3Q6DA

Xaa-pro dipeptidase from bacillus anthracis.
Total Genus 126
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
126
sequence length
355
structure length
355
Chain Sequence
NAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTAGVVLISKKRAQFITDFRYVEQASKQAVGYEIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAIDAEFIPTSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSSSFDIIVASGLRSALPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYFGHSTGHGIGLEIHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSEGNEVITKSPKELIIL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.


  Genus data interpretation
Chord Diagram
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molecule tags Viral protein
source organism Bacillus anthracis
publication title Xaa-Pro dipeptidase from Bacillus anthracis.
rcsb
molecule keywords Proline dipeptidase
total genus 126
structure length 355
sequence length 355
chains with identical sequence B, C, D
ec nomenclature ec 3.4.13.9: Xaa-Pro dipeptidase.
pdb deposition date 2010-12-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3q6dA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3q6dA02
2BHDA 2Q94A 2BH3A 1WL9A 2V3ZA 3PKBA 3Q6DA 1MATA 4FLJA 3IL0A 3MR1A 5JFRA 2GGCA 3MATA 1XNZA 4U76A 2BWXA 4FLKA 3OVKA 5JHUA 1WBQA 2Q93A 2NQ6A 2Q92A 4FO8A 5D6FA 1WY2A 5CLSA 2IW2A 2BN7A 3CB6A 1WN1A 3PN9A 5CDLA 4JUQA 4ZNGA 1B6AA 2BWUA 1XGMA 2GG7A 1BOAA 1C23A 1YVMA 4IKTA 2B3LA 2HOWA 1R5HA 4R60A 1YJ3A 2B3HA 3IU8A 1KQ0A 4A6VA 3FM3A 4QR8A 4ZWOA 4FUKA 2EVOA 4FO7A 2Q95A 1C24A 2ADUA 2BWSA 2BHAA 1QXWA 2V6CA 2BHBA 2EA2A 2V3XA 2P99A 2P9AA 5D6EA 4S2TP 1A16A 2EA4A 2BWYA 4U6EA 5E2CA 3PKAA 2DFIA 1C27A 4IU6A 3RVAA 1KP0A 2OAZA 3IU9A 4Z7MA 4ZWPA 2GG8A 2GU4A 1W2MA 1B59A 1XGSA 1O0XA 2GG5A 3IG4A 3MX6A 4U6CA 2GU7A 3PKDA 3FMQA 1CHMA 2NQ7A 2BB7A 4IKUA 3BIQA 4HXXA 2B3KA 3QOCA 4IKRA 3IU7A 4U73A 5FCHA 4IECA 2G6PA 3PKEA 4FKCA 2GG0A 2BWVA 3I7MA 4IPAA 5CNXA 4IDYA 4MATA 1N51A 4PNCA 2GA2A 1C22A 2GU5A 4IKSA 4U6ZA 1R58A 1YW9A 2GG3A 1YW8A 4A6WA 1QXZA 2GG2A 4U71A 4PV4A 5FCFA 1R5GA 3TB5A 4RGZ1 4EGEA 2P98A 4U69A 2GU6A 3OOOA 4S00A 5E5BA 3D27A 2BWWA 3L7GA 1XGNA 3RORA 2Q8KA 2GTXA 4OOKA 3CB5A 4U6JA 4RZZA 4U70A 4U6WA 4U1BA 1WLRA 3S6BA 4ZWUA 5CDVA 1XGOA 3PKCA 3FMRA 1KQ9A 2GZ5A 1QXYA 3TAVA 2EVCA 4U75A 1PV9A 4FLIA 4FLLA 2BHCA 5CIKA 5CDEA 1QZYA 2OKNA 2EVMA 4B28A 3PEBA 4RZYA 1BN5A 2GGBA 2GG9A 1W7VA 1JAWA 3CTZA 1M35A 2V3YA 2ZSGA 1C21A 3L24A 1YW7A 3BIPA 2Q96A 5JI6A 2MATA 1WKMA 4S2RP 5CE6A 4IF7A 2BWTA 3BITA 4S01A 1Y1NA 4KM3A 3O5VA 1WL6A
chains in the Genus database with same CATH superfamily
2BHDA 2Q94A 2BH3A 1WL9A 2V3ZA 3PKBA 3Q6DA 1MATA 4FLJA 3IL0A 3MR1A 5JFRA 2GGCA 3MATA 1XNZA 4U76A 2BWXA 4FLKA 3OVKA 5JHUA 1WBQA 2Q93A 2NQ6A 2Q92A 4FO8A 5D6FA 1WY2A 5CLSA 2IW2A 2BN7A 3CB6A 1WN1A 3PN9A 5CDLA 4JUQA 4ZNGA 1B6AA 2BWUA 1XGMA 2GG7A 1BOAA 1C23A 1YVMA 4IKTA 2B3LA 2HOWA 1R5HA 4R60A 1YJ3A 2B3HA 3IU8A 1KQ0A 4A6VA 3FM3A 4QR8A 4ZWOA 4FUKA 2EVOA 4FO7A 2Q95A 1C24A 2ADUA 2BWSA 2BHAA 1QXWA 2V6CA 2BHBA 2EA2A 2V3XA 2P99A 2P9AA 5D6EA 4S2TP 1A16A 2EA4A 2BWYA 4U6EA 5E2CA 3PKAA 2DFIA 1C27A 4IU6A 3RVAA 1KP0A 2OAZA 3IU9A 4Z7MA 4ZWPA 2GG8A 2GU4A 1W2MA 1B59A 1XGSA 1O0XA 2GG5A 3IG4A 3MX6A 4U6CA 2GU7A 3PKDA 3FMQA 1CHMA 2NQ7A 2BB7A 4IKUA 3BIQA 4HXXA 2B3KA 3QOCA 4IKRA 3IU7A 4U73A 5FCHA 4IECA 2G6PA 3PKEA 4FKCA 2GG0A 2BWVA 3I7MA 4IPAA 5CNXA 4IDYA 4MATA 1N51A 4PNCA 2GA2A 1C22A 2GU5A 4IKSA 4U6ZA 1R58A 1YW9A 2GG3A 1YW8A 4A6WA 1QXZA 2GG2A 4U71A 4PV4A 5FCFA 1R5GA 3TB5A 4RGZ1 4EGEA 2P98A 4U69A 2GU6A 3OOOA 4S00A 5E5BA 3D27A 2BWWA 3L7GA 1XGNA 3RORA 2Q8KA 2GTXA 4OOKA 3CB5A 4U6JA 4RZZA 4U70A 4U6WA 4U1BA 1WLRA 3S6BA 4ZWUA 5CDVA 1XGOA 3PKCA 3FMRA 1KQ9A 2GZ5A 1QXYA 3TAVA 2EVCA 4U75A 1PV9A 4FLIA 4FLLA 2BHCA 5CIKA 5CDEA 1QZYA 2OKNA 2EVMA 4B28A 3PEBA 4RZYA 1BN5A 2GGBA 2GG9A 1W7VA 1JAWA 3CTZA 1M35A 2V3YA 2ZSGA 1C21A 3L24A 1YW7A 3BIPA 2Q96A 5JI6A 2MATA 1WKMA 4S2RP 5CE6A 4IF7A 2BWTA 3BITA 4S01A 1Y1NA 4KM3A 3O5VA 1WL6A
chains in the Genus database with same CATH topology
2BHDA 2Q94A 2BH3A 1WL9A 2V3ZA 3PKBA 3Q6DA 1MATA 4FLJA 3IL0A 3MR1A 5JFRA 2GGCA 3MATA 1XNZA 4U76A 2BWXA 4FLKA 3OVKA 5JHUA 1WBQA 2Q93A 2NQ6A 2Q92A 4FO8A 5D6FA 1WY2A 5CLSA 2IW2A 2BN7A 3CB6A 1WN1A 3PN9A 5CDLA 4JUQA 4ZNGA 1B6AA 2BWUA 1XGMA 2GG7A 1BOAA 1C23A 1YVMA 4IKTA 2B3LA 2HOWA 1R5HA 4R60A 1YJ3A 2B3HA 3IU8A 1KQ0A 4A6VA 3FM3A 4QR8A 4ZWOA 4FUKA 2EVOA 4FO7A 2Q95A 1C24A 2ADUA 2BWSA 2BHAA 1QXWA 2V6CA 2BHBA 2EA2A 2V3XA 2P99A 2P9AA 5D6EA 4S2TP 1A16A 2EA4A 2BWYA 4U6EA 5E2CA 3PKAA 2DFIA 1C27A 4IU6A 3RVAA 1KP0A 2OAZA 3IU9A 4Z7MA 4ZWPA 2GG8A 2GU4A 1W2MA 1B59A 1XGSA 1O0XA 2GG5A 3IG4A 3MX6A 4U6CA 2GU7A 3PKDA 3FMQA 1CHMA 2NQ7A 2BB7A 4IKUA 3BIQA 4HXXA 2B3KA 3QOCA 4IKRA 3IU7A 4U73A 5FCHA 4IECA 2G6PA 3PKEA 4FKCA 2GG0A 2BWVA 3I7MA 4IPAA 5CNXA 4IDYA 4MATA 1N51A 4PNCA 2GA2A 1C22A 2GU5A 4IKSA 4U6ZA 1R58A 1YW9A 2GG3A 1YW8A 4A6WA 1QXZA 2GG2A 4U71A 4PV4A 5FCFA 1R5GA 3TB5A 4RGZ1 4EGEA 2P98A 4U69A 2GU6A 3OOOA 4S00A 5E5BA 3D27A 2BWWA 3L7GA 1XGNA 3RORA 2Q8KA 2GTXA 4OOKA 3CB5A 4U6JA 4RZZA 4U70A 4U6WA 4U1BA 1WLRA 3S6BA 4ZWUA 5CDVA 1XGOA 3PKCA 3FMRA 1KQ9A 2GZ5A 1QXYA 3TAVA 2EVCA 4U75A 1PV9A 4FLIA 4FLLA 2BHCA 5CIKA 5CDEA 1QZYA 2OKNA 2EVMA 4B28A 3PEBA 4RZYA 1BN5A 2GGBA 2GG9A 1W7VA 1JAWA 3CTZA 1M35A 2V3YA 2ZSGA 1C21A 3L24A 1YW7A 3BIPA 2Q96A 5JI6A 2MATA 1WKMA 4S2RP 5CE6A 4IF7A 2BWTA 3BITA 4S01A 1Y1NA 4KM3A 3O5VA 1WL6A
chains in the Genus database with same CATH homology

  
#chains in the Genus database with same CATH superfamily
 2BHD A;  2Q94 A;  2BH3 A;  1WL9 A;  2V3Z A;  3PKB A;  3Q6D A;  1MAT A;  4FLJ A;  3IL0 A;  3MR1 A;  5JFR A;  2GGC A;  3MAT A;  1XNZ A;  4U76 A;  2BWX A;  4FLK A;  3OVK A;  5JHU A;  1WBQ A;  2Q93 A;  2NQ6 A;  2Q92 A;  4FO8 A;  5D6F A;  1WY2 A;  5CLS A;  2IW2 A;  2BN7 A;  3CB6 A;  1WN1 A;  3PN9 A;  5CDL A;  4JUQ A;  4ZNG A;  1B6A A;  2BWU A;  1XGM A;  2GG7 A;  1BOA A;  1C23 A;  1YVM A;  4IKT A;  2B3L A;  2HOW A;  1R5H A;  4R60 A;  1YJ3 A;  2B3H A;  3IU8 A;  1KQ0 A;  4A6V A;  3FM3 A;  4QR8 A;  4ZWO A;  4FUK A;  2EVO A;  4FO7 A;  2Q95 A;  1C24 A;  2ADU A;  2BWS A;  2BHA A;  1QXW A;  2V6C A;  2BHB A;  2EA2 A;  2V3X A;  2P99 A;  2P9A A;  5D6E A;  4S2T P;  1A16 A;  2EA4 A;  2BWY A;  4U6E A;  5E2C A;  3PKA A;  2DFI A;  1C27 A;  4IU6 A;  3RVA A;  1KP0 A;  2OAZ A;  3IU9 A;  4Z7M A;  4ZWP A;  2GG8 A;  2GU4 A;  1W2M A;  1B59 A;  1XGS A;  1O0X A;  2GG5 A;  3IG4 A;  3MX6 A;  4U6C A;  2GU7 A;  3PKD A;  3FMQ A;  1CHM A;  2NQ7 A;  2BB7 A;  4IKU A;  3BIQ A;  4HXX A;  2B3K A;  3QOC A;  4IKR A;  3IU7 A;  4U73 A;  5FCH A;  4IEC A;  2G6P A;  3PKE A;  4FKC A;  2GG0 A;  2BWV A;  3I7M A;  4IPA A;  5CNX A;  4IDY A;  4MAT A;  1N51 A;  4PNC A;  2GA2 A;  1C22 A;  2GU5 A;  4IKS A;  4U6Z A;  1R58 A;  1YW9 A;  2GG3 A;  1YW8 A;  4A6W A;  1QXZ A;  2GG2 A;  4U71 A;  4PV4 A;  5FCF A;  1R5G A;  3TB5 A;  4RGZ 1;  4EGE A;  2P98 A;  4U69 A;  2GU6 A;  3OOO A;  4S00 A;  5E5B A;  3D27 A;  2BWW A;  3L7G A;  1XGN A;  3ROR A;  2Q8K A;  2GTX A;  4OOK A;  3CB5 A;  4U6J A;  4RZZ A;  4U70 A;  4U6W A;  4U1B A;  1WLR A;  3S6B A;  4ZWU A;  5CDV A;  1XGO A;  3PKC A;  3FMR A;  1KQ9 A;  2GZ5 A;  1QXY A;  3TAV A;  2EVC A;  4U75 A;  1PV9 A;  4FLI A;  4FLL A;  2BHC A;  5CIK A;  5CDE A;  1QZY A;  2OKN A;  2EVM A;  4B28 A;  3PEB A;  4RZY A;  1BN5 A;  2GGB A;  2GG9 A;  1W7V A;  1JAW A;  3CTZ A;  1M35 A;  2V3Y A;  2ZSG A;  1C21 A;  3L24 A;  1YW7 A;  3BIP A;  2Q96 A;  5JI6 A;  2MAT A;  1WKM A;  4S2R P;  5CE6 A;  4IF7 A;  2BWT A;  3BIT A;  4S01 A;  1Y1N A;  4KM3 A;  3O5V A;  1WL6 A; 
#chains in the Genus database with same CATH topology
 2BHD A;  2Q94 A;  2BH3 A;  1WL9 A;  2V3Z A;  3PKB A;  3Q6D A;  1MAT A;  4FLJ A;  3IL0 A;  3MR1 A;  5JFR A;  2GGC A;  3MAT A;  1XNZ A;  4U76 A;  2BWX A;  4FLK A;  3OVK A;  5JHU A;  1WBQ A;  2Q93 A;  2NQ6 A;  2Q92 A;  4FO8 A;  5D6F A;  1WY2 A;  5CLS A;  2IW2 A;  2BN7 A;  3CB6 A;  1WN1 A;  3PN9 A;  5CDL A;  4JUQ A;  4ZNG A;  1B6A A;  2BWU A;  1XGM A;  2GG7 A;  1BOA A;  1C23 A;  1YVM A;  4IKT A;  2B3L A;  2HOW A;  1R5H A;  4R60 A;  1YJ3 A;  2B3H A;  3IU8 A;  1KQ0 A;  4A6V A;  3FM3 A;  4QR8 A;  4ZWO A;  4FUK A;  2EVO A;  4FO7 A;  2Q95 A;  1C24 A;  2ADU A;  2BWS A;  2BHA A;  1QXW A;  2V6C A;  2BHB A;  2EA2 A;  2V3X A;  2P99 A;  2P9A A;  5D6E A;  4S2T P;  1A16 A;  2EA4 A;  2BWY A;  4U6E A;  5E2C A;  3PKA A;  2DFI A;  1C27 A;  4IU6 A;  3RVA A;  1KP0 A;  2OAZ A;  3IU9 A;  4Z7M A;  4ZWP A;  2GG8 A;  2GU4 A;  1W2M A;  1B59 A;  1XGS A;  1O0X A;  2GG5 A;  3IG4 A;  3MX6 A;  4U6C A;  2GU7 A;  3PKD A;  3FMQ A;  1CHM A;  2NQ7 A;  2BB7 A;  4IKU A;  3BIQ A;  4HXX A;  2B3K A;  3QOC A;  4IKR A;  3IU7 A;  4U73 A;  5FCH A;  4IEC A;  2G6P A;  3PKE A;  4FKC A;  2GG0 A;  2BWV A;  3I7M A;  4IPA A;  5CNX A;  4IDY A;  4MAT A;  1N51 A;  4PNC A;  2GA2 A;  1C22 A;  2GU5 A;  4IKS A;  4U6Z A;  1R58 A;  1YW9 A;  2GG3 A;  1YW8 A;  4A6W A;  1QXZ A;  2GG2 A;  4U71 A;  4PV4 A;  5FCF A;  1R5G A;  3TB5 A;  4RGZ 1;  4EGE A;  2P98 A;  4U69 A;  2GU6 A;  3OOO A;  4S00 A;  5E5B A;  3D27 A;  2BWW A;  3L7G A;  1XGN A;  3ROR A;  2Q8K A;  2GTX A;  4OOK A;  3CB5 A;  4U6J A;  4RZZ A;  4U70 A;  4U6W A;  4U1B A;  1WLR A;  3S6B A;  4ZWU A;  5CDV A;  1XGO A;  3PKC A;  3FMR A;  1KQ9 A;  2GZ5 A;  1QXY A;  3TAV A;  2EVC A;  4U75 A;  1PV9 A;  4FLI A;  4FLL A;  2BHC A;  5CIK A;  5CDE A;  1QZY A;  2OKN A;  2EVM A;  4B28 A;  3PEB A;  4RZY A;  1BN5 A;  2GGB A;  2GG9 A;  1W7V A;  1JAW A;  3CTZ A;  1M35 A;  2V3Y A;  2ZSG A;  1C21 A;  3L24 A;  1YW7 A;  3BIP A;  2Q96 A;  5JI6 A;  2MAT A;  1WKM A;  4S2R P;  5CE6 A;  4IF7 A;  2BWT A;  3BIT A;  4S01 A;  1Y1N A;  4KM3 A;  3O5V A;  1WL6 A; 
#chains in the Genus database with same CATH homology
 2BHD A;  2Q94 A;  2BH3 A;  1WL9 A;  2V3Z A;  3PKB A;  3Q6D A;  1MAT A;  4FLJ A;  3IL0 A;  3MR1 A;  5JFR A;  2GGC A;  3MAT A;  1XNZ A;  4U76 A;  2BWX A;  4FLK A;  3OVK A;  5JHU A;  1WBQ A;  2Q93 A;  2NQ6 A;  2Q92 A;  4FO8 A;  5D6F A;  1WY2 A;  5CLS A;  2IW2 A;  2BN7 A;  3CB6 A;  1WN1 A;  3PN9 A;  5CDL A;  4JUQ A;  4ZNG A;  1B6A A;  2BWU A;  1XGM A;  2GG7 A;  1BOA A;  1C23 A;  1YVM A;  4IKT A;  2B3L A;  2HOW A;  1R5H A;  4R60 A;  1YJ3 A;  2B3H A;  3IU8 A;  1KQ0 A;  4A6V A;  3FM3 A;  4QR8 A;  4ZWO A;  4FUK A;  2EVO A;  4FO7 A;  2Q95 A;  1C24 A;  2ADU A;  2BWS A;  2BHA A;  1QXW A;  2V6C A;  2BHB A;  2EA2 A;  2V3X A;  2P99 A;  2P9A A;  5D6E A;  4S2T P;  1A16 A;  2EA4 A;  2BWY A;  4U6E A;  5E2C A;  3PKA A;  2DFI A;  1C27 A;  4IU6 A;  3RVA A;  1KP0 A;  2OAZ A;  3IU9 A;  4Z7M A;  4ZWP A;  2GG8 A;  2GU4 A;  1W2M A;  1B59 A;  1XGS A;  1O0X A;  2GG5 A;  3IG4 A;  3MX6 A;  4U6C A;  2GU7 A;  3PKD A;  3FMQ A;  1CHM A;  2NQ7 A;  2BB7 A;  4IKU A;  3BIQ A;  4HXX A;  2B3K A;  3QOC A;  4IKR A;  3IU7 A;  4U73 A;  5FCH A;  4IEC A;  2G6P A;  3PKE A;  4FKC A;  2GG0 A;  2BWV A;  3I7M A;  4IPA A;  5CNX A;  4IDY A;  4MAT A;  1N51 A;  4PNC A;  2GA2 A;  1C22 A;  2GU5 A;  4IKS A;  4U6Z A;  1R58 A;  1YW9 A;  2GG3 A;  1YW8 A;  4A6W A;  1QXZ A;  2GG2 A;  4U71 A;  4PV4 A;  5FCF A;  1R5G A;  3TB5 A;  4RGZ 1;  4EGE A;  2P98 A;  4U69 A;  2GU6 A;  3OOO A;  4S00 A;  5E5B A;  3D27 A;  2BWW A;  3L7G A;  1XGN A;  3ROR A;  2Q8K A;  2GTX A;  4OOK A;  3CB5 A;  4U6J A;  4RZZ A;  4U70 A;  4U6W A;  4U1B A;  1WLR A;  3S6B A;  4ZWU A;  5CDV A;  1XGO A;  3PKC A;  3FMR A;  1KQ9 A;  2GZ5 A;  1QXY A;  3TAV A;  2EVC A;  4U75 A;  1PV9 A;  4FLI A;  4FLL A;  2BHC A;  5CIK A;  5CDE A;  1QZY A;  2OKN A;  2EVM A;  4B28 A;  3PEB A;  4RZY A;  1BN5 A;  2GGB A;  2GG9 A;  1W7V A;  1JAW A;  3CTZ A;  1M35 A;  2V3Y A;  2ZSG A;  1C21 A;  3L24 A;  1YW7 A;  3BIP A;  2Q96 A;  5JI6 A;  2MAT A;  1WKM A;  4S2R P;  5CE6 A;  4IF7 A;  2BWT A;  3BIT A;  4S01 A;  1Y1N A;  4KM3 A;  3O5V A;  1WL6 A;
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

  
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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