5CE6A

N-terminal domain of fact complex subunit spt16 from cicer arietinum (chickpea)
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
435
structure length
426
Chain Sequence
SIDLNTFQTRLKAFYSHWDDRRTDLWGSSDAIAVACPPPSRYLKSTALFLWLLGFEFPETIMVFTKKQIHVLCSQKKASILESVKKPARESVGVEIILHVKPKNDDGASSMDAIIRAIRAQSSSTVGHIAREEPEGRLLDLWAEKLKNSKFRLSDVANGFSALFAAKSNEEITYIKRAAYLTGSVMKNFVVTKLENVIDEEKKILHSTLMEETEKVILDPAKVNCKLKADNVDICYPPIFQSGGKFDLRPSAVSNDEALYYDSASVIICAVGARYKSYCSNIARTFLIDADPIQSKAYEVLLKAQEAVIGSLKPGNKLSAAYLAAVSVVEKDAPDMVSCLTKSAGTGIGIEFRESGLNINAKNDQIVKEGMVFNVSLGFQNLHCENSKSKNKVFSLLLADTIIINKDKTDVVTSIGSKALKDVAYS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure and dynamics of Spt16N-domain of FACT complex from Cicer arietinum.
pubmed doi rcsb
source organism Cicer arietinum
molecule tags Transcription
molecule keywords FACT-Spt16
total genus 149
structure length 426
sequence length 435
ec nomenclature
pdb deposition date 2015-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF14826 FACT-Spt16_Nlob FACT complex subunit SPT16 N-terminal lobe domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 5ce6A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 5ce6A02
3BIPA 4IF7A 3S6BA 4HXXA 2P99A 4OOKA 1MATA 4MATA 4U6EA 1W2MA 5D6FA 1BOAA 2BHCA 5CIKA 2B3KA 2Q92A 1WN1A 5FCHA 4RGZ1 2GG7A 2BWXA 5CDVA 2GG8A 5D6EA 2EVOA 4EGEA 1M35A 3IU7A 2GU4A 4U69A 4RZZA 2P98A 1QXWA 1YJ3A 2Q95A 5CE6A 3BIQA 2V6CA 4FO8A 4FUKA 1WL6A 4ZNGA 4R60A 2BWVA 2EVCA 2IW2A 4IECA 5CLSA 3L24A 5E2CA 1BN5A 3D27A 4FLIA 5JFRA 3IL0A 1W7VA 2GG5A 4U70A 2GG9A 2GGCA 4ZWOA 2GU5A 1R5GA 2GU6A 3IU8A 3RORA 5E5BA 3CB6A 1WY2A 1N51A 3TAVA 2BWUA 1C23A 3I7MA 1QZYA 4FLJA 3CB5A 4S00A 1C21A 4FKCA 1PV9A 1C27A 2Q96A 1XNZA 1R58A 2Q94A 1A16A 2EA4A 5CDLA 2B3HA 5JI6A 1JAWA 4IKTA 5CNXA 3PKBA 4RZYA 2HOWA 3PEBA 3IG4A 2V3XA 2P9AA 2BHAA 2OAZA 1WL9A 4IKUA 4IKRA 4U6WA 1YW8A 2B3LA 4FLKA 4U6JA 3QOCA 2MATA 4KM3A 4A6VA 4S2RP 4ZWUA 2Q8KA 1YW7A 4U73A 3PKCA 1XGSA 2V3ZA 2G6PA 2BN7A 4U71A 2BH3A 2BWSA 4U75A 5CDEA 2OKNA 4U1BA 2GU7A 2ADUA 3TB5A 3PN9A 3IU9A 2GZ5A 1XGOA 4IDYA 4PV4A 4B28A 1KQ9A 1KP0A 1XGNA 1WLRA 3L7GA 4FO7A 2GA2A 5JHUA 2BB7A 4U6CA 4IKSA 2BWTA 1O0XA 3MX6A 4QR8A 2GTXA 4S2TP 2NQ6A 4JUQA 3Q6DA 2GG0A 4IPAA 1CHMA 4U6ZA 3FM3A 4ZWPA 1YW9A 1YVMA 1R5HA 2GG3A 3MATA 1QXYA 2NQ7A 4IU6A 2BWWA 4FLLA 2BHBA 3OOOA 1B6AA 3O5VA 2DFIA 1KQ0A 3MR1A 3CTZA 3FMQA 5FCFA 4Z7MA 3OVKA 3PKEA 1C22A 1C24A 1B59A 3FMRA 1WKMA 4S01A 2GG2A 1QXZA 2EA2A 3PKDA 2Q93A 2EVMA 3BITA 4A6WA 4U76A 1WBQA 2BWYA 1XGMA 3PKAA 2V3YA 2GGBA 1Y1NA 2BHDA 4PNCA 3RVAA 2ZSGA
chains in the Genus database with same CATH superfamily
3BIPA 4IF7A 3S6BA 4HXXA 2P99A 4OOKA 1MATA 4MATA 4U6EA 1W2MA 5D6FA 1BOAA 2BHCA 5CIKA 2B3KA 2Q92A 1WN1A 5FCHA 4RGZ1 2GG7A 2BWXA 5CDVA 2GG8A 5D6EA 2EVOA 4EGEA 1M35A 3IU7A 2GU4A 4U69A 4RZZA 2P98A 1QXWA 1YJ3A 2Q95A 5CE6A 3BIQA 2V6CA 4FO8A 4FUKA 1WL6A 4ZNGA 4R60A 2BWVA 2EVCA 2IW2A 4IECA 5CLSA 3L24A 5E2CA 1BN5A 3D27A 4FLIA 5JFRA 3IL0A 1W7VA 2GG5A 4U70A 2GG9A 2GGCA 4ZWOA 2GU5A 1R5GA 2GU6A 3IU8A 3RORA 5E5BA 3CB6A 1WY2A 1N51A 3TAVA 2BWUA 1C23A 3I7MA 1QZYA 4FLJA 3CB5A 4S00A 1C21A 4FKCA 1PV9A 1C27A 2Q96A 1XNZA 1R58A 2Q94A 1A16A 2EA4A 5CDLA 2B3HA 5JI6A 1JAWA 4IKTA 5CNXA 3PKBA 4RZYA 2HOWA 3PEBA 3IG4A 2V3XA 2P9AA 2BHAA 2OAZA 1WL9A 4IKUA 4IKRA 4U6WA 1YW8A 2B3LA 4FLKA 4U6JA 3QOCA 2MATA 4KM3A 4A6VA 4S2RP 4ZWUA 2Q8KA 1YW7A 4U73A 3PKCA 1XGSA 2V3ZA 2G6PA 2BN7A 4U71A 2BH3A 2BWSA 4U75A 5CDEA 2OKNA 4U1BA 2GU7A 2ADUA 3TB5A 3PN9A 3IU9A 2GZ5A 1XGOA 4IDYA 4PV4A 4B28A 1KQ9A 1KP0A 1XGNA 1WLRA 3L7GA 4FO7A 2GA2A 5JHUA 2BB7A 4U6CA 4IKSA 2BWTA 1O0XA 3MX6A 4QR8A 2GTXA 4S2TP 2NQ6A 4JUQA 3Q6DA 2GG0A 4IPAA 1CHMA 4U6ZA 3FM3A 4ZWPA 1YW9A 1YVMA 1R5HA 2GG3A 3MATA 1QXYA 2NQ7A 4IU6A 2BWWA 4FLLA 2BHBA 3OOOA 1B6AA 3O5VA 2DFIA 1KQ0A 3MR1A 3CTZA 3FMQA 5FCFA 4Z7MA 3OVKA 3PKEA 1C22A 1C24A 1B59A 3FMRA 1WKMA 4S01A 2GG2A 1QXZA 2EA2A 3PKDA 2Q93A 2EVMA 3BITA 4A6WA 4U76A 1WBQA 2BWYA 1XGMA 3PKAA 2V3YA 2GGBA 1Y1NA 2BHDA 4PNCA 3RVAA 2ZSGA
chains in the Genus database with same CATH topology
3BIPA 4IF7A 3S6BA 4HXXA 2P99A 4OOKA 1MATA 4MATA 4U6EA 1W2MA 5D6FA 1BOAA 2BHCA 5CIKA 2B3KA 2Q92A 1WN1A 5FCHA 4RGZ1 2GG7A 2BWXA 5CDVA 2GG8A 5D6EA 2EVOA 4EGEA 1M35A 3IU7A 2GU4A 4U69A 4RZZA 2P98A 1QXWA 1YJ3A 2Q95A 5CE6A 3BIQA 2V6CA 4FO8A 4FUKA 1WL6A 4ZNGA 4R60A 2BWVA 2EVCA 2IW2A 4IECA 5CLSA 3L24A 5E2CA 1BN5A 3D27A 4FLIA 5JFRA 3IL0A 1W7VA 2GG5A 4U70A 2GG9A 2GGCA 4ZWOA 2GU5A 1R5GA 2GU6A 3IU8A 3RORA 5E5BA 3CB6A 1WY2A 1N51A 3TAVA 2BWUA 1C23A 3I7MA 1QZYA 4FLJA 3CB5A 4S00A 1C21A 4FKCA 1PV9A 1C27A 2Q96A 1XNZA 1R58A 2Q94A 1A16A 2EA4A 5CDLA 2B3HA 5JI6A 1JAWA 4IKTA 5CNXA 3PKBA 4RZYA 2HOWA 3PEBA 3IG4A 2V3XA 2P9AA 2BHAA 2OAZA 1WL9A 4IKUA 4IKRA 4U6WA 1YW8A 2B3LA 4FLKA 4U6JA 3QOCA 2MATA 4KM3A 4A6VA 4S2RP 4ZWUA 2Q8KA 1YW7A 4U73A 3PKCA 1XGSA 2V3ZA 2G6PA 2BN7A 4U71A 2BH3A 2BWSA 4U75A 5CDEA 2OKNA 4U1BA 2GU7A 2ADUA 3TB5A 3PN9A 3IU9A 2GZ5A 1XGOA 4IDYA 4PV4A 4B28A 1KQ9A 1KP0A 1XGNA 1WLRA 3L7GA 4FO7A 2GA2A 5JHUA 2BB7A 4U6CA 4IKSA 2BWTA 1O0XA 3MX6A 4QR8A 2GTXA 4S2TP 2NQ6A 4JUQA 3Q6DA 2GG0A 4IPAA 1CHMA 4U6ZA 3FM3A 4ZWPA 1YW9A 1YVMA 1R5HA 2GG3A 3MATA 1QXYA 2NQ7A 4IU6A 2BWWA 4FLLA 2BHBA 3OOOA 1B6AA 3O5VA 2DFIA 1KQ0A 3MR1A 3CTZA 3FMQA 5FCFA 4Z7MA 3OVKA 3PKEA 1C22A 1C24A 1B59A 3FMRA 1WKMA 4S01A 2GG2A 1QXZA 2EA2A 3PKDA 2Q93A 2EVMA 3BITA 4A6WA 4U76A 1WBQA 2BWYA 1XGMA 3PKAA 2V3YA 2GGBA 1Y1NA 2BHDA 4PNCA 3RVAA 2ZSGA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BIP A;  4IF7 A;  3S6B A;  4HXX A;  2P99 A;  4OOK A;  1MAT A;  4MAT A;  4U6E A;  1W2M A;  5D6F A;  1BOA A;  2BHC A;  5CIK A;  2B3K A;  2Q92 A;  1WN1 A;  5FCH A;  4RGZ 1;  2GG7 A;  2BWX A;  5CDV A;  2GG8 A;  5D6E A;  2EVO A;  4EGE A;  1M35 A;  3IU7 A;  2GU4 A;  4U69 A;  4RZZ A;  2P98 A;  1QXW A;  1YJ3 A;  2Q95 A;  5CE6 A;  3BIQ A;  2V6C A;  4FO8 A;  4FUK A;  1WL6 A;  4ZNG A;  4R60 A;  2BWV A;  2EVC A;  2IW2 A;  4IEC A;  5CLS A;  3L24 A;  5E2C A;  1BN5 A;  3D27 A;  4FLI A;  5JFR A;  3IL0 A;  1W7V A;  2GG5 A;  4U70 A;  2GG9 A;  2GGC A;  4ZWO A;  2GU5 A;  1R5G A;  2GU6 A;  3IU8 A;  3ROR A;  5E5B A;  3CB6 A;  1WY2 A;  1N51 A;  3TAV A;  2BWU A;  1C23 A;  3I7M A;  1QZY A;  4FLJ A;  3CB5 A;  4S00 A;  1C21 A;  4FKC A;  1PV9 A;  1C27 A;  2Q96 A;  1XNZ A;  1R58 A;  2Q94 A;  1A16 A;  2EA4 A;  5CDL A;  2B3H A;  5JI6 A;  1JAW A;  4IKT A;  5CNX A;  3PKB A;  4RZY A;  2HOW A;  3PEB A;  3IG4 A;  2V3X A;  2P9A A;  2BHA A;  2OAZ A;  1WL9 A;  4IKU A;  4IKR A;  4U6W A;  1YW8 A;  2B3L A;  4FLK A;  4U6J A;  3QOC A;  2MAT A;  4KM3 A;  4A6V A;  4S2R P;  4ZWU A;  2Q8K A;  1YW7 A;  4U73 A;  3PKC A;  1XGS A;  2V3Z A;  2G6P A;  2BN7 A;  4U71 A;  2BH3 A;  2BWS A;  4U75 A;  5CDE A;  2OKN A;  4U1B A;  2GU7 A;  2ADU A;  3TB5 A;  3PN9 A;  3IU9 A;  2GZ5 A;  1XGO A;  4IDY A;  4PV4 A;  4B28 A;  1KQ9 A;  1KP0 A;  1XGN A;  1WLR A;  3L7G A;  4FO7 A;  2GA2 A;  5JHU A;  2BB7 A;  4U6C A;  4IKS A;  2BWT A;  1O0X A;  3MX6 A;  4QR8 A;  2GTX A;  4S2T P;  2NQ6 A;  4JUQ A;  3Q6D A;  2GG0 A;  4IPA A;  1CHM A;  4U6Z A;  3FM3 A;  4ZWP A;  1YW9 A;  1YVM A;  1R5H A;  2GG3 A;  3MAT A;  1QXY A;  2NQ7 A;  4IU6 A;  2BWW A;  4FLL A;  2BHB A;  3OOO A;  1B6A A;  3O5V A;  2DFI A;  1KQ0 A;  3MR1 A;  3CTZ A;  3FMQ A;  5FCF A;  4Z7M A;  3OVK A;  3PKE A;  1C22 A;  1C24 A;  1B59 A;  3FMR A;  1WKM A;  4S01 A;  2GG2 A;  1QXZ A;  2EA2 A;  3PKD A;  2Q93 A;  2EVM A;  3BIT A;  4A6W A;  4U76 A;  1WBQ A;  2BWY A;  1XGM A;  3PKA A;  2V3Y A;  2GGB A;  1Y1N A;  2BHD A;  4PNC A;  3RVA A;  2ZSG A; 
#chains in the Genus database with same CATH topology
 3BIP A;  4IF7 A;  3S6B A;  4HXX A;  2P99 A;  4OOK A;  1MAT A;  4MAT A;  4U6E A;  1W2M A;  5D6F A;  1BOA A;  2BHC A;  5CIK A;  2B3K A;  2Q92 A;  1WN1 A;  5FCH A;  4RGZ 1;  2GG7 A;  2BWX A;  5CDV A;  2GG8 A;  5D6E A;  2EVO A;  4EGE A;  1M35 A;  3IU7 A;  2GU4 A;  4U69 A;  4RZZ A;  2P98 A;  1QXW A;  1YJ3 A;  2Q95 A;  5CE6 A;  3BIQ A;  2V6C A;  4FO8 A;  4FUK A;  1WL6 A;  4ZNG A;  4R60 A;  2BWV A;  2EVC A;  2IW2 A;  4IEC A;  5CLS A;  3L24 A;  5E2C A;  1BN5 A;  3D27 A;  4FLI A;  5JFR A;  3IL0 A;  1W7V A;  2GG5 A;  4U70 A;  2GG9 A;  2GGC A;  4ZWO A;  2GU5 A;  1R5G A;  2GU6 A;  3IU8 A;  3ROR A;  5E5B A;  3CB6 A;  1WY2 A;  1N51 A;  3TAV A;  2BWU A;  1C23 A;  3I7M A;  1QZY A;  4FLJ A;  3CB5 A;  4S00 A;  1C21 A;  4FKC A;  1PV9 A;  1C27 A;  2Q96 A;  1XNZ A;  1R58 A;  2Q94 A;  1A16 A;  2EA4 A;  5CDL A;  2B3H A;  5JI6 A;  1JAW A;  4IKT A;  5CNX A;  3PKB A;  4RZY A;  2HOW A;  3PEB A;  3IG4 A;  2V3X A;  2P9A A;  2BHA A;  2OAZ A;  1WL9 A;  4IKU A;  4IKR A;  4U6W A;  1YW8 A;  2B3L A;  4FLK A;  4U6J A;  3QOC A;  2MAT A;  4KM3 A;  4A6V A;  4S2R P;  4ZWU A;  2Q8K A;  1YW7 A;  4U73 A;  3PKC A;  1XGS A;  2V3Z A;  2G6P A;  2BN7 A;  4U71 A;  2BH3 A;  2BWS A;  4U75 A;  5CDE A;  2OKN A;  4U1B A;  2GU7 A;  2ADU A;  3TB5 A;  3PN9 A;  3IU9 A;  2GZ5 A;  1XGO A;  4IDY A;  4PV4 A;  4B28 A;  1KQ9 A;  1KP0 A;  1XGN A;  1WLR A;  3L7G A;  4FO7 A;  2GA2 A;  5JHU A;  2BB7 A;  4U6C A;  4IKS A;  2BWT A;  1O0X A;  3MX6 A;  4QR8 A;  2GTX A;  4S2T P;  2NQ6 A;  4JUQ A;  3Q6D A;  2GG0 A;  4IPA A;  1CHM A;  4U6Z A;  3FM3 A;  4ZWP A;  1YW9 A;  1YVM A;  1R5H A;  2GG3 A;  3MAT A;  1QXY A;  2NQ7 A;  4IU6 A;  2BWW A;  4FLL A;  2BHB A;  3OOO A;  1B6A A;  3O5V A;  2DFI A;  1KQ0 A;  3MR1 A;  3CTZ A;  3FMQ A;  5FCF A;  4Z7M A;  3OVK A;  3PKE A;  1C22 A;  1C24 A;  1B59 A;  3FMR A;  1WKM A;  4S01 A;  2GG2 A;  1QXZ A;  2EA2 A;  3PKD A;  2Q93 A;  2EVM A;  3BIT A;  4A6W A;  4U76 A;  1WBQ A;  2BWY A;  1XGM A;  3PKA A;  2V3Y A;  2GGB A;  1Y1N A;  2BHD A;  4PNC A;  3RVA A;  2ZSG A; 
#chains in the Genus database with same CATH homology
 3BIP A;  4IF7 A;  3S6B A;  4HXX A;  2P99 A;  4OOK A;  1MAT A;  4MAT A;  4U6E A;  1W2M A;  5D6F A;  1BOA A;  2BHC A;  5CIK A;  2B3K A;  2Q92 A;  1WN1 A;  5FCH A;  4RGZ 1;  2GG7 A;  2BWX A;  5CDV A;  2GG8 A;  5D6E A;  2EVO A;  4EGE A;  1M35 A;  3IU7 A;  2GU4 A;  4U69 A;  4RZZ A;  2P98 A;  1QXW A;  1YJ3 A;  2Q95 A;  5CE6 A;  3BIQ A;  2V6C A;  4FO8 A;  4FUK A;  1WL6 A;  4ZNG A;  4R60 A;  2BWV A;  2EVC A;  2IW2 A;  4IEC A;  5CLS A;  3L24 A;  5E2C A;  1BN5 A;  3D27 A;  4FLI A;  5JFR A;  3IL0 A;  1W7V A;  2GG5 A;  4U70 A;  2GG9 A;  2GGC A;  4ZWO A;  2GU5 A;  1R5G A;  2GU6 A;  3IU8 A;  3ROR A;  5E5B A;  3CB6 A;  1WY2 A;  1N51 A;  3TAV A;  2BWU A;  1C23 A;  3I7M A;  1QZY A;  4FLJ A;  3CB5 A;  4S00 A;  1C21 A;  4FKC A;  1PV9 A;  1C27 A;  2Q96 A;  1XNZ A;  1R58 A;  2Q94 A;  1A16 A;  2EA4 A;  5CDL A;  2B3H A;  5JI6 A;  1JAW A;  4IKT A;  5CNX A;  3PKB A;  4RZY A;  2HOW A;  3PEB A;  3IG4 A;  2V3X A;  2P9A A;  2BHA A;  2OAZ A;  1WL9 A;  4IKU A;  4IKR A;  4U6W A;  1YW8 A;  2B3L A;  4FLK A;  4U6J A;  3QOC A;  2MAT A;  4KM3 A;  4A6V A;  4S2R P;  4ZWU A;  2Q8K A;  1YW7 A;  4U73 A;  3PKC A;  1XGS A;  2V3Z A;  2G6P A;  2BN7 A;  4U71 A;  2BH3 A;  2BWS A;  4U75 A;  5CDE A;  2OKN A;  4U1B A;  2GU7 A;  2ADU A;  3TB5 A;  3PN9 A;  3IU9 A;  2GZ5 A;  1XGO A;  4IDY A;  4PV4 A;  4B28 A;  1KQ9 A;  1KP0 A;  1XGN A;  1WLR A;  3L7G A;  4FO7 A;  2GA2 A;  5JHU A;  2BB7 A;  4U6C A;  4IKS A;  2BWT A;  1O0X A;  3MX6 A;  4QR8 A;  2GTX A;  4S2T P;  2NQ6 A;  4JUQ A;  3Q6D A;  2GG0 A;  4IPA A;  1CHM A;  4U6Z A;  3FM3 A;  4ZWP A;  1YW9 A;  1YVM A;  1R5H A;  2GG3 A;  3MAT A;  1QXY A;  2NQ7 A;  4IU6 A;  2BWW A;  4FLL A;  2BHB A;  3OOO A;  1B6A A;  3O5V A;  2DFI A;  1KQ0 A;  3MR1 A;  3CTZ A;  3FMQ A;  5FCF A;  4Z7M A;  3OVK A;  3PKE A;  1C22 A;  1C24 A;  1B59 A;  3FMR A;  1WKM A;  4S01 A;  2GG2 A;  1QXZ A;  2EA2 A;  3PKD A;  2Q93 A;  2EVM A;  3BIT A;  4A6W A;  4U76 A;  1WBQ A;  2BWY A;  1XGM A;  3PKA A;  2V3Y A;  2GGB A;  1Y1N A;  2BHD A;  4PNC A;  3RVA A;  2ZSG A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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