2ZSGA

Crystal structure of x-pro aminopeptidase from thermotoga maritima msb8
Total Genus 124
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
124
sequence length
359
structure length
356
Chain Sequence
MDRSERLIQLISEEGIDAFLIMNIENSARASSVYFSGFTGSFSIILISENTRLLITDSRYTVQAKQETDFEVREVDFIDVLKKTVNDLKIKTIALEEERVSLSLFRRISSAFGDRKFIGIDDEVKQMRMVKDEGEIEKIKQAIEISERAFLETVQQIRAGMTEKEIAALLEYTMRKEGAEGVAFDTIVASGCRSALPHGKASDKVVERGDVIVIDFGATYENYCADITRVVSIGEPSDEVKEVHSIVLEAQERALKIAKAGVTGKLLDSVAREFIREKGYGEFFGHSLGHGIGLEVHEGPAISFRNDSPLPENVVFTVEPGIYLEGKFGIRIEEDVVLKEQGCEILTTLPRSIFVV
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of X-Pro aminopeptidase from Thermotoga maritima MSB8
rcsb
source organism Thermotoga maritima
molecule tags Hydrolase
molecule keywords Aminopeptidase P, putative
total genus 124
structure length 356
sequence length 359
chains with identical sequence B
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2008-09-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 2zsgA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 2zsgA02
3BIPA 1QXYA 2Q94A 3TAVA 1WL9A 5D6FA 1B59A 5CDLA 2GU6A 4U71A 2EA2A 2Q96A 2BWYA 1R5HA 4ZWUA 5CE6A 1C24A 2BWXA 4S00A 1WBQA 2P9AA 2NQ6A 1W2MA 4JUQA 4FO7A 4B28A 4U70A 3BIQA 1A16A 2GG2A 1B6AA 4IDYA 4ZWOA 4FLLA 3CB6A 2GG5A 3PKAA 3IU8A 3QOCA 5E2CA 4FLJA 1WN1A 4ZNGA 2EVMA 4IKRA 2ADUA 4A6WA 1KQ0A 1R58A 1MATA 1QXZA 3OVKA 1XGMA 4U6CA 4MATA 1YJ3A 3CTZA 2NQ7A 3OOOA 5D6EA 5CDVA 3CB5A 4U76A 2BHAA 4U6EA 2GA2A 3L7GA 5FCFA 4S2TP 1KQ9A 3O5VA 3PKEA 3Q6DA 3TB5A 5CLSA 2IW2A 1WKMA 3BITA 3MR1A 4Z7MA 4S01A 1BOAA 2BHBA 1C23A 4FKCA 1QZYA 1XNZA 5CDEA 2Q93A 4PNCA 1KP0A 4S2RP 4U6WA 2V3XA 4U6ZA 3S6BA 2GTXA 4A6VA 2GU5A 2BH3A 1C21A 2BWWA 4EGEA 2GG3A 3FMRA 4IKTA 2Q8KA 2B3LA 5JI6A 4FLIA 3PN9A 2EA4A 5FCHA 2EVCA 1R5GA 3MX6A 2V6CA 4U75A 5CNXA 2ZSGA 1C22A 2GG8A 2GGCA 1XGSA 5E5BA 1XGOA 1W7VA 3PKDA 3IG4A 2BN7A 2GU4A 2Q95A 4IKSA 4FUKA 3PKBA 2GG0A 2GG9A 2GG7A 4IF7A 1WL6A 4U6JA 2BHCA 3L24A 3MATA 4FLKA 2BB7A 4ZWPA 1YW9A 3IL0A 4RGZ1 1JAWA 1C27A 1YW8A 2BHDA 4IECA 4IPAA 1M35A 4IKUA 4OOKA 1YVMA 2BWVA 4HXXA 2DFIA 2GGBA 2Q92A 2B3KA 4KM3A 2P98A 2GZ5A 4PV4A 1WY2A 3PEBA 2B3HA 5JHUA 1PV9A 2P99A 1WLRA 2BWSA 1O0XA 2OAZA 4FO8A 2EVOA 2HOWA 3IU9A 4IU6A 4RZYA 1XGNA 4U73A 3PKCA 4QR8A 3RORA 2V3ZA 2G6PA 2OKNA 3FM3A 5CIKA 4U1BA 1BN5A 3IU7A 1CHMA 3D27A 2BWTA 2V3YA 4U69A 1YW7A 3I7MA 2MATA 1N51A 4RZZA 4R60A 2GU7A 1QXWA 3FMQA 5JFRA 3RVAA 1Y1NA 2BWUA
chains in the Genus database with same CATH superfamily
3BIPA 1QXYA 2Q94A 3TAVA 1WL9A 5D6FA 1B59A 5CDLA 2GU6A 4U71A 2EA2A 2Q96A 2BWYA 1R5HA 4ZWUA 5CE6A 1C24A 2BWXA 4S00A 1WBQA 2P9AA 2NQ6A 1W2MA 4JUQA 4FO7A 4B28A 4U70A 3BIQA 1A16A 2GG2A 1B6AA 4IDYA 4ZWOA 4FLLA 3CB6A 2GG5A 3PKAA 3IU8A 3QOCA 5E2CA 4FLJA 1WN1A 4ZNGA 2EVMA 4IKRA 2ADUA 4A6WA 1KQ0A 1R58A 1MATA 1QXZA 3OVKA 1XGMA 4U6CA 4MATA 1YJ3A 3CTZA 2NQ7A 3OOOA 5D6EA 5CDVA 3CB5A 4U76A 2BHAA 4U6EA 2GA2A 3L7GA 5FCFA 4S2TP 1KQ9A 3O5VA 3PKEA 3Q6DA 3TB5A 5CLSA 2IW2A 1WKMA 3BITA 3MR1A 4Z7MA 4S01A 1BOAA 2BHBA 1C23A 4FKCA 1QZYA 1XNZA 5CDEA 2Q93A 4PNCA 1KP0A 4S2RP 4U6WA 2V3XA 4U6ZA 3S6BA 2GTXA 4A6VA 2GU5A 2BH3A 1C21A 2BWWA 4EGEA 2GG3A 3FMRA 4IKTA 2Q8KA 2B3LA 5JI6A 4FLIA 3PN9A 2EA4A 5FCHA 2EVCA 1R5GA 3MX6A 2V6CA 4U75A 5CNXA 2ZSGA 1C22A 2GG8A 2GGCA 1XGSA 5E5BA 1XGOA 1W7VA 3PKDA 3IG4A 2BN7A 2GU4A 2Q95A 4IKSA 4FUKA 3PKBA 2GG0A 2GG9A 2GG7A 4IF7A 1WL6A 4U6JA 2BHCA 3L24A 3MATA 4FLKA 2BB7A 4ZWPA 1YW9A 3IL0A 4RGZ1 1JAWA 1C27A 1YW8A 2BHDA 4IECA 4IPAA 1M35A 4IKUA 4OOKA 1YVMA 2BWVA 4HXXA 2DFIA 2GGBA 2Q92A 2B3KA 4KM3A 2P98A 2GZ5A 4PV4A 1WY2A 3PEBA 2B3HA 5JHUA 1PV9A 2P99A 1WLRA 2BWSA 1O0XA 2OAZA 4FO8A 2EVOA 2HOWA 3IU9A 4IU6A 4RZYA 1XGNA 4U73A 3PKCA 4QR8A 3RORA 2V3ZA 2G6PA 2OKNA 3FM3A 5CIKA 4U1BA 1BN5A 3IU7A 1CHMA 3D27A 2BWTA 2V3YA 4U69A 1YW7A 3I7MA 2MATA 1N51A 4RZZA 4R60A 2GU7A 1QXWA 3FMQA 5JFRA 3RVAA 1Y1NA 2BWUA
chains in the Genus database with same CATH topology
3BIPA 1QXYA 2Q94A 3TAVA 1WL9A 5D6FA 1B59A 5CDLA 2GU6A 4U71A 2EA2A 2Q96A 2BWYA 1R5HA 4ZWUA 5CE6A 1C24A 2BWXA 4S00A 1WBQA 2P9AA 2NQ6A 1W2MA 4JUQA 4FO7A 4B28A 4U70A 3BIQA 1A16A 2GG2A 1B6AA 4IDYA 4ZWOA 4FLLA 3CB6A 2GG5A 3PKAA 3IU8A 3QOCA 5E2CA 4FLJA 1WN1A 4ZNGA 2EVMA 4IKRA 2ADUA 4A6WA 1KQ0A 1R58A 1MATA 1QXZA 3OVKA 1XGMA 4U6CA 4MATA 1YJ3A 3CTZA 2NQ7A 3OOOA 5D6EA 5CDVA 3CB5A 4U76A 2BHAA 4U6EA 2GA2A 3L7GA 5FCFA 4S2TP 1KQ9A 3O5VA 3PKEA 3Q6DA 3TB5A 5CLSA 2IW2A 1WKMA 3BITA 3MR1A 4Z7MA 4S01A 1BOAA 2BHBA 1C23A 4FKCA 1QZYA 1XNZA 5CDEA 2Q93A 4PNCA 1KP0A 4S2RP 4U6WA 2V3XA 4U6ZA 3S6BA 2GTXA 4A6VA 2GU5A 2BH3A 1C21A 2BWWA 4EGEA 2GG3A 3FMRA 4IKTA 2Q8KA 2B3LA 5JI6A 4FLIA 3PN9A 2EA4A 5FCHA 2EVCA 1R5GA 3MX6A 2V6CA 4U75A 5CNXA 2ZSGA 1C22A 2GG8A 2GGCA 1XGSA 5E5BA 1XGOA 1W7VA 3PKDA 3IG4A 2BN7A 2GU4A 2Q95A 4IKSA 4FUKA 3PKBA 2GG0A 2GG9A 2GG7A 4IF7A 1WL6A 4U6JA 2BHCA 3L24A 3MATA 4FLKA 2BB7A 4ZWPA 1YW9A 3IL0A 4RGZ1 1JAWA 1C27A 1YW8A 2BHDA 4IECA 4IPAA 1M35A 4IKUA 4OOKA 1YVMA 2BWVA 4HXXA 2DFIA 2GGBA 2Q92A 2B3KA 4KM3A 2P98A 2GZ5A 4PV4A 1WY2A 3PEBA 2B3HA 5JHUA 1PV9A 2P99A 1WLRA 2BWSA 1O0XA 2OAZA 4FO8A 2EVOA 2HOWA 3IU9A 4IU6A 4RZYA 1XGNA 4U73A 3PKCA 4QR8A 3RORA 2V3ZA 2G6PA 2OKNA 3FM3A 5CIKA 4U1BA 1BN5A 3IU7A 1CHMA 3D27A 2BWTA 2V3YA 4U69A 1YW7A 3I7MA 2MATA 1N51A 4RZZA 4R60A 2GU7A 1QXWA 3FMQA 5JFRA 3RVAA 1Y1NA 2BWUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BIP A;  1QXY A;  2Q94 A;  3TAV A;  1WL9 A;  5D6F A;  1B59 A;  5CDL A;  2GU6 A;  4U71 A;  2EA2 A;  2Q96 A;  2BWY A;  1R5H A;  4ZWU A;  5CE6 A;  1C24 A;  2BWX A;  4S00 A;  1WBQ A;  2P9A A;  2NQ6 A;  1W2M A;  4JUQ A;  4FO7 A;  4B28 A;  4U70 A;  3BIQ A;  1A16 A;  2GG2 A;  1B6A A;  4IDY A;  4ZWO A;  4FLL A;  3CB6 A;  2GG5 A;  3PKA A;  3IU8 A;  3QOC A;  5E2C A;  4FLJ A;  1WN1 A;  4ZNG A;  2EVM A;  4IKR A;  2ADU A;  4A6W A;  1KQ0 A;  1R58 A;  1MAT A;  1QXZ A;  3OVK A;  1XGM A;  4U6C A;  4MAT A;  1YJ3 A;  3CTZ A;  2NQ7 A;  3OOO A;  5D6E A;  5CDV A;  3CB5 A;  4U76 A;  2BHA A;  4U6E A;  2GA2 A;  3L7G A;  5FCF A;  4S2T P;  1KQ9 A;  3O5V A;  3PKE A;  3Q6D A;  3TB5 A;  5CLS A;  2IW2 A;  1WKM A;  3BIT A;  3MR1 A;  4Z7M A;  4S01 A;  1BOA A;  2BHB A;  1C23 A;  4FKC A;  1QZY A;  1XNZ A;  5CDE A;  2Q93 A;  4PNC A;  1KP0 A;  4S2R P;  4U6W A;  2V3X A;  4U6Z A;  3S6B A;  2GTX A;  4A6V A;  2GU5 A;  2BH3 A;  1C21 A;  2BWW A;  4EGE A;  2GG3 A;  3FMR A;  4IKT A;  2Q8K A;  2B3L A;  5JI6 A;  4FLI A;  3PN9 A;  2EA4 A;  5FCH A;  2EVC A;  1R5G A;  3MX6 A;  2V6C A;  4U75 A;  5CNX A;  2ZSG A;  1C22 A;  2GG8 A;  2GGC A;  1XGS A;  5E5B A;  1XGO A;  1W7V A;  3PKD A;  3IG4 A;  2BN7 A;  2GU4 A;  2Q95 A;  4IKS A;  4FUK A;  3PKB A;  2GG0 A;  2GG9 A;  2GG7 A;  4IF7 A;  1WL6 A;  4U6J A;  2BHC A;  3L24 A;  3MAT A;  4FLK A;  2BB7 A;  4ZWP A;  1YW9 A;  3IL0 A;  4RGZ 1;  1JAW A;  1C27 A;  1YW8 A;  2BHD A;  4IEC A;  4IPA A;  1M35 A;  4IKU A;  4OOK A;  1YVM A;  2BWV A;  4HXX A;  2DFI A;  2GGB A;  2Q92 A;  2B3K A;  4KM3 A;  2P98 A;  2GZ5 A;  4PV4 A;  1WY2 A;  3PEB A;  2B3H A;  5JHU A;  1PV9 A;  2P99 A;  1WLR A;  2BWS A;  1O0X A;  2OAZ A;  4FO8 A;  2EVO A;  2HOW A;  3IU9 A;  4IU6 A;  4RZY A;  1XGN A;  4U73 A;  3PKC A;  4QR8 A;  3ROR A;  2V3Z A;  2G6P A;  2OKN A;  3FM3 A;  5CIK A;  4U1B A;  1BN5 A;  3IU7 A;  1CHM A;  3D27 A;  2BWT A;  2V3Y A;  4U69 A;  1YW7 A;  3I7M A;  2MAT A;  1N51 A;  4RZZ A;  4R60 A;  2GU7 A;  1QXW A;  3FMQ A;  5JFR A;  3RVA A;  1Y1N A;  2BWU A; 
#chains in the Genus database with same CATH topology
 3BIP A;  1QXY A;  2Q94 A;  3TAV A;  1WL9 A;  5D6F A;  1B59 A;  5CDL A;  2GU6 A;  4U71 A;  2EA2 A;  2Q96 A;  2BWY A;  1R5H A;  4ZWU A;  5CE6 A;  1C24 A;  2BWX A;  4S00 A;  1WBQ A;  2P9A A;  2NQ6 A;  1W2M A;  4JUQ A;  4FO7 A;  4B28 A;  4U70 A;  3BIQ A;  1A16 A;  2GG2 A;  1B6A A;  4IDY A;  4ZWO A;  4FLL A;  3CB6 A;  2GG5 A;  3PKA A;  3IU8 A;  3QOC A;  5E2C A;  4FLJ A;  1WN1 A;  4ZNG A;  2EVM A;  4IKR A;  2ADU A;  4A6W A;  1KQ0 A;  1R58 A;  1MAT A;  1QXZ A;  3OVK A;  1XGM A;  4U6C A;  4MAT A;  1YJ3 A;  3CTZ A;  2NQ7 A;  3OOO A;  5D6E A;  5CDV A;  3CB5 A;  4U76 A;  2BHA A;  4U6E A;  2GA2 A;  3L7G A;  5FCF A;  4S2T P;  1KQ9 A;  3O5V A;  3PKE A;  3Q6D A;  3TB5 A;  5CLS A;  2IW2 A;  1WKM A;  3BIT A;  3MR1 A;  4Z7M A;  4S01 A;  1BOA A;  2BHB A;  1C23 A;  4FKC A;  1QZY A;  1XNZ A;  5CDE A;  2Q93 A;  4PNC A;  1KP0 A;  4S2R P;  4U6W A;  2V3X A;  4U6Z A;  3S6B A;  2GTX A;  4A6V A;  2GU5 A;  2BH3 A;  1C21 A;  2BWW A;  4EGE A;  2GG3 A;  3FMR A;  4IKT A;  2Q8K A;  2B3L A;  5JI6 A;  4FLI A;  3PN9 A;  2EA4 A;  5FCH A;  2EVC A;  1R5G A;  3MX6 A;  2V6C A;  4U75 A;  5CNX A;  2ZSG A;  1C22 A;  2GG8 A;  2GGC A;  1XGS A;  5E5B A;  1XGO A;  1W7V A;  3PKD A;  3IG4 A;  2BN7 A;  2GU4 A;  2Q95 A;  4IKS A;  4FUK A;  3PKB A;  2GG0 A;  2GG9 A;  2GG7 A;  4IF7 A;  1WL6 A;  4U6J A;  2BHC A;  3L24 A;  3MAT A;  4FLK A;  2BB7 A;  4ZWP A;  1YW9 A;  3IL0 A;  4RGZ 1;  1JAW A;  1C27 A;  1YW8 A;  2BHD A;  4IEC A;  4IPA A;  1M35 A;  4IKU A;  4OOK A;  1YVM A;  2BWV A;  4HXX A;  2DFI A;  2GGB A;  2Q92 A;  2B3K A;  4KM3 A;  2P98 A;  2GZ5 A;  4PV4 A;  1WY2 A;  3PEB A;  2B3H A;  5JHU A;  1PV9 A;  2P99 A;  1WLR A;  2BWS A;  1O0X A;  2OAZ A;  4FO8 A;  2EVO A;  2HOW A;  3IU9 A;  4IU6 A;  4RZY A;  1XGN A;  4U73 A;  3PKC A;  4QR8 A;  3ROR A;  2V3Z A;  2G6P A;  2OKN A;  3FM3 A;  5CIK A;  4U1B A;  1BN5 A;  3IU7 A;  1CHM A;  3D27 A;  2BWT A;  2V3Y A;  4U69 A;  1YW7 A;  3I7M A;  2MAT A;  1N51 A;  4RZZ A;  4R60 A;  2GU7 A;  1QXW A;  3FMQ A;  5JFR A;  3RVA A;  1Y1N A;  2BWU A; 
#chains in the Genus database with same CATH homology
 3BIP A;  1QXY A;  2Q94 A;  3TAV A;  1WL9 A;  5D6F A;  1B59 A;  5CDL A;  2GU6 A;  4U71 A;  2EA2 A;  2Q96 A;  2BWY A;  1R5H A;  4ZWU A;  5CE6 A;  1C24 A;  2BWX A;  4S00 A;  1WBQ A;  2P9A A;  2NQ6 A;  1W2M A;  4JUQ A;  4FO7 A;  4B28 A;  4U70 A;  3BIQ A;  1A16 A;  2GG2 A;  1B6A A;  4IDY A;  4ZWO A;  4FLL A;  3CB6 A;  2GG5 A;  3PKA A;  3IU8 A;  3QOC A;  5E2C A;  4FLJ A;  1WN1 A;  4ZNG A;  2EVM A;  4IKR A;  2ADU A;  4A6W A;  1KQ0 A;  1R58 A;  1MAT A;  1QXZ A;  3OVK A;  1XGM A;  4U6C A;  4MAT A;  1YJ3 A;  3CTZ A;  2NQ7 A;  3OOO A;  5D6E A;  5CDV A;  3CB5 A;  4U76 A;  2BHA A;  4U6E A;  2GA2 A;  3L7G A;  5FCF A;  4S2T P;  1KQ9 A;  3O5V A;  3PKE A;  3Q6D A;  3TB5 A;  5CLS A;  2IW2 A;  1WKM A;  3BIT A;  3MR1 A;  4Z7M A;  4S01 A;  1BOA A;  2BHB A;  1C23 A;  4FKC A;  1QZY A;  1XNZ A;  5CDE A;  2Q93 A;  4PNC A;  1KP0 A;  4S2R P;  4U6W A;  2V3X A;  4U6Z A;  3S6B A;  2GTX A;  4A6V A;  2GU5 A;  2BH3 A;  1C21 A;  2BWW A;  4EGE A;  2GG3 A;  3FMR A;  4IKT A;  2Q8K A;  2B3L A;  5JI6 A;  4FLI A;  3PN9 A;  2EA4 A;  5FCH A;  2EVC A;  1R5G A;  3MX6 A;  2V6C A;  4U75 A;  5CNX A;  2ZSG A;  1C22 A;  2GG8 A;  2GGC A;  1XGS A;  5E5B A;  1XGO A;  1W7V A;  3PKD A;  3IG4 A;  2BN7 A;  2GU4 A;  2Q95 A;  4IKS A;  4FUK A;  3PKB A;  2GG0 A;  2GG9 A;  2GG7 A;  4IF7 A;  1WL6 A;  4U6J A;  2BHC A;  3L24 A;  3MAT A;  4FLK A;  2BB7 A;  4ZWP A;  1YW9 A;  3IL0 A;  4RGZ 1;  1JAW A;  1C27 A;  1YW8 A;  2BHD A;  4IEC A;  4IPA A;  1M35 A;  4IKU A;  4OOK A;  1YVM A;  2BWV A;  4HXX A;  2DFI A;  2GGB A;  2Q92 A;  2B3K A;  4KM3 A;  2P98 A;  2GZ5 A;  4PV4 A;  1WY2 A;  3PEB A;  2B3H A;  5JHU A;  1PV9 A;  2P99 A;  1WLR A;  2BWS A;  1O0X A;  2OAZ A;  4FO8 A;  2EVO A;  2HOW A;  3IU9 A;  4IU6 A;  4RZY A;  1XGN A;  4U73 A;  3PKC A;  4QR8 A;  3ROR A;  2V3Z A;  2G6P A;  2OKN A;  3FM3 A;  5CIK A;  4U1B A;  1BN5 A;  3IU7 A;  1CHM A;  3D27 A;  2BWT A;  2V3Y A;  4U69 A;  1YW7 A;  3I7M A;  2MAT A;  1N51 A;  4RZZ A;  4R60 A;  2GU7 A;  1QXW A;  3FMQ A;  5JFR A;  3RVA A;  1Y1N A;  2BWU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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