3RVAA

Crystal structure of organophosphorus acid anhydrolase from alteromonas macleodii
Total Genus 159
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
159
sequence length
445
structure length
444
Chain Sequence
b'SQHKATYQQHIEELQARTREALQREGLDGLVIHSGQGKRLFLDDNHYPFKVNPQFKAWVPVIDNPNCWLVVNGVDKPTLIFYRPEDFWHKVPPEPNDFWTDSFDIKLLQQADAVEKFLPYDKSRFAYVGEYIEVAKALGFDNVNPDRVLHYLHYQRAYKTDYELDCMREANKLAVAGHKAAEQAFREGKSEFDINLAYAAASRQGDNDVPYTSIVALNEHASILHYMQDTVAPKESRSFLIDAGANYHGYAADITRTYAQEGVHNSAMFRDLIQAVDKVTLTLVDSLKPGVAYTDIHLLAHDGIAQILHDTGMVNLTPPEIVEMGITRTFFPHGIGHFLGLQVHDVGGLVNDDRGTPKPAPDDHPFLRCTRMVEARQVFTIEPGLYFIDSLLRDLKATPASKYINWDTIDAYKPFGGIRIEDNIIVHRDKNENMTRDLDLNLEH'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Organophosphorus acid anhydrolase
publication title Organophosphorus acid anhydrolase from Alteromonas macleodii: structural study and functional relationship to prolidases.
pubmed doi rcsb
source organism Alteromonas macleodii
molecule tags Hydrolase
total genus 159
structure length 444
sequence length 445
ec nomenclature ec 3.1.8.2: Diisopropyl-fluorophosphatase.
pdb deposition date 2011-05-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3rvaA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3rvaA02
5CIKA 5CNXA 1R5GA 4PNCA 3L24A 2ADUA 4FLJA 1W2MA 3PKBA 1Y1NA 2OAZA 2BWYA 2GG2A 3MATA 1QXYA 2MATA 4HXXA 2GG7A 5CE6A 4FLKA 2BHBA 4JUQA 4U6WA 2HOWA 2GG3A 4RZZA 2V6CA 4IKUA 5CLSA 1YJ3A 2B3HA 4FUKA 1R5HA 4ZWPA 4ZWUA 2Q8KA 2NQ7A 5JFRA 2BWXA 4IDYA 4FO8A 1R58A 4KM3A 4U69A 1C23A 2GGBA 4U6ZA 2Q92A 1PV9A 1BOAA 2V3ZA 2BWVA 1W7VA 5CDLA 3PKCA 4MATA 3PN9A 4A6VA 5E2CA 3CTZA 4ZWOA 3FMQA 3TAVA 2BWUA 1WLRA 1O0XA 4U71A 5CDEA 3BITA 3I7MA 1XGSA 2EVOA 1QXZA 2BB7A 4PV4A 4EGEA 3L7GA 4Z7MA 2ZSGA 4S2RP 2B3LA 1M35A 3IU7A 2P99A 2GA2A 1C22A 3PKAA 1KP0A 1XGOA 1WKMA 1WL9A 3PKEA 1WY2A 2GU5A 4S01A 4OOKA 2EA4A 4FLLA 3TB5A 2P9AA 2BWSA 4FLIA 3IL0A 4U75A 5D6EA 3PEBA 3FMRA 1XGMA 5E5BA 2EVCA 4U76A 4B28A 1YW9A 4IF7A 2EVMA 3OVKA 2GU6A 4U6CA 3CB5A 1QZYA 3D27A 4FO7A 1C27A 2IW2A 2BHAA 2OKNA 1KQ0A 2DFIA 4U73A 2Q94A 2Q96A 1YW7A 1C24A 3RVAA 2GU4A 2GU7A 4FKCA 4U70A 2GG9A 2GGCA 2BN7A 3FM3A 3IU9A 2G6PA 4U6EA 2Q95A 1XGNA 1C21A 1A16A 4U1BA 2GZ5A 1WN1A 2BWWA 1KQ9A 3MR1A 5JHUA 1BN5A 3MX6A 1WBQA 2V3XA 4A6WA 4RZYA 4U6JA 1YW8A 2BHDA 4RGZ1 2BHCA 1B59A 2GG0A 5FCFA 2BWTA 3BIQA 4IU6A 2P98A 2NQ6A 2V3YA 1N51A 1QXWA 1WL6A 2B3KA 4IKTA 1B6AA 3O5VA 4S2TP 5D6FA 5JI6A 4IKSA 2BH3A 1MATA 3BIPA 2GG5A 3CB6A 2GTXA 1XNZA 1JAWA 3IG4A 3IU8A 5CDVA 4IPAA 3RORA 4QR8A 2Q93A 3PKDA 4IECA 3OOOA 4ZNGA 2EA2A 4IKRA 4R60A 3Q6DA 1YVMA 3QOCA 2GG8A 3S6BA 5FCHA 1CHMA 4S00A
chains in the Genus database with same CATH superfamily
5CIKA 5CNXA 1R5GA 4PNCA 3L24A 2ADUA 4FLJA 1W2MA 3PKBA 1Y1NA 2OAZA 2BWYA 2GG2A 3MATA 1QXYA 2MATA 4HXXA 2GG7A 5CE6A 4FLKA 2BHBA 4JUQA 4U6WA 2HOWA 2GG3A 4RZZA 2V6CA 4IKUA 5CLSA 1YJ3A 2B3HA 4FUKA 1R5HA 4ZWPA 4ZWUA 2Q8KA 2NQ7A 5JFRA 2BWXA 4IDYA 4FO8A 1R58A 4KM3A 4U69A 1C23A 2GGBA 4U6ZA 2Q92A 1PV9A 1BOAA 2V3ZA 2BWVA 1W7VA 5CDLA 3PKCA 4MATA 3PN9A 4A6VA 5E2CA 3CTZA 4ZWOA 3FMQA 3TAVA 2BWUA 1WLRA 1O0XA 4U71A 5CDEA 3BITA 3I7MA 1XGSA 2EVOA 1QXZA 2BB7A 4PV4A 4EGEA 3L7GA 4Z7MA 2ZSGA 4S2RP 2B3LA 1M35A 3IU7A 2P99A 2GA2A 1C22A 3PKAA 1KP0A 1XGOA 1WKMA 1WL9A 3PKEA 1WY2A 2GU5A 4S01A 4OOKA 2EA4A 4FLLA 3TB5A 2P9AA 2BWSA 4FLIA 3IL0A 4U75A 5D6EA 3PEBA 3FMRA 1XGMA 5E5BA 2EVCA 4U76A 4B28A 1YW9A 4IF7A 2EVMA 3OVKA 2GU6A 4U6CA 3CB5A 1QZYA 3D27A 4FO7A 1C27A 2IW2A 2BHAA 2OKNA 1KQ0A 2DFIA 4U73A 2Q94A 2Q96A 1YW7A 1C24A 3RVAA 2GU4A 2GU7A 4FKCA 4U70A 2GG9A 2GGCA 2BN7A 3FM3A 3IU9A 2G6PA 4U6EA 2Q95A 1XGNA 1C21A 1A16A 4U1BA 2GZ5A 1WN1A 2BWWA 1KQ9A 3MR1A 5JHUA 1BN5A 3MX6A 1WBQA 2V3XA 4A6WA 4RZYA 4U6JA 1YW8A 2BHDA 4RGZ1 2BHCA 1B59A 2GG0A 5FCFA 2BWTA 3BIQA 4IU6A 2P98A 2NQ6A 2V3YA 1N51A 1QXWA 1WL6A 2B3KA 4IKTA 1B6AA 3O5VA 4S2TP 5D6FA 5JI6A 4IKSA 2BH3A 1MATA 3BIPA 2GG5A 3CB6A 2GTXA 1XNZA 1JAWA 3IG4A 3IU8A 5CDVA 4IPAA 3RORA 4QR8A 2Q93A 3PKDA 4IECA 3OOOA 4ZNGA 2EA2A 4IKRA 4R60A 3Q6DA 1YVMA 3QOCA 2GG8A 3S6BA 5FCHA 1CHMA 4S00A
chains in the Genus database with same CATH topology
5CIKA 5CNXA 1R5GA 4PNCA 3L24A 2ADUA 4FLJA 1W2MA 3PKBA 1Y1NA 2OAZA 2BWYA 2GG2A 3MATA 1QXYA 2MATA 4HXXA 2GG7A 5CE6A 4FLKA 2BHBA 4JUQA 4U6WA 2HOWA 2GG3A 4RZZA 2V6CA 4IKUA 5CLSA 1YJ3A 2B3HA 4FUKA 1R5HA 4ZWPA 4ZWUA 2Q8KA 2NQ7A 5JFRA 2BWXA 4IDYA 4FO8A 1R58A 4KM3A 4U69A 1C23A 2GGBA 4U6ZA 2Q92A 1PV9A 1BOAA 2V3ZA 2BWVA 1W7VA 5CDLA 3PKCA 4MATA 3PN9A 4A6VA 5E2CA 3CTZA 4ZWOA 3FMQA 3TAVA 2BWUA 1WLRA 1O0XA 4U71A 5CDEA 3BITA 3I7MA 1XGSA 2EVOA 1QXZA 2BB7A 4PV4A 4EGEA 3L7GA 4Z7MA 2ZSGA 4S2RP 2B3LA 1M35A 3IU7A 2P99A 2GA2A 1C22A 3PKAA 1KP0A 1XGOA 1WKMA 1WL9A 3PKEA 1WY2A 2GU5A 4S01A 4OOKA 2EA4A 4FLLA 3TB5A 2P9AA 2BWSA 4FLIA 3IL0A 4U75A 5D6EA 3PEBA 3FMRA 1XGMA 5E5BA 2EVCA 4U76A 4B28A 1YW9A 4IF7A 2EVMA 3OVKA 2GU6A 4U6CA 3CB5A 1QZYA 3D27A 4FO7A 1C27A 2IW2A 2BHAA 2OKNA 1KQ0A 2DFIA 4U73A 2Q94A 2Q96A 1YW7A 1C24A 3RVAA 2GU4A 2GU7A 4FKCA 4U70A 2GG9A 2GGCA 2BN7A 3FM3A 3IU9A 2G6PA 4U6EA 2Q95A 1XGNA 1C21A 1A16A 4U1BA 2GZ5A 1WN1A 2BWWA 1KQ9A 3MR1A 5JHUA 1BN5A 3MX6A 1WBQA 2V3XA 4A6WA 4RZYA 4U6JA 1YW8A 2BHDA 4RGZ1 2BHCA 1B59A 2GG0A 5FCFA 2BWTA 3BIQA 4IU6A 2P98A 2NQ6A 2V3YA 1N51A 1QXWA 1WL6A 2B3KA 4IKTA 1B6AA 3O5VA 4S2TP 5D6FA 5JI6A 4IKSA 2BH3A 1MATA 3BIPA 2GG5A 3CB6A 2GTXA 1XNZA 1JAWA 3IG4A 3IU8A 5CDVA 4IPAA 3RORA 4QR8A 2Q93A 3PKDA 4IECA 3OOOA 4ZNGA 2EA2A 4IKRA 4R60A 3Q6DA 1YVMA 3QOCA 2GG8A 3S6BA 5FCHA 1CHMA 4S00A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5CIK A;  5CNX A;  1R5G A;  4PNC A;  3L24 A;  2ADU A;  4FLJ A;  1W2M A;  3PKB A;  1Y1N A;  2OAZ A;  2BWY A;  2GG2 A;  3MAT A;  1QXY A;  2MAT A;  4HXX A;  2GG7 A;  5CE6 A;  4FLK A;  2BHB A;  4JUQ A;  4U6W A;  2HOW A;  2GG3 A;  4RZZ A;  2V6C A;  4IKU A;  5CLS A;  1YJ3 A;  2B3H A;  4FUK A;  1R5H A;  4ZWP A;  4ZWU A;  2Q8K A;  2NQ7 A;  5JFR A;  2BWX A;  4IDY A;  4FO8 A;  1R58 A;  4KM3 A;  4U69 A;  1C23 A;  2GGB A;  4U6Z A;  2Q92 A;  1PV9 A;  1BOA A;  2V3Z A;  2BWV A;  1W7V A;  5CDL A;  3PKC A;  4MAT A;  3PN9 A;  4A6V A;  5E2C A;  3CTZ A;  4ZWO A;  3FMQ A;  3TAV A;  2BWU A;  1WLR A;  1O0X A;  4U71 A;  5CDE A;  3BIT A;  3I7M A;  1XGS A;  2EVO A;  1QXZ A;  2BB7 A;  4PV4 A;  4EGE A;  3L7G A;  4Z7M A;  2ZSG A;  4S2R P;  2B3L A;  1M35 A;  3IU7 A;  2P99 A;  2GA2 A;  1C22 A;  3PKA A;  1KP0 A;  1XGO A;  1WKM A;  1WL9 A;  3PKE A;  1WY2 A;  2GU5 A;  4S01 A;  4OOK A;  2EA4 A;  4FLL A;  3TB5 A;  2P9A A;  2BWS A;  4FLI A;  3IL0 A;  4U75 A;  5D6E A;  3PEB A;  3FMR A;  1XGM A;  5E5B A;  2EVC A;  4U76 A;  4B28 A;  1YW9 A;  4IF7 A;  2EVM A;  3OVK A;  2GU6 A;  4U6C A;  3CB5 A;  1QZY A;  3D27 A;  4FO7 A;  1C27 A;  2IW2 A;  2BHA A;  2OKN A;  1KQ0 A;  2DFI A;  4U73 A;  2Q94 A;  2Q96 A;  1YW7 A;  1C24 A;  3RVA A;  2GU4 A;  2GU7 A;  4FKC A;  4U70 A;  2GG9 A;  2GGC A;  2BN7 A;  3FM3 A;  3IU9 A;  2G6P A;  4U6E A;  2Q95 A;  1XGN A;  1C21 A;  1A16 A;  4U1B A;  2GZ5 A;  1WN1 A;  2BWW A;  1KQ9 A;  3MR1 A;  5JHU A;  1BN5 A;  3MX6 A;  1WBQ A;  2V3X A;  4A6W A;  4RZY A;  4U6J A;  1YW8 A;  2BHD A;  4RGZ 1;  2BHC A;  1B59 A;  2GG0 A;  5FCF A;  2BWT A;  3BIQ A;  4IU6 A;  2P98 A;  2NQ6 A;  2V3Y A;  1N51 A;  1QXW A;  1WL6 A;  2B3K A;  4IKT A;  1B6A A;  3O5V A;  4S2T P;  5D6F A;  5JI6 A;  4IKS A;  2BH3 A;  1MAT A;  3BIP A;  2GG5 A;  3CB6 A;  2GTX A;  1XNZ A;  1JAW A;  3IG4 A;  3IU8 A;  5CDV A;  4IPA A;  3ROR A;  4QR8 A;  2Q93 A;  3PKD A;  4IEC A;  3OOO A;  4ZNG A;  2EA2 A;  4IKR A;  4R60 A;  3Q6D A;  1YVM A;  3QOC A;  2GG8 A;  3S6B A;  5FCH A;  1CHM A;  4S00 A; 
#chains in the Genus database with same CATH topology
 5CIK A;  5CNX A;  1R5G A;  4PNC A;  3L24 A;  2ADU A;  4FLJ A;  1W2M A;  3PKB A;  1Y1N A;  2OAZ A;  2BWY A;  2GG2 A;  3MAT A;  1QXY A;  2MAT A;  4HXX A;  2GG7 A;  5CE6 A;  4FLK A;  2BHB A;  4JUQ A;  4U6W A;  2HOW A;  2GG3 A;  4RZZ A;  2V6C A;  4IKU A;  5CLS A;  1YJ3 A;  2B3H A;  4FUK A;  1R5H A;  4ZWP A;  4ZWU A;  2Q8K A;  2NQ7 A;  5JFR A;  2BWX A;  4IDY A;  4FO8 A;  1R58 A;  4KM3 A;  4U69 A;  1C23 A;  2GGB A;  4U6Z A;  2Q92 A;  1PV9 A;  1BOA A;  2V3Z A;  2BWV A;  1W7V A;  5CDL A;  3PKC A;  4MAT A;  3PN9 A;  4A6V A;  5E2C A;  3CTZ A;  4ZWO A;  3FMQ A;  3TAV A;  2BWU A;  1WLR A;  1O0X A;  4U71 A;  5CDE A;  3BIT A;  3I7M A;  1XGS A;  2EVO A;  1QXZ A;  2BB7 A;  4PV4 A;  4EGE A;  3L7G A;  4Z7M A;  2ZSG A;  4S2R P;  2B3L A;  1M35 A;  3IU7 A;  2P99 A;  2GA2 A;  1C22 A;  3PKA A;  1KP0 A;  1XGO A;  1WKM A;  1WL9 A;  3PKE A;  1WY2 A;  2GU5 A;  4S01 A;  4OOK A;  2EA4 A;  4FLL A;  3TB5 A;  2P9A A;  2BWS A;  4FLI A;  3IL0 A;  4U75 A;  5D6E A;  3PEB A;  3FMR A;  1XGM A;  5E5B A;  2EVC A;  4U76 A;  4B28 A;  1YW9 A;  4IF7 A;  2EVM A;  3OVK A;  2GU6 A;  4U6C A;  3CB5 A;  1QZY A;  3D27 A;  4FO7 A;  1C27 A;  2IW2 A;  2BHA A;  2OKN A;  1KQ0 A;  2DFI A;  4U73 A;  2Q94 A;  2Q96 A;  1YW7 A;  1C24 A;  3RVA A;  2GU4 A;  2GU7 A;  4FKC A;  4U70 A;  2GG9 A;  2GGC A;  2BN7 A;  3FM3 A;  3IU9 A;  2G6P A;  4U6E A;  2Q95 A;  1XGN A;  1C21 A;  1A16 A;  4U1B A;  2GZ5 A;  1WN1 A;  2BWW A;  1KQ9 A;  3MR1 A;  5JHU A;  1BN5 A;  3MX6 A;  1WBQ A;  2V3X A;  4A6W A;  4RZY A;  4U6J A;  1YW8 A;  2BHD A;  4RGZ 1;  2BHC A;  1B59 A;  2GG0 A;  5FCF A;  2BWT A;  3BIQ A;  4IU6 A;  2P98 A;  2NQ6 A;  2V3Y A;  1N51 A;  1QXW A;  1WL6 A;  2B3K A;  4IKT A;  1B6A A;  3O5V A;  4S2T P;  5D6F A;  5JI6 A;  4IKS A;  2BH3 A;  1MAT A;  3BIP A;  2GG5 A;  3CB6 A;  2GTX A;  1XNZ A;  1JAW A;  3IG4 A;  3IU8 A;  5CDV A;  4IPA A;  3ROR A;  4QR8 A;  2Q93 A;  3PKD A;  4IEC A;  3OOO A;  4ZNG A;  2EA2 A;  4IKR A;  4R60 A;  3Q6D A;  1YVM A;  3QOC A;  2GG8 A;  3S6B A;  5FCH A;  1CHM A;  4S00 A; 
#chains in the Genus database with same CATH homology
 5CIK A;  5CNX A;  1R5G A;  4PNC A;  3L24 A;  2ADU A;  4FLJ A;  1W2M A;  3PKB A;  1Y1N A;  2OAZ A;  2BWY A;  2GG2 A;  3MAT A;  1QXY A;  2MAT A;  4HXX A;  2GG7 A;  5CE6 A;  4FLK A;  2BHB A;  4JUQ A;  4U6W A;  2HOW A;  2GG3 A;  4RZZ A;  2V6C A;  4IKU A;  5CLS A;  1YJ3 A;  2B3H A;  4FUK A;  1R5H A;  4ZWP A;  4ZWU A;  2Q8K A;  2NQ7 A;  5JFR A;  2BWX A;  4IDY A;  4FO8 A;  1R58 A;  4KM3 A;  4U69 A;  1C23 A;  2GGB A;  4U6Z A;  2Q92 A;  1PV9 A;  1BOA A;  2V3Z A;  2BWV A;  1W7V A;  5CDL A;  3PKC A;  4MAT A;  3PN9 A;  4A6V A;  5E2C A;  3CTZ A;  4ZWO A;  3FMQ A;  3TAV A;  2BWU A;  1WLR A;  1O0X A;  4U71 A;  5CDE A;  3BIT A;  3I7M A;  1XGS A;  2EVO A;  1QXZ A;  2BB7 A;  4PV4 A;  4EGE A;  3L7G A;  4Z7M A;  2ZSG A;  4S2R P;  2B3L A;  1M35 A;  3IU7 A;  2P99 A;  2GA2 A;  1C22 A;  3PKA A;  1KP0 A;  1XGO A;  1WKM A;  1WL9 A;  3PKE A;  1WY2 A;  2GU5 A;  4S01 A;  4OOK A;  2EA4 A;  4FLL A;  3TB5 A;  2P9A A;  2BWS A;  4FLI A;  3IL0 A;  4U75 A;  5D6E A;  3PEB A;  3FMR A;  1XGM A;  5E5B A;  2EVC A;  4U76 A;  4B28 A;  1YW9 A;  4IF7 A;  2EVM A;  3OVK A;  2GU6 A;  4U6C A;  3CB5 A;  1QZY A;  3D27 A;  4FO7 A;  1C27 A;  2IW2 A;  2BHA A;  2OKN A;  1KQ0 A;  2DFI A;  4U73 A;  2Q94 A;  2Q96 A;  1YW7 A;  1C24 A;  3RVA A;  2GU4 A;  2GU7 A;  4FKC A;  4U70 A;  2GG9 A;  2GGC A;  2BN7 A;  3FM3 A;  3IU9 A;  2G6P A;  4U6E A;  2Q95 A;  1XGN A;  1C21 A;  1A16 A;  4U1B A;  2GZ5 A;  1WN1 A;  2BWW A;  1KQ9 A;  3MR1 A;  5JHU A;  1BN5 A;  3MX6 A;  1WBQ A;  2V3X A;  4A6W A;  4RZY A;  4U6J A;  1YW8 A;  2BHD A;  4RGZ 1;  2BHC A;  1B59 A;  2GG0 A;  5FCF A;  2BWT A;  3BIQ A;  4IU6 A;  2P98 A;  2NQ6 A;  2V3Y A;  1N51 A;  1QXW A;  1WL6 A;  2B3K A;  4IKT A;  1B6A A;  3O5V A;  4S2T P;  5D6F A;  5JI6 A;  4IKS A;  2BH3 A;  1MAT A;  3BIP A;  2GG5 A;  3CB6 A;  2GTX A;  1XNZ A;  1JAW A;  3IG4 A;  3IU8 A;  5CDV A;  4IPA A;  3ROR A;  4QR8 A;  2Q93 A;  3PKD A;  4IEC A;  3OOO A;  4ZNG A;  2EA2 A;  4IKR A;  4R60 A;  3Q6D A;  1YVM A;  3QOC A;  2GG8 A;  3S6B A;  5FCH A;  1CHM A;  4S00 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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