5CE6A

N-terminal domain of fact complex subunit spt16 from cicer arietinum (chickpea)
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
435
structure length
426
Chain Sequence
SIDLNTFQTRLKAFYSHWDDRRTDLWGSSDAIAVACPPPSRYLKSTALFLWLLGFEFPETIMVFTKKQIHVLCSQKKASILESVKKPARESVGVEIILHVKPKNDDGASSMDAIIRAIRAQSSSTVGHIAREEPEGRLLDLWAEKLKNSKFRLSDVANGFSALFAAKSNEEITYIKRAAYLTGSVMKNFVVTKLENVIDEEKKILHSTLMEETEKVILDPAKVNCKLKADNVDICYPPIFQSGGKFDLRPSAVSNDEALYYDSASVIICAVGARYKSYCSNIARTFLIDADPIQSKAYEVLLKAQEAVIGSLKPGNKLSAAYLAAVSVVEKDAPDMVSCLTKSAGTGIGIEFRESGLNINAKNDQIVKEGMVFNVSLGFQNLHCENSKSKNKVFSLLLADTIIINKDKTDVVTSIGSKALKDVAYS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords FACT-Spt16
publication title Crystal structure and dynamics of Spt16N-domain of FACT complex from Cicer arietinum.
pubmed doi rcsb
source organism Cicer arietinum
molecule tags Transcription
total genus 149
structure length 426
sequence length 435
ec nomenclature
pdb deposition date 2015-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF14826 FACT-Spt16_Nlob FACT complex subunit SPT16 N-terminal lobe domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 5ce6A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 5ce6A02
3S6BA 2GU4A 2BHBA 2BH3A 2Q95A 1WLRA 3L24A 2OAZA 2GGCA 3IU9A 2BWUA 4FLIA 2G6PA 4S01A 1M35A 1R5HA 3MR1A 1QXYA 3PKEA 2B3KA 3IU7A 5CLSA 1WL9A 4FKCA 4U70A 4R60A 4S00A 1YJ3A 3I7MA 2BHAA 3BIQA 4EGEA 2V3YA 3CB6A 3PN9A 4HXXA 4PV4A 1KQ0A 2GU5A 3RORA 1XGMA 4U75A 1XGSA 4U6WA 4A6WA 5FCFA 1YW8A 2IW2A 4FLJA 1KP0A 2BHCA 2EVOA 3PKAA 3CB5A 3PEBA 1PV9A 4B28A 1QZYA 2GG3A 4IDYA 5CNXA 2GGBA 1C22A 4U1BA 2B3HA 5JI6A 4RZYA 1CHMA 1WY2A 4U6CA 1MATA 4QR8A 3Q6DA 1XGOA 2EA2A 2GZ5A 3MATA 5JHUA 2GG0A 1BN5A 4IKSA 4IKRA 1W7VA 2GU6A 3FMRA 4MATA 3D27A 2MATA 2BN7A 2GA2A 2B3LA 2P9AA 4PNCA 1N51A 4S2RP 1QXWA 4U6ZA 2ZSGA 4ZWUA 5D6FA 3TB5A 4IF7A 4OOKA 4A6VA 3QOCA 2P98A 3RVAA 5E2CA 4IKTA 3IL0A 3IG4A 3MX6A 4U69A 1JAWA 1Y1NA 2V6CA 1C27A 4FO7A 5D6EA 4ZWOA 5CDEA 1XNZA 1A16A 5E5BA 2BWXA 3FM3A 2GG9A 2GU7A 4U73A 4U71A 3O5VA 4U6JA 1YW9A 4U76A 4U6EA 2GG7A 5CE6A 4FUKA 2DFIA 2P99A 2BWVA 3IU8A 5JFRA 1WL6A 4IECA 2Q93A 5CIKA 2V3ZA 3PKDA 4JUQA 4RGZ1 2Q92A 2BWSA 3L7GA 2V3XA 1YVMA 4ZWPA 5CDLA 4IU6A 2NQ7A 1R5GA 2GG8A 2Q96A 4Z7MA 3PKCA 2BWYA 2Q8KA 2EVCA 1R58A 1WBQA 4RZZA 3OOOA 3PKBA 2GTXA 3BIPA 1KQ9A 1C23A 3BITA 2EVMA 2NQ6A 2BHDA 1WKMA 1C24A 2ADUA 3CTZA 2OKNA 2HOWA 3OVKA 1WN1A 4S2TP 4FLLA 1W2MA 4ZNGA 2BB7A 2BWWA 1QXZA 2GG5A 3TAVA 1C21A 1O0XA 4FO8A 1BOAA 1XGNA 2EA4A 1YW7A 3FMQA 1B6AA 4FLKA 5FCHA 1B59A 2Q94A 2GG2A 4IKUA 2BWTA 4KM3A 4IPAA 5CDVA
chains in the Genus database with same CATH superfamily
3S6BA 2GU4A 2BHBA 2BH3A 2Q95A 1WLRA 3L24A 2OAZA 2GGCA 3IU9A 2BWUA 4FLIA 2G6PA 4S01A 1M35A 1R5HA 3MR1A 1QXYA 3PKEA 2B3KA 3IU7A 5CLSA 1WL9A 4FKCA 4U70A 4R60A 4S00A 1YJ3A 3I7MA 2BHAA 3BIQA 4EGEA 2V3YA 3CB6A 3PN9A 4HXXA 4PV4A 1KQ0A 2GU5A 3RORA 1XGMA 4U75A 1XGSA 4U6WA 4A6WA 5FCFA 1YW8A 2IW2A 4FLJA 1KP0A 2BHCA 2EVOA 3PKAA 3CB5A 3PEBA 1PV9A 4B28A 1QZYA 2GG3A 4IDYA 5CNXA 2GGBA 1C22A 4U1BA 2B3HA 5JI6A 4RZYA 1CHMA 1WY2A 4U6CA 1MATA 4QR8A 3Q6DA 1XGOA 2EA2A 2GZ5A 3MATA 5JHUA 2GG0A 1BN5A 4IKSA 4IKRA 1W7VA 2GU6A 3FMRA 4MATA 3D27A 2MATA 2BN7A 2GA2A 2B3LA 2P9AA 4PNCA 1N51A 4S2RP 1QXWA 4U6ZA 2ZSGA 4ZWUA 5D6FA 3TB5A 4IF7A 4OOKA 4A6VA 3QOCA 2P98A 3RVAA 5E2CA 4IKTA 3IL0A 3IG4A 3MX6A 4U69A 1JAWA 1Y1NA 2V6CA 1C27A 4FO7A 5D6EA 4ZWOA 5CDEA 1XNZA 1A16A 5E5BA 2BWXA 3FM3A 2GG9A 2GU7A 4U73A 4U71A 3O5VA 4U6JA 1YW9A 4U76A 4U6EA 2GG7A 5CE6A 4FUKA 2DFIA 2P99A 2BWVA 3IU8A 5JFRA 1WL6A 4IECA 2Q93A 5CIKA 2V3ZA 3PKDA 4JUQA 4RGZ1 2Q92A 2BWSA 3L7GA 2V3XA 1YVMA 4ZWPA 5CDLA 4IU6A 2NQ7A 1R5GA 2GG8A 2Q96A 4Z7MA 3PKCA 2BWYA 2Q8KA 2EVCA 1R58A 1WBQA 4RZZA 3OOOA 3PKBA 2GTXA 3BIPA 1KQ9A 1C23A 3BITA 2EVMA 2NQ6A 2BHDA 1WKMA 1C24A 2ADUA 3CTZA 2OKNA 2HOWA 3OVKA 1WN1A 4S2TP 4FLLA 1W2MA 4ZNGA 2BB7A 2BWWA 1QXZA 2GG5A 3TAVA 1C21A 1O0XA 4FO8A 1BOAA 1XGNA 2EA4A 1YW7A 3FMQA 1B6AA 4FLKA 5FCHA 1B59A 2Q94A 2GG2A 4IKUA 2BWTA 4KM3A 4IPAA 5CDVA
chains in the Genus database with same CATH topology
3S6BA 2GU4A 2BHBA 2BH3A 2Q95A 1WLRA 3L24A 2OAZA 2GGCA 3IU9A 2BWUA 4FLIA 2G6PA 4S01A 1M35A 1R5HA 3MR1A 1QXYA 3PKEA 2B3KA 3IU7A 5CLSA 1WL9A 4FKCA 4U70A 4R60A 4S00A 1YJ3A 3I7MA 2BHAA 3BIQA 4EGEA 2V3YA 3CB6A 3PN9A 4HXXA 4PV4A 1KQ0A 2GU5A 3RORA 1XGMA 4U75A 1XGSA 4U6WA 4A6WA 5FCFA 1YW8A 2IW2A 4FLJA 1KP0A 2BHCA 2EVOA 3PKAA 3CB5A 3PEBA 1PV9A 4B28A 1QZYA 2GG3A 4IDYA 5CNXA 2GGBA 1C22A 4U1BA 2B3HA 5JI6A 4RZYA 1CHMA 1WY2A 4U6CA 1MATA 4QR8A 3Q6DA 1XGOA 2EA2A 2GZ5A 3MATA 5JHUA 2GG0A 1BN5A 4IKSA 4IKRA 1W7VA 2GU6A 3FMRA 4MATA 3D27A 2MATA 2BN7A 2GA2A 2B3LA 2P9AA 4PNCA 1N51A 4S2RP 1QXWA 4U6ZA 2ZSGA 4ZWUA 5D6FA 3TB5A 4IF7A 4OOKA 4A6VA 3QOCA 2P98A 3RVAA 5E2CA 4IKTA 3IL0A 3IG4A 3MX6A 4U69A 1JAWA 1Y1NA 2V6CA 1C27A 4FO7A 5D6EA 4ZWOA 5CDEA 1XNZA 1A16A 5E5BA 2BWXA 3FM3A 2GG9A 2GU7A 4U73A 4U71A 3O5VA 4U6JA 1YW9A 4U76A 4U6EA 2GG7A 5CE6A 4FUKA 2DFIA 2P99A 2BWVA 3IU8A 5JFRA 1WL6A 4IECA 2Q93A 5CIKA 2V3ZA 3PKDA 4JUQA 4RGZ1 2Q92A 2BWSA 3L7GA 2V3XA 1YVMA 4ZWPA 5CDLA 4IU6A 2NQ7A 1R5GA 2GG8A 2Q96A 4Z7MA 3PKCA 2BWYA 2Q8KA 2EVCA 1R58A 1WBQA 4RZZA 3OOOA 3PKBA 2GTXA 3BIPA 1KQ9A 1C23A 3BITA 2EVMA 2NQ6A 2BHDA 1WKMA 1C24A 2ADUA 3CTZA 2OKNA 2HOWA 3OVKA 1WN1A 4S2TP 4FLLA 1W2MA 4ZNGA 2BB7A 2BWWA 1QXZA 2GG5A 3TAVA 1C21A 1O0XA 4FO8A 1BOAA 1XGNA 2EA4A 1YW7A 3FMQA 1B6AA 4FLKA 5FCHA 1B59A 2Q94A 2GG2A 4IKUA 2BWTA 4KM3A 4IPAA 5CDVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3S6B A;  2GU4 A;  2BHB A;  2BH3 A;  2Q95 A;  1WLR A;  3L24 A;  2OAZ A;  2GGC A;  3IU9 A;  2BWU A;  4FLI A;  2G6P A;  4S01 A;  1M35 A;  1R5H A;  3MR1 A;  1QXY A;  3PKE A;  2B3K A;  3IU7 A;  5CLS A;  1WL9 A;  4FKC A;  4U70 A;  4R60 A;  4S00 A;  1YJ3 A;  3I7M A;  2BHA A;  3BIQ A;  4EGE A;  2V3Y A;  3CB6 A;  3PN9 A;  4HXX A;  4PV4 A;  1KQ0 A;  2GU5 A;  3ROR A;  1XGM A;  4U75 A;  1XGS A;  4U6W A;  4A6W A;  5FCF A;  1YW8 A;  2IW2 A;  4FLJ A;  1KP0 A;  2BHC A;  2EVO A;  3PKA A;  3CB5 A;  3PEB A;  1PV9 A;  4B28 A;  1QZY A;  2GG3 A;  4IDY A;  5CNX A;  2GGB A;  1C22 A;  4U1B A;  2B3H A;  5JI6 A;  4RZY A;  1CHM A;  1WY2 A;  4U6C A;  1MAT A;  4QR8 A;  3Q6D A;  1XGO A;  2EA2 A;  2GZ5 A;  3MAT A;  5JHU A;  2GG0 A;  1BN5 A;  4IKS A;  4IKR A;  1W7V A;  2GU6 A;  3FMR A;  4MAT A;  3D27 A;  2MAT A;  2BN7 A;  2GA2 A;  2B3L A;  2P9A A;  4PNC A;  1N51 A;  4S2R P;  1QXW A;  4U6Z A;  2ZSG A;  4ZWU A;  5D6F A;  3TB5 A;  4IF7 A;  4OOK A;  4A6V A;  3QOC A;  2P98 A;  3RVA A;  5E2C A;  4IKT A;  3IL0 A;  3IG4 A;  3MX6 A;  4U69 A;  1JAW A;  1Y1N A;  2V6C A;  1C27 A;  4FO7 A;  5D6E A;  4ZWO A;  5CDE A;  1XNZ A;  1A16 A;  5E5B A;  2BWX A;  3FM3 A;  2GG9 A;  2GU7 A;  4U73 A;  4U71 A;  3O5V A;  4U6J A;  1YW9 A;  4U76 A;  4U6E A;  2GG7 A;  5CE6 A;  4FUK A;  2DFI A;  2P99 A;  2BWV A;  3IU8 A;  5JFR A;  1WL6 A;  4IEC A;  2Q93 A;  5CIK A;  2V3Z A;  3PKD A;  4JUQ A;  4RGZ 1;  2Q92 A;  2BWS A;  3L7G A;  2V3X A;  1YVM A;  4ZWP A;  5CDL A;  4IU6 A;  2NQ7 A;  1R5G A;  2GG8 A;  2Q96 A;  4Z7M A;  3PKC A;  2BWY A;  2Q8K A;  2EVC A;  1R58 A;  1WBQ A;  4RZZ A;  3OOO A;  3PKB A;  2GTX A;  3BIP A;  1KQ9 A;  1C23 A;  3BIT A;  2EVM A;  2NQ6 A;  2BHD A;  1WKM A;  1C24 A;  2ADU A;  3CTZ A;  2OKN A;  2HOW A;  3OVK A;  1WN1 A;  4S2T P;  4FLL A;  1W2M A;  4ZNG A;  2BB7 A;  2BWW A;  1QXZ A;  2GG5 A;  3TAV A;  1C21 A;  1O0X A;  4FO8 A;  1BOA A;  1XGN A;  2EA4 A;  1YW7 A;  3FMQ A;  1B6A A;  4FLK A;  5FCH A;  1B59 A;  2Q94 A;  2GG2 A;  4IKU A;  2BWT A;  4KM3 A;  4IPA A;  5CDV A; 
#chains in the Genus database with same CATH topology
 3S6B A;  2GU4 A;  2BHB A;  2BH3 A;  2Q95 A;  1WLR A;  3L24 A;  2OAZ A;  2GGC A;  3IU9 A;  2BWU A;  4FLI A;  2G6P A;  4S01 A;  1M35 A;  1R5H A;  3MR1 A;  1QXY A;  3PKE A;  2B3K A;  3IU7 A;  5CLS A;  1WL9 A;  4FKC A;  4U70 A;  4R60 A;  4S00 A;  1YJ3 A;  3I7M A;  2BHA A;  3BIQ A;  4EGE A;  2V3Y A;  3CB6 A;  3PN9 A;  4HXX A;  4PV4 A;  1KQ0 A;  2GU5 A;  3ROR A;  1XGM A;  4U75 A;  1XGS A;  4U6W A;  4A6W A;  5FCF A;  1YW8 A;  2IW2 A;  4FLJ A;  1KP0 A;  2BHC A;  2EVO A;  3PKA A;  3CB5 A;  3PEB A;  1PV9 A;  4B28 A;  1QZY A;  2GG3 A;  4IDY A;  5CNX A;  2GGB A;  1C22 A;  4U1B A;  2B3H A;  5JI6 A;  4RZY A;  1CHM A;  1WY2 A;  4U6C A;  1MAT A;  4QR8 A;  3Q6D A;  1XGO A;  2EA2 A;  2GZ5 A;  3MAT A;  5JHU A;  2GG0 A;  1BN5 A;  4IKS A;  4IKR A;  1W7V A;  2GU6 A;  3FMR A;  4MAT A;  3D27 A;  2MAT A;  2BN7 A;  2GA2 A;  2B3L A;  2P9A A;  4PNC A;  1N51 A;  4S2R P;  1QXW A;  4U6Z A;  2ZSG A;  4ZWU A;  5D6F A;  3TB5 A;  4IF7 A;  4OOK A;  4A6V A;  3QOC A;  2P98 A;  3RVA A;  5E2C A;  4IKT A;  3IL0 A;  3IG4 A;  3MX6 A;  4U69 A;  1JAW A;  1Y1N A;  2V6C A;  1C27 A;  4FO7 A;  5D6E A;  4ZWO A;  5CDE A;  1XNZ A;  1A16 A;  5E5B A;  2BWX A;  3FM3 A;  2GG9 A;  2GU7 A;  4U73 A;  4U71 A;  3O5V A;  4U6J A;  1YW9 A;  4U76 A;  4U6E A;  2GG7 A;  5CE6 A;  4FUK A;  2DFI A;  2P99 A;  2BWV A;  3IU8 A;  5JFR A;  1WL6 A;  4IEC A;  2Q93 A;  5CIK A;  2V3Z A;  3PKD A;  4JUQ A;  4RGZ 1;  2Q92 A;  2BWS A;  3L7G A;  2V3X A;  1YVM A;  4ZWP A;  5CDL A;  4IU6 A;  2NQ7 A;  1R5G A;  2GG8 A;  2Q96 A;  4Z7M A;  3PKC A;  2BWY A;  2Q8K A;  2EVC A;  1R58 A;  1WBQ A;  4RZZ A;  3OOO A;  3PKB A;  2GTX A;  3BIP A;  1KQ9 A;  1C23 A;  3BIT A;  2EVM A;  2NQ6 A;  2BHD A;  1WKM A;  1C24 A;  2ADU A;  3CTZ A;  2OKN A;  2HOW A;  3OVK A;  1WN1 A;  4S2T P;  4FLL A;  1W2M A;  4ZNG A;  2BB7 A;  2BWW A;  1QXZ A;  2GG5 A;  3TAV A;  1C21 A;  1O0X A;  4FO8 A;  1BOA A;  1XGN A;  2EA4 A;  1YW7 A;  3FMQ A;  1B6A A;  4FLK A;  5FCH A;  1B59 A;  2Q94 A;  2GG2 A;  4IKU A;  2BWT A;  4KM3 A;  4IPA A;  5CDV A; 
#chains in the Genus database with same CATH homology
 3S6B A;  2GU4 A;  2BHB A;  2BH3 A;  2Q95 A;  1WLR A;  3L24 A;  2OAZ A;  2GGC A;  3IU9 A;  2BWU A;  4FLI A;  2G6P A;  4S01 A;  1M35 A;  1R5H A;  3MR1 A;  1QXY A;  3PKE A;  2B3K A;  3IU7 A;  5CLS A;  1WL9 A;  4FKC A;  4U70 A;  4R60 A;  4S00 A;  1YJ3 A;  3I7M A;  2BHA A;  3BIQ A;  4EGE A;  2V3Y A;  3CB6 A;  3PN9 A;  4HXX A;  4PV4 A;  1KQ0 A;  2GU5 A;  3ROR A;  1XGM A;  4U75 A;  1XGS A;  4U6W A;  4A6W A;  5FCF A;  1YW8 A;  2IW2 A;  4FLJ A;  1KP0 A;  2BHC A;  2EVO A;  3PKA A;  3CB5 A;  3PEB A;  1PV9 A;  4B28 A;  1QZY A;  2GG3 A;  4IDY A;  5CNX A;  2GGB A;  1C22 A;  4U1B A;  2B3H A;  5JI6 A;  4RZY A;  1CHM A;  1WY2 A;  4U6C A;  1MAT A;  4QR8 A;  3Q6D A;  1XGO A;  2EA2 A;  2GZ5 A;  3MAT A;  5JHU A;  2GG0 A;  1BN5 A;  4IKS A;  4IKR A;  1W7V A;  2GU6 A;  3FMR A;  4MAT A;  3D27 A;  2MAT A;  2BN7 A;  2GA2 A;  2B3L A;  2P9A A;  4PNC A;  1N51 A;  4S2R P;  1QXW A;  4U6Z A;  2ZSG A;  4ZWU A;  5D6F A;  3TB5 A;  4IF7 A;  4OOK A;  4A6V A;  3QOC A;  2P98 A;  3RVA A;  5E2C A;  4IKT A;  3IL0 A;  3IG4 A;  3MX6 A;  4U69 A;  1JAW A;  1Y1N A;  2V6C A;  1C27 A;  4FO7 A;  5D6E A;  4ZWO A;  5CDE A;  1XNZ A;  1A16 A;  5E5B A;  2BWX A;  3FM3 A;  2GG9 A;  2GU7 A;  4U73 A;  4U71 A;  3O5V A;  4U6J A;  1YW9 A;  4U76 A;  4U6E A;  2GG7 A;  5CE6 A;  4FUK A;  2DFI A;  2P99 A;  2BWV A;  3IU8 A;  5JFR A;  1WL6 A;  4IEC A;  2Q93 A;  5CIK A;  2V3Z A;  3PKD A;  4JUQ A;  4RGZ 1;  2Q92 A;  2BWS A;  3L7G A;  2V3X A;  1YVM A;  4ZWP A;  5CDL A;  4IU6 A;  2NQ7 A;  1R5G A;  2GG8 A;  2Q96 A;  4Z7M A;  3PKC A;  2BWY A;  2Q8K A;  2EVC A;  1R58 A;  1WBQ A;  4RZZ A;  3OOO A;  3PKB A;  2GTX A;  3BIP A;  1KQ9 A;  1C23 A;  3BIT A;  2EVM A;  2NQ6 A;  2BHD A;  1WKM A;  1C24 A;  2ADU A;  3CTZ A;  2OKN A;  2HOW A;  3OVK A;  1WN1 A;  4S2T P;  4FLL A;  1W2M A;  4ZNG A;  2BB7 A;  2BWW A;  1QXZ A;  2GG5 A;  3TAV A;  1C21 A;  1O0X A;  4FO8 A;  1BOA A;  1XGN A;  2EA4 A;  1YW7 A;  3FMQ A;  1B6A A;  4FLK A;  5FCH A;  1B59 A;  2Q94 A;  2GG2 A;  4IKU A;  2BWT A;  4KM3 A;  4IPA A;  5CDV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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