5CE6A

N-terminal domain of fact complex subunit spt16 from cicer arietinum (chickpea)
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
435
structure length
426
Chain Sequence
SIDLNTFQTRLKAFYSHWDDRRTDLWGSSDAIAVACPPPSRYLKSTALFLWLLGFEFPETIMVFTKKQIHVLCSQKKASILESVKKPARESVGVEIILHVKPKNDDGASSMDAIIRAIRAQSSSTVGHIAREEPEGRLLDLWAEKLKNSKFRLSDVANGFSALFAAKSNEEITYIKRAAYLTGSVMKNFVVTKLENVIDEEKKILHSTLMEETEKVILDPAKVNCKLKADNVDICYPPIFQSGGKFDLRPSAVSNDEALYYDSASVIICAVGARYKSYCSNIARTFLIDADPIQSKAYEVLLKAQEAVIGSLKPGNKLSAAYLAAVSVVEKDAPDMVSCLTKSAGTGIGIEFRESGLNINAKNDQIVKEGMVFNVSLGFQNLHCENSKSKNKVFSLLLADTIIINKDKTDVVTSIGSKALKDVAYS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transcription
molecule keywords FACT-Spt16
publication title Crystal structure and dynamics of Spt16N-domain of FACT complex from Cicer arietinum.
pubmed doi rcsb
source organism Cicer arietinum
total genus 149
structure length 426
sequence length 435
ec nomenclature
pdb deposition date 2015-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF14826 FACT-Spt16_Nlob FACT complex subunit SPT16 N-terminal lobe domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 5ce6A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 5ce6A02
3PKEA 1JAWA 4PNCA 1WLRA 2GU5A 3CB5A 5CE6A 2G6PA 4FUKA 1YJ3A 5E5BA 2GA2A 4FLKA 4JUQA 1BOAA 1C21A 4FLJA 2ZSGA 2GG7A 5FCFA 1XGMA 1N51A 1XGSA 2DFIA 1W7VA 3PN9A 1KP0A 2BWXA 2NQ7A 4B28A 3QOCA 2GU4A 1C24A 2BWUA 4U6WA 1XGOA 3I7MA 4KM3A 1W2MA 1R5GA 4U6ZA 5D6FA 4FKCA 1C22A 2V3ZA 4U69A 4PV4A 2NQ6A 4S01A 1YVMA 3FMQA 4EGEA 5CDEA 4IF7A 2GG3A 5E2CA 4ZWOA 2IW2A 3RORA 3Q6DA 4FO7A 2GU7A 1O0XA 5JFRA 2V3YA 2GG2A 1B6AA 2GZ5A 4IKUA 1QXWA 2B3LA 2BWYA 3MATA 1MATA 4U71A 2BWTA 4ZWPA 4IKTA 3MR1A 2GGCA 5CLSA 1WL9A 1CHMA 3BIPA 2GGBA 3BIQA 4U6CA 3RVAA 2OKNA 2BB7A 1PV9A 1BN5A 4IPAA 2Q8KA 4U76A 2BHAA 4ZWUA 1R5HA 2BWSA 2B3HA 4U73A 1B59A 4A6WA 4HXXA 2GTXA 4RZZA 1C23A 1XNZA 2BN7A 2BWVA 2V3XA 1WL6A 3L7GA 3PKBA 5CDVA 2P98A 4S2RP 1WY2A 4S2TP 4FO8A 4R60A 2EA4A 5CDLA 4IKSA 2GU6A 1QXZA 1WBQA 2Q93A 2P99A 3D27A 3FMRA 4U75A 3PEBA 3TAVA 4U70A 1XGNA 2B3KA 1YW8A 3CTZA 4FLLA 2EVOA 5FCHA 1QXYA 3CB6A 2EVCA 2EA2A 2GG9A 3OOOA 1KQ9A 5D6EA 1WKMA 3L24A 3O5VA 2MATA 4S00A 3TB5A 1R58A 1WN1A 3IU7A 4Z7MA 2ADUA 3IU8A 4MATA 3FM3A 2Q94A 4ZNGA 4IDYA 2BH3A 1M35A 3PKAA 1QZYA 2OAZA 3OVKA 1A16A 2Q96A 4IU6A 3PKDA 4U6JA 4IKRA 4OOKA 2Q95A 1C27A 2GG8A 4IECA 5JI6A 2HOWA 4QR8A 1YW9A 4U6EA 5JHUA 2GG0A 2BHDA 5CNXA 2BHCA 2Q92A 4FLIA 4A6VA 4U1BA 1Y1NA 2BWWA 3IU9A 3IL0A 3MX6A 3BITA 2BHBA 5CIKA 2P9AA 2GG5A 4RZYA 3PKCA 3S6BA 4RGZ1 1KQ0A 2EVMA 2V6CA 1YW7A 3IG4A
chains in the Genus database with same CATH superfamily
3PKEA 1JAWA 4PNCA 1WLRA 2GU5A 3CB5A 5CE6A 2G6PA 4FUKA 1YJ3A 5E5BA 2GA2A 4FLKA 4JUQA 1BOAA 1C21A 4FLJA 2ZSGA 2GG7A 5FCFA 1XGMA 1N51A 1XGSA 2DFIA 1W7VA 3PN9A 1KP0A 2BWXA 2NQ7A 4B28A 3QOCA 2GU4A 1C24A 2BWUA 4U6WA 1XGOA 3I7MA 4KM3A 1W2MA 1R5GA 4U6ZA 5D6FA 4FKCA 1C22A 2V3ZA 4U69A 4PV4A 2NQ6A 4S01A 1YVMA 3FMQA 4EGEA 5CDEA 4IF7A 2GG3A 5E2CA 4ZWOA 2IW2A 3RORA 3Q6DA 4FO7A 2GU7A 1O0XA 5JFRA 2V3YA 2GG2A 1B6AA 2GZ5A 4IKUA 1QXWA 2B3LA 2BWYA 3MATA 1MATA 4U71A 2BWTA 4ZWPA 4IKTA 3MR1A 2GGCA 5CLSA 1WL9A 1CHMA 3BIPA 2GGBA 3BIQA 4U6CA 3RVAA 2OKNA 2BB7A 1PV9A 1BN5A 4IPAA 2Q8KA 4U76A 2BHAA 4ZWUA 1R5HA 2BWSA 2B3HA 4U73A 1B59A 4A6WA 4HXXA 2GTXA 4RZZA 1C23A 1XNZA 2BN7A 2BWVA 2V3XA 1WL6A 3L7GA 3PKBA 5CDVA 2P98A 4S2RP 1WY2A 4S2TP 4FO8A 4R60A 2EA4A 5CDLA 4IKSA 2GU6A 1QXZA 1WBQA 2Q93A 2P99A 3D27A 3FMRA 4U75A 3PEBA 3TAVA 4U70A 1XGNA 2B3KA 1YW8A 3CTZA 4FLLA 2EVOA 5FCHA 1QXYA 3CB6A 2EVCA 2EA2A 2GG9A 3OOOA 1KQ9A 5D6EA 1WKMA 3L24A 3O5VA 2MATA 4S00A 3TB5A 1R58A 1WN1A 3IU7A 4Z7MA 2ADUA 3IU8A 4MATA 3FM3A 2Q94A 4ZNGA 4IDYA 2BH3A 1M35A 3PKAA 1QZYA 2OAZA 3OVKA 1A16A 2Q96A 4IU6A 3PKDA 4U6JA 4IKRA 4OOKA 2Q95A 1C27A 2GG8A 4IECA 5JI6A 2HOWA 4QR8A 1YW9A 4U6EA 5JHUA 2GG0A 2BHDA 5CNXA 2BHCA 2Q92A 4FLIA 4A6VA 4U1BA 1Y1NA 2BWWA 3IU9A 3IL0A 3MX6A 3BITA 2BHBA 5CIKA 2P9AA 2GG5A 4RZYA 3PKCA 3S6BA 4RGZ1 1KQ0A 2EVMA 2V6CA 1YW7A 3IG4A
chains in the Genus database with same CATH topology
3PKEA 1JAWA 4PNCA 1WLRA 2GU5A 3CB5A 5CE6A 2G6PA 4FUKA 1YJ3A 5E5BA 2GA2A 4FLKA 4JUQA 1BOAA 1C21A 4FLJA 2ZSGA 2GG7A 5FCFA 1XGMA 1N51A 1XGSA 2DFIA 1W7VA 3PN9A 1KP0A 2BWXA 2NQ7A 4B28A 3QOCA 2GU4A 1C24A 2BWUA 4U6WA 1XGOA 3I7MA 4KM3A 1W2MA 1R5GA 4U6ZA 5D6FA 4FKCA 1C22A 2V3ZA 4U69A 4PV4A 2NQ6A 4S01A 1YVMA 3FMQA 4EGEA 5CDEA 4IF7A 2GG3A 5E2CA 4ZWOA 2IW2A 3RORA 3Q6DA 4FO7A 2GU7A 1O0XA 5JFRA 2V3YA 2GG2A 1B6AA 2GZ5A 4IKUA 1QXWA 2B3LA 2BWYA 3MATA 1MATA 4U71A 2BWTA 4ZWPA 4IKTA 3MR1A 2GGCA 5CLSA 1WL9A 1CHMA 3BIPA 2GGBA 3BIQA 4U6CA 3RVAA 2OKNA 2BB7A 1PV9A 1BN5A 4IPAA 2Q8KA 4U76A 2BHAA 4ZWUA 1R5HA 2BWSA 2B3HA 4U73A 1B59A 4A6WA 4HXXA 2GTXA 4RZZA 1C23A 1XNZA 2BN7A 2BWVA 2V3XA 1WL6A 3L7GA 3PKBA 5CDVA 2P98A 4S2RP 1WY2A 4S2TP 4FO8A 4R60A 2EA4A 5CDLA 4IKSA 2GU6A 1QXZA 1WBQA 2Q93A 2P99A 3D27A 3FMRA 4U75A 3PEBA 3TAVA 4U70A 1XGNA 2B3KA 1YW8A 3CTZA 4FLLA 2EVOA 5FCHA 1QXYA 3CB6A 2EVCA 2EA2A 2GG9A 3OOOA 1KQ9A 5D6EA 1WKMA 3L24A 3O5VA 2MATA 4S00A 3TB5A 1R58A 1WN1A 3IU7A 4Z7MA 2ADUA 3IU8A 4MATA 3FM3A 2Q94A 4ZNGA 4IDYA 2BH3A 1M35A 3PKAA 1QZYA 2OAZA 3OVKA 1A16A 2Q96A 4IU6A 3PKDA 4U6JA 4IKRA 4OOKA 2Q95A 1C27A 2GG8A 4IECA 5JI6A 2HOWA 4QR8A 1YW9A 4U6EA 5JHUA 2GG0A 2BHDA 5CNXA 2BHCA 2Q92A 4FLIA 4A6VA 4U1BA 1Y1NA 2BWWA 3IU9A 3IL0A 3MX6A 3BITA 2BHBA 5CIKA 2P9AA 2GG5A 4RZYA 3PKCA 3S6BA 4RGZ1 1KQ0A 2EVMA 2V6CA 1YW7A 3IG4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3PKE A;  1JAW A;  4PNC A;  1WLR A;  2GU5 A;  3CB5 A;  5CE6 A;  2G6P A;  4FUK A;  1YJ3 A;  5E5B A;  2GA2 A;  4FLK A;  4JUQ A;  1BOA A;  1C21 A;  4FLJ A;  2ZSG A;  2GG7 A;  5FCF A;  1XGM A;  1N51 A;  1XGS A;  2DFI A;  1W7V A;  3PN9 A;  1KP0 A;  2BWX A;  2NQ7 A;  4B28 A;  3QOC A;  2GU4 A;  1C24 A;  2BWU A;  4U6W A;  1XGO A;  3I7M A;  4KM3 A;  1W2M A;  1R5G A;  4U6Z A;  5D6F A;  4FKC A;  1C22 A;  2V3Z A;  4U69 A;  4PV4 A;  2NQ6 A;  4S01 A;  1YVM A;  3FMQ A;  4EGE A;  5CDE A;  4IF7 A;  2GG3 A;  5E2C A;  4ZWO A;  2IW2 A;  3ROR A;  3Q6D A;  4FO7 A;  2GU7 A;  1O0X A;  5JFR A;  2V3Y A;  2GG2 A;  1B6A A;  2GZ5 A;  4IKU A;  1QXW A;  2B3L A;  2BWY A;  3MAT A;  1MAT A;  4U71 A;  2BWT A;  4ZWP A;  4IKT A;  3MR1 A;  2GGC A;  5CLS A;  1WL9 A;  1CHM A;  3BIP A;  2GGB A;  3BIQ A;  4U6C A;  3RVA A;  2OKN A;  2BB7 A;  1PV9 A;  1BN5 A;  4IPA A;  2Q8K A;  4U76 A;  2BHA A;  4ZWU A;  1R5H A;  2BWS A;  2B3H A;  4U73 A;  1B59 A;  4A6W A;  4HXX A;  2GTX A;  4RZZ A;  1C23 A;  1XNZ A;  2BN7 A;  2BWV A;  2V3X A;  1WL6 A;  3L7G A;  3PKB A;  5CDV A;  2P98 A;  4S2R P;  1WY2 A;  4S2T P;  4FO8 A;  4R60 A;  2EA4 A;  5CDL A;  4IKS A;  2GU6 A;  1QXZ A;  1WBQ A;  2Q93 A;  2P99 A;  3D27 A;  3FMR A;  4U75 A;  3PEB A;  3TAV A;  4U70 A;  1XGN A;  2B3K A;  1YW8 A;  3CTZ A;  4FLL A;  2EVO A;  5FCH A;  1QXY A;  3CB6 A;  2EVC A;  2EA2 A;  2GG9 A;  3OOO A;  1KQ9 A;  5D6E A;  1WKM A;  3L24 A;  3O5V A;  2MAT A;  4S00 A;  3TB5 A;  1R58 A;  1WN1 A;  3IU7 A;  4Z7M A;  2ADU A;  3IU8 A;  4MAT A;  3FM3 A;  2Q94 A;  4ZNG A;  4IDY A;  2BH3 A;  1M35 A;  3PKA A;  1QZY A;  2OAZ A;  3OVK A;  1A16 A;  2Q96 A;  4IU6 A;  3PKD A;  4U6J A;  4IKR A;  4OOK A;  2Q95 A;  1C27 A;  2GG8 A;  4IEC A;  5JI6 A;  2HOW A;  4QR8 A;  1YW9 A;  4U6E A;  5JHU A;  2GG0 A;  2BHD A;  5CNX A;  2BHC A;  2Q92 A;  4FLI A;  4A6V A;  4U1B A;  1Y1N A;  2BWW A;  3IU9 A;  3IL0 A;  3MX6 A;  3BIT A;  2BHB A;  5CIK A;  2P9A A;  2GG5 A;  4RZY A;  3PKC A;  3S6B A;  4RGZ 1;  1KQ0 A;  2EVM A;  2V6C A;  1YW7 A;  3IG4 A; 
#chains in the Genus database with same CATH topology
 3PKE A;  1JAW A;  4PNC A;  1WLR A;  2GU5 A;  3CB5 A;  5CE6 A;  2G6P A;  4FUK A;  1YJ3 A;  5E5B A;  2GA2 A;  4FLK A;  4JUQ A;  1BOA A;  1C21 A;  4FLJ A;  2ZSG A;  2GG7 A;  5FCF A;  1XGM A;  1N51 A;  1XGS A;  2DFI A;  1W7V A;  3PN9 A;  1KP0 A;  2BWX A;  2NQ7 A;  4B28 A;  3QOC A;  2GU4 A;  1C24 A;  2BWU A;  4U6W A;  1XGO A;  3I7M A;  4KM3 A;  1W2M A;  1R5G A;  4U6Z A;  5D6F A;  4FKC A;  1C22 A;  2V3Z A;  4U69 A;  4PV4 A;  2NQ6 A;  4S01 A;  1YVM A;  3FMQ A;  4EGE A;  5CDE A;  4IF7 A;  2GG3 A;  5E2C A;  4ZWO A;  2IW2 A;  3ROR A;  3Q6D A;  4FO7 A;  2GU7 A;  1O0X A;  5JFR A;  2V3Y A;  2GG2 A;  1B6A A;  2GZ5 A;  4IKU A;  1QXW A;  2B3L A;  2BWY A;  3MAT A;  1MAT A;  4U71 A;  2BWT A;  4ZWP A;  4IKT A;  3MR1 A;  2GGC A;  5CLS A;  1WL9 A;  1CHM A;  3BIP A;  2GGB A;  3BIQ A;  4U6C A;  3RVA A;  2OKN A;  2BB7 A;  1PV9 A;  1BN5 A;  4IPA A;  2Q8K A;  4U76 A;  2BHA A;  4ZWU A;  1R5H A;  2BWS A;  2B3H A;  4U73 A;  1B59 A;  4A6W A;  4HXX A;  2GTX A;  4RZZ A;  1C23 A;  1XNZ A;  2BN7 A;  2BWV A;  2V3X A;  1WL6 A;  3L7G A;  3PKB A;  5CDV A;  2P98 A;  4S2R P;  1WY2 A;  4S2T P;  4FO8 A;  4R60 A;  2EA4 A;  5CDL A;  4IKS A;  2GU6 A;  1QXZ A;  1WBQ A;  2Q93 A;  2P99 A;  3D27 A;  3FMR A;  4U75 A;  3PEB A;  3TAV A;  4U70 A;  1XGN A;  2B3K A;  1YW8 A;  3CTZ A;  4FLL A;  2EVO A;  5FCH A;  1QXY A;  3CB6 A;  2EVC A;  2EA2 A;  2GG9 A;  3OOO A;  1KQ9 A;  5D6E A;  1WKM A;  3L24 A;  3O5V A;  2MAT A;  4S00 A;  3TB5 A;  1R58 A;  1WN1 A;  3IU7 A;  4Z7M A;  2ADU A;  3IU8 A;  4MAT A;  3FM3 A;  2Q94 A;  4ZNG A;  4IDY A;  2BH3 A;  1M35 A;  3PKA A;  1QZY A;  2OAZ A;  3OVK A;  1A16 A;  2Q96 A;  4IU6 A;  3PKD A;  4U6J A;  4IKR A;  4OOK A;  2Q95 A;  1C27 A;  2GG8 A;  4IEC A;  5JI6 A;  2HOW A;  4QR8 A;  1YW9 A;  4U6E A;  5JHU A;  2GG0 A;  2BHD A;  5CNX A;  2BHC A;  2Q92 A;  4FLI A;  4A6V A;  4U1B A;  1Y1N A;  2BWW A;  3IU9 A;  3IL0 A;  3MX6 A;  3BIT A;  2BHB A;  5CIK A;  2P9A A;  2GG5 A;  4RZY A;  3PKC A;  3S6B A;  4RGZ 1;  1KQ0 A;  2EVM A;  2V6C A;  1YW7 A;  3IG4 A; 
#chains in the Genus database with same CATH homology
 3PKE A;  1JAW A;  4PNC A;  1WLR A;  2GU5 A;  3CB5 A;  5CE6 A;  2G6P A;  4FUK A;  1YJ3 A;  5E5B A;  2GA2 A;  4FLK A;  4JUQ A;  1BOA A;  1C21 A;  4FLJ A;  2ZSG A;  2GG7 A;  5FCF A;  1XGM A;  1N51 A;  1XGS A;  2DFI A;  1W7V A;  3PN9 A;  1KP0 A;  2BWX A;  2NQ7 A;  4B28 A;  3QOC A;  2GU4 A;  1C24 A;  2BWU A;  4U6W A;  1XGO A;  3I7M A;  4KM3 A;  1W2M A;  1R5G A;  4U6Z A;  5D6F A;  4FKC A;  1C22 A;  2V3Z A;  4U69 A;  4PV4 A;  2NQ6 A;  4S01 A;  1YVM A;  3FMQ A;  4EGE A;  5CDE A;  4IF7 A;  2GG3 A;  5E2C A;  4ZWO A;  2IW2 A;  3ROR A;  3Q6D A;  4FO7 A;  2GU7 A;  1O0X A;  5JFR A;  2V3Y A;  2GG2 A;  1B6A A;  2GZ5 A;  4IKU A;  1QXW A;  2B3L A;  2BWY A;  3MAT A;  1MAT A;  4U71 A;  2BWT A;  4ZWP A;  4IKT A;  3MR1 A;  2GGC A;  5CLS A;  1WL9 A;  1CHM A;  3BIP A;  2GGB A;  3BIQ A;  4U6C A;  3RVA A;  2OKN A;  2BB7 A;  1PV9 A;  1BN5 A;  4IPA A;  2Q8K A;  4U76 A;  2BHA A;  4ZWU A;  1R5H A;  2BWS A;  2B3H A;  4U73 A;  1B59 A;  4A6W A;  4HXX A;  2GTX A;  4RZZ A;  1C23 A;  1XNZ A;  2BN7 A;  2BWV A;  2V3X A;  1WL6 A;  3L7G A;  3PKB A;  5CDV A;  2P98 A;  4S2R P;  1WY2 A;  4S2T P;  4FO8 A;  4R60 A;  2EA4 A;  5CDL A;  4IKS A;  2GU6 A;  1QXZ A;  1WBQ A;  2Q93 A;  2P99 A;  3D27 A;  3FMR A;  4U75 A;  3PEB A;  3TAV A;  4U70 A;  1XGN A;  2B3K A;  1YW8 A;  3CTZ A;  4FLL A;  2EVO A;  5FCH A;  1QXY A;  3CB6 A;  2EVC A;  2EA2 A;  2GG9 A;  3OOO A;  1KQ9 A;  5D6E A;  1WKM A;  3L24 A;  3O5V A;  2MAT A;  4S00 A;  3TB5 A;  1R58 A;  1WN1 A;  3IU7 A;  4Z7M A;  2ADU A;  3IU8 A;  4MAT A;  3FM3 A;  2Q94 A;  4ZNG A;  4IDY A;  2BH3 A;  1M35 A;  3PKA A;  1QZY A;  2OAZ A;  3OVK A;  1A16 A;  2Q96 A;  4IU6 A;  3PKD A;  4U6J A;  4IKR A;  4OOK A;  2Q95 A;  1C27 A;  2GG8 A;  4IEC A;  5JI6 A;  2HOW A;  4QR8 A;  1YW9 A;  4U6E A;  5JHU A;  2GG0 A;  2BHD A;  5CNX A;  2BHC A;  2Q92 A;  4FLI A;  4A6V A;  4U1B A;  1Y1N A;  2BWW A;  3IU9 A;  3IL0 A;  3MX6 A;  3BIT A;  2BHB A;  5CIK A;  2P9A A;  2GG5 A;  4RZY A;  3PKC A;  3S6B A;  4RGZ 1;  1KQ0 A;  2EVM A;  2V6C A;  1YW7 A;  3IG4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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