3Q6DA

Xaa-pro dipeptidase from bacillus anthracis.
Total Genus 126
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
126
sequence length
355
structure length
355
Chain Sequence
NAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTAGVVLISKKRAQFITDFRYVEQASKQAVGYEIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAIDAEFIPTSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSSSFDIIVASGLRSALPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYFGHSTGHGIGLEIHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSEGNEVITKSPKELIIL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Proline dipeptidase
publication title Xaa-Pro dipeptidase from Bacillus anthracis.
rcsb
source organism Bacillus anthracis
molecule tags Viral protein
total genus 126
structure length 355
sequence length 355
chains with identical sequence B, C, D
ec nomenclature ec 3.4.13.9: Xaa-Pro dipeptidase.
pdb deposition date 2010-12-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3q6dA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3q6dA02
4RGZ1 4FUKA 2BWYA 4HXXA 2GG0A 1YW8A 1WL6A 4U6WA 1CHMA 4IKTA 2BHAA 4U6JA 1XGNA 5E2CA 4IF7A 3BITA 4S2TP 4U6ZA 5FCFA 5CNXA 2ADUA 1XGOA 2BHCA 3MATA 1B6AA 2GG2A 2BWTA 2NQ7A 2V3YA 3MR1A 2GGBA 2Q96A 3S6BA 4U6EA 3MX6A 2GA2A 4ZWOA 4IDYA 1N51A 4FKCA 1BN5A 4Z7MA 1W2MA 2Q8KA 3PKBA 1C24A 5CLSA 2BWSA 2GG3A 2B3LA 3FMQA 4JUQA 1KQ9A 1XGMA 2GG7A 2Q94A 4A6WA 1R5HA 1R5GA 1C21A 3Q6DA 4ZNGA 5JI6A 2BH3A 5CDEA 3RORA 1BOAA 4IPAA 2EA4A 5D6EA 1YW7A 1MATA 1WLRA 2P9AA 3D27A 3OOOA 4ZWUA 2BWXA 4S00A 5CIKA 3PKEA 4U1BA 4A6VA 2V3XA 2GZ5A 2BB7A 4S2RP 2GGCA 2GU6A 5CDLA 2V6CA 4IKSA 4IKUA 4U73A 1C27A 4MATA 5D6FA 4FLIA 2GU4A 3CTZA 2Q95A 1WY2A 2IW2A 2EVOA 4U75A 3TAVA 1JAWA 3QOCA 2V3ZA 4IKRA 2EVMA 1YVMA 4OOKA 5JFRA 1W7VA 3RVAA 1WN1A 4S01A 2BWWA 2GU7A 1R58A 5CDVA 2OAZA 4FLJA 3IG4A 4ZWPA 2HOWA 4IU6A 1KQ0A 3O5VA 1B59A 3L24A 3FMRA 1WL9A 3PN9A 2ZSGA 2B3HA 5FCHA 1O0XA 2GG8A 4U6CA 2MATA 3I7MA 1KP0A 1XGSA 2BN7A 1XNZA 3PKDA 4U71A 1WBQA 2OKNA 2NQ6A 3PKAA 2G6PA 3IU7A 1PV9A 3L7GA 4IECA 4FO7A 1Y1NA 5JHUA 2GG5A 2B3KA 2P99A 2GU5A 1YJ3A 4PV4A 2EVCA 1C23A 2EA2A 3PKCA 4FO8A 4KM3A 2BWVA 2P98A 2Q92A 1C22A 1A16A 4U70A 3CB6A 5E5BA 2BHDA 1YW9A 2GG9A 5CE6A 1QZYA 1QXZA 4R60A 2DFIA 1QXWA 1QXYA 1M35A 3IU8A 3IL0A 3OVKA 4FLLA 3CB5A 4B28A 4FLKA 4RZYA 1WKMA 2GTXA 4U69A 3PEBA 4RZZA 4PNCA 3TB5A 2BWUA 3FM3A 4EGEA 3BIPA 4QR8A 2BHBA 2Q93A 4U76A 3IU9A 3BIQA
chains in the Genus database with same CATH superfamily
4RGZ1 4FUKA 2BWYA 4HXXA 2GG0A 1YW8A 1WL6A 4U6WA 1CHMA 4IKTA 2BHAA 4U6JA 1XGNA 5E2CA 4IF7A 3BITA 4S2TP 4U6ZA 5FCFA 5CNXA 2ADUA 1XGOA 2BHCA 3MATA 1B6AA 2GG2A 2BWTA 2NQ7A 2V3YA 3MR1A 2GGBA 2Q96A 3S6BA 4U6EA 3MX6A 2GA2A 4ZWOA 4IDYA 1N51A 4FKCA 1BN5A 4Z7MA 1W2MA 2Q8KA 3PKBA 1C24A 5CLSA 2BWSA 2GG3A 2B3LA 3FMQA 4JUQA 1KQ9A 1XGMA 2GG7A 2Q94A 4A6WA 1R5HA 1R5GA 1C21A 3Q6DA 4ZNGA 5JI6A 2BH3A 5CDEA 3RORA 1BOAA 4IPAA 2EA4A 5D6EA 1YW7A 1MATA 1WLRA 2P9AA 3D27A 3OOOA 4ZWUA 2BWXA 4S00A 5CIKA 3PKEA 4U1BA 4A6VA 2V3XA 2GZ5A 2BB7A 4S2RP 2GGCA 2GU6A 5CDLA 2V6CA 4IKSA 4IKUA 4U73A 1C27A 4MATA 5D6FA 4FLIA 2GU4A 3CTZA 2Q95A 1WY2A 2IW2A 2EVOA 4U75A 3TAVA 1JAWA 3QOCA 2V3ZA 4IKRA 2EVMA 1YVMA 4OOKA 5JFRA 1W7VA 3RVAA 1WN1A 4S01A 2BWWA 2GU7A 1R58A 5CDVA 2OAZA 4FLJA 3IG4A 4ZWPA 2HOWA 4IU6A 1KQ0A 3O5VA 1B59A 3L24A 3FMRA 1WL9A 3PN9A 2ZSGA 2B3HA 5FCHA 1O0XA 2GG8A 4U6CA 2MATA 3I7MA 1KP0A 1XGSA 2BN7A 1XNZA 3PKDA 4U71A 1WBQA 2OKNA 2NQ6A 3PKAA 2G6PA 3IU7A 1PV9A 3L7GA 4IECA 4FO7A 1Y1NA 5JHUA 2GG5A 2B3KA 2P99A 2GU5A 1YJ3A 4PV4A 2EVCA 1C23A 2EA2A 3PKCA 4FO8A 4KM3A 2BWVA 2P98A 2Q92A 1C22A 1A16A 4U70A 3CB6A 5E5BA 2BHDA 1YW9A 2GG9A 5CE6A 1QZYA 1QXZA 4R60A 2DFIA 1QXWA 1QXYA 1M35A 3IU8A 3IL0A 3OVKA 4FLLA 3CB5A 4B28A 4FLKA 4RZYA 1WKMA 2GTXA 4U69A 3PEBA 4RZZA 4PNCA 3TB5A 2BWUA 3FM3A 4EGEA 3BIPA 4QR8A 2BHBA 2Q93A 4U76A 3IU9A 3BIQA
chains in the Genus database with same CATH topology
4RGZ1 4FUKA 2BWYA 4HXXA 2GG0A 1YW8A 1WL6A 4U6WA 1CHMA 4IKTA 2BHAA 4U6JA 1XGNA 5E2CA 4IF7A 3BITA 4S2TP 4U6ZA 5FCFA 5CNXA 2ADUA 1XGOA 2BHCA 3MATA 1B6AA 2GG2A 2BWTA 2NQ7A 2V3YA 3MR1A 2GGBA 2Q96A 3S6BA 4U6EA 3MX6A 2GA2A 4ZWOA 4IDYA 1N51A 4FKCA 1BN5A 4Z7MA 1W2MA 2Q8KA 3PKBA 1C24A 5CLSA 2BWSA 2GG3A 2B3LA 3FMQA 4JUQA 1KQ9A 1XGMA 2GG7A 2Q94A 4A6WA 1R5HA 1R5GA 1C21A 3Q6DA 4ZNGA 5JI6A 2BH3A 5CDEA 3RORA 1BOAA 4IPAA 2EA4A 5D6EA 1YW7A 1MATA 1WLRA 2P9AA 3D27A 3OOOA 4ZWUA 2BWXA 4S00A 5CIKA 3PKEA 4U1BA 4A6VA 2V3XA 2GZ5A 2BB7A 4S2RP 2GGCA 2GU6A 5CDLA 2V6CA 4IKSA 4IKUA 4U73A 1C27A 4MATA 5D6FA 4FLIA 2GU4A 3CTZA 2Q95A 1WY2A 2IW2A 2EVOA 4U75A 3TAVA 1JAWA 3QOCA 2V3ZA 4IKRA 2EVMA 1YVMA 4OOKA 5JFRA 1W7VA 3RVAA 1WN1A 4S01A 2BWWA 2GU7A 1R58A 5CDVA 2OAZA 4FLJA 3IG4A 4ZWPA 2HOWA 4IU6A 1KQ0A 3O5VA 1B59A 3L24A 3FMRA 1WL9A 3PN9A 2ZSGA 2B3HA 5FCHA 1O0XA 2GG8A 4U6CA 2MATA 3I7MA 1KP0A 1XGSA 2BN7A 1XNZA 3PKDA 4U71A 1WBQA 2OKNA 2NQ6A 3PKAA 2G6PA 3IU7A 1PV9A 3L7GA 4IECA 4FO7A 1Y1NA 5JHUA 2GG5A 2B3KA 2P99A 2GU5A 1YJ3A 4PV4A 2EVCA 1C23A 2EA2A 3PKCA 4FO8A 4KM3A 2BWVA 2P98A 2Q92A 1C22A 1A16A 4U70A 3CB6A 5E5BA 2BHDA 1YW9A 2GG9A 5CE6A 1QZYA 1QXZA 4R60A 2DFIA 1QXWA 1QXYA 1M35A 3IU8A 3IL0A 3OVKA 4FLLA 3CB5A 4B28A 4FLKA 4RZYA 1WKMA 2GTXA 4U69A 3PEBA 4RZZA 4PNCA 3TB5A 2BWUA 3FM3A 4EGEA 3BIPA 4QR8A 2BHBA 2Q93A 4U76A 3IU9A 3BIQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4RGZ 1;  4FUK A;  2BWY A;  4HXX A;  2GG0 A;  1YW8 A;  1WL6 A;  4U6W A;  1CHM A;  4IKT A;  2BHA A;  4U6J A;  1XGN A;  5E2C A;  4IF7 A;  3BIT A;  4S2T P;  4U6Z A;  5FCF A;  5CNX A;  2ADU A;  1XGO A;  2BHC A;  3MAT A;  1B6A A;  2GG2 A;  2BWT A;  2NQ7 A;  2V3Y A;  3MR1 A;  2GGB A;  2Q96 A;  3S6B A;  4U6E A;  3MX6 A;  2GA2 A;  4ZWO A;  4IDY A;  1N51 A;  4FKC A;  1BN5 A;  4Z7M A;  1W2M A;  2Q8K A;  3PKB A;  1C24 A;  5CLS A;  2BWS A;  2GG3 A;  2B3L A;  3FMQ A;  4JUQ A;  1KQ9 A;  1XGM A;  2GG7 A;  2Q94 A;  4A6W A;  1R5H A;  1R5G A;  1C21 A;  3Q6D A;  4ZNG A;  5JI6 A;  2BH3 A;  5CDE A;  3ROR A;  1BOA A;  4IPA A;  2EA4 A;  5D6E A;  1YW7 A;  1MAT A;  1WLR A;  2P9A A;  3D27 A;  3OOO A;  4ZWU A;  2BWX A;  4S00 A;  5CIK A;  3PKE A;  4U1B A;  4A6V A;  2V3X A;  2GZ5 A;  2BB7 A;  4S2R P;  2GGC A;  2GU6 A;  5CDL A;  2V6C A;  4IKS A;  4IKU A;  4U73 A;  1C27 A;  4MAT A;  5D6F A;  4FLI A;  2GU4 A;  3CTZ A;  2Q95 A;  1WY2 A;  2IW2 A;  2EVO A;  4U75 A;  3TAV A;  1JAW A;  3QOC A;  2V3Z A;  4IKR A;  2EVM A;  1YVM A;  4OOK A;  5JFR A;  1W7V A;  3RVA A;  1WN1 A;  4S01 A;  2BWW A;  2GU7 A;  1R58 A;  5CDV A;  2OAZ A;  4FLJ A;  3IG4 A;  4ZWP A;  2HOW A;  4IU6 A;  1KQ0 A;  3O5V A;  1B59 A;  3L24 A;  3FMR A;  1WL9 A;  3PN9 A;  2ZSG A;  2B3H A;  5FCH A;  1O0X A;  2GG8 A;  4U6C A;  2MAT A;  3I7M A;  1KP0 A;  1XGS A;  2BN7 A;  1XNZ A;  3PKD A;  4U71 A;  1WBQ A;  2OKN A;  2NQ6 A;  3PKA A;  2G6P A;  3IU7 A;  1PV9 A;  3L7G A;  4IEC A;  4FO7 A;  1Y1N A;  5JHU A;  2GG5 A;  2B3K A;  2P99 A;  2GU5 A;  1YJ3 A;  4PV4 A;  2EVC A;  1C23 A;  2EA2 A;  3PKC A;  4FO8 A;  4KM3 A;  2BWV A;  2P98 A;  2Q92 A;  1C22 A;  1A16 A;  4U70 A;  3CB6 A;  5E5B A;  2BHD A;  1YW9 A;  2GG9 A;  5CE6 A;  1QZY A;  1QXZ A;  4R60 A;  2DFI A;  1QXW A;  1QXY A;  1M35 A;  3IU8 A;  3IL0 A;  3OVK A;  4FLL A;  3CB5 A;  4B28 A;  4FLK A;  4RZY A;  1WKM A;  2GTX A;  4U69 A;  3PEB A;  4RZZ A;  4PNC A;  3TB5 A;  2BWU A;  3FM3 A;  4EGE A;  3BIP A;  4QR8 A;  2BHB A;  2Q93 A;  4U76 A;  3IU9 A;  3BIQ A; 
#chains in the Genus database with same CATH topology
 4RGZ 1;  4FUK A;  2BWY A;  4HXX A;  2GG0 A;  1YW8 A;  1WL6 A;  4U6W A;  1CHM A;  4IKT A;  2BHA A;  4U6J A;  1XGN A;  5E2C A;  4IF7 A;  3BIT A;  4S2T P;  4U6Z A;  5FCF A;  5CNX A;  2ADU A;  1XGO A;  2BHC A;  3MAT A;  1B6A A;  2GG2 A;  2BWT A;  2NQ7 A;  2V3Y A;  3MR1 A;  2GGB A;  2Q96 A;  3S6B A;  4U6E A;  3MX6 A;  2GA2 A;  4ZWO A;  4IDY A;  1N51 A;  4FKC A;  1BN5 A;  4Z7M A;  1W2M A;  2Q8K A;  3PKB A;  1C24 A;  5CLS A;  2BWS A;  2GG3 A;  2B3L A;  3FMQ A;  4JUQ A;  1KQ9 A;  1XGM A;  2GG7 A;  2Q94 A;  4A6W A;  1R5H A;  1R5G A;  1C21 A;  3Q6D A;  4ZNG A;  5JI6 A;  2BH3 A;  5CDE A;  3ROR A;  1BOA A;  4IPA A;  2EA4 A;  5D6E A;  1YW7 A;  1MAT A;  1WLR A;  2P9A A;  3D27 A;  3OOO A;  4ZWU A;  2BWX A;  4S00 A;  5CIK A;  3PKE A;  4U1B A;  4A6V A;  2V3X A;  2GZ5 A;  2BB7 A;  4S2R P;  2GGC A;  2GU6 A;  5CDL A;  2V6C A;  4IKS A;  4IKU A;  4U73 A;  1C27 A;  4MAT A;  5D6F A;  4FLI A;  2GU4 A;  3CTZ A;  2Q95 A;  1WY2 A;  2IW2 A;  2EVO A;  4U75 A;  3TAV A;  1JAW A;  3QOC A;  2V3Z A;  4IKR A;  2EVM A;  1YVM A;  4OOK A;  5JFR A;  1W7V A;  3RVA A;  1WN1 A;  4S01 A;  2BWW A;  2GU7 A;  1R58 A;  5CDV A;  2OAZ A;  4FLJ A;  3IG4 A;  4ZWP A;  2HOW A;  4IU6 A;  1KQ0 A;  3O5V A;  1B59 A;  3L24 A;  3FMR A;  1WL9 A;  3PN9 A;  2ZSG A;  2B3H A;  5FCH A;  1O0X A;  2GG8 A;  4U6C A;  2MAT A;  3I7M A;  1KP0 A;  1XGS A;  2BN7 A;  1XNZ A;  3PKD A;  4U71 A;  1WBQ A;  2OKN A;  2NQ6 A;  3PKA A;  2G6P A;  3IU7 A;  1PV9 A;  3L7G A;  4IEC A;  4FO7 A;  1Y1N A;  5JHU A;  2GG5 A;  2B3K A;  2P99 A;  2GU5 A;  1YJ3 A;  4PV4 A;  2EVC A;  1C23 A;  2EA2 A;  3PKC A;  4FO8 A;  4KM3 A;  2BWV A;  2P98 A;  2Q92 A;  1C22 A;  1A16 A;  4U70 A;  3CB6 A;  5E5B A;  2BHD A;  1YW9 A;  2GG9 A;  5CE6 A;  1QZY A;  1QXZ A;  4R60 A;  2DFI A;  1QXW A;  1QXY A;  1M35 A;  3IU8 A;  3IL0 A;  3OVK A;  4FLL A;  3CB5 A;  4B28 A;  4FLK A;  4RZY A;  1WKM A;  2GTX A;  4U69 A;  3PEB A;  4RZZ A;  4PNC A;  3TB5 A;  2BWU A;  3FM3 A;  4EGE A;  3BIP A;  4QR8 A;  2BHB A;  2Q93 A;  4U76 A;  3IU9 A;  3BIQ A; 
#chains in the Genus database with same CATH homology
 4RGZ 1;  4FUK A;  2BWY A;  4HXX A;  2GG0 A;  1YW8 A;  1WL6 A;  4U6W A;  1CHM A;  4IKT A;  2BHA A;  4U6J A;  1XGN A;  5E2C A;  4IF7 A;  3BIT A;  4S2T P;  4U6Z A;  5FCF A;  5CNX A;  2ADU A;  1XGO A;  2BHC A;  3MAT A;  1B6A A;  2GG2 A;  2BWT A;  2NQ7 A;  2V3Y A;  3MR1 A;  2GGB A;  2Q96 A;  3S6B A;  4U6E A;  3MX6 A;  2GA2 A;  4ZWO A;  4IDY A;  1N51 A;  4FKC A;  1BN5 A;  4Z7M A;  1W2M A;  2Q8K A;  3PKB A;  1C24 A;  5CLS A;  2BWS A;  2GG3 A;  2B3L A;  3FMQ A;  4JUQ A;  1KQ9 A;  1XGM A;  2GG7 A;  2Q94 A;  4A6W A;  1R5H A;  1R5G A;  1C21 A;  3Q6D A;  4ZNG A;  5JI6 A;  2BH3 A;  5CDE A;  3ROR A;  1BOA A;  4IPA A;  2EA4 A;  5D6E A;  1YW7 A;  1MAT A;  1WLR A;  2P9A A;  3D27 A;  3OOO A;  4ZWU A;  2BWX A;  4S00 A;  5CIK A;  3PKE A;  4U1B A;  4A6V A;  2V3X A;  2GZ5 A;  2BB7 A;  4S2R P;  2GGC A;  2GU6 A;  5CDL A;  2V6C A;  4IKS A;  4IKU A;  4U73 A;  1C27 A;  4MAT A;  5D6F A;  4FLI A;  2GU4 A;  3CTZ A;  2Q95 A;  1WY2 A;  2IW2 A;  2EVO A;  4U75 A;  3TAV A;  1JAW A;  3QOC A;  2V3Z A;  4IKR A;  2EVM A;  1YVM A;  4OOK A;  5JFR A;  1W7V A;  3RVA A;  1WN1 A;  4S01 A;  2BWW A;  2GU7 A;  1R58 A;  5CDV A;  2OAZ A;  4FLJ A;  3IG4 A;  4ZWP A;  2HOW A;  4IU6 A;  1KQ0 A;  3O5V A;  1B59 A;  3L24 A;  3FMR A;  1WL9 A;  3PN9 A;  2ZSG A;  2B3H A;  5FCH A;  1O0X A;  2GG8 A;  4U6C A;  2MAT A;  3I7M A;  1KP0 A;  1XGS A;  2BN7 A;  1XNZ A;  3PKD A;  4U71 A;  1WBQ A;  2OKN A;  2NQ6 A;  3PKA A;  2G6P A;  3IU7 A;  1PV9 A;  3L7G A;  4IEC A;  4FO7 A;  1Y1N A;  5JHU A;  2GG5 A;  2B3K A;  2P99 A;  2GU5 A;  1YJ3 A;  4PV4 A;  2EVC A;  1C23 A;  2EA2 A;  3PKC A;  4FO8 A;  4KM3 A;  2BWV A;  2P98 A;  2Q92 A;  1C22 A;  1A16 A;  4U70 A;  3CB6 A;  5E5B A;  2BHD A;  1YW9 A;  2GG9 A;  5CE6 A;  1QZY A;  1QXZ A;  4R60 A;  2DFI A;  1QXW A;  1QXY A;  1M35 A;  3IU8 A;  3IL0 A;  3OVK A;  4FLL A;  3CB5 A;  4B28 A;  4FLK A;  4RZY A;  1WKM A;  2GTX A;  4U69 A;  3PEB A;  4RZZ A;  4PNC A;  3TB5 A;  2BWU A;  3FM3 A;  4EGE A;  3BIP A;  4QR8 A;  2BHB A;  2Q93 A;  4U76 A;  3IU9 A;  3BIQ A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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