2ZSGA

Crystal structure of x-pro aminopeptidase from thermotoga maritima msb8
Total Genus 124
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
124
sequence length
359
structure length
356
Chain Sequence
b'MDRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSFSIILISENTRLLITDSRYTVQAKQETDFEVREVDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEGVAFDTIVASGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFGHSLGHGIGLEVHEGPAISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQGCEILTTLPRSIFVV'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Aminopeptidase P, putative
publication title Crystal structure of X-Pro aminopeptidase from Thermotoga maritima MSB8
rcsb
source organism Thermotoga maritima
molecule tags Hydrolase
total genus 124
structure length 356
sequence length 359
chains with identical sequence B
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2008-09-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 2zsgA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 2zsgA02
4U69A 2GGCA 2GG3A 3D27A 2Q94A 4IKUA 1R5HA 1CHMA 4ZWPA 4Z7MA 4U70A 1KP0A 2BWXA 1C23A 2OKNA 4IECA 3OVKA 4S2TP 2DFIA 3CTZA 3L24A 2Q95A 5JHUA 2GG2A 2GG0A 2BWSA 1C24A 2ADUA 2V6CA 3IU8A 3IU9A 4U1BA 1M35A 2GG7A 1W7VA 4IU6A 4R60A 5D6FA 3CB6A 5E5BA 4A6VA 1O0XA 2Q92A 3BIPA 2BHAA 3PKEA 2GU5A 2EVOA 3TB5A 2BWYA 3PN9A 1Y1NA 4IPAA 3MX6A 3O5VA 1WBQA 4QR8A 2EVCA 2BH3A 2Q93A 2V3ZA 2P9AA 4PNCA 2GU6A 2HOWA 5CIKA 3TAVA 4S2RP 3FMRA 1N51A 2BHBA 4RGZ1 1R58A 5CE6A 3PKDA 4IKRA 4FLKA 4ZNGA 3CB5A 4FO8A 3IL0A 5JI6A 1JAWA 2EA4A 5FCHA 2EVMA 4MATA 1YW8A 3L7GA 2NQ6A 2OAZA 5D6EA 3RORA 1YVMA 3FM3A 4EGEA 4U6WA 4PV4A 2GG9A 4HXXA 2MATA 4A6WA 4S01A 2Q96A 1WN1A 2GG5A 1XGMA 4FLLA 4IKTA 2P98A 4KM3A 4U75A 4RZZA 1KQ0A 1MATA 3Q6DA 5JFRA 3PKAA 2V3XA 4ZWOA 1XNZA 1XGNA 2GG8A 1QZYA 2IW2A 2GU7A 2NQ7A 2Q8KA 1PV9A 3QOCA 1WKMA 2BHCA 3BITA 4U6ZA 4S00A 1C27A 4JUQA 4RZYA 1W2MA 3IU7A 5CNXA 2B3KA 3PKCA 1XGSA 4B28A 2GTXA 3BIQA 4FO7A 1QXYA 2EA2A 5CDEA 1YW9A 4IF7A 1WL6A 1C22A 4U73A 2B3HA 1BOAA 3IG4A 2BWTA 5CLSA 2GGBA 2BWWA 4FLJA 3I7MA 1WL9A 2BN7A 1QXWA 1YJ3A 3MR1A 2P99A 3S6BA 4U6EA 5CDVA 4ZWUA 1BN5A 1KQ9A 5FCFA 2GZ5A 2BB7A 1B6AA 2BWUA 4FUKA 4U6JA 2GU4A 4U76A 1WY2A 3PEBA 4FKCA 1R5GA 2BWVA 4IDYA 4IKSA 1B59A 4OOKA 2B3LA 2V3YA 5CDLA 3FMQA 2ZSGA 3PKBA 3RVAA 1C21A 1QXZA 4U6CA 5E2CA 1YW7A 4U71A 3OOOA 2BHDA 1A16A 4FLIA 3MATA 1WLRA 1XGOA 2G6PA 2GA2A
chains in the Genus database with same CATH superfamily
4U69A 2GGCA 2GG3A 3D27A 2Q94A 4IKUA 1R5HA 1CHMA 4ZWPA 4Z7MA 4U70A 1KP0A 2BWXA 1C23A 2OKNA 4IECA 3OVKA 4S2TP 2DFIA 3CTZA 3L24A 2Q95A 5JHUA 2GG2A 2GG0A 2BWSA 1C24A 2ADUA 2V6CA 3IU8A 3IU9A 4U1BA 1M35A 2GG7A 1W7VA 4IU6A 4R60A 5D6FA 3CB6A 5E5BA 4A6VA 1O0XA 2Q92A 3BIPA 2BHAA 3PKEA 2GU5A 2EVOA 3TB5A 2BWYA 3PN9A 1Y1NA 4IPAA 3MX6A 3O5VA 1WBQA 4QR8A 2EVCA 2BH3A 2Q93A 2V3ZA 2P9AA 4PNCA 2GU6A 2HOWA 5CIKA 3TAVA 4S2RP 3FMRA 1N51A 2BHBA 4RGZ1 1R58A 5CE6A 3PKDA 4IKRA 4FLKA 4ZNGA 3CB5A 4FO8A 3IL0A 5JI6A 1JAWA 2EA4A 5FCHA 2EVMA 4MATA 1YW8A 3L7GA 2NQ6A 2OAZA 5D6EA 3RORA 1YVMA 3FM3A 4EGEA 4U6WA 4PV4A 2GG9A 4HXXA 2MATA 4A6WA 4S01A 2Q96A 1WN1A 2GG5A 1XGMA 4FLLA 4IKTA 2P98A 4KM3A 4U75A 4RZZA 1KQ0A 1MATA 3Q6DA 5JFRA 3PKAA 2V3XA 4ZWOA 1XNZA 1XGNA 2GG8A 1QZYA 2IW2A 2GU7A 2NQ7A 2Q8KA 1PV9A 3QOCA 1WKMA 2BHCA 3BITA 4U6ZA 4S00A 1C27A 4JUQA 4RZYA 1W2MA 3IU7A 5CNXA 2B3KA 3PKCA 1XGSA 4B28A 2GTXA 3BIQA 4FO7A 1QXYA 2EA2A 5CDEA 1YW9A 4IF7A 1WL6A 1C22A 4U73A 2B3HA 1BOAA 3IG4A 2BWTA 5CLSA 2GGBA 2BWWA 4FLJA 3I7MA 1WL9A 2BN7A 1QXWA 1YJ3A 3MR1A 2P99A 3S6BA 4U6EA 5CDVA 4ZWUA 1BN5A 1KQ9A 5FCFA 2GZ5A 2BB7A 1B6AA 2BWUA 4FUKA 4U6JA 2GU4A 4U76A 1WY2A 3PEBA 4FKCA 1R5GA 2BWVA 4IDYA 4IKSA 1B59A 4OOKA 2B3LA 2V3YA 5CDLA 3FMQA 2ZSGA 3PKBA 3RVAA 1C21A 1QXZA 4U6CA 5E2CA 1YW7A 4U71A 3OOOA 2BHDA 1A16A 4FLIA 3MATA 1WLRA 1XGOA 2G6PA 2GA2A
chains in the Genus database with same CATH topology
4U69A 2GGCA 2GG3A 3D27A 2Q94A 4IKUA 1R5HA 1CHMA 4ZWPA 4Z7MA 4U70A 1KP0A 2BWXA 1C23A 2OKNA 4IECA 3OVKA 4S2TP 2DFIA 3CTZA 3L24A 2Q95A 5JHUA 2GG2A 2GG0A 2BWSA 1C24A 2ADUA 2V6CA 3IU8A 3IU9A 4U1BA 1M35A 2GG7A 1W7VA 4IU6A 4R60A 5D6FA 3CB6A 5E5BA 4A6VA 1O0XA 2Q92A 3BIPA 2BHAA 3PKEA 2GU5A 2EVOA 3TB5A 2BWYA 3PN9A 1Y1NA 4IPAA 3MX6A 3O5VA 1WBQA 4QR8A 2EVCA 2BH3A 2Q93A 2V3ZA 2P9AA 4PNCA 2GU6A 2HOWA 5CIKA 3TAVA 4S2RP 3FMRA 1N51A 2BHBA 4RGZ1 1R58A 5CE6A 3PKDA 4IKRA 4FLKA 4ZNGA 3CB5A 4FO8A 3IL0A 5JI6A 1JAWA 2EA4A 5FCHA 2EVMA 4MATA 1YW8A 3L7GA 2NQ6A 2OAZA 5D6EA 3RORA 1YVMA 3FM3A 4EGEA 4U6WA 4PV4A 2GG9A 4HXXA 2MATA 4A6WA 4S01A 2Q96A 1WN1A 2GG5A 1XGMA 4FLLA 4IKTA 2P98A 4KM3A 4U75A 4RZZA 1KQ0A 1MATA 3Q6DA 5JFRA 3PKAA 2V3XA 4ZWOA 1XNZA 1XGNA 2GG8A 1QZYA 2IW2A 2GU7A 2NQ7A 2Q8KA 1PV9A 3QOCA 1WKMA 2BHCA 3BITA 4U6ZA 4S00A 1C27A 4JUQA 4RZYA 1W2MA 3IU7A 5CNXA 2B3KA 3PKCA 1XGSA 4B28A 2GTXA 3BIQA 4FO7A 1QXYA 2EA2A 5CDEA 1YW9A 4IF7A 1WL6A 1C22A 4U73A 2B3HA 1BOAA 3IG4A 2BWTA 5CLSA 2GGBA 2BWWA 4FLJA 3I7MA 1WL9A 2BN7A 1QXWA 1YJ3A 3MR1A 2P99A 3S6BA 4U6EA 5CDVA 4ZWUA 1BN5A 1KQ9A 5FCFA 2GZ5A 2BB7A 1B6AA 2BWUA 4FUKA 4U6JA 2GU4A 4U76A 1WY2A 3PEBA 4FKCA 1R5GA 2BWVA 4IDYA 4IKSA 1B59A 4OOKA 2B3LA 2V3YA 5CDLA 3FMQA 2ZSGA 3PKBA 3RVAA 1C21A 1QXZA 4U6CA 5E2CA 1YW7A 4U71A 3OOOA 2BHDA 1A16A 4FLIA 3MATA 1WLRA 1XGOA 2G6PA 2GA2A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4U69 A;  2GGC A;  2GG3 A;  3D27 A;  2Q94 A;  4IKU A;  1R5H A;  1CHM A;  4ZWP A;  4Z7M A;  4U70 A;  1KP0 A;  2BWX A;  1C23 A;  2OKN A;  4IEC A;  3OVK A;  4S2T P;  2DFI A;  3CTZ A;  3L24 A;  2Q95 A;  5JHU A;  2GG2 A;  2GG0 A;  2BWS A;  1C24 A;  2ADU A;  2V6C A;  3IU8 A;  3IU9 A;  4U1B A;  1M35 A;  2GG7 A;  1W7V A;  4IU6 A;  4R60 A;  5D6F A;  3CB6 A;  5E5B A;  4A6V A;  1O0X A;  2Q92 A;  3BIP A;  2BHA A;  3PKE A;  2GU5 A;  2EVO A;  3TB5 A;  2BWY A;  3PN9 A;  1Y1N A;  4IPA A;  3MX6 A;  3O5V A;  1WBQ A;  4QR8 A;  2EVC A;  2BH3 A;  2Q93 A;  2V3Z A;  2P9A A;  4PNC A;  2GU6 A;  2HOW A;  5CIK A;  3TAV A;  4S2R P;  3FMR A;  1N51 A;  2BHB A;  4RGZ 1;  1R58 A;  5CE6 A;  3PKD A;  4IKR A;  4FLK A;  4ZNG A;  3CB5 A;  4FO8 A;  3IL0 A;  5JI6 A;  1JAW A;  2EA4 A;  5FCH A;  2EVM A;  4MAT A;  1YW8 A;  3L7G A;  2NQ6 A;  2OAZ A;  5D6E A;  3ROR A;  1YVM A;  3FM3 A;  4EGE A;  4U6W A;  4PV4 A;  2GG9 A;  4HXX A;  2MAT A;  4A6W A;  4S01 A;  2Q96 A;  1WN1 A;  2GG5 A;  1XGM A;  4FLL A;  4IKT A;  2P98 A;  4KM3 A;  4U75 A;  4RZZ A;  1KQ0 A;  1MAT A;  3Q6D A;  5JFR A;  3PKA A;  2V3X A;  4ZWO A;  1XNZ A;  1XGN A;  2GG8 A;  1QZY A;  2IW2 A;  2GU7 A;  2NQ7 A;  2Q8K A;  1PV9 A;  3QOC A;  1WKM A;  2BHC A;  3BIT A;  4U6Z A;  4S00 A;  1C27 A;  4JUQ A;  4RZY A;  1W2M A;  3IU7 A;  5CNX A;  2B3K A;  3PKC A;  1XGS A;  4B28 A;  2GTX A;  3BIQ A;  4FO7 A;  1QXY A;  2EA2 A;  5CDE A;  1YW9 A;  4IF7 A;  1WL6 A;  1C22 A;  4U73 A;  2B3H A;  1BOA A;  3IG4 A;  2BWT A;  5CLS A;  2GGB A;  2BWW A;  4FLJ A;  3I7M A;  1WL9 A;  2BN7 A;  1QXW A;  1YJ3 A;  3MR1 A;  2P99 A;  3S6B A;  4U6E A;  5CDV A;  4ZWU A;  1BN5 A;  1KQ9 A;  5FCF A;  2GZ5 A;  2BB7 A;  1B6A A;  2BWU A;  4FUK A;  4U6J A;  2GU4 A;  4U76 A;  1WY2 A;  3PEB A;  4FKC A;  1R5G A;  2BWV A;  4IDY A;  4IKS A;  1B59 A;  4OOK A;  2B3L A;  2V3Y A;  5CDL A;  3FMQ A;  2ZSG A;  3PKB A;  3RVA A;  1C21 A;  1QXZ A;  4U6C A;  5E2C A;  1YW7 A;  4U71 A;  3OOO A;  2BHD A;  1A16 A;  4FLI A;  3MAT A;  1WLR A;  1XGO A;  2G6P A;  2GA2 A; 
#chains in the Genus database with same CATH topology
 4U69 A;  2GGC A;  2GG3 A;  3D27 A;  2Q94 A;  4IKU A;  1R5H A;  1CHM A;  4ZWP A;  4Z7M A;  4U70 A;  1KP0 A;  2BWX A;  1C23 A;  2OKN A;  4IEC A;  3OVK A;  4S2T P;  2DFI A;  3CTZ A;  3L24 A;  2Q95 A;  5JHU A;  2GG2 A;  2GG0 A;  2BWS A;  1C24 A;  2ADU A;  2V6C A;  3IU8 A;  3IU9 A;  4U1B A;  1M35 A;  2GG7 A;  1W7V A;  4IU6 A;  4R60 A;  5D6F A;  3CB6 A;  5E5B A;  4A6V A;  1O0X A;  2Q92 A;  3BIP A;  2BHA A;  3PKE A;  2GU5 A;  2EVO A;  3TB5 A;  2BWY A;  3PN9 A;  1Y1N A;  4IPA A;  3MX6 A;  3O5V A;  1WBQ A;  4QR8 A;  2EVC A;  2BH3 A;  2Q93 A;  2V3Z A;  2P9A A;  4PNC A;  2GU6 A;  2HOW A;  5CIK A;  3TAV A;  4S2R P;  3FMR A;  1N51 A;  2BHB A;  4RGZ 1;  1R58 A;  5CE6 A;  3PKD A;  4IKR A;  4FLK A;  4ZNG A;  3CB5 A;  4FO8 A;  3IL0 A;  5JI6 A;  1JAW A;  2EA4 A;  5FCH A;  2EVM A;  4MAT A;  1YW8 A;  3L7G A;  2NQ6 A;  2OAZ A;  5D6E A;  3ROR A;  1YVM A;  3FM3 A;  4EGE A;  4U6W A;  4PV4 A;  2GG9 A;  4HXX A;  2MAT A;  4A6W A;  4S01 A;  2Q96 A;  1WN1 A;  2GG5 A;  1XGM A;  4FLL A;  4IKT A;  2P98 A;  4KM3 A;  4U75 A;  4RZZ A;  1KQ0 A;  1MAT A;  3Q6D A;  5JFR A;  3PKA A;  2V3X A;  4ZWO A;  1XNZ A;  1XGN A;  2GG8 A;  1QZY A;  2IW2 A;  2GU7 A;  2NQ7 A;  2Q8K A;  1PV9 A;  3QOC A;  1WKM A;  2BHC A;  3BIT A;  4U6Z A;  4S00 A;  1C27 A;  4JUQ A;  4RZY A;  1W2M A;  3IU7 A;  5CNX A;  2B3K A;  3PKC A;  1XGS A;  4B28 A;  2GTX A;  3BIQ A;  4FO7 A;  1QXY A;  2EA2 A;  5CDE A;  1YW9 A;  4IF7 A;  1WL6 A;  1C22 A;  4U73 A;  2B3H A;  1BOA A;  3IG4 A;  2BWT A;  5CLS A;  2GGB A;  2BWW A;  4FLJ A;  3I7M A;  1WL9 A;  2BN7 A;  1QXW A;  1YJ3 A;  3MR1 A;  2P99 A;  3S6B A;  4U6E A;  5CDV A;  4ZWU A;  1BN5 A;  1KQ9 A;  5FCF A;  2GZ5 A;  2BB7 A;  1B6A A;  2BWU A;  4FUK A;  4U6J A;  2GU4 A;  4U76 A;  1WY2 A;  3PEB A;  4FKC A;  1R5G A;  2BWV A;  4IDY A;  4IKS A;  1B59 A;  4OOK A;  2B3L A;  2V3Y A;  5CDL A;  3FMQ A;  2ZSG A;  3PKB A;  3RVA A;  1C21 A;  1QXZ A;  4U6C A;  5E2C A;  1YW7 A;  4U71 A;  3OOO A;  2BHD A;  1A16 A;  4FLI A;  3MAT A;  1WLR A;  1XGO A;  2G6P A;  2GA2 A; 
#chains in the Genus database with same CATH homology
 4U69 A;  2GGC A;  2GG3 A;  3D27 A;  2Q94 A;  4IKU A;  1R5H A;  1CHM A;  4ZWP A;  4Z7M A;  4U70 A;  1KP0 A;  2BWX A;  1C23 A;  2OKN A;  4IEC A;  3OVK A;  4S2T P;  2DFI A;  3CTZ A;  3L24 A;  2Q95 A;  5JHU A;  2GG2 A;  2GG0 A;  2BWS A;  1C24 A;  2ADU A;  2V6C A;  3IU8 A;  3IU9 A;  4U1B A;  1M35 A;  2GG7 A;  1W7V A;  4IU6 A;  4R60 A;  5D6F A;  3CB6 A;  5E5B A;  4A6V A;  1O0X A;  2Q92 A;  3BIP A;  2BHA A;  3PKE A;  2GU5 A;  2EVO A;  3TB5 A;  2BWY A;  3PN9 A;  1Y1N A;  4IPA A;  3MX6 A;  3O5V A;  1WBQ A;  4QR8 A;  2EVC A;  2BH3 A;  2Q93 A;  2V3Z A;  2P9A A;  4PNC A;  2GU6 A;  2HOW A;  5CIK A;  3TAV A;  4S2R P;  3FMR A;  1N51 A;  2BHB A;  4RGZ 1;  1R58 A;  5CE6 A;  3PKD A;  4IKR A;  4FLK A;  4ZNG A;  3CB5 A;  4FO8 A;  3IL0 A;  5JI6 A;  1JAW A;  2EA4 A;  5FCH A;  2EVM A;  4MAT A;  1YW8 A;  3L7G A;  2NQ6 A;  2OAZ A;  5D6E A;  3ROR A;  1YVM A;  3FM3 A;  4EGE A;  4U6W A;  4PV4 A;  2GG9 A;  4HXX A;  2MAT A;  4A6W A;  4S01 A;  2Q96 A;  1WN1 A;  2GG5 A;  1XGM A;  4FLL A;  4IKT A;  2P98 A;  4KM3 A;  4U75 A;  4RZZ A;  1KQ0 A;  1MAT A;  3Q6D A;  5JFR A;  3PKA A;  2V3X A;  4ZWO A;  1XNZ A;  1XGN A;  2GG8 A;  1QZY A;  2IW2 A;  2GU7 A;  2NQ7 A;  2Q8K A;  1PV9 A;  3QOC A;  1WKM A;  2BHC A;  3BIT A;  4U6Z A;  4S00 A;  1C27 A;  4JUQ A;  4RZY A;  1W2M A;  3IU7 A;  5CNX A;  2B3K A;  3PKC A;  1XGS A;  4B28 A;  2GTX A;  3BIQ A;  4FO7 A;  1QXY A;  2EA2 A;  5CDE A;  1YW9 A;  4IF7 A;  1WL6 A;  1C22 A;  4U73 A;  2B3H A;  1BOA A;  3IG4 A;  2BWT A;  5CLS A;  2GGB A;  2BWW A;  4FLJ A;  3I7M A;  1WL9 A;  2BN7 A;  1QXW A;  1YJ3 A;  3MR1 A;  2P99 A;  3S6B A;  4U6E A;  5CDV A;  4ZWU A;  1BN5 A;  1KQ9 A;  5FCF A;  2GZ5 A;  2BB7 A;  1B6A A;  2BWU A;  4FUK A;  4U6J A;  2GU4 A;  4U76 A;  1WY2 A;  3PEB A;  4FKC A;  1R5G A;  2BWV A;  4IDY A;  4IKS A;  1B59 A;  4OOK A;  2B3L A;  2V3Y A;  5CDL A;  3FMQ A;  2ZSG A;  3PKB A;  3RVA A;  1C21 A;  1QXZ A;  4U6C A;  5E2C A;  1YW7 A;  4U71 A;  3OOO A;  2BHD A;  1A16 A;  4FLI A;  3MAT A;  1WLR A;  1XGO A;  2G6P A;  2GA2 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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