQA 5JI6A 2G6PA 2BWTA 2GG8A 4FLIA 4U6JA 2GU7A 2GTXA
chains in the Genus database with same CATH superfamily
4IKSA 2Q94A 2GG3A 2Q96A 1CHMA 1WL6A 4RGZ1 1WY2A 4RZYA 1YW9A 3Q6DA 3OVKA 1B59A 2BHAA 3PKBA 4FLKA 1Y1NA 4U71A 2GG9A 1W2MA 4HXXA 1YW7A 1YVMA 4PV4A 3D27A 2BWXA 4ZWOA 4U6WA 4S01A 5CNXA 2Q8KA 4S00A 4FUKA 5CDEA 4S2RP 4S2TP 4B28A 2P99A 2BHDA 1XGOA 4U70A 2GZ5A 2P98A 4FO8A 3RORA 1KQ9A 1C24A 3TAVA 4U73A 4FKCA 2GGCA 1QXZA 4IU6A 4U6EA 4FO7A 2B3KA 2EA2A 4FLJA 2V3XA 3IU7A 4IKTA 1XGSA 4ZNGA 5CLSA 4A6VA 1PV9A 2HOWA 2OAZA 4IPAA 4KM3A 3PN9A 5FCFA 2BWSA 3CB6A 2EVOA 1KQ0A 2BH3A 5CDLA 1BOAA 1R58A 4RZZA 2B3LA 1R5GA 3FMRA 4R60A 4ZWPA 2NQ7A 2V6CA 3BIQA 1R5HA 3IU9A 3PKDA 3I7MA 3PKEA 3S6BA 2IW2A 4JUQA 5CIKA 2GU4A 2GG0A 1N51A 3RVAA 3L24A 3IU8A 4U69A 4U1BA 1W7VA 5JFRA 4ZWUA 1YW8A 2BHBA 4PNCA 5E2CA 2ZSGA 2P9AA 4FLLA 1B6AA 4U76A 3MATA 3O5VA 1BN5A 2BHCA 3MR1A 3CB5A 1WN1A 4U75A 2GG5A 3QOCA 2DFIA 4QR8A 2BWWA 1O0XA 2EVCA 2MATA 4A6WA 4U6CA 5FCHA 4EGEA 2GU6A 3BIPA 2BWYA 2GU5A 4MATA 5D6FA 4IECA 3TB5A 3PEBA 1XGNA 4IF7A 5CE6A 2BWVA 5D6EA 2GG2A 2Q95A 4IKUA 2EA4A 1WL9A 1WLRA 2BWUA 3IG4A 1QXWA 1QXYA 3BITA 5CDVA 3CTZA 4IKRA 4IDYA 3MX6A 1XGMA 1XNZA 3PKCA 3IL0A 1MATA 2GA2A 2EVMA 1A16A 2BN7A 1YJ3A 2GG7A 2Q92A 1M35A 4Z7MA 2B3HA 1KP0A 1C21A 1C23A 3L7GA 3OOOA 1C22A 2NQ6A 2Q93A 1C27A 1QZYA 3FM3A 3FMQA 2V3YA 1JAWA 2GGBA 1WKMA 2OKNA 5E5BA 2BB7A 4OOKA 4U6ZA 2V3ZA 2ADUA 5JHUA 3PKAA 1WBQA 5JI6A 2G6PA 2BWTA 2GG8A 4FLIA 4U6JA 2GU7A 2GTXA
chains in the Genus database with same CATH topology
4IKSA 2Q94A 2GG3A 2Q96A 1CHMA 1WL6A 4RGZ1 1WY2A 4RZYA 1YW9A 3Q6DA 3OVKA 1B59A 2BHAA 3PKBA 4FLKA 1Y1NA 4U71A 2GG9A 1W2MA 4HXXA 1YW7A 1YVMA 4PV4A 3D27A 2BWXA 4ZWOA 4U6WA 4S01A 5CNXA 2Q8KA 4S00A 4FUKA 5CDEA 4S2RP 4S2TP 4B28A 2P99A 2BHDA 1XGOA 4U70A 2GZ5A 2P98A 4FO8A 3RORA 1KQ9A 1C24A 3TAVA 4U73A 4FKCA 2GGCA 1QXZA 4IU6A 4U6EA 4FO7A 2B3KA 2EA2A 4FLJA 2V3XA 3IU7A 4IKTA 1XGSA 4ZNGA 5CLSA 4A6VA 1PV9A 2HOWA 2OAZA 4IPAA 4KM3A 3PN9A 5FCFA 2BWSA 3CB6A 2EVOA 1KQ0A 2BH3A 5CDLA 1BOAA 1R58A 4RZZA 2B3LA 1R5GA 3FMRA 4R60A 4ZWPA 2NQ7A 2V6CA 3BIQA 1R5HA 3IU9A 3PKDA 3I7MA 3PKEA 3S6BA 2IW2A 4JUQA 5CIKA 2GU4A 2GG0A 1N51A 3RVAA 3L24A 3IU8A 4U69A 4U1BA 1W7VA 5JFRA 4ZWUA 1YW8A 2BHBA 4PNCA 5E2CA 2ZSGA 2P9AA 4FLLA 1B6AA 4U76A 3MATA 3O5VA 1BN5A 2BHCA 3MR1A 3CB5A 1WN1A 4U75A 2GG5A 3QOCA 2DFIA 4QR8A 2BWWA 1O0XA 2EVCA 2MATA 4A6WA 4U6CA 5FCHA 4EGEA 2GU6A 3BIPA 2BWYA 2GU5A 4MATA 5D6FA 4IECA 3TB5A 3PEBA 1XGNA 4IF7A 5CE6A 2BWVA 5D6EA 2GG2A 2Q95A 4IKUA 2EA4A 1WL9A 1WLRA 2BWUA 3IG4A 1QXWA 1QXYA 3BITA 5CDVA 3CTZA 4IKRA 4IDYA 3MX6A 1XGMA 1XNZA 3PKCA 3IL0A 1MATA 2GA2A 2EVMA 1A16A 2BN7A 1YJ3A 2GG7A 2Q92A 1M35A 4Z7MA 2B3HA 1KP0A 1C21A 1C23A 3L7GA 3OOOA 1C22A 2NQ6A 2Q93A 1C27A 1QZYA 3FM3A 3FMQA 2V3YA 1JAWA 2GGBA 1WKMA 2OKNA 5E5BA 2BB7A 4OOKA 4U6ZA 2V3ZA 2ADUA 5JHUA 3PKAA 1WBQA 5JI6A 2G6PA 2BWTA 2GG8A 4FLIA 4U6JA 2GU7A 2GTXA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4IKS A;  2Q94 A;  2GG3 A;  2Q96 A;  1CHM A;  1WL6 A;  4RGZ 1;  1WY2 A;  4RZY A;  1YW9 A;  3Q6D A;  3OVK A;  1B59 A;  2BHA A;  3PKB A;  4FLK A;  1Y1N A;  4U71 A;  2GG9 A;  1W2M A;  4HXX A;  1YW7 A;  1YVM A;  4PV4 A;  3D27 A;  2BWX A;  4ZWO A;  4U6W A;  4S01 A;  5CNX A;  2Q8K A;  4S00 A;  4FUK A;  5CDE A;  4S2R P;  4S2T P;  4B28 A;  2P99 A;  2BHD A;  1XGO A;  4U70 A;  2GZ5 A;  2P98 A;  4FO8 A;  3ROR A;  1KQ9 A;  1C24 A;  3TAV A;  4U73 A;  4FKC A;  2GGC A;  1QXZ A;  4IU6 A;  4U6E A;  4FO7 A;  2B3K A;  2EA2 A;  4FLJ A;  2V3X A;  3IU7 A;  4IKT A;  1XGS A;  4ZNG A;  5CLS A;  4A6V A;  1PV9 A;  2HOW A;  2OAZ A;  4IPA A;  4KM3 A;  3PN9 A;  5FCF A;  2BWS A;  3CB6 A;  2EVO A;  1KQ0 A;  2BH3 A;  5CDL A;  1BOA A;  1R58 A;  4RZZ A;  2B3L A;  1R5G A;  3FMR A;  4R60 A;  4ZWP A;  2NQ7 A;  2V6C A;  3BIQ A;  1R5H A;  3IU9 A;  3PKD A;  3I7M A;  3PKE A;  3S6B A;  2IW2 A;  4JUQ A;  5CIK A;  2GU4 A;  2GG0 A;  1N51 A;  3RVA A;  3L24 A;  3IU8 A;  4U69 A;  4U1B A;  1W7V A;  5JFR A;  4ZWU A;  1YW8 A;  2BHB A;  4PNC A;  5E2C A;  2ZSG A;  2P9A A;  4FLL A;  1B6A A;  4U76 A;  3MAT A;  3O5V A;  1BN5 A;  2BHC A;  3MR1 A;  3CB5 A;  1WN1 A;  4U75 A;  2GG5 A;  3QOC A;  2DFI A;  4QR8 A;  2BWW A;  1O0X A;  2EVC A;  2MAT A;  4A6W A;  4U6C A;  5FCH A;  4EGE A;  2GU6 A;  3BIP A;  2BWY A;  2GU5 A;  4MAT A;  5D6F A;  4IEC A;  3TB5 A;  3PEB A;  1XGN A;  4IF7 A;  5CE6 A;  2BWV A;  5D6E A;  2GG2 A;  2Q95 A;  4IKU A;  2EA4 A;  1WL9 A;  1WLR A;  2BWU A;  3IG4 A;  1QXW A;  1QXY A;  3BIT A;  5CDV A;  3CTZ A;  4IKR A;  4IDY A;  3MX6 A;  1XGM A;  1XNZ A;  3PKC A;  3IL0 A;  1MAT A;  2GA2 A;  2EVM A;  1A16 A;  2BN7 A;  1YJ3 A;  2GG7 A;  2Q92 A;  1M35 A;  4Z7M A;  2B3H A;  1KP0 A;  1C21 A;  1C23 A;  3L7G A;  3OOO A;  1C22 A;  2NQ6 A;  2Q93 A;  1C27 A;  1QZY A;  3FM3 A;  3FMQ A;  2V3Y A;  1JAW A;  2GGB A;  1WKM A;  2OKN A;  5E5B A;  2BB7 A;  4OOK A;  4U6Z A;  2V3Z A;  2ADU A;  5JHU A;  3PKA A;  1WBQ A;  5JI6 A;  2G6P A;  2BWT A;  2GG8 A;  4FLI A;  4U6J A;  2GU7 A;  2GTX A; 
#chains in the Genus database with same CATH topology
 4IKS A;  2Q94 A;  2GG3 A;  2Q96 A;  1CHM A;  1WL6 A;  4RGZ 1;  1WY2 A;  4RZY A;  1YW9 A;  3Q6D A;  3OVK A;  1B59 A;  2BHA A;  3PKB A;  4FLK A;  1Y1N A;  4U71 A;  2GG9 A;  1W2M A;  4HXX A;  1YW7 A;  1YVM A;  4PV4 A;  3D27 A;  2BWX A;  4ZWO A;  4U6W A;  4S01 A;  5CNX A;  2Q8K A;  4S00 A;  4FUK A;  5CDE A;  4S2R P;  4S2T P;  4B28 A;  2P99 A;  2BHD A;  1XGO A;  4U70 A;  2GZ5 A;  2P98 A;  4FO8 A;  3ROR A;  1KQ9 A;  1C24 A;  3TAV A;  4U73 A;  4FKC A;  2GGC A;  1QXZ A;  4IU6 A;  4U6E A;  4FO7 A;  2B3K A;  2EA2 A;  4FLJ A;  2V3X A;  3IU7 A;  4IKT A;  1XGS A;  4ZNG A;  5CLS A;  4A6V A;  1PV9 A;  2HOW A;  2OAZ A;  4IPA A;  4KM3 A;  3PN9 A;  5FCF A;  2BWS A;  3CB6 A;  2EVO A;  1KQ0 A;  2BH3 A;  5CDL A;  1BOA A;  1R58 A;  4RZZ A;  2B3L A;  1R5G A;  3FMR A;  4R60 A;  4ZWP A;  2NQ7 A;  2V6C A;  3BIQ A;  1R5H A;  3IU9 A;  3PKD A;  3I7M A;  3PKE A;  3S6B A;  2IW2 A;  4JUQ A;  5CIK A;  2GU4 A;  2GG0 A;  1N51 A;  3RVA A;  3L24 A;  3IU8 A;  4U69 A;  4U1B A;  1W7V A;  5JFR A;  4ZWU A;  1YW8 A;  2BHB A;  4PNC A;  5E2C A;  2ZSG A;  2P9A A;  4FLL A;  1B6A A;  4U76 A;  3MAT A;  3O5V A;  1BN5 A;  2BHC A;  3MR1 A;  3CB5 A;  1WN1 A;  4U75 A;  2GG5 A;  3QOC A;  2DFI A;  4QR8 A;  2BWW A;  1O0X A;  2EVC A;  2MAT A;  4A6W A;  4U6C A;  5FCH A;  4EGE A;  2GU6 A;  3BIP A;  2BWY A;  2GU5 A;  4MAT A;  5D6F A;  4IEC A;  3TB5 A;  3PEB A;  1XGN A;  4IF7 A;  5CE6 A;  2BWV A;  5D6E A;  2GG2 A;  2Q95 A;  4IKU A;  2EA4 A;  1WL9 A;  1WLR A;  2BWU A;  3IG4 A;  1QXW A;  1QXY A;  3BIT A;  5CDV A;  3CTZ A;  4IKR A;  4IDY A;  3MX6 A;  1XGM A;  1XNZ A;  3PKC A;  3IL0 A;  1MAT A;  2GA2 A;  2EVM A;  1A16 A;  2BN7 A;  1YJ3 A;  2GG7 A;  2Q92 A;  1M35 A;  4Z7M A;  2B3H A;  1KP0 A;  1C21 A;  1C23 A;  3L7G A;  3OOO A;  1C22 A;  2NQ6 A;  2Q93 A;  1C27 A;  1QZY A;  3FM3 A;  3FMQ A;  2V3Y A;  1JAW A;  2GGB A;  1WKM A;  2OKN A;  5E5B A;  2BB7 A;  4OOK A;  4U6Z A;  2V3Z A;  2ADU A;  5JHU A;  3PKA A;  1WBQ A;  5JI6 A;  2G6P A;  2BWT A;  2GG8 A;  4FLI A;  4U6J A;  2GU7 A;  2GTX A; 
#chains in the Genus database with same CATH homology
 4IKS A;  2Q94 A;  2GG3 A;  2Q96 A;  1CHM A;  1WL6 A;  4RGZ 1;  1WY2 A;  4RZY A;  1YW9 A;  3Q6D A;  3OVK A;  1B59 A;  2BHA A;  3PKB A;  4FLK A;  1Y1N A;  4U71 A;  2GG9 A;  1W2M A;  4HXX A;  1YW7 A;  1YVM A;  4PV4 A;  3D27 A;  2BWX A;  4ZWO A;  4U6W A;  4S01 A;  5CNX A;  2Q8K A;  4S00 A;  4FUK A;  5CDE A;  4S2R P;  4S2T P;  4B28 A;  2P99 A;  2BHD A;  1XGO A;  4U70 A;  2GZ5 A;  2P98 A;  4FO8 A;  3ROR A;  1KQ9 A;  1C24 A;  3TAV A;  4U73 A;  4FKC A;  2GGC A;  1QXZ A;  4IU6 A;  4U6E A;  4FO7 A;  2B3K A;  2EA2 A;  4FLJ A;  2V3X A;  3IU7 A;  4IKT A;  1XGS A;  4ZNG A;  5CLS A;  4A6V A;  1PV9 A;  2HOW A;  2OAZ A;  4IPA A;  4KM3 A;  3PN9 A;  5FCF A;  2BWS A;  3CB6 A;  2EVO A;  1KQ0 A;  2BH3 A;  5CDL A;  1BOA A;  1R58 A;  4RZZ A;  2B3L A;  1R5G A;  3FMR A;  4R60 A;  4ZWP A;  2NQ7 A;  2V6C A;  3BIQ A;  1R5H A;  3IU9 A;  3PKD A;  3I7M A;  3PKE A;  3S6B A;  2IW2 A;  4JUQ A;  5CIK A;  2GU4 A;  2GG0 A;  1N51 A;  3RVA A;  3L24 A;  3IU8 A;  4U69 A;  4U1B A;  1W7V A;  5JFR A;  4ZWU A;  1YW8 A;  2BHB A;  4PNC A;  5E2C A;  2ZSG A;  2P9A A;  4FLL A;  1B6A A;  4U76 A;  3MAT A;  3O5V A;  1BN5 A;  2BHC A;  3MR1 A;  3CB5 A;  1WN1 A;  4U75 A;  2GG5 A;  3QOC A;  2DFI A;  4QR8 A;  2BWW A;  1O0X A;  2EVC A;  2MAT A;  4A6W A;  4U6C A;  5FCH A;  4EGE A;  2GU6 A;  3BIP A;  2BWY A;  2GU5 A;  4MAT A;  5D6F A;  4IEC A;  3TB5 A;  3PEB A;  1XGN A;  4IF7 A;  5CE6 A;  2BWV A;  5D6E A;  2GG2 A;  2Q95 A;  4IKU A;  2EA4 A;  1WL9 A;  1WLR A;  2BWU A;  3IG4 A;  1QXW A;  1QXY A;  3BIT A;  5CDV A;  3CTZ A;  4IKR A;  4IDY A;  3MX6 A;  1XGM A;  1XNZ A;  3PKC A;  3IL0 A;  1MAT A;  2GA2 A;  2EVM A;  1A16 A;  2BN7 A;  1YJ3 A;  2GG7 A;  2Q92 A;  1M35 A;  4Z7M A;  2B3H A;  1KP0 A;  1C21 A;  1C23 A;  3L7G A;  3OOO A;  1C22 A;  2NQ6 A;  2Q93 A;  1C27 A;  1QZY A;  3FM3 A;  3FMQ A;  2V3Y A;  1JAW A;  2GGB A;  1WKM A;  2OKN A;  5E5B A;  2BB7 A;  4OOK A;  4U6Z A;  2V3Z A;  2ADU A;  5JHU A;  3PKA A;  1WBQ A;  5JI6 A;  2G6P A;  2BWT A;  2GG8 A;  4FLI A;  4U6J A;  2GU7 A;  2GTX A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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