3RVAA

Crystal structure of organophosphorus acid anhydrolase from alteromonas macleodii
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
445
structure length
444
Chain Sequence
SQHKATYQQHIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHKVPPEPNDFWTDSFDIKLLQQADAVEKFLPYDKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAASRQGDNDVPYTSIVALNEHASILHYMQDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKNENMTRDLDLNLEH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Organophosphorus acid anhydrolase from Alteromonas macleodii: structural study and functional relationship to prolidases.
pubmed doi rcsb
source organism Alteromonas macleodii
molecule tags Hydrolase
molecule keywords Organophosphorus acid anhydrolase
total genus 159
structure length 444
sequence length 445
ec nomenclature ec 3.1.8.2: Diisopropyl-fluorophosphatase.
pdb deposition date 2011-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3rvaA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3rvaA02
4RZZA 3BITA 2GU5A 4U6JA 2IW2A 2GU4A 1XGSA 1PV9A 2GG9A 2GG0A 3D27A 4Z7MA 3PKEA 2Q93A 5CLSA 5D6FA 3IG4A 1MATA 1QZYA 4JUQA 4QR8A 4U6EA 3OVKA 2Q94A 2V3YA 2BH3A 2BWVA 3QOCA 2B3LA 3PKCA 4ZNGA 5JI6A 2P9AA 1C27A 2BWYA 2GU7A 2EVOA 1WLRA 1XGOA 1WY2A 4IECA 1JAWA 2HOWA 4A6WA 5D6EA 5CNXA 3RVAA 5JHUA 4FLIA 3I7MA 2BWSA 4MATA 1WKMA 4FO7A 1Y1NA 5E2CA 1R5GA 3FMRA 2V3ZA 2EA2A 4R60A 2Q92A 4IU6A 2B3KA 1W7VA 5E5BA 2BWUA 2GG3A 4U6CA 4PNCA 4U6ZA 2Q96A 4U70A 3O5VA 4A6VA 4U76A 2G6PA 1CHMA 3L7GA 5CDVA 3L24A 2BN7A 2GGBA 4FLLA 3TB5A 3CB6A 2GZ5A 1KQ9A 2V6CA 4IKRA 4ZWPA 5CDLA 3MATA 3IU7A 4IKTA 5JFRA 1YW8A 2Q8KA 1WL9A 4FLJA 1R5HA 1C21A 1KQ0A 2GU6A 1QXYA 1WL6A 4RGZ1 2GTXA 3MR1A 4FUKA 1YVMA 2GGCA 4U75A 2BWXA 5CE6A 2BHCA 3IU8A 3RORA 4FO8A 1YW7A 1C24A 3FM3A 2GA2A 2OAZA 4IKUA 3BIQA 3CTZA 1QXWA 3IU9A 1WN1A 4S2RP 3CB5A 1BOAA 1C22A 4IDYA 4U71A 3PN9A 4ZWUA 5CDEA 1QXZA 4IPAA 3TAVA 2V3XA 1W2MA 2Q95A 5CIKA 4S00A 2NQ6A 1KP0A 4S2TP 3BIPA 1M35A 3IL0A 3PKBA 4IKSA 1XNZA 2GG7A 2ADUA 1O0XA 4S01A 2BHAA 3S6BA 2DFIA 4U1BA 4EGEA 4ZWOA 4PV4A 3PKDA 1A16A 4U69A 2EA4A 5FCHA 4U73A 4U6WA 1R58A 1YJ3A 4HXXA 1B6AA 4FKCA 1WBQA 4FLKA 1YW9A 2GG5A 3PEBA 4KM3A 2GG8A 2OKNA 4RZYA 2P99A 3FMQA 1XGMA 4IF7A 2BWWA 1N51A 2EVMA 4OOKA 2BHBA 2ZSGA 3Q6DA 2BB7A 1B59A 2BWTA 1C23A 3PKAA 3OOOA 2GG2A 3MX6A 2B3HA 2BHDA 2NQ7A 1XGNA 2EVCA 5FCFA 2P98A 1BN5A 4B28A 2MATA
chains in the Genus database with same CATH superfamily
4RZZA 3BITA 2GU5A 4U6JA 2IW2A 2GU4A 1XGSA 1PV9A 2GG9A 2GG0A 3D27A 4Z7MA 3PKEA 2Q93A 5CLSA 5D6FA 3IG4A 1MATA 1QZYA 4JUQA 4QR8A 4U6EA 3OVKA 2Q94A 2V3YA 2BH3A 2BWVA 3QOCA 2B3LA 3PKCA 4ZNGA 5JI6A 2P9AA 1C27A 2BWYA 2GU7A 2EVOA 1WLRA 1XGOA 1WY2A 4IECA 1JAWA 2HOWA 4A6WA 5D6EA 5CNXA 3RVAA 5JHUA 4FLIA 3I7MA 2BWSA 4MATA 1WKMA 4FO7A 1Y1NA 5E2CA 1R5GA 3FMRA 2V3ZA 2EA2A 4R60A 2Q92A 4IU6A 2B3KA 1W7VA 5E5BA 2BWUA 2GG3A 4U6CA 4PNCA 4U6ZA 2Q96A 4U70A 3O5VA 4A6VA 4U76A 2G6PA 1CHMA 3L7GA 5CDVA 3L24A 2BN7A 2GGBA 4FLLA 3TB5A 3CB6A 2GZ5A 1KQ9A 2V6CA 4IKRA 4ZWPA 5CDLA 3MATA 3IU7A 4IKTA 5JFRA 1YW8A 2Q8KA 1WL9A 4FLJA 1R5HA 1C21A 1KQ0A 2GU6A 1QXYA 1WL6A 4RGZ1 2GTXA 3MR1A 4FUKA 1YVMA 2GGCA 4U75A 2BWXA 5CE6A 2BHCA 3IU8A 3RORA 4FO8A 1YW7A 1C24A 3FM3A 2GA2A 2OAZA 4IKUA 3BIQA 3CTZA 1QXWA 3IU9A 1WN1A 4S2RP 3CB5A 1BOAA 1C22A 4IDYA 4U71A 3PN9A 4ZWUA 5CDEA 1QXZA 4IPAA 3TAVA 2V3XA 1W2MA 2Q95A 5CIKA 4S00A 2NQ6A 1KP0A 4S2TP 3BIPA 1M35A 3IL0A 3PKBA 4IKSA 1XNZA 2GG7A 2ADUA 1O0XA 4S01A 2BHAA 3S6BA 2DFIA 4U1BA 4EGEA 4ZWOA 4PV4A 3PKDA 1A16A 4U69A 2EA4A 5FCHA 4U73A 4U6WA 1R58A 1YJ3A 4HXXA 1B6AA 4FKCA 1WBQA 4FLKA 1YW9A 2GG5A 3PEBA 4KM3A 2GG8A 2OKNA 4RZYA 2P99A 3FMQA 1XGMA 4IF7A 2BWWA 1N51A 2EVMA 4OOKA 2BHBA 2ZSGA 3Q6DA 2BB7A 1B59A 2BWTA 1C23A 3PKAA 3OOOA 2GG2A 3MX6A 2B3HA 2BHDA 2NQ7A 1XGNA 2EVCA 5FCFA 2P98A 1BN5A 4B28A 2MATA
chains in the Genus database with same CATH topology
4RZZA 3BITA 2GU5A 4U6JA 2IW2A 2GU4A 1XGSA 1PV9A 2GG9A 2GG0A 3D27A 4Z7MA 3PKEA 2Q93A 5CLSA 5D6FA 3IG4A 1MATA 1QZYA 4JUQA 4QR8A 4U6EA 3OVKA 2Q94A 2V3YA 2BH3A 2BWVA 3QOCA 2B3LA 3PKCA 4ZNGA 5JI6A 2P9AA 1C27A 2BWYA 2GU7A 2EVOA 1WLRA 1XGOA 1WY2A 4IECA 1JAWA 2HOWA 4A6WA 5D6EA 5CNXA 3RVAA 5JHUA 4FLIA 3I7MA 2BWSA 4MATA 1WKMA 4FO7A 1Y1NA 5E2CA 1R5GA 3FMRA 2V3ZA 2EA2A 4R60A 2Q92A 4IU6A 2B3KA 1W7VA 5E5BA 2BWUA 2GG3A 4U6CA 4PNCA 4U6ZA 2Q96A 4U70A 3O5VA 4A6VA 4U76A 2G6PA 1CHMA 3L7GA 5CDVA 3L24A 2BN7A 2GGBA 4FLLA 3TB5A 3CB6A 2GZ5A 1KQ9A 2V6CA 4IKRA 4ZWPA 5CDLA 3MATA 3IU7A 4IKTA 5JFRA 1YW8A 2Q8KA 1WL9A 4FLJA 1R5HA 1C21A 1KQ0A 2GU6A 1QXYA 1WL6A 4RGZ1 2GTXA 3MR1A 4FUKA 1YVMA 2GGCA 4U75A 2BWXA 5CE6A 2BHCA 3IU8A 3RORA 4FO8A 1YW7A 1C24A 3FM3A 2GA2A 2OAZA 4IKUA 3BIQA 3CTZA 1QXWA 3IU9A 1WN1A 4S2RP 3CB5A 1BOAA 1C22A 4IDYA 4U71A 3PN9A 4ZWUA 5CDEA 1QXZA 4IPAA 3TAVA 2V3XA 1W2MA 2Q95A 5CIKA 4S00A 2NQ6A 1KP0A 4S2TP 3BIPA 1M35A 3IL0A 3PKBA 4IKSA 1XNZA 2GG7A 2ADUA 1O0XA 4S01A 2BHAA 3S6BA 2DFIA 4U1BA 4EGEA 4ZWOA 4PV4A 3PKDA 1A16A 4U69A 2EA4A 5FCHA 4U73A 4U6WA 1R58A 1YJ3A 4HXXA 1B6AA 4FKCA 1WBQA 4FLKA 1YW9A 2GG5A 3PEBA 4KM3A 2GG8A 2OKNA 4RZYA 2P99A 3FMQA 1XGMA 4IF7A 2BWWA 1N51A 2EVMA 4OOKA 2BHBA 2ZSGA 3Q6DA 2BB7A 1B59A 2BWTA 1C23A 3PKAA 3OOOA 2GG2A 3MX6A 2B3HA 2BHDA 2NQ7A 1XGNA 2EVCA 5FCFA 2P98A 1BN5A 4B28A 2MATA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RZZ A;  3BIT A;  2GU5 A;  4U6J A;  2IW2 A;  2GU4 A;  1XGS A;  1PV9 A;  2GG9 A;  2GG0 A;  3D27 A;  4Z7M A;  3PKE A;  2Q93 A;  5CLS A;  5D6F A;  3IG4 A;  1MAT A;  1QZY A;  4JUQ A;  4QR8 A;  4U6E A;  3OVK A;  2Q94 A;  2V3Y A;  2BH3 A;  2BWV A;  3QOC A;  2B3L A;  3PKC A;  4ZNG A;  5JI6 A;  2P9A A;  1C27 A;  2BWY A;  2GU7 A;  2EVO A;  1WLR A;  1XGO A;  1WY2 A;  4IEC A;  1JAW A;  2HOW A;  4A6W A;  5D6E A;  5CNX A;  3RVA A;  5JHU A;  4FLI A;  3I7M A;  2BWS A;  4MAT A;  1WKM A;  4FO7 A;  1Y1N A;  5E2C A;  1R5G A;  3FMR A;  2V3Z A;  2EA2 A;  4R60 A;  2Q92 A;  4IU6 A;  2B3K A;  1W7V A;  5E5B A;  2BWU A;  2GG3 A;  4U6C A;  4PNC A;  4U6Z A;  2Q96 A;  4U70 A;  3O5V A;  4A6V A;  4U76 A;  2G6P A;  1CHM A;  3L7G A;  5CDV A;  3L24 A;  2BN7 A;  2GGB A;  4FLL A;  3TB5 A;  3CB6 A;  2GZ5 A;  1KQ9 A;  2V6C A;  4IKR A;  4ZWP A;  5CDL A;  3MAT A;  3IU7 A;  4IKT A;  5JFR A;  1YW8 A;  2Q8K A;  1WL9 A;  4FLJ A;  1R5H A;  1C21 A;  1KQ0 A;  2GU6 A;  1QXY A;  1WL6 A;  4RGZ 1;  2GTX A;  3MR1 A;  4FUK A;  1YVM A;  2GGC A;  4U75 A;  2BWX A;  5CE6 A;  2BHC A;  3IU8 A;  3ROR A;  4FO8 A;  1YW7 A;  1C24 A;  3FM3 A;  2GA2 A;  2OAZ A;  4IKU A;  3BIQ A;  3CTZ A;  1QXW A;  3IU9 A;  1WN1 A;  4S2R P;  3CB5 A;  1BOA A;  1C22 A;  4IDY A;  4U71 A;  3PN9 A;  4ZWU A;  5CDE A;  1QXZ A;  4IPA A;  3TAV A;  2V3X A;  1W2M A;  2Q95 A;  5CIK A;  4S00 A;  2NQ6 A;  1KP0 A;  4S2T P;  3BIP A;  1M35 A;  3IL0 A;  3PKB A;  4IKS A;  1XNZ A;  2GG7 A;  2ADU A;  1O0X A;  4S01 A;  2BHA A;  3S6B A;  2DFI A;  4U1B A;  4EGE A;  4ZWO A;  4PV4 A;  3PKD A;  1A16 A;  4U69 A;  2EA4 A;  5FCH A;  4U73 A;  4U6W A;  1R58 A;  1YJ3 A;  4HXX A;  1B6A A;  4FKC A;  1WBQ A;  4FLK A;  1YW9 A;  2GG5 A;  3PEB A;  4KM3 A;  2GG8 A;  2OKN A;  4RZY A;  2P99 A;  3FMQ A;  1XGM A;  4IF7 A;  2BWW A;  1N51 A;  2EVM A;  4OOK A;  2BHB A;  2ZSG A;  3Q6D A;  2BB7 A;  1B59 A;  2BWT A;  1C23 A;  3PKA A;  3OOO A;  2GG2 A;  3MX6 A;  2B3H A;  2BHD A;  2NQ7 A;  1XGN A;  2EVC A;  5FCF A;  2P98 A;  1BN5 A;  4B28 A;  2MAT A; 
#chains in the Genus database with same CATH topology
 4RZZ A;  3BIT A;  2GU5 A;  4U6J A;  2IW2 A;  2GU4 A;  1XGS A;  1PV9 A;  2GG9 A;  2GG0 A;  3D27 A;  4Z7M A;  3PKE A;  2Q93 A;  5CLS A;  5D6F A;  3IG4 A;  1MAT A;  1QZY A;  4JUQ A;  4QR8 A;  4U6E A;  3OVK A;  2Q94 A;  2V3Y A;  2BH3 A;  2BWV A;  3QOC A;  2B3L A;  3PKC A;  4ZNG A;  5JI6 A;  2P9A A;  1C27 A;  2BWY A;  2GU7 A;  2EVO A;  1WLR A;  1XGO A;  1WY2 A;  4IEC A;  1JAW A;  2HOW A;  4A6W A;  5D6E A;  5CNX A;  3RVA A;  5JHU A;  4FLI A;  3I7M A;  2BWS A;  4MAT A;  1WKM A;  4FO7 A;  1Y1N A;  5E2C A;  1R5G A;  3FMR A;  2V3Z A;  2EA2 A;  4R60 A;  2Q92 A;  4IU6 A;  2B3K A;  1W7V A;  5E5B A;  2BWU A;  2GG3 A;  4U6C A;  4PNC A;  4U6Z A;  2Q96 A;  4U70 A;  3O5V A;  4A6V A;  4U76 A;  2G6P A;  1CHM A;  3L7G A;  5CDV A;  3L24 A;  2BN7 A;  2GGB A;  4FLL A;  3TB5 A;  3CB6 A;  2GZ5 A;  1KQ9 A;  2V6C A;  4IKR A;  4ZWP A;  5CDL A;  3MAT A;  3IU7 A;  4IKT A;  5JFR A;  1YW8 A;  2Q8K A;  1WL9 A;  4FLJ A;  1R5H A;  1C21 A;  1KQ0 A;  2GU6 A;  1QXY A;  1WL6 A;  4RGZ 1;  2GTX A;  3MR1 A;  4FUK A;  1YVM A;  2GGC A;  4U75 A;  2BWX A;  5CE6 A;  2BHC A;  3IU8 A;  3ROR A;  4FO8 A;  1YW7 A;  1C24 A;  3FM3 A;  2GA2 A;  2OAZ A;  4IKU A;  3BIQ A;  3CTZ A;  1QXW A;  3IU9 A;  1WN1 A;  4S2R P;  3CB5 A;  1BOA A;  1C22 A;  4IDY A;  4U71 A;  3PN9 A;  4ZWU A;  5CDE A;  1QXZ A;  4IPA A;  3TAV A;  2V3X A;  1W2M A;  2Q95 A;  5CIK A;  4S00 A;  2NQ6 A;  1KP0 A;  4S2T P;  3BIP A;  1M35 A;  3IL0 A;  3PKB A;  4IKS A;  1XNZ A;  2GG7 A;  2ADU A;  1O0X A;  4S01 A;  2BHA A;  3S6B A;  2DFI A;  4U1B A;  4EGE A;  4ZWO A;  4PV4 A;  3PKD A;  1A16 A;  4U69 A;  2EA4 A;  5FCH A;  4U73 A;  4U6W A;  1R58 A;  1YJ3 A;  4HXX A;  1B6A A;  4FKC A;  1WBQ A;  4FLK A;  1YW9 A;  2GG5 A;  3PEB A;  4KM3 A;  2GG8 A;  2OKN A;  4RZY A;  2P99 A;  3FMQ A;  1XGM A;  4IF7 A;  2BWW A;  1N51 A;  2EVM A;  4OOK A;  2BHB A;  2ZSG A;  3Q6D A;  2BB7 A;  1B59 A;  2BWT A;  1C23 A;  3PKA A;  3OOO A;  2GG2 A;  3MX6 A;  2B3H A;  2BHD A;  2NQ7 A;  1XGN A;  2EVC A;  5FCF A;  2P98 A;  1BN5 A;  4B28 A;  2MAT A; 
#chains in the Genus database with same CATH homology
 4RZZ A;  3BIT A;  2GU5 A;  4U6J A;  2IW2 A;  2GU4 A;  1XGS A;  1PV9 A;  2GG9 A;  2GG0 A;  3D27 A;  4Z7M A;  3PKE A;  2Q93 A;  5CLS A;  5D6F A;  3IG4 A;  1MAT A;  1QZY A;  4JUQ A;  4QR8 A;  4U6E A;  3OVK A;  2Q94 A;  2V3Y A;  2BH3 A;  2BWV A;  3QOC A;  2B3L A;  3PKC A;  4ZNG A;  5JI6 A;  2P9A A;  1C27 A;  2BWY A;  2GU7 A;  2EVO A;  1WLR A;  1XGO A;  1WY2 A;  4IEC A;  1JAW A;  2HOW A;  4A6W A;  5D6E A;  5CNX A;  3RVA A;  5JHU A;  4FLI A;  3I7M A;  2BWS A;  4MAT A;  1WKM A;  4FO7 A;  1Y1N A;  5E2C A;  1R5G A;  3FMR A;  2V3Z A;  2EA2 A;  4R60 A;  2Q92 A;  4IU6 A;  2B3K A;  1W7V A;  5E5B A;  2BWU A;  2GG3 A;  4U6C A;  4PNC A;  4U6Z A;  2Q96 A;  4U70 A;  3O5V A;  4A6V A;  4U76 A;  2G6P A;  1CHM A;  3L7G A;  5CDV A;  3L24 A;  2BN7 A;  2GGB A;  4FLL A;  3TB5 A;  3CB6 A;  2GZ5 A;  1KQ9 A;  2V6C A;  4IKR A;  4ZWP A;  5CDL A;  3MAT A;  3IU7 A;  4IKT A;  5JFR A;  1YW8 A;  2Q8K A;  1WL9 A;  4FLJ A;  1R5H A;  1C21 A;  1KQ0 A;  2GU6 A;  1QXY A;  1WL6 A;  4RGZ 1;  2GTX A;  3MR1 A;  4FUK A;  1YVM A;  2GGC A;  4U75 A;  2BWX A;  5CE6 A;  2BHC A;  3IU8 A;  3ROR A;  4FO8 A;  1YW7 A;  1C24 A;  3FM3 A;  2GA2 A;  2OAZ A;  4IKU A;  3BIQ A;  3CTZ A;  1QXW A;  3IU9 A;  1WN1 A;  4S2R P;  3CB5 A;  1BOA A;  1C22 A;  4IDY A;  4U71 A;  3PN9 A;  4ZWU A;  5CDE A;  1QXZ A;  4IPA A;  3TAV A;  2V3X A;  1W2M A;  2Q95 A;  5CIK A;  4S00 A;  2NQ6 A;  1KP0 A;  4S2T P;  3BIP A;  1M35 A;  3IL0 A;  3PKB A;  4IKS A;  1XNZ A;  2GG7 A;  2ADU A;  1O0X A;  4S01 A;  2BHA A;  3S6B A;  2DFI A;  4U1B A;  4EGE A;  4ZWO A;  4PV4 A;  3PKD A;  1A16 A;  4U69 A;  2EA4 A;  5FCH A;  4U73 A;  4U6W A;  1R58 A;  1YJ3 A;  4HXX A;  1B6A A;  4FKC A;  1WBQ A;  4FLK A;  1YW9 A;  2GG5 A;  3PEB A;  4KM3 A;  2GG8 A;  2OKN A;  4RZY A;  2P99 A;  3FMQ A;  1XGM A;  4IF7 A;  2BWW A;  1N51 A;  2EVM A;  4OOK A;  2BHB A;  2ZSG A;  3Q6D A;  2BB7 A;  1B59 A;  2BWT A;  1C23 A;  3PKA A;  3OOO A;  2GG2 A;  3MX6 A;  2B3H A;  2BHD A;  2NQ7 A;  1XGN A;  2EVC A;  5FCF A;  2P98 A;  1BN5 A;  4B28 A;  2MAT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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