5CE6A

N-terminal domain of fact complex subunit spt16 from cicer arietinum (chickpea)
Total Genus 149
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
149
sequence length
435
structure length
426
Chain Sequence
SIDLNTFQTRLKAFYSHWDDRRTDLWGSSDAIAVACPPPSRYLKSTALFLWLLGFEFPETIMVFTKKQIHVLCSQKKASILESVKKPARESVGVEIILHVKPKNDDGASSMDAIIRAIRAQSSSTVGHIAREEPEGRLLDLWAEKLKNSKFRLSDVANGFSALFAAKSNEEITYIKRAAYLTGSVMKNFVVTKLENVIDEEKKILHSTLMEETEKVILDPAKVNCKLKADNVDICYPPIFQSGGKFDLRPSAVSNDEALYYDSASVIICAVGARYKSYCSNIARTFLIDADPIQSKAYEVLLKAQEAVIGSLKPGNKLSAAYLAAVSVVEKDAPDMVSCLTKSAGTGIGIEFRESGLNINAKNDQIVKEGMVFNVSLGFQNLHCENSKSKNKVFSLLLADTIIINKDKTDVVTSIGSKALKDVAYS
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure and dynamics of Spt16N-domain of FACT complex from Cicer arietinum.
pubmed doi rcsb
source organism Cicer arietinum
molecule tags Transcription
molecule keywords FACT-Spt16
total genus 149
structure length 426
sequence length 435
ec nomenclature
pdb deposition date 2015-07-06

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF14826 FACT-Spt16_Nlob FACT complex subunit SPT16 N-terminal lobe domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 5ce6A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 5ce6A02
4KM3A 2BWYA 5JFRA 4MATA 4RGZ1 2BHBA 2Q94A 2GGCA 4QR8A 1YVMA 2Q93A 1N51A 2EA2A 5CDLA 3PKAA 4U6CA 4Z7MA 5FCFA 2BWTA 1YW7A 2BH3A 4FLIA 2G6PA 2GU6A 2DFIA 2EVCA 5CLSA 4U69A 2P98A 4U70A 4FO8A 1WY2A 4FKCA 4PV4A 4S00A 2EVMA 4IKTA 4A6VA 4FLLA 2GG9A 4U73A 1YW9A 4IDYA 3BITA 4IKUA 4FUKA 3MX6A 1WLRA 2BWWA 2MATA 2P99A 2GG8A 2GU5A 5JI6A 3TAVA 3PKDA 4U76A 3IG4A 4U6WA 4B28A 2OKNA 1XGOA 4U6JA 2GG3A 2GU7A 4U1BA 4A6WA 2HOWA 1R58A 5D6FA 1QXZA 1Y1NA 4FLKA 2GG7A 4IKSA 3BIQA 2B3LA 2GGBA 3MR1A 2BWXA 4ZWUA 2GG5A 2GU4A 3PEBA 3Q6DA 1XGSA 3FM3A 3FMRA 2BWVA 1C24A 3PKCA 1QXWA 4ZWPA 3FMQA 3L7GA 4U6ZA 3QOCA 1KQ9A 5CIKA 5CE6A 1A16A 3TB5A 5JHUA 1JAWA 1C27A 1YJ3A 4RZZA 1KQ0A 2V6CA 4FO7A 1W7VA 2B3HA 3BIPA 3CB5A 4ZNGA 3IU7A 2Q92A 3IU9A 2GTXA 3PKEA 4IKRA 2Q96A 1WL6A 4S01A 1CHMA 2B3KA 4FLJA 1O0XA 4R60A 4HXXA 5FCHA 3RVAA 3RORA 2BB7A 5D6EA 1WL9A 1R5HA 1C22A 2Q95A 3O5VA 3S6BA 4U71A 1WN1A 2ADUA 2Q8KA 1YW8A 3OOOA 3D27A 5CDEA 1W2MA 3PN9A 2EVOA 2ZSGA 1C23A 5CNXA 1XNZA 4EGEA 3IL0A 2GG0A 4JUQA 4U6EA 4U75A 2BHCA 2V3YA 1MATA 4PNCA 3OVKA 4ZWOA 4S2TP 5E2CA 4IF7A 3CTZA 4IPAA 1M35A 1BOAA 2GA2A 5CDVA 1R5GA 1WKMA 1C21A 2GG2A 1WBQA 1PV9A 1KP0A 4IU6A 2V3ZA 4OOKA 1XGMA 3IU8A 2NQ7A 4IECA 2EA4A 4S2RP 4RZYA 2IW2A 1QZYA 1BN5A 1QXYA 2GZ5A 3L24A 2V3XA 2BHAA 3I7MA 2BN7A 2P9AA 3MATA 2NQ6A 5E5BA 2BHDA 2OAZA 2BWUA 1B6AA 3CB6A 2BWSA 1B59A 1XGNA 3PKBA
chains in the Genus database with same CATH superfamily
4KM3A 2BWYA 5JFRA 4MATA 4RGZ1 2BHBA 2Q94A 2GGCA 4QR8A 1YVMA 2Q93A 1N51A 2EA2A 5CDLA 3PKAA 4U6CA 4Z7MA 5FCFA 2BWTA 1YW7A 2BH3A 4FLIA 2G6PA 2GU6A 2DFIA 2EVCA 5CLSA 4U69A 2P98A 4U70A 4FO8A 1WY2A 4FKCA 4PV4A 4S00A 2EVMA 4IKTA 4A6VA 4FLLA 2GG9A 4U73A 1YW9A 4IDYA 3BITA 4IKUA 4FUKA 3MX6A 1WLRA 2BWWA 2MATA 2P99A 2GG8A 2GU5A 5JI6A 3TAVA 3PKDA 4U76A 3IG4A 4U6WA 4B28A 2OKNA 1XGOA 4U6JA 2GG3A 2GU7A 4U1BA 4A6WA 2HOWA 1R58A 5D6FA 1QXZA 1Y1NA 4FLKA 2GG7A 4IKSA 3BIQA 2B3LA 2GGBA 3MR1A 2BWXA 4ZWUA 2GG5A 2GU4A 3PEBA 3Q6DA 1XGSA 3FM3A 3FMRA 2BWVA 1C24A 3PKCA 1QXWA 4ZWPA 3FMQA 3L7GA 4U6ZA 3QOCA 1KQ9A 5CIKA 5CE6A 1A16A 3TB5A 5JHUA 1JAWA 1C27A 1YJ3A 4RZZA 1KQ0A 2V6CA 4FO7A 1W7VA 2B3HA 3BIPA 3CB5A 4ZNGA 3IU7A 2Q92A 3IU9A 2GTXA 3PKEA 4IKRA 2Q96A 1WL6A 4S01A 1CHMA 2B3KA 4FLJA 1O0XA 4R60A 4HXXA 5FCHA 3RVAA 3RORA 2BB7A 5D6EA 1WL9A 1R5HA 1C22A 2Q95A 3O5VA 3S6BA 4U71A 1WN1A 2ADUA 2Q8KA 1YW8A 3OOOA 3D27A 5CDEA 1W2MA 3PN9A 2EVOA 2ZSGA 1C23A 5CNXA 1XNZA 4EGEA 3IL0A 2GG0A 4JUQA 4U6EA 4U75A 2BHCA 2V3YA 1MATA 4PNCA 3OVKA 4ZWOA 4S2TP 5E2CA 4IF7A 3CTZA 4IPAA 1M35A 1BOAA 2GA2A 5CDVA 1R5GA 1WKMA 1C21A 2GG2A 1WBQA 1PV9A 1KP0A 4IU6A 2V3ZA 4OOKA 1XGMA 3IU8A 2NQ7A 4IECA 2EA4A 4S2RP 4RZYA 2IW2A 1QZYA 1BN5A 1QXYA 2GZ5A 3L24A 2V3XA 2BHAA 3I7MA 2BN7A 2P9AA 3MATA 2NQ6A 5E5BA 2BHDA 2OAZA 2BWUA 1B6AA 3CB6A 2BWSA 1B59A 1XGNA 3PKBA
chains in the Genus database with same CATH topology
4KM3A 2BWYA 5JFRA 4MATA 4RGZ1 2BHBA 2Q94A 2GGCA 4QR8A 1YVMA 2Q93A 1N51A 2EA2A 5CDLA 3PKAA 4U6CA 4Z7MA 5FCFA 2BWTA 1YW7A 2BH3A 4FLIA 2G6PA 2GU6A 2DFIA 2EVCA 5CLSA 4U69A 2P98A 4U70A 4FO8A 1WY2A 4FKCA 4PV4A 4S00A 2EVMA 4IKTA 4A6VA 4FLLA 2GG9A 4U73A 1YW9A 4IDYA 3BITA 4IKUA 4FUKA 3MX6A 1WLRA 2BWWA 2MATA 2P99A 2GG8A 2GU5A 5JI6A 3TAVA 3PKDA 4U76A 3IG4A 4U6WA 4B28A 2OKNA 1XGOA 4U6JA 2GG3A 2GU7A 4U1BA 4A6WA 2HOWA 1R58A 5D6FA 1QXZA 1Y1NA 4FLKA 2GG7A 4IKSA 3BIQA 2B3LA 2GGBA 3MR1A 2BWXA 4ZWUA 2GG5A 2GU4A 3PEBA 3Q6DA 1XGSA 3FM3A 3FMRA 2BWVA 1C24A 3PKCA 1QXWA 4ZWPA 3FMQA 3L7GA 4U6ZA 3QOCA 1KQ9A 5CIKA 5CE6A 1A16A 3TB5A 5JHUA 1JAWA 1C27A 1YJ3A 4RZZA 1KQ0A 2V6CA 4FO7A 1W7VA 2B3HA 3BIPA 3CB5A 4ZNGA 3IU7A 2Q92A 3IU9A 2GTXA 3PKEA 4IKRA 2Q96A 1WL6A 4S01A 1CHMA 2B3KA 4FLJA 1O0XA 4R60A 4HXXA 5FCHA 3RVAA 3RORA 2BB7A 5D6EA 1WL9A 1R5HA 1C22A 2Q95A 3O5VA 3S6BA 4U71A 1WN1A 2ADUA 2Q8KA 1YW8A 3OOOA 3D27A 5CDEA 1W2MA 3PN9A 2EVOA 2ZSGA 1C23A 5CNXA 1XNZA 4EGEA 3IL0A 2GG0A 4JUQA 4U6EA 4U75A 2BHCA 2V3YA 1MATA 4PNCA 3OVKA 4ZWOA 4S2TP 5E2CA 4IF7A 3CTZA 4IPAA 1M35A 1BOAA 2GA2A 5CDVA 1R5GA 1WKMA 1C21A 2GG2A 1WBQA 1PV9A 1KP0A 4IU6A 2V3ZA 4OOKA 1XGMA 3IU8A 2NQ7A 4IECA 2EA4A 4S2RP 4RZYA 2IW2A 1QZYA 1BN5A 1QXYA 2GZ5A 3L24A 2V3XA 2BHAA 3I7MA 2BN7A 2P9AA 3MATA 2NQ6A 5E5BA 2BHDA 2OAZA 2BWUA 1B6AA 3CB6A 2BWSA 1B59A 1XGNA 3PKBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KM3 A;  2BWY A;  5JFR A;  4MAT A;  4RGZ 1;  2BHB A;  2Q94 A;  2GGC A;  4QR8 A;  1YVM A;  2Q93 A;  1N51 A;  2EA2 A;  5CDL A;  3PKA A;  4U6C A;  4Z7M A;  5FCF A;  2BWT A;  1YW7 A;  2BH3 A;  4FLI A;  2G6P A;  2GU6 A;  2DFI A;  2EVC A;  5CLS A;  4U69 A;  2P98 A;  4U70 A;  4FO8 A;  1WY2 A;  4FKC A;  4PV4 A;  4S00 A;  2EVM A;  4IKT A;  4A6V A;  4FLL A;  2GG9 A;  4U73 A;  1YW9 A;  4IDY A;  3BIT A;  4IKU A;  4FUK A;  3MX6 A;  1WLR A;  2BWW A;  2MAT A;  2P99 A;  2GG8 A;  2GU5 A;  5JI6 A;  3TAV A;  3PKD A;  4U76 A;  3IG4 A;  4U6W A;  4B28 A;  2OKN A;  1XGO A;  4U6J A;  2GG3 A;  2GU7 A;  4U1B A;  4A6W A;  2HOW A;  1R58 A;  5D6F A;  1QXZ A;  1Y1N A;  4FLK A;  2GG7 A;  4IKS A;  3BIQ A;  2B3L A;  2GGB A;  3MR1 A;  2BWX A;  4ZWU A;  2GG5 A;  2GU4 A;  3PEB A;  3Q6D A;  1XGS A;  3FM3 A;  3FMR A;  2BWV A;  1C24 A;  3PKC A;  1QXW A;  4ZWP A;  3FMQ A;  3L7G A;  4U6Z A;  3QOC A;  1KQ9 A;  5CIK A;  5CE6 A;  1A16 A;  3TB5 A;  5JHU A;  1JAW A;  1C27 A;  1YJ3 A;  4RZZ A;  1KQ0 A;  2V6C A;  4FO7 A;  1W7V A;  2B3H A;  3BIP A;  3CB5 A;  4ZNG A;  3IU7 A;  2Q92 A;  3IU9 A;  2GTX A;  3PKE A;  4IKR A;  2Q96 A;  1WL6 A;  4S01 A;  1CHM A;  2B3K A;  4FLJ A;  1O0X A;  4R60 A;  4HXX A;  5FCH A;  3RVA A;  3ROR A;  2BB7 A;  5D6E A;  1WL9 A;  1R5H A;  1C22 A;  2Q95 A;  3O5V A;  3S6B A;  4U71 A;  1WN1 A;  2ADU A;  2Q8K A;  1YW8 A;  3OOO A;  3D27 A;  5CDE A;  1W2M A;  3PN9 A;  2EVO A;  2ZSG A;  1C23 A;  5CNX A;  1XNZ A;  4EGE A;  3IL0 A;  2GG0 A;  4JUQ A;  4U6E A;  4U75 A;  2BHC A;  2V3Y A;  1MAT A;  4PNC A;  3OVK A;  4ZWO A;  4S2T P;  5E2C A;  4IF7 A;  3CTZ A;  4IPA A;  1M35 A;  1BOA A;  2GA2 A;  5CDV A;  1R5G A;  1WKM A;  1C21 A;  2GG2 A;  1WBQ A;  1PV9 A;  1KP0 A;  4IU6 A;  2V3Z A;  4OOK A;  1XGM A;  3IU8 A;  2NQ7 A;  4IEC A;  2EA4 A;  4S2R P;  4RZY A;  2IW2 A;  1QZY A;  1BN5 A;  1QXY A;  2GZ5 A;  3L24 A;  2V3X A;  2BHA A;  3I7M A;  2BN7 A;  2P9A A;  3MAT A;  2NQ6 A;  5E5B A;  2BHD A;  2OAZ A;  2BWU A;  1B6A A;  3CB6 A;  2BWS A;  1B59 A;  1XGN A;  3PKB A; 
#chains in the Genus database with same CATH topology
 4KM3 A;  2BWY A;  5JFR A;  4MAT A;  4RGZ 1;  2BHB A;  2Q94 A;  2GGC A;  4QR8 A;  1YVM A;  2Q93 A;  1N51 A;  2EA2 A;  5CDL A;  3PKA A;  4U6C A;  4Z7M A;  5FCF A;  2BWT A;  1YW7 A;  2BH3 A;  4FLI A;  2G6P A;  2GU6 A;  2DFI A;  2EVC A;  5CLS A;  4U69 A;  2P98 A;  4U70 A;  4FO8 A;  1WY2 A;  4FKC A;  4PV4 A;  4S00 A;  2EVM A;  4IKT A;  4A6V A;  4FLL A;  2GG9 A;  4U73 A;  1YW9 A;  4IDY A;  3BIT A;  4IKU A;  4FUK A;  3MX6 A;  1WLR A;  2BWW A;  2MAT A;  2P99 A;  2GG8 A;  2GU5 A;  5JI6 A;  3TAV A;  3PKD A;  4U76 A;  3IG4 A;  4U6W A;  4B28 A;  2OKN A;  1XGO A;  4U6J A;  2GG3 A;  2GU7 A;  4U1B A;  4A6W A;  2HOW A;  1R58 A;  5D6F A;  1QXZ A;  1Y1N A;  4FLK A;  2GG7 A;  4IKS A;  3BIQ A;  2B3L A;  2GGB A;  3MR1 A;  2BWX A;  4ZWU A;  2GG5 A;  2GU4 A;  3PEB A;  3Q6D A;  1XGS A;  3FM3 A;  3FMR A;  2BWV A;  1C24 A;  3PKC A;  1QXW A;  4ZWP A;  3FMQ A;  3L7G A;  4U6Z A;  3QOC A;  1KQ9 A;  5CIK A;  5CE6 A;  1A16 A;  3TB5 A;  5JHU A;  1JAW A;  1C27 A;  1YJ3 A;  4RZZ A;  1KQ0 A;  2V6C A;  4FO7 A;  1W7V A;  2B3H A;  3BIP A;  3CB5 A;  4ZNG A;  3IU7 A;  2Q92 A;  3IU9 A;  2GTX A;  3PKE A;  4IKR A;  2Q96 A;  1WL6 A;  4S01 A;  1CHM A;  2B3K A;  4FLJ A;  1O0X A;  4R60 A;  4HXX A;  5FCH A;  3RVA A;  3ROR A;  2BB7 A;  5D6E A;  1WL9 A;  1R5H A;  1C22 A;  2Q95 A;  3O5V A;  3S6B A;  4U71 A;  1WN1 A;  2ADU A;  2Q8K A;  1YW8 A;  3OOO A;  3D27 A;  5CDE A;  1W2M A;  3PN9 A;  2EVO A;  2ZSG A;  1C23 A;  5CNX A;  1XNZ A;  4EGE A;  3IL0 A;  2GG0 A;  4JUQ A;  4U6E A;  4U75 A;  2BHC A;  2V3Y A;  1MAT A;  4PNC A;  3OVK A;  4ZWO A;  4S2T P;  5E2C A;  4IF7 A;  3CTZ A;  4IPA A;  1M35 A;  1BOA A;  2GA2 A;  5CDV A;  1R5G A;  1WKM A;  1C21 A;  2GG2 A;  1WBQ A;  1PV9 A;  1KP0 A;  4IU6 A;  2V3Z A;  4OOK A;  1XGM A;  3IU8 A;  2NQ7 A;  4IEC A;  2EA4 A;  4S2R P;  4RZY A;  2IW2 A;  1QZY A;  1BN5 A;  1QXY A;  2GZ5 A;  3L24 A;  2V3X A;  2BHA A;  3I7M A;  2BN7 A;  2P9A A;  3MAT A;  2NQ6 A;  5E5B A;  2BHD A;  2OAZ A;  2BWU A;  1B6A A;  3CB6 A;  2BWS A;  1B59 A;  1XGN A;  3PKB A; 
#chains in the Genus database with same CATH homology
 4KM3 A;  2BWY A;  5JFR A;  4MAT A;  4RGZ 1;  2BHB A;  2Q94 A;  2GGC A;  4QR8 A;  1YVM A;  2Q93 A;  1N51 A;  2EA2 A;  5CDL A;  3PKA A;  4U6C A;  4Z7M A;  5FCF A;  2BWT A;  1YW7 A;  2BH3 A;  4FLI A;  2G6P A;  2GU6 A;  2DFI A;  2EVC A;  5CLS A;  4U69 A;  2P98 A;  4U70 A;  4FO8 A;  1WY2 A;  4FKC A;  4PV4 A;  4S00 A;  2EVM A;  4IKT A;  4A6V A;  4FLL A;  2GG9 A;  4U73 A;  1YW9 A;  4IDY A;  3BIT A;  4IKU A;  4FUK A;  3MX6 A;  1WLR A;  2BWW A;  2MAT A;  2P99 A;  2GG8 A;  2GU5 A;  5JI6 A;  3TAV A;  3PKD A;  4U76 A;  3IG4 A;  4U6W A;  4B28 A;  2OKN A;  1XGO A;  4U6J A;  2GG3 A;  2GU7 A;  4U1B A;  4A6W A;  2HOW A;  1R58 A;  5D6F A;  1QXZ A;  1Y1N A;  4FLK A;  2GG7 A;  4IKS A;  3BIQ A;  2B3L A;  2GGB A;  3MR1 A;  2BWX A;  4ZWU A;  2GG5 A;  2GU4 A;  3PEB A;  3Q6D A;  1XGS A;  3FM3 A;  3FMR A;  2BWV A;  1C24 A;  3PKC A;  1QXW A;  4ZWP A;  3FMQ A;  3L7G A;  4U6Z A;  3QOC A;  1KQ9 A;  5CIK A;  5CE6 A;  1A16 A;  3TB5 A;  5JHU A;  1JAW A;  1C27 A;  1YJ3 A;  4RZZ A;  1KQ0 A;  2V6C A;  4FO7 A;  1W7V A;  2B3H A;  3BIP A;  3CB5 A;  4ZNG A;  3IU7 A;  2Q92 A;  3IU9 A;  2GTX A;  3PKE A;  4IKR A;  2Q96 A;  1WL6 A;  4S01 A;  1CHM A;  2B3K A;  4FLJ A;  1O0X A;  4R60 A;  4HXX A;  5FCH A;  3RVA A;  3ROR A;  2BB7 A;  5D6E A;  1WL9 A;  1R5H A;  1C22 A;  2Q95 A;  3O5V A;  3S6B A;  4U71 A;  1WN1 A;  2ADU A;  2Q8K A;  1YW8 A;  3OOO A;  3D27 A;  5CDE A;  1W2M A;  3PN9 A;  2EVO A;  2ZSG A;  1C23 A;  5CNX A;  1XNZ A;  4EGE A;  3IL0 A;  2GG0 A;  4JUQ A;  4U6E A;  4U75 A;  2BHC A;  2V3Y A;  1MAT A;  4PNC A;  3OVK A;  4ZWO A;  4S2T P;  5E2C A;  4IF7 A;  3CTZ A;  4IPA A;  1M35 A;  1BOA A;  2GA2 A;  5CDV A;  1R5G A;  1WKM A;  1C21 A;  2GG2 A;  1WBQ A;  1PV9 A;  1KP0 A;  4IU6 A;  2V3Z A;  4OOK A;  1XGM A;  3IU8 A;  2NQ7 A;  4IEC A;  2EA4 A;  4S2R P;  4RZY A;  2IW2 A;  1QZY A;  1BN5 A;  1QXY A;  2GZ5 A;  3L24 A;  2V3X A;  2BHA A;  3I7M A;  2BN7 A;  2P9A A;  3MAT A;  2NQ6 A;  5E5B A;  2BHD A;  2OAZ A;  2BWU A;  1B6A A;  3CB6 A;  2BWS A;  1B59 A;  1XGN A;  3PKB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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