5CE6A

N-terminal domain of fact complex subunit spt16 from cicer arietinum (chickpea)
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
435
structure length
426
Chain Sequence
b'SIDLNTFQTRLKAFYSHWDDRRTDLWGSSDAIAVACPPPSRYLKSTALFLWLLGFEFPETIMVFTKKQIHVLCSQKKASILESVKKPARESVGVEIILHVKPKNDDGASSMDAIIRAIRAQSSSTVGHIAREEPEGRLLDLWAEKLKNSKFRLSDVANGFSALFAAKSNEEITYIKRAAYLTGSVMKNFVVTKLENVIDEEKKILHSTLMEETEKVILDPAKVNCKLKADNVDICYPPIFQSGGKFDLRPSAVSNDEALYYDSASVIICAVGARYKSYCSNIARTFLIDADPIQSKAYEVLLKAQEAVIGSLKPGNKLSAAYLAAVSVVEKDAPDMVSCLTKSAGTGIGIEFRESGLNINAKNDQIVKEGMVFNVSLGFQNLHCENSKSKNKVFSLLLADTIIINKDKTDVVTSIGSKALKDVAYS'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords FACT-Spt16
publication title Crystal structure and dynamics of Spt16N-domain of FACT complex from Cicer arietinum.
pubmed doi rcsb
source organism Cicer arietinum
molecule tags Transcription
total genus 149
structure length 426
sequence length 435
ec nomenclature
pdb deposition date 2015-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF14826 FACT-Spt16_Nlob FACT complex subunit SPT16 N-terminal lobe domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 5ce6A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 5ce6A02
2GU7A 2EA4A 4U70A 2NQ6A 4S2TP 2GG2A 4FO8A 4FO7A 4IKUA 2GG0A 1R58A 3RVAA 4B28A 2GU5A 2EVOA 4R60A 1YW8A 2GGCA 3D27A 4IKSA 1B59A 3TB5A 2Q95A 4IPAA 4PNCA 3QOCA 4IECA 5JFRA 2GG5A 3BIPA 1C24A 3IU8A 2DFIA 3BITA 4RGZ1 4S00A 5FCHA 1Y1NA 2BN7A 3Q6DA 2BHBA 5FCFA 2Q8KA 2MATA 5D6FA 1W2MA 4HXXA 4FKCA 1JAWA 2GGBA 1M35A 2ADUA 1QXZA 1YW7A 3PKDA 3PKAA 3IU7A 3I7MA 4U6JA 1W7VA 3CB6A 2GU6A 2EVCA 1QXYA 2Q93A 2P9AA 2B3LA 2BWUA 4U71A 1XGMA 1A16A 5JHUA 4ZWPA 2OAZA 4EGEA 3O5VA 2V3ZA 4IF7A 4FLIA 4U6ZA 1C21A 4U6EA 3MR1A 1XGSA 1KQ9A 4FUKA 2B3KA 5D6EA 2ZSGA 1R5HA 2BH3A 4ZNGA 3CB5A 2GZ5A 3FMRA 2BWTA 3L24A 2BHCA 3S6BA 1KQ0A 2GTXA 4U73A 1QZYA 2Q96A 1WN1A 5CIKA 2OKNA 2EA2A 1BN5A 5CDLA 1XGOA 5CDVA 3TAVA 5CDEA 2GG3A 2BB7A 1WBQA 4Z7MA 5E5BA 1C23A 3MX6A 2V6CA 5CNXA 4U76A 4ZWOA 4S01A 4S2RP 2NQ7A 2BHDA 1R5GA 4QR8A 2P99A 3FMQA 2GG8A 2BWWA 2GG7A 4IKTA 4U6CA 1WLRA 2IW2A 1C22A 3FM3A 1YJ3A 2GG9A 2V3YA 1WL6A 4A6VA 4ZWUA 4MATA 1WY2A 4FLLA 1B6AA 3PKBA 2BWVA 2Q92A 1MATA 5CLSA 3RORA 1XGNA 1KP0A 1YVMA 2BWSA 5JI6A 2B3HA 1O0XA 4JUQA 3IG4A 2Q94A 5CE6A 4U75A 2EVMA 1PV9A 4RZYA 1QXWA 3MATA 3PKCA 3OVKA 4U1BA 1YW9A 2BWXA 3PN9A 3OOOA 1XNZA 2GA2A 2BHAA 4KM3A 4OOKA 3L7GA 4U69A 1BOAA 3PEBA 2G6PA 1WL9A 1C27A 2HOWA 4PV4A 1N51A 2GU4A 4U6WA 4IKRA 4A6WA 3CTZA 4IDYA 2BWYA 4FLJA 4IU6A 3IU9A 4FLKA 4RZZA 3PKEA 1CHMA 3BIQA 3IL0A 5E2CA 1WKMA 2V3XA 2P98A
chains in the Genus database with same CATH superfamily
2GU7A 2EA4A 4U70A 2NQ6A 4S2TP 2GG2A 4FO8A 4FO7A 4IKUA 2GG0A 1R58A 3RVAA 4B28A 2GU5A 2EVOA 4R60A 1YW8A 2GGCA 3D27A 4IKSA 1B59A 3TB5A 2Q95A 4IPAA 4PNCA 3QOCA 4IECA 5JFRA 2GG5A 3BIPA 1C24A 3IU8A 2DFIA 3BITA 4RGZ1 4S00A 5FCHA 1Y1NA 2BN7A 3Q6DA 2BHBA 5FCFA 2Q8KA 2MATA 5D6FA 1W2MA 4HXXA 4FKCA 1JAWA 2GGBA 1M35A 2ADUA 1QXZA 1YW7A 3PKDA 3PKAA 3IU7A 3I7MA 4U6JA 1W7VA 3CB6A 2GU6A 2EVCA 1QXYA 2Q93A 2P9AA 2B3LA 2BWUA 4U71A 1XGMA 1A16A 5JHUA 4ZWPA 2OAZA 4EGEA 3O5VA 2V3ZA 4IF7A 4FLIA 4U6ZA 1C21A 4U6EA 3MR1A 1XGSA 1KQ9A 4FUKA 2B3KA 5D6EA 2ZSGA 1R5HA 2BH3A 4ZNGA 3CB5A 2GZ5A 3FMRA 2BWTA 3L24A 2BHCA 3S6BA 1KQ0A 2GTXA 4U73A 1QZYA 2Q96A 1WN1A 5CIKA 2OKNA 2EA2A 1BN5A 5CDLA 1XGOA 5CDVA 3TAVA 5CDEA 2GG3A 2BB7A 1WBQA 4Z7MA 5E5BA 1C23A 3MX6A 2V6CA 5CNXA 4U76A 4ZWOA 4S01A 4S2RP 2NQ7A 2BHDA 1R5GA 4QR8A 2P99A 3FMQA 2GG8A 2BWWA 2GG7A 4IKTA 4U6CA 1WLRA 2IW2A 1C22A 3FM3A 1YJ3A 2GG9A 2V3YA 1WL6A 4A6VA 4ZWUA 4MATA 1WY2A 4FLLA 1B6AA 3PKBA 2BWVA 2Q92A 1MATA 5CLSA 3RORA 1XGNA 1KP0A 1YVMA 2BWSA 5JI6A 2B3HA 1O0XA 4JUQA 3IG4A 2Q94A 5CE6A 4U75A 2EVMA 1PV9A 4RZYA 1QXWA 3MATA 3PKCA 3OVKA 4U1BA 1YW9A 2BWXA 3PN9A 3OOOA 1XNZA 2GA2A 2BHAA 4KM3A 4OOKA 3L7GA 4U69A 1BOAA 3PEBA 2G6PA 1WL9A 1C27A 2HOWA 4PV4A 1N51A 2GU4A 4U6WA 4IKRA 4A6WA 3CTZA 4IDYA 2BWYA 4FLJA 4IU6A 3IU9A 4FLKA 4RZZA 3PKEA 1CHMA 3BIQA 3IL0A 5E2CA 1WKMA 2V3XA 2P98A
chains in the Genus database with same CATH topology
2GU7A 2EA4A 4U70A 2NQ6A 4S2TP 2GG2A 4FO8A 4FO7A 4IKUA 2GG0A 1R58A 3RVAA 4B28A 2GU5A 2EVOA 4R60A 1YW8A 2GGCA 3D27A 4IKSA 1B59A 3TB5A 2Q95A 4IPAA 4PNCA 3QOCA 4IECA 5JFRA 2GG5A 3BIPA 1C24A 3IU8A 2DFIA 3BITA 4RGZ1 4S00A 5FCHA 1Y1NA 2BN7A 3Q6DA 2BHBA 5FCFA 2Q8KA 2MATA 5D6FA 1W2MA 4HXXA 4FKCA 1JAWA 2GGBA 1M35A 2ADUA 1QXZA 1YW7A 3PKDA 3PKAA 3IU7A 3I7MA 4U6JA 1W7VA 3CB6A 2GU6A 2EVCA 1QXYA 2Q93A 2P9AA 2B3LA 2BWUA 4U71A 1XGMA 1A16A 5JHUA 4ZWPA 2OAZA 4EGEA 3O5VA 2V3ZA 4IF7A 4FLIA 4U6ZA 1C21A 4U6EA 3MR1A 1XGSA 1KQ9A 4FUKA 2B3KA 5D6EA 2ZSGA 1R5HA 2BH3A 4ZNGA 3CB5A 2GZ5A 3FMRA 2BWTA 3L24A 2BHCA 3S6BA 1KQ0A 2GTXA 4U73A 1QZYA 2Q96A 1WN1A 5CIKA 2OKNA 2EA2A 1BN5A 5CDLA 1XGOA 5CDVA 3TAVA 5CDEA 2GG3A 2BB7A 1WBQA 4Z7MA 5E5BA 1C23A 3MX6A 2V6CA 5CNXA 4U76A 4ZWOA 4S01A 4S2RP 2NQ7A 2BHDA 1R5GA 4QR8A 2P99A 3FMQA 2GG8A 2BWWA 2GG7A 4IKTA 4U6CA 1WLRA 2IW2A 1C22A 3FM3A 1YJ3A 2GG9A 2V3YA 1WL6A 4A6VA 4ZWUA 4MATA 1WY2A 4FLLA 1B6AA 3PKBA 2BWVA 2Q92A 1MATA 5CLSA 3RORA 1XGNA 1KP0A 1YVMA 2BWSA 5JI6A 2B3HA 1O0XA 4JUQA 3IG4A 2Q94A 5CE6A 4U75A 2EVMA 1PV9A 4RZYA 1QXWA 3MATA 3PKCA 3OVKA 4U1BA 1YW9A 2BWXA 3PN9A 3OOOA 1XNZA 2GA2A 2BHAA 4KM3A 4OOKA 3L7GA 4U69A 1BOAA 3PEBA 2G6PA 1WL9A 1C27A 2HOWA 4PV4A 1N51A 2GU4A 4U6WA 4IKRA 4A6WA 3CTZA 4IDYA 2BWYA 4FLJA 4IU6A 3IU9A 4FLKA 4RZZA 3PKEA 1CHMA 3BIQA 3IL0A 5E2CA 1WKMA 2V3XA 2P98A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2GU7 A;  2EA4 A;  4U70 A;  2NQ6 A;  4S2T P;  2GG2 A;  4FO8 A;  4FO7 A;  4IKU A;  2GG0 A;  1R58 A;  3RVA A;  4B28 A;  2GU5 A;  2EVO A;  4R60 A;  1YW8 A;  2GGC A;  3D27 A;  4IKS A;  1B59 A;  3TB5 A;  2Q95 A;  4IPA A;  4PNC A;  3QOC A;  4IEC A;  5JFR A;  2GG5 A;  3BIP A;  1C24 A;  3IU8 A;  2DFI A;  3BIT A;  4RGZ 1;  4S00 A;  5FCH A;  1Y1N A;  2BN7 A;  3Q6D A;  2BHB A;  5FCF A;  2Q8K A;  2MAT A;  5D6F A;  1W2M A;  4HXX A;  4FKC A;  1JAW A;  2GGB A;  1M35 A;  2ADU A;  1QXZ A;  1YW7 A;  3PKD A;  3PKA A;  3IU7 A;  3I7M A;  4U6J A;  1W7V A;  3CB6 A;  2GU6 A;  2EVC A;  1QXY A;  2Q93 A;  2P9A A;  2B3L A;  2BWU A;  4U71 A;  1XGM A;  1A16 A;  5JHU A;  4ZWP A;  2OAZ A;  4EGE A;  3O5V A;  2V3Z A;  4IF7 A;  4FLI A;  4U6Z A;  1C21 A;  4U6E A;  3MR1 A;  1XGS A;  1KQ9 A;  4FUK A;  2B3K A;  5D6E A;  2ZSG A;  1R5H A;  2BH3 A;  4ZNG A;  3CB5 A;  2GZ5 A;  3FMR A;  2BWT A;  3L24 A;  2BHC A;  3S6B A;  1KQ0 A;  2GTX A;  4U73 A;  1QZY A;  2Q96 A;  1WN1 A;  5CIK A;  2OKN A;  2EA2 A;  1BN5 A;  5CDL A;  1XGO A;  5CDV A;  3TAV A;  5CDE A;  2GG3 A;  2BB7 A;  1WBQ A;  4Z7M A;  5E5B A;  1C23 A;  3MX6 A;  2V6C A;  5CNX A;  4U76 A;  4ZWO A;  4S01 A;  4S2R P;  2NQ7 A;  2BHD A;  1R5G A;  4QR8 A;  2P99 A;  3FMQ A;  2GG8 A;  2BWW A;  2GG7 A;  4IKT A;  4U6C A;  1WLR A;  2IW2 A;  1C22 A;  3FM3 A;  1YJ3 A;  2GG9 A;  2V3Y A;  1WL6 A;  4A6V A;  4ZWU A;  4MAT A;  1WY2 A;  4FLL A;  1B6A A;  3PKB A;  2BWV A;  2Q92 A;  1MAT A;  5CLS A;  3ROR A;  1XGN A;  1KP0 A;  1YVM A;  2BWS A;  5JI6 A;  2B3H A;  1O0X A;  4JUQ A;  3IG4 A;  2Q94 A;  5CE6 A;  4U75 A;  2EVM A;  1PV9 A;  4RZY A;  1QXW A;  3MAT A;  3PKC A;  3OVK A;  4U1B A;  1YW9 A;  2BWX A;  3PN9 A;  3OOO A;  1XNZ A;  2GA2 A;  2BHA A;  4KM3 A;  4OOK A;  3L7G A;  4U69 A;  1BOA A;  3PEB A;  2G6P A;  1WL9 A;  1C27 A;  2HOW A;  4PV4 A;  1N51 A;  2GU4 A;  4U6W A;  4IKR A;  4A6W A;  3CTZ A;  4IDY A;  2BWY A;  4FLJ A;  4IU6 A;  3IU9 A;  4FLK A;  4RZZ A;  3PKE A;  1CHM A;  3BIQ A;  3IL0 A;  5E2C A;  1WKM A;  2V3X A;  2P98 A; 
#chains in the Genus database with same CATH topology
 2GU7 A;  2EA4 A;  4U70 A;  2NQ6 A;  4S2T P;  2GG2 A;  4FO8 A;  4FO7 A;  4IKU A;  2GG0 A;  1R58 A;  3RVA A;  4B28 A;  2GU5 A;  2EVO A;  4R60 A;  1YW8 A;  2GGC A;  3D27 A;  4IKS A;  1B59 A;  3TB5 A;  2Q95 A;  4IPA A;  4PNC A;  3QOC A;  4IEC A;  5JFR A;  2GG5 A;  3BIP A;  1C24 A;  3IU8 A;  2DFI A;  3BIT A;  4RGZ 1;  4S00 A;  5FCH A;  1Y1N A;  2BN7 A;  3Q6D A;  2BHB A;  5FCF A;  2Q8K A;  2MAT A;  5D6F A;  1W2M A;  4HXX A;  4FKC A;  1JAW A;  2GGB A;  1M35 A;  2ADU A;  1QXZ A;  1YW7 A;  3PKD A;  3PKA A;  3IU7 A;  3I7M A;  4U6J A;  1W7V A;  3CB6 A;  2GU6 A;  2EVC A;  1QXY A;  2Q93 A;  2P9A A;  2B3L A;  2BWU A;  4U71 A;  1XGM A;  1A16 A;  5JHU A;  4ZWP A;  2OAZ A;  4EGE A;  3O5V A;  2V3Z A;  4IF7 A;  4FLI A;  4U6Z A;  1C21 A;  4U6E A;  3MR1 A;  1XGS A;  1KQ9 A;  4FUK A;  2B3K A;  5D6E A;  2ZSG A;  1R5H A;  2BH3 A;  4ZNG A;  3CB5 A;  2GZ5 A;  3FMR A;  2BWT A;  3L24 A;  2BHC A;  3S6B A;  1KQ0 A;  2GTX A;  4U73 A;  1QZY A;  2Q96 A;  1WN1 A;  5CIK A;  2OKN A;  2EA2 A;  1BN5 A;  5CDL A;  1XGO A;  5CDV A;  3TAV A;  5CDE A;  2GG3 A;  2BB7 A;  1WBQ A;  4Z7M A;  5E5B A;  1C23 A;  3MX6 A;  2V6C A;  5CNX A;  4U76 A;  4ZWO A;  4S01 A;  4S2R P;  2NQ7 A;  2BHD A;  1R5G A;  4QR8 A;  2P99 A;  3FMQ A;  2GG8 A;  2BWW A;  2GG7 A;  4IKT A;  4U6C A;  1WLR A;  2IW2 A;  1C22 A;  3FM3 A;  1YJ3 A;  2GG9 A;  2V3Y A;  1WL6 A;  4A6V A;  4ZWU A;  4MAT A;  1WY2 A;  4FLL A;  1B6A A;  3PKB A;  2BWV A;  2Q92 A;  1MAT A;  5CLS A;  3ROR A;  1XGN A;  1KP0 A;  1YVM A;  2BWS A;  5JI6 A;  2B3H A;  1O0X A;  4JUQ A;  3IG4 A;  2Q94 A;  5CE6 A;  4U75 A;  2EVM A;  1PV9 A;  4RZY A;  1QXW A;  3MAT A;  3PKC A;  3OVK A;  4U1B A;  1YW9 A;  2BWX A;  3PN9 A;  3OOO A;  1XNZ A;  2GA2 A;  2BHA A;  4KM3 A;  4OOK A;  3L7G A;  4U69 A;  1BOA A;  3PEB A;  2G6P A;  1WL9 A;  1C27 A;  2HOW A;  4PV4 A;  1N51 A;  2GU4 A;  4U6W A;  4IKR A;  4A6W A;  3CTZ A;  4IDY A;  2BWY A;  4FLJ A;  4IU6 A;  3IU9 A;  4FLK A;  4RZZ A;  3PKE A;  1CHM A;  3BIQ A;  3IL0 A;  5E2C A;  1WKM A;  2V3X A;  2P98 A; 
#chains in the Genus database with same CATH homology
 2GU7 A;  2EA4 A;  4U70 A;  2NQ6 A;  4S2T P;  2GG2 A;  4FO8 A;  4FO7 A;  4IKU A;  2GG0 A;  1R58 A;  3RVA A;  4B28 A;  2GU5 A;  2EVO A;  4R60 A;  1YW8 A;  2GGC A;  3D27 A;  4IKS A;  1B59 A;  3TB5 A;  2Q95 A;  4IPA A;  4PNC A;  3QOC A;  4IEC A;  5JFR A;  2GG5 A;  3BIP A;  1C24 A;  3IU8 A;  2DFI A;  3BIT A;  4RGZ 1;  4S00 A;  5FCH A;  1Y1N A;  2BN7 A;  3Q6D A;  2BHB A;  5FCF A;  2Q8K A;  2MAT A;  5D6F A;  1W2M A;  4HXX A;  4FKC A;  1JAW A;  2GGB A;  1M35 A;  2ADU A;  1QXZ A;  1YW7 A;  3PKD A;  3PKA A;  3IU7 A;  3I7M A;  4U6J A;  1W7V A;  3CB6 A;  2GU6 A;  2EVC A;  1QXY A;  2Q93 A;  2P9A A;  2B3L A;  2BWU A;  4U71 A;  1XGM A;  1A16 A;  5JHU A;  4ZWP A;  2OAZ A;  4EGE A;  3O5V A;  2V3Z A;  4IF7 A;  4FLI A;  4U6Z A;  1C21 A;  4U6E A;  3MR1 A;  1XGS A;  1KQ9 A;  4FUK A;  2B3K A;  5D6E A;  2ZSG A;  1R5H A;  2BH3 A;  4ZNG A;  3CB5 A;  2GZ5 A;  3FMR A;  2BWT A;  3L24 A;  2BHC A;  3S6B A;  1KQ0 A;  2GTX A;  4U73 A;  1QZY A;  2Q96 A;  1WN1 A;  5CIK A;  2OKN A;  2EA2 A;  1BN5 A;  5CDL A;  1XGO A;  5CDV A;  3TAV A;  5CDE A;  2GG3 A;  2BB7 A;  1WBQ A;  4Z7M A;  5E5B A;  1C23 A;  3MX6 A;  2V6C A;  5CNX A;  4U76 A;  4ZWO A;  4S01 A;  4S2R P;  2NQ7 A;  2BHD A;  1R5G A;  4QR8 A;  2P99 A;  3FMQ A;  2GG8 A;  2BWW A;  2GG7 A;  4IKT A;  4U6C A;  1WLR A;  2IW2 A;  1C22 A;  3FM3 A;  1YJ3 A;  2GG9 A;  2V3Y A;  1WL6 A;  4A6V A;  4ZWU A;  4MAT A;  1WY2 A;  4FLL A;  1B6A A;  3PKB A;  2BWV A;  2Q92 A;  1MAT A;  5CLS A;  3ROR A;  1XGN A;  1KP0 A;  1YVM A;  2BWS A;  5JI6 A;  2B3H A;  1O0X A;  4JUQ A;  3IG4 A;  2Q94 A;  5CE6 A;  4U75 A;  2EVM A;  1PV9 A;  4RZY A;  1QXW A;  3MAT A;  3PKC A;  3OVK A;  4U1B A;  1YW9 A;  2BWX A;  3PN9 A;  3OOO A;  1XNZ A;  2GA2 A;  2BHA A;  4KM3 A;  4OOK A;  3L7G A;  4U69 A;  1BOA A;  3PEB A;  2G6P A;  1WL9 A;  1C27 A;  2HOW A;  4PV4 A;  1N51 A;  2GU4 A;  4U6W A;  4IKR A;  4A6W A;  3CTZ A;  4IDY A;  2BWY A;  4FLJ A;  4IU6 A;  3IU9 A;  4FLK A;  4RZZ A;  3PKE A;  1CHM A;  3BIQ A;  3IL0 A;  5E2C A;  1WKM A;  2V3X A;  2P98 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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