3RVAA

Crystal structure of organophosphorus acid anhydrolase from alteromonas macleodii
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
445
structure length
444
Chain Sequence
SQHKATYQQHIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHKVPPEPNDFWTDSFDIKLLQQADAVEKFLPYDKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAASRQGDNDVPYTSIVALNEHASILHYMQDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKNENMTRDLDLNLEH
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Organophosphorus acid anhydrolase
publication title Organophosphorus acid anhydrolase from Alteromonas macleodii: structural study and functional relationship to prolidases.
pubmed doi rcsb
source organism Alteromonas macleodii
molecule tags Hydrolase
total genus 159
structure length 444
sequence length 445
ec nomenclature ec 3.1.8.2: Diisopropyl-fluorophosphatase.
pdb deposition date 2011-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3rvaA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3rvaA02
2V6CA 1C27A 2Q94A 3QOCA 4IKUA 1N51A 1MATA 4JUQA 4FUKA 3PKBA 5CE6A 1O0XA 3PKEA 3MR1A 2B3LA 1W7VA 3TB5A 2Q8KA 5CDLA 3IU9A 2NQ7A 3TAVA 3FMQA 2HOWA 4S2TP 1WLRA 4PV4A 4S2RP 4S00A 4A6WA 2GA2A 4HXXA 3OVKA 2MATA 1XNZA 1M35A 4U6WA 2OKNA 2EVMA 5JHUA 3S6BA 3BIPA 1KP0A 2Q95A 2GGCA 2BWSA 4U6CA 4U6ZA 4FLIA 1WY2A 3PKCA 3Q6DA 5CDEA 2Q93A 4ZNGA 2BHBA 2BWVA 1C24A 3MATA 2GU6A 2BHAA 5D6EA 1XGNA 2Q96A 2GG3A 4FO8A 5JFRA 3D27A 5JI6A 4IPAA 3CB6A 4U75A 4FLKA 5E2CA 3MX6A 5D6FA 2Q92A 3O5VA 2OAZA 3RVAA 3PKDA 3PKAA 3FMRA 3IG4A 4R60A 1YJ3A 2NQ6A 3CB5A 4IF7A 3FM3A 1YW9A 1QXWA 2BN7A 1R5HA 1XGMA 4B28A 2EVCA 5CLSA 3PN9A 2GG0A 4FLJA 3L24A 2V3YA 1A16A 4A6VA 3I7MA 5CDVA 2BHCA 2BWYA 3IU7A 5FCFA 3BITA 4U76A 3CTZA 2GU5A 2P98A 4KM3A 2BHDA 3L7GA 4ZWOA 1B6AA 1BN5A 2BH3A 2EA2A 2ZSGA 1KQ9A 4IKTA 2P99A 1C23A 5CNXA 4IU6A 1WL9A 4U73A 1XGOA 4IECA 2V3XA 4Z7MA 4ZWUA 1PV9A 4S01A 1Y1NA 1C22A 2EVOA 5FCHA 3OOOA 4FKCA 4EGEA 1B59A 4MATA 2GZ5A 4FO7A 4QR8A 1JAWA 2GTXA 4U6JA 2BWXA 1QXZA 3RORA 2GG8A 2BB7A 2GU7A 1WBQA 2GU4A 2GG7A 2DFIA 4PNCA 1BOAA 1XGSA 2BWWA 4U69A 4RZZA 4U70A 2B3HA 2B3KA 1KQ0A 1C21A 5CIKA 2V3ZA 4RZYA 2GG9A 4IKSA 1R5GA 2GG2A 2EA4A 1YW8A 4U1BA 2GG5A 2IW2A 1WL6A 5E5BA 3IU8A 4OOKA 2P9AA 4RGZ1 1WKMA 3PEBA 2GGBA 3IL0A 1QXYA 4U6EA 1YVMA 1WN1A 4ZWPA 4IDYA 4FLLA 1W2MA 3BIQA 1QZYA 2G6PA 2ADUA 4IKRA 2BWUA 4U71A 1CHMA 1YW7A 1R58A 2BWTA
chains in the Genus database with same CATH superfamily
2V6CA 1C27A 2Q94A 3QOCA 4IKUA 1N51A 1MATA 4JUQA 4FUKA 3PKBA 5CE6A 1O0XA 3PKEA 3MR1A 2B3LA 1W7VA 3TB5A 2Q8KA 5CDLA 3IU9A 2NQ7A 3TAVA 3FMQA 2HOWA 4S2TP 1WLRA 4PV4A 4S2RP 4S00A 4A6WA 2GA2A 4HXXA 3OVKA 2MATA 1XNZA 1M35A 4U6WA 2OKNA 2EVMA 5JHUA 3S6BA 3BIPA 1KP0A 2Q95A 2GGCA 2BWSA 4U6CA 4U6ZA 4FLIA 1WY2A 3PKCA 3Q6DA 5CDEA 2Q93A 4ZNGA 2BHBA 2BWVA 1C24A 3MATA 2GU6A 2BHAA 5D6EA 1XGNA 2Q96A 2GG3A 4FO8A 5JFRA 3D27A 5JI6A 4IPAA 3CB6A 4U75A 4FLKA 5E2CA 3MX6A 5D6FA 2Q92A 3O5VA 2OAZA 3RVAA 3PKDA 3PKAA 3FMRA 3IG4A 4R60A 1YJ3A 2NQ6A 3CB5A 4IF7A 3FM3A 1YW9A 1QXWA 2BN7A 1R5HA 1XGMA 4B28A 2EVCA 5CLSA 3PN9A 2GG0A 4FLJA 3L24A 2V3YA 1A16A 4A6VA 3I7MA 5CDVA 2BHCA 2BWYA 3IU7A 5FCFA 3BITA 4U76A 3CTZA 2GU5A 2P98A 4KM3A 2BHDA 3L7GA 4ZWOA 1B6AA 1BN5A 2BH3A 2EA2A 2ZSGA 1KQ9A 4IKTA 2P99A 1C23A 5CNXA 4IU6A 1WL9A 4U73A 1XGOA 4IECA 2V3XA 4Z7MA 4ZWUA 1PV9A 4S01A 1Y1NA 1C22A 2EVOA 5FCHA 3OOOA 4FKCA 4EGEA 1B59A 4MATA 2GZ5A 4FO7A 4QR8A 1JAWA 2GTXA 4U6JA 2BWXA 1QXZA 3RORA 2GG8A 2BB7A 2GU7A 1WBQA 2GU4A 2GG7A 2DFIA 4PNCA 1BOAA 1XGSA 2BWWA 4U69A 4RZZA 4U70A 2B3HA 2B3KA 1KQ0A 1C21A 5CIKA 2V3ZA 4RZYA 2GG9A 4IKSA 1R5GA 2GG2A 2EA4A 1YW8A 4U1BA 2GG5A 2IW2A 1WL6A 5E5BA 3IU8A 4OOKA 2P9AA 4RGZ1 1WKMA 3PEBA 2GGBA 3IL0A 1QXYA 4U6EA 1YVMA 1WN1A 4ZWPA 4IDYA 4FLLA 1W2MA 3BIQA 1QZYA 2G6PA 2ADUA 4IKRA 2BWUA 4U71A 1CHMA 1YW7A 1R58A 2BWTA
chains in the Genus database with same CATH topology
2V6CA 1C27A 2Q94A 3QOCA 4IKUA 1N51A 1MATA 4JUQA 4FUKA 3PKBA 5CE6A 1O0XA 3PKEA 3MR1A 2B3LA 1W7VA 3TB5A 2Q8KA 5CDLA 3IU9A 2NQ7A 3TAVA 3FMQA 2HOWA 4S2TP 1WLRA 4PV4A 4S2RP 4S00A 4A6WA 2GA2A 4HXXA 3OVKA 2MATA 1XNZA 1M35A 4U6WA 2OKNA 2EVMA 5JHUA 3S6BA 3BIPA 1KP0A 2Q95A 2GGCA 2BWSA 4U6CA 4U6ZA 4FLIA 1WY2A 3PKCA 3Q6DA 5CDEA 2Q93A 4ZNGA 2BHBA 2BWVA 1C24A 3MATA 2GU6A 2BHAA 5D6EA 1XGNA 2Q96A 2GG3A 4FO8A 5JFRA 3D27A 5JI6A 4IPAA 3CB6A 4U75A 4FLKA 5E2CA 3MX6A 5D6FA 2Q92A 3O5VA 2OAZA 3RVAA 3PKDA 3PKAA 3FMRA 3IG4A 4R60A 1YJ3A 2NQ6A 3CB5A 4IF7A 3FM3A 1YW9A 1QXWA 2BN7A 1R5HA 1XGMA 4B28A 2EVCA 5CLSA 3PN9A 2GG0A 4FLJA 3L24A 2V3YA 1A16A 4A6VA 3I7MA 5CDVA 2BHCA 2BWYA 3IU7A 5FCFA 3BITA 4U76A 3CTZA 2GU5A 2P98A 4KM3A 2BHDA 3L7GA 4ZWOA 1B6AA 1BN5A 2BH3A 2EA2A 2ZSGA 1KQ9A 4IKTA 2P99A 1C23A 5CNXA 4IU6A 1WL9A 4U73A 1XGOA 4IECA 2V3XA 4Z7MA 4ZWUA 1PV9A 4S01A 1Y1NA 1C22A 2EVOA 5FCHA 3OOOA 4FKCA 4EGEA 1B59A 4MATA 2GZ5A 4FO7A 4QR8A 1JAWA 2GTXA 4U6JA 2BWXA 1QXZA 3RORA 2GG8A 2BB7A 2GU7A 1WBQA 2GU4A 2GG7A 2DFIA 4PNCA 1BOAA 1XGSA 2BWWA 4U69A 4RZZA 4U70A 2B3HA 2B3KA 1KQ0A 1C21A 5CIKA 2V3ZA 4RZYA 2GG9A 4IKSA 1R5GA 2GG2A 2EA4A 1YW8A 4U1BA 2GG5A 2IW2A 1WL6A 5E5BA 3IU8A 4OOKA 2P9AA 4RGZ1 1WKMA 3PEBA 2GGBA 3IL0A 1QXYA 4U6EA 1YVMA 1WN1A 4ZWPA 4IDYA 4FLLA 1W2MA 3BIQA 1QZYA 2G6PA 2ADUA 4IKRA 2BWUA 4U71A 1CHMA 1YW7A 1R58A 2BWTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2V6C A;  1C27 A;  2Q94 A;  3QOC A;  4IKU A;  1N51 A;  1MAT A;  4JUQ A;  4FUK A;  3PKB A;  5CE6 A;  1O0X A;  3PKE A;  3MR1 A;  2B3L A;  1W7V A;  3TB5 A;  2Q8K A;  5CDL A;  3IU9 A;  2NQ7 A;  3TAV A;  3FMQ A;  2HOW A;  4S2T P;  1WLR A;  4PV4 A;  4S2R P;  4S00 A;  4A6W A;  2GA2 A;  4HXX A;  3OVK A;  2MAT A;  1XNZ A;  1M35 A;  4U6W A;  2OKN A;  2EVM A;  5JHU A;  3S6B A;  3BIP A;  1KP0 A;  2Q95 A;  2GGC A;  2BWS A;  4U6C A;  4U6Z A;  4FLI A;  1WY2 A;  3PKC A;  3Q6D A;  5CDE A;  2Q93 A;  4ZNG A;  2BHB A;  2BWV A;  1C24 A;  3MAT A;  2GU6 A;  2BHA A;  5D6E A;  1XGN A;  2Q96 A;  2GG3 A;  4FO8 A;  5JFR A;  3D27 A;  5JI6 A;  4IPA A;  3CB6 A;  4U75 A;  4FLK A;  5E2C A;  3MX6 A;  5D6F A;  2Q92 A;  3O5V A;  2OAZ A;  3RVA A;  3PKD A;  3PKA A;  3FMR A;  3IG4 A;  4R60 A;  1YJ3 A;  2NQ6 A;  3CB5 A;  4IF7 A;  3FM3 A;  1YW9 A;  1QXW A;  2BN7 A;  1R5H A;  1XGM A;  4B28 A;  2EVC A;  5CLS A;  3PN9 A;  2GG0 A;  4FLJ A;  3L24 A;  2V3Y A;  1A16 A;  4A6V A;  3I7M A;  5CDV A;  2BHC A;  2BWY A;  3IU7 A;  5FCF A;  3BIT A;  4U76 A;  3CTZ A;  2GU5 A;  2P98 A;  4KM3 A;  2BHD A;  3L7G A;  4ZWO A;  1B6A A;  1BN5 A;  2BH3 A;  2EA2 A;  2ZSG A;  1KQ9 A;  4IKT A;  2P99 A;  1C23 A;  5CNX A;  4IU6 A;  1WL9 A;  4U73 A;  1XGO A;  4IEC A;  2V3X A;  4Z7M A;  4ZWU A;  1PV9 A;  4S01 A;  1Y1N A;  1C22 A;  2EVO A;  5FCH A;  3OOO A;  4FKC A;  4EGE A;  1B59 A;  4MAT A;  2GZ5 A;  4FO7 A;  4QR8 A;  1JAW A;  2GTX A;  4U6J A;  2BWX A;  1QXZ A;  3ROR A;  2GG8 A;  2BB7 A;  2GU7 A;  1WBQ A;  2GU4 A;  2GG7 A;  2DFI A;  4PNC A;  1BOA A;  1XGS A;  2BWW A;  4U69 A;  4RZZ A;  4U70 A;  2B3H A;  2B3K A;  1KQ0 A;  1C21 A;  5CIK A;  2V3Z A;  4RZY A;  2GG9 A;  4IKS A;  1R5G A;  2GG2 A;  2EA4 A;  1YW8 A;  4U1B A;  2GG5 A;  2IW2 A;  1WL6 A;  5E5B A;  3IU8 A;  4OOK A;  2P9A A;  4RGZ 1;  1WKM A;  3PEB A;  2GGB A;  3IL0 A;  1QXY A;  4U6E A;  1YVM A;  1WN1 A;  4ZWP A;  4IDY A;  4FLL A;  1W2M A;  3BIQ A;  1QZY A;  2G6P A;  2ADU A;  4IKR A;  2BWU A;  4U71 A;  1CHM A;  1YW7 A;  1R58 A;  2BWT A; 
#chains in the Genus database with same CATH topology
 2V6C A;  1C27 A;  2Q94 A;  3QOC A;  4IKU A;  1N51 A;  1MAT A;  4JUQ A;  4FUK A;  3PKB A;  5CE6 A;  1O0X A;  3PKE A;  3MR1 A;  2B3L A;  1W7V A;  3TB5 A;  2Q8K A;  5CDL A;  3IU9 A;  2NQ7 A;  3TAV A;  3FMQ A;  2HOW A;  4S2T P;  1WLR A;  4PV4 A;  4S2R P;  4S00 A;  4A6W A;  2GA2 A;  4HXX A;  3OVK A;  2MAT A;  1XNZ A;  1M35 A;  4U6W A;  2OKN A;  2EVM A;  5JHU A;  3S6B A;  3BIP A;  1KP0 A;  2Q95 A;  2GGC A;  2BWS A;  4U6C A;  4U6Z A;  4FLI A;  1WY2 A;  3PKC A;  3Q6D A;  5CDE A;  2Q93 A;  4ZNG A;  2BHB A;  2BWV A;  1C24 A;  3MAT A;  2GU6 A;  2BHA A;  5D6E A;  1XGN A;  2Q96 A;  2GG3 A;  4FO8 A;  5JFR A;  3D27 A;  5JI6 A;  4IPA A;  3CB6 A;  4U75 A;  4FLK A;  5E2C A;  3MX6 A;  5D6F A;  2Q92 A;  3O5V A;  2OAZ A;  3RVA A;  3PKD A;  3PKA A;  3FMR A;  3IG4 A;  4R60 A;  1YJ3 A;  2NQ6 A;  3CB5 A;  4IF7 A;  3FM3 A;  1YW9 A;  1QXW A;  2BN7 A;  1R5H A;  1XGM A;  4B28 A;  2EVC A;  5CLS A;  3PN9 A;  2GG0 A;  4FLJ A;  3L24 A;  2V3Y A;  1A16 A;  4A6V A;  3I7M A;  5CDV A;  2BHC A;  2BWY A;  3IU7 A;  5FCF A;  3BIT A;  4U76 A;  3CTZ A;  2GU5 A;  2P98 A;  4KM3 A;  2BHD A;  3L7G A;  4ZWO A;  1B6A A;  1BN5 A;  2BH3 A;  2EA2 A;  2ZSG A;  1KQ9 A;  4IKT A;  2P99 A;  1C23 A;  5CNX A;  4IU6 A;  1WL9 A;  4U73 A;  1XGO A;  4IEC A;  2V3X A;  4Z7M A;  4ZWU A;  1PV9 A;  4S01 A;  1Y1N A;  1C22 A;  2EVO A;  5FCH A;  3OOO A;  4FKC A;  4EGE A;  1B59 A;  4MAT A;  2GZ5 A;  4FO7 A;  4QR8 A;  1JAW A;  2GTX A;  4U6J A;  2BWX A;  1QXZ A;  3ROR A;  2GG8 A;  2BB7 A;  2GU7 A;  1WBQ A;  2GU4 A;  2GG7 A;  2DFI A;  4PNC A;  1BOA A;  1XGS A;  2BWW A;  4U69 A;  4RZZ A;  4U70 A;  2B3H A;  2B3K A;  1KQ0 A;  1C21 A;  5CIK A;  2V3Z A;  4RZY A;  2GG9 A;  4IKS A;  1R5G A;  2GG2 A;  2EA4 A;  1YW8 A;  4U1B A;  2GG5 A;  2IW2 A;  1WL6 A;  5E5B A;  3IU8 A;  4OOK A;  2P9A A;  4RGZ 1;  1WKM A;  3PEB A;  2GGB A;  3IL0 A;  1QXY A;  4U6E A;  1YVM A;  1WN1 A;  4ZWP A;  4IDY A;  4FLL A;  1W2M A;  3BIQ A;  1QZY A;  2G6P A;  2ADU A;  4IKR A;  2BWU A;  4U71 A;  1CHM A;  1YW7 A;  1R58 A;  2BWT A; 
#chains in the Genus database with same CATH homology
 2V6C A;  1C27 A;  2Q94 A;  3QOC A;  4IKU A;  1N51 A;  1MAT A;  4JUQ A;  4FUK A;  3PKB A;  5CE6 A;  1O0X A;  3PKE A;  3MR1 A;  2B3L A;  1W7V A;  3TB5 A;  2Q8K A;  5CDL A;  3IU9 A;  2NQ7 A;  3TAV A;  3FMQ A;  2HOW A;  4S2T P;  1WLR A;  4PV4 A;  4S2R P;  4S00 A;  4A6W A;  2GA2 A;  4HXX A;  3OVK A;  2MAT A;  1XNZ A;  1M35 A;  4U6W A;  2OKN A;  2EVM A;  5JHU A;  3S6B A;  3BIP A;  1KP0 A;  2Q95 A;  2GGC A;  2BWS A;  4U6C A;  4U6Z A;  4FLI A;  1WY2 A;  3PKC A;  3Q6D A;  5CDE A;  2Q93 A;  4ZNG A;  2BHB A;  2BWV A;  1C24 A;  3MAT A;  2GU6 A;  2BHA A;  5D6E A;  1XGN A;  2Q96 A;  2GG3 A;  4FO8 A;  5JFR A;  3D27 A;  5JI6 A;  4IPA A;  3CB6 A;  4U75 A;  4FLK A;  5E2C A;  3MX6 A;  5D6F A;  2Q92 A;  3O5V A;  2OAZ A;  3RVA A;  3PKD A;  3PKA A;  3FMR A;  3IG4 A;  4R60 A;  1YJ3 A;  2NQ6 A;  3CB5 A;  4IF7 A;  3FM3 A;  1YW9 A;  1QXW A;  2BN7 A;  1R5H A;  1XGM A;  4B28 A;  2EVC A;  5CLS A;  3PN9 A;  2GG0 A;  4FLJ A;  3L24 A;  2V3Y A;  1A16 A;  4A6V A;  3I7M A;  5CDV A;  2BHC A;  2BWY A;  3IU7 A;  5FCF A;  3BIT A;  4U76 A;  3CTZ A;  2GU5 A;  2P98 A;  4KM3 A;  2BHD A;  3L7G A;  4ZWO A;  1B6A A;  1BN5 A;  2BH3 A;  2EA2 A;  2ZSG A;  1KQ9 A;  4IKT A;  2P99 A;  1C23 A;  5CNX A;  4IU6 A;  1WL9 A;  4U73 A;  1XGO A;  4IEC A;  2V3X A;  4Z7M A;  4ZWU A;  1PV9 A;  4S01 A;  1Y1N A;  1C22 A;  2EVO A;  5FCH A;  3OOO A;  4FKC A;  4EGE A;  1B59 A;  4MAT A;  2GZ5 A;  4FO7 A;  4QR8 A;  1JAW A;  2GTX A;  4U6J A;  2BWX A;  1QXZ A;  3ROR A;  2GG8 A;  2BB7 A;  2GU7 A;  1WBQ A;  2GU4 A;  2GG7 A;  2DFI A;  4PNC A;  1BOA A;  1XGS A;  2BWW A;  4U69 A;  4RZZ A;  4U70 A;  2B3H A;  2B3K A;  1KQ0 A;  1C21 A;  5CIK A;  2V3Z A;  4RZY A;  2GG9 A;  4IKS A;  1R5G A;  2GG2 A;  2EA4 A;  1YW8 A;  4U1B A;  2GG5 A;  2IW2 A;  1WL6 A;  5E5B A;  3IU8 A;  4OOK A;  2P9A A;  4RGZ 1;  1WKM A;  3PEB A;  2GGB A;  3IL0 A;  1QXY A;  4U6E A;  1YVM A;  1WN1 A;  4ZWP A;  4IDY A;  4FLL A;  1W2M A;  3BIQ A;  1QZY A;  2G6P A;  2ADU A;  4IKR A;  2BWU A;  4U71 A;  1CHM A;  1YW7 A;  1R58 A;  2BWT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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