3Q6DA

Xaa-pro dipeptidase from bacillus anthracis.
Total Genus 126
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
126
sequence length
355
structure length
355
Chain Sequence
NAMEKIERLRSAFDEAGIDGILLTNEHSRRYMANFTGTAGVVLISKKRAQFITDFRYVEQASKQAVGYEIVQHAGLIIDEVAKQVKELGIQKLGFEQDTLTYSSYSAHKEAIDAEFIPTSGLVEKLRLIKTDSEIKILKEAAQIADAAFEHILSFIRPGVSEIEVSNELEFFMRKQGATSSSFDIIVASGLRSALPHGVASEKVIETGDFVTLDFGAYYKGYCSDITRTIAVGEPSDKLKEIYNIVLEAQLRGVNGIKAGLTGREADALTRDYITEKGYGEYFGHSTGHGIGLEIHEAPGLAFRSDTVLEPGMAVTVEPGIYIPGIGGVRIEDDIIVTSEGNEVITKSPKELIIL
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Proline dipeptidase
publication title Xaa-Pro dipeptidase from Bacillus anthracis.
rcsb
source organism Bacillus anthracis
molecule tags Viral protein
total genus 126
structure length 355
sequence length 355
chains with identical sequence B, C, D
ec nomenclature ec 3.4.13.9: Xaa-Pro dipeptidase.
pdb deposition date 2010-12-31

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF01321 Creatinase_N Creatinase/Prolidase N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 3q6dA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 3q6dA02
2BWYA 2EVOA 4U6WA 2ADUA 4U6EA 3L24A 4S2TP 2GU7A 4RZYA 2Q93A 4HXXA 2GU5A 2BN7A 1WL6A 3IL0A 2GG5A 3RORA 3MATA 2DFIA 5FCFA 1B59A 2GZ5A 4U75A 4IKSA 2V6CA 1MATA 5E2CA 1YW9A 3D27A 5CNXA 3S6BA 4R60A 3OVKA 1WY2A 4OOKA 3PKDA 2GG7A 2Q94A 2GG0A 3CTZA 2GTXA 2EA2A 2BHAA 3I7MA 1C24A 2NQ6A 4JUQA 3PEBA 1R5HA 2P9AA 3TB5A 2BWUA 2BWXA 1C22A 1YJ3A 1WKMA 2Q96A 3RVAA 1KP0A 1WLRA 4ZWOA 1XGOA 1XNZA 2OKNA 1KQ0A 4IKRA 5E5BA 5JI6A 1QXZA 3L7GA 2IW2A 3BIQA 4S01A 1XGNA 2P98A 3IU8A 2V3YA 1C21A 4KM3A 4FO8A 3MX6A 2NQ7A 4QR8A 4IU6A 2MATA 3QOCA 4ZNGA 2BWTA 4ZWPA 2EVCA 2GA2A 1C27A 3OOOA 1QZYA 1JAWA 4FUKA 1BOAA 3PKBA 1W7VA 2BWSA 3MR1A 4U1BA 4IPAA 4PNCA 5JHUA 4RZZA 2BWWA 2B3HA 3PKEA 2BHBA 4U6CA 3CB5A 2V3ZA 4U69A 5CIKA 4IKUA 2HOWA 3Q6DA 1O0XA 2GG2A 4MATA 2B3KA 2Q95A 4U6ZA 4S2RP 4FLKA 1M35A 1A16A 2EVMA 1W2MA 3PKAA 1CHMA 2BWVA 3FMRA 5CLSA 1WL9A 1R5GA 4IECA 3CB6A 4IF7A 5D6FA 4FKCA 1WN1A 1XGSA 4IDYA 3O5VA 2BHDA 4U70A 5JFRA 3IU7A 1QXWA 2BB7A 1YW7A 2GU6A 1N51A 4IKTA 5CDLA 1WBQA 2GG9A 3BIPA 2BHCA 4RGZ1 3TAVA 1YVMA 2Q92A 1PV9A 4A6WA 2V3XA 3FM3A 1YW8A 3IG4A 2EA4A 5D6EA 3BITA 4FLJA 5FCHA 2GG3A 4FO7A 2P99A 4EGEA 4U71A 2GU4A 3IU9A 1B6AA 4FLIA 2GG8A 1Y1NA 2OAZA 2G6PA 4U6JA 4Z7MA 2ZSGA 5CDVA 1KQ9A 4ZWUA 5CE6A 1BN5A 3PN9A 1R58A 4A6VA 1C23A 1XGMA 5CDEA 3PKCA 4U76A 1QXYA 2Q8KA 2BH3A 2GGCA 4B28A 2B3LA 4S00A 4FLLA 3FMQA 4U73A 2GGBA 4PV4A
chains in the Genus database with same CATH superfamily
2BWYA 2EVOA 4U6WA 2ADUA 4U6EA 3L24A 4S2TP 2GU7A 4RZYA 2Q93A 4HXXA 2GU5A 2BN7A 1WL6A 3IL0A 2GG5A 3RORA 3MATA 2DFIA 5FCFA 1B59A 2GZ5A 4U75A 4IKSA 2V6CA 1MATA 5E2CA 1YW9A 3D27A 5CNXA 3S6BA 4R60A 3OVKA 1WY2A 4OOKA 3PKDA 2GG7A 2Q94A 2GG0A 3CTZA 2GTXA 2EA2A 2BHAA 3I7MA 1C24A 2NQ6A 4JUQA 3PEBA 1R5HA 2P9AA 3TB5A 2BWUA 2BWXA 1C22A 1YJ3A 1WKMA 2Q96A 3RVAA 1KP0A 1WLRA 4ZWOA 1XGOA 1XNZA 2OKNA 1KQ0A 4IKRA 5E5BA 5JI6A 1QXZA 3L7GA 2IW2A 3BIQA 4S01A 1XGNA 2P98A 3IU8A 2V3YA 1C21A 4KM3A 4FO8A 3MX6A 2NQ7A 4QR8A 4IU6A 2MATA 3QOCA 4ZNGA 2BWTA 4ZWPA 2EVCA 2GA2A 1C27A 3OOOA 1QZYA 1JAWA 4FUKA 1BOAA 3PKBA 1W7VA 2BWSA 3MR1A 4U1BA 4IPAA 4PNCA 5JHUA 4RZZA 2BWWA 2B3HA 3PKEA 2BHBA 4U6CA 3CB5A 2V3ZA 4U69A 5CIKA 4IKUA 2HOWA 3Q6DA 1O0XA 2GG2A 4MATA 2B3KA 2Q95A 4U6ZA 4S2RP 4FLKA 1M35A 1A16A 2EVMA 1W2MA 3PKAA 1CHMA 2BWVA 3FMRA 5CLSA 1WL9A 1R5GA 4IECA 3CB6A 4IF7A 5D6FA 4FKCA 1WN1A 1XGSA 4IDYA 3O5VA 2BHDA 4U70A 5JFRA 3IU7A 1QXWA 2BB7A 1YW7A 2GU6A 1N51A 4IKTA 5CDLA 1WBQA 2GG9A 3BIPA 2BHCA 4RGZ1 3TAVA 1YVMA 2Q92A 1PV9A 4A6WA 2V3XA 3FM3A 1YW8A 3IG4A 2EA4A 5D6EA 3BITA 4FLJA 5FCHA 2GG3A 4FO7A 2P99A 4EGEA 4U71A 2GU4A 3IU9A 1B6AA 4FLIA 2GG8A 1Y1NA 2OAZA 2G6PA 4U6JA 4Z7MA 2ZSGA 5CDVA 1KQ9A 4ZWUA 5CE6A 1BN5A 3PN9A 1R58A 4A6VA 1C23A 1XGMA 5CDEA 3PKCA 4U76A 1QXYA 2Q8KA 2BH3A 2GGCA 4B28A 2B3LA 4S00A 4FLLA 3FMQA 4U73A 2GGBA 4PV4A
chains in the Genus database with same CATH topology
2BWYA 2EVOA 4U6WA 2ADUA 4U6EA 3L24A 4S2TP 2GU7A 4RZYA 2Q93A 4HXXA 2GU5A 2BN7A 1WL6A 3IL0A 2GG5A 3RORA 3MATA 2DFIA 5FCFA 1B59A 2GZ5A 4U75A 4IKSA 2V6CA 1MATA 5E2CA 1YW9A 3D27A 5CNXA 3S6BA 4R60A 3OVKA 1WY2A 4OOKA 3PKDA 2GG7A 2Q94A 2GG0A 3CTZA 2GTXA 2EA2A 2BHAA 3I7MA 1C24A 2NQ6A 4JUQA 3PEBA 1R5HA 2P9AA 3TB5A 2BWUA 2BWXA 1C22A 1YJ3A 1WKMA 2Q96A 3RVAA 1KP0A 1WLRA 4ZWOA 1XGOA 1XNZA 2OKNA 1KQ0A 4IKRA 5E5BA 5JI6A 1QXZA 3L7GA 2IW2A 3BIQA 4S01A 1XGNA 2P98A 3IU8A 2V3YA 1C21A 4KM3A 4FO8A 3MX6A 2NQ7A 4QR8A 4IU6A 2MATA 3QOCA 4ZNGA 2BWTA 4ZWPA 2EVCA 2GA2A 1C27A 3OOOA 1QZYA 1JAWA 4FUKA 1BOAA 3PKBA 1W7VA 2BWSA 3MR1A 4U1BA 4IPAA 4PNCA 5JHUA 4RZZA 2BWWA 2B3HA 3PKEA 2BHBA 4U6CA 3CB5A 2V3ZA 4U69A 5CIKA 4IKUA 2HOWA 3Q6DA 1O0XA 2GG2A 4MATA 2B3KA 2Q95A 4U6ZA 4S2RP 4FLKA 1M35A 1A16A 2EVMA 1W2MA 3PKAA 1CHMA 2BWVA 3FMRA 5CLSA 1WL9A 1R5GA 4IECA 3CB6A 4IF7A 5D6FA 4FKCA 1WN1A 1XGSA 4IDYA 3O5VA 2BHDA 4U70A 5JFRA 3IU7A 1QXWA 2BB7A 1YW7A 2GU6A 1N51A 4IKTA 5CDLA 1WBQA 2GG9A 3BIPA 2BHCA 4RGZ1 3TAVA 1YVMA 2Q92A 1PV9A 4A6WA 2V3XA 3FM3A 1YW8A 3IG4A 2EA4A 5D6EA 3BITA 4FLJA 5FCHA 2GG3A 4FO7A 2P99A 4EGEA 4U71A 2GU4A 3IU9A 1B6AA 4FLIA 2GG8A 1Y1NA 2OAZA 2G6PA 4U6JA 4Z7MA 2ZSGA 5CDVA 1KQ9A 4ZWUA 5CE6A 1BN5A 3PN9A 1R58A 4A6VA 1C23A 1XGMA 5CDEA 3PKCA 4U76A 1QXYA 2Q8KA 2BH3A 2GGCA 4B28A 2B3LA 4S00A 4FLLA 3FMQA 4U73A 2GGBA 4PV4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2BWY A;  2EVO A;  4U6W A;  2ADU A;  4U6E A;  3L24 A;  4S2T P;  2GU7 A;  4RZY A;  2Q93 A;  4HXX A;  2GU5 A;  2BN7 A;  1WL6 A;  3IL0 A;  2GG5 A;  3ROR A;  3MAT A;  2DFI A;  5FCF A;  1B59 A;  2GZ5 A;  4U75 A;  4IKS A;  2V6C A;  1MAT A;  5E2C A;  1YW9 A;  3D27 A;  5CNX A;  3S6B A;  4R60 A;  3OVK A;  1WY2 A;  4OOK A;  3PKD A;  2GG7 A;  2Q94 A;  2GG0 A;  3CTZ A;  2GTX A;  2EA2 A;  2BHA A;  3I7M A;  1C24 A;  2NQ6 A;  4JUQ A;  3PEB A;  1R5H A;  2P9A A;  3TB5 A;  2BWU A;  2BWX A;  1C22 A;  1YJ3 A;  1WKM A;  2Q96 A;  3RVA A;  1KP0 A;  1WLR A;  4ZWO A;  1XGO A;  1XNZ A;  2OKN A;  1KQ0 A;  4IKR A;  5E5B A;  5JI6 A;  1QXZ A;  3L7G A;  2IW2 A;  3BIQ A;  4S01 A;  1XGN A;  2P98 A;  3IU8 A;  2V3Y A;  1C21 A;  4KM3 A;  4FO8 A;  3MX6 A;  2NQ7 A;  4QR8 A;  4IU6 A;  2MAT A;  3QOC A;  4ZNG A;  2BWT A;  4ZWP A;  2EVC A;  2GA2 A;  1C27 A;  3OOO A;  1QZY A;  1JAW A;  4FUK A;  1BOA A;  3PKB A;  1W7V A;  2BWS A;  3MR1 A;  4U1B A;  4IPA A;  4PNC A;  5JHU A;  4RZZ A;  2BWW A;  2B3H A;  3PKE A;  2BHB A;  4U6C A;  3CB5 A;  2V3Z A;  4U69 A;  5CIK A;  4IKU A;  2HOW A;  3Q6D A;  1O0X A;  2GG2 A;  4MAT A;  2B3K A;  2Q95 A;  4U6Z A;  4S2R P;  4FLK A;  1M35 A;  1A16 A;  2EVM A;  1W2M A;  3PKA A;  1CHM A;  2BWV A;  3FMR A;  5CLS A;  1WL9 A;  1R5G A;  4IEC A;  3CB6 A;  4IF7 A;  5D6F A;  4FKC A;  1WN1 A;  1XGS A;  4IDY A;  3O5V A;  2BHD A;  4U70 A;  5JFR A;  3IU7 A;  1QXW A;  2BB7 A;  1YW7 A;  2GU6 A;  1N51 A;  4IKT A;  5CDL A;  1WBQ A;  2GG9 A;  3BIP A;  2BHC A;  4RGZ 1;  3TAV A;  1YVM A;  2Q92 A;  1PV9 A;  4A6W A;  2V3X A;  3FM3 A;  1YW8 A;  3IG4 A;  2EA4 A;  5D6E A;  3BIT A;  4FLJ A;  5FCH A;  2GG3 A;  4FO7 A;  2P99 A;  4EGE A;  4U71 A;  2GU4 A;  3IU9 A;  1B6A A;  4FLI A;  2GG8 A;  1Y1N A;  2OAZ A;  2G6P A;  4U6J A;  4Z7M A;  2ZSG A;  5CDV A;  1KQ9 A;  4ZWU A;  5CE6 A;  1BN5 A;  3PN9 A;  1R58 A;  4A6V A;  1C23 A;  1XGM A;  5CDE A;  3PKC A;  4U76 A;  1QXY A;  2Q8K A;  2BH3 A;  2GGC A;  4B28 A;  2B3L A;  4S00 A;  4FLL A;  3FMQ A;  4U73 A;  2GGB A;  4PV4 A; 
#chains in the Genus database with same CATH topology
 2BWY A;  2EVO A;  4U6W A;  2ADU A;  4U6E A;  3L24 A;  4S2T P;  2GU7 A;  4RZY A;  2Q93 A;  4HXX A;  2GU5 A;  2BN7 A;  1WL6 A;  3IL0 A;  2GG5 A;  3ROR A;  3MAT A;  2DFI A;  5FCF A;  1B59 A;  2GZ5 A;  4U75 A;  4IKS A;  2V6C A;  1MAT A;  5E2C A;  1YW9 A;  3D27 A;  5CNX A;  3S6B A;  4R60 A;  3OVK A;  1WY2 A;  4OOK A;  3PKD A;  2GG7 A;  2Q94 A;  2GG0 A;  3CTZ A;  2GTX A;  2EA2 A;  2BHA A;  3I7M A;  1C24 A;  2NQ6 A;  4JUQ A;  3PEB A;  1R5H A;  2P9A A;  3TB5 A;  2BWU A;  2BWX A;  1C22 A;  1YJ3 A;  1WKM A;  2Q96 A;  3RVA A;  1KP0 A;  1WLR A;  4ZWO A;  1XGO A;  1XNZ A;  2OKN A;  1KQ0 A;  4IKR A;  5E5B A;  5JI6 A;  1QXZ A;  3L7G A;  2IW2 A;  3BIQ A;  4S01 A;  1XGN A;  2P98 A;  3IU8 A;  2V3Y A;  1C21 A;  4KM3 A;  4FO8 A;  3MX6 A;  2NQ7 A;  4QR8 A;  4IU6 A;  2MAT A;  3QOC A;  4ZNG A;  2BWT A;  4ZWP A;  2EVC A;  2GA2 A;  1C27 A;  3OOO A;  1QZY A;  1JAW A;  4FUK A;  1BOA A;  3PKB A;  1W7V A;  2BWS A;  3MR1 A;  4U1B A;  4IPA A;  4PNC A;  5JHU A;  4RZZ A;  2BWW A;  2B3H A;  3PKE A;  2BHB A;  4U6C A;  3CB5 A;  2V3Z A;  4U69 A;  5CIK A;  4IKU A;  2HOW A;  3Q6D A;  1O0X A;  2GG2 A;  4MAT A;  2B3K A;  2Q95 A;  4U6Z A;  4S2R P;  4FLK A;  1M35 A;  1A16 A;  2EVM A;  1W2M A;  3PKA A;  1CHM A;  2BWV A;  3FMR A;  5CLS A;  1WL9 A;  1R5G A;  4IEC A;  3CB6 A;  4IF7 A;  5D6F A;  4FKC A;  1WN1 A;  1XGS A;  4IDY A;  3O5V A;  2BHD A;  4U70 A;  5JFR A;  3IU7 A;  1QXW A;  2BB7 A;  1YW7 A;  2GU6 A;  1N51 A;  4IKT A;  5CDL A;  1WBQ A;  2GG9 A;  3BIP A;  2BHC A;  4RGZ 1;  3TAV A;  1YVM A;  2Q92 A;  1PV9 A;  4A6W A;  2V3X A;  3FM3 A;  1YW8 A;  3IG4 A;  2EA4 A;  5D6E A;  3BIT A;  4FLJ A;  5FCH A;  2GG3 A;  4FO7 A;  2P99 A;  4EGE A;  4U71 A;  2GU4 A;  3IU9 A;  1B6A A;  4FLI A;  2GG8 A;  1Y1N A;  2OAZ A;  2G6P A;  4U6J A;  4Z7M A;  2ZSG A;  5CDV A;  1KQ9 A;  4ZWU A;  5CE6 A;  1BN5 A;  3PN9 A;  1R58 A;  4A6V A;  1C23 A;  1XGM A;  5CDE A;  3PKC A;  4U76 A;  1QXY A;  2Q8K A;  2BH3 A;  2GGC A;  4B28 A;  2B3L A;  4S00 A;  4FLL A;  3FMQ A;  4U73 A;  2GGB A;  4PV4 A; 
#chains in the Genus database with same CATH homology
 2BWY A;  2EVO A;  4U6W A;  2ADU A;  4U6E A;  3L24 A;  4S2T P;  2GU7 A;  4RZY A;  2Q93 A;  4HXX A;  2GU5 A;  2BN7 A;  1WL6 A;  3IL0 A;  2GG5 A;  3ROR A;  3MAT A;  2DFI A;  5FCF A;  1B59 A;  2GZ5 A;  4U75 A;  4IKS A;  2V6C A;  1MAT A;  5E2C A;  1YW9 A;  3D27 A;  5CNX A;  3S6B A;  4R60 A;  3OVK A;  1WY2 A;  4OOK A;  3PKD A;  2GG7 A;  2Q94 A;  2GG0 A;  3CTZ A;  2GTX A;  2EA2 A;  2BHA A;  3I7M A;  1C24 A;  2NQ6 A;  4JUQ A;  3PEB A;  1R5H A;  2P9A A;  3TB5 A;  2BWU A;  2BWX A;  1C22 A;  1YJ3 A;  1WKM A;  2Q96 A;  3RVA A;  1KP0 A;  1WLR A;  4ZWO A;  1XGO A;  1XNZ A;  2OKN A;  1KQ0 A;  4IKR A;  5E5B A;  5JI6 A;  1QXZ A;  3L7G A;  2IW2 A;  3BIQ A;  4S01 A;  1XGN A;  2P98 A;  3IU8 A;  2V3Y A;  1C21 A;  4KM3 A;  4FO8 A;  3MX6 A;  2NQ7 A;  4QR8 A;  4IU6 A;  2MAT A;  3QOC A;  4ZNG A;  2BWT A;  4ZWP A;  2EVC A;  2GA2 A;  1C27 A;  3OOO A;  1QZY A;  1JAW A;  4FUK A;  1BOA A;  3PKB A;  1W7V A;  2BWS A;  3MR1 A;  4U1B A;  4IPA A;  4PNC A;  5JHU A;  4RZZ A;  2BWW A;  2B3H A;  3PKE A;  2BHB A;  4U6C A;  3CB5 A;  2V3Z A;  4U69 A;  5CIK A;  4IKU A;  2HOW A;  3Q6D A;  1O0X A;  2GG2 A;  4MAT A;  2B3K A;  2Q95 A;  4U6Z A;  4S2R P;  4FLK A;  1M35 A;  1A16 A;  2EVM A;  1W2M A;  3PKA A;  1CHM A;  2BWV A;  3FMR A;  5CLS A;  1WL9 A;  1R5G A;  4IEC A;  3CB6 A;  4IF7 A;  5D6F A;  4FKC A;  1WN1 A;  1XGS A;  4IDY A;  3O5V A;  2BHD A;  4U70 A;  5JFR A;  3IU7 A;  1QXW A;  2BB7 A;  1YW7 A;  2GU6 A;  1N51 A;  4IKT A;  5CDL A;  1WBQ A;  2GG9 A;  3BIP A;  2BHC A;  4RGZ 1;  3TAV A;  1YVM A;  2Q92 A;  1PV9 A;  4A6W A;  2V3X A;  3FM3 A;  1YW8 A;  3IG4 A;  2EA4 A;  5D6E A;  3BIT A;  4FLJ A;  5FCH A;  2GG3 A;  4FO7 A;  2P99 A;  4EGE A;  4U71 A;  2GU4 A;  3IU9 A;  1B6A A;  4FLI A;  2GG8 A;  1Y1N A;  2OAZ A;  2G6P A;  4U6J A;  4Z7M A;  2ZSG A;  5CDV A;  1KQ9 A;  4ZWU A;  5CE6 A;  1BN5 A;  3PN9 A;  1R58 A;  4A6V A;  1C23 A;  1XGM A;  5CDE A;  3PKC A;  4U76 A;  1QXY A;  2Q8K A;  2BH3 A;  2GGC A;  4B28 A;  2B3L A;  4S00 A;  4FLL A;  3FMQ A;  4U73 A;  2GGB A;  4PV4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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