4PV4A

Proline aminopeptidase p ii from yersinia pestis
Total Genus 158
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
436
structure length
436
Chain Sequence
MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRIRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCILHYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLTLFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTASVVKDPDDIEALMALN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Proline aminopeptidase P II
publication title Proline aminopeptidase P II from Yersinia pestis
rcsb
source organism Yersinia pestis
molecule tags Hydrolase
total genus 158
structure length 436
sequence length 436
chains with identical sequence B
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2014-03-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 4pv4A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4pv4A02
2OKNA 2Q94A 4QR8A 1N51A 5CDVA 1MATA 3PKEA 2BWSA 1XGSA 5CDLA 1JAWA 1BOAA 2P9AA 1O0XA 4ZWUA 1C27A 2GTXA 2GA2A 3TAVA 1YVMA 2BHBA 1YW8A 3PKCA 4EGEA 2P98A 3CTZA 1B6AA 1R5HA 4U6ZA 1M35A 3TB5A 1QZYA 1KP0A 3OOOA 4RZYA 1QXWA 3QOCA 4FLLA 2GZ5A 1WKMA 2GU5A 4KM3A 3FMRA 5JI6A 4FO8A 2GG7A 2V3YA 3CB5A 3BITA 1Y1NA 3FMQA 3MR1A 2V3XA 1C22A 5E5BA 1PV9A 4U73A 1WL9A 1YJ3A 3MX6A 3PEBA 4S00A 2V3ZA 1XGNA 2GGCA 2BHAA 4IPAA 3FM3A 4FLIA 4JUQA 2G6PA 3I7MA 2BHCA 2EVCA 5CIKA 5CNXA 2EVOA 1WL6A 4S2TP 4ZNGA 5CE6A 2Q93A 4PV4A 2MATA 3IU9A 3PN9A 5CDEA 3RVAA 3IU7A 4HXXA 3L7GA 2GG8A 2DFIA 3PKDA 4U1BA 1XNZA 5FCFA 4IU6A 4U70A 2V6CA 4FUKA 5CLSA 2Q8KA 4OOKA 4IKUA 3MATA 5D6FA 2BN7A 3PKBA 2BWYA 2B3HA 4U69A 4ZWPA 1BN5A 4RGZ1 4IF7A 1XGMA 4FLKA 2EVMA 3D27A 4S2RP 2BH3A 3CB6A 4FO7A 4A6VA 2IW2A 5JFRA 1W7VA 1C21A 1WN1A 1KQ0A 2Q96A 2GU6A 2EA2A 3S6BA 4A6WA 3PKAA 2GGBA 4U71A 1KQ9A 3IU8A 1WY2A 2BWWA 1W2MA 1QXZA 1R5GA 4U6EA 5E2CA 1C23A 4MATA 2GG3A 2GU4A 2GG9A 4Z7MA 2BB7A 4U76A 3BIPA 1A16A 1YW9A 2ADUA 2BWXA 1QXYA 4PNCA 4U6CA 3RORA 4ZWOA 2P99A 1WLRA 2B3LA 2BWVA 4IKSA 3O5VA 4FKCA 4U75A 3IG4A 3BIQA 4R60A 1XGOA 3OVKA 1WBQA 2OAZA 2B3KA 3L24A 1CHMA 4IECA 1R58A 5JHUA 2BHDA 2HOWA 5D6EA 4RZZA 1C24A 4B28A 1YW7A 4IKRA 2GG2A 3IL0A 5FCHA 2Q95A 3Q6DA 2NQ6A 4U6JA 2EA4A 4S01A 1B59A 2GG0A 2ZSGA 4FLJA 4U6WA 2Q92A 4IDYA 2NQ7A 2BWTA 2GG5A 2GU7A 2BWUA 4IKTA
chains in the Genus database with same CATH superfamily
2OKNA 2Q94A 4QR8A 1N51A 5CDVA 1MATA 3PKEA 2BWSA 1XGSA 5CDLA 1JAWA 1BOAA 2P9AA 1O0XA 4ZWUA 1C27A 2GTXA 2GA2A 3TAVA 1YVMA 2BHBA 1YW8A 3PKCA 4EGEA 2P98A 3CTZA 1B6AA 1R5HA 4U6ZA 1M35A 3TB5A 1QZYA 1KP0A 3OOOA 4RZYA 1QXWA 3QOCA 4FLLA 2GZ5A 1WKMA 2GU5A 4KM3A 3FMRA 5JI6A 4FO8A 2GG7A 2V3YA 3CB5A 3BITA 1Y1NA 3FMQA 3MR1A 2V3XA 1C22A 5E5BA 1PV9A 4U73A 1WL9A 1YJ3A 3MX6A 3PEBA 4S00A 2V3ZA 1XGNA 2GGCA 2BHAA 4IPAA 3FM3A 4FLIA 4JUQA 2G6PA 3I7MA 2BHCA 2EVCA 5CIKA 5CNXA 2EVOA 1WL6A 4S2TP 4ZNGA 5CE6A 2Q93A 4PV4A 2MATA 3IU9A 3PN9A 5CDEA 3RVAA 3IU7A 4HXXA 3L7GA 2GG8A 2DFIA 3PKDA 4U1BA 1XNZA 5FCFA 4IU6A 4U70A 2V6CA 4FUKA 5CLSA 2Q8KA 4OOKA 4IKUA 3MATA 5D6FA 2BN7A 3PKBA 2BWYA 2B3HA 4U69A 4ZWPA 1BN5A 4RGZ1 4IF7A 1XGMA 4FLKA 2EVMA 3D27A 4S2RP 2BH3A 3CB6A 4FO7A 4A6VA 2IW2A 5JFRA 1W7VA 1C21A 1WN1A 1KQ0A 2Q96A 2GU6A 2EA2A 3S6BA 4A6WA 3PKAA 2GGBA 4U71A 1KQ9A 3IU8A 1WY2A 2BWWA 1W2MA 1QXZA 1R5GA 4U6EA 5E2CA 1C23A 4MATA 2GG3A 2GU4A 2GG9A 4Z7MA 2BB7A 4U76A 3BIPA 1A16A 1YW9A 2ADUA 2BWXA 1QXYA 4PNCA 4U6CA 3RORA 4ZWOA 2P99A 1WLRA 2B3LA 2BWVA 4IKSA 3O5VA 4FKCA 4U75A 3IG4A 3BIQA 4R60A 1XGOA 3OVKA 1WBQA 2OAZA 2B3KA 3L24A 1CHMA 4IECA 1R58A 5JHUA 2BHDA 2HOWA 5D6EA 4RZZA 1C24A 4B28A 1YW7A 4IKRA 2GG2A 3IL0A 5FCHA 2Q95A 3Q6DA 2NQ6A 4U6JA 2EA4A 4S01A 1B59A 2GG0A 2ZSGA 4FLJA 4U6WA 2Q92A 4IDYA 2NQ7A 2BWTA 2GG5A 2GU7A 2BWUA 4IKTA
chains in the Genus database with same CATH topology
2OKNA 2Q94A 4QR8A 1N51A 5CDVA 1MATA 3PKEA 2BWSA 1XGSA 5CDLA 1JAWA 1BOAA 2P9AA 1O0XA 4ZWUA 1C27A 2GTXA 2GA2A 3TAVA 1YVMA 2BHBA 1YW8A 3PKCA 4EGEA 2P98A 3CTZA 1B6AA 1R5HA 4U6ZA 1M35A 3TB5A 1QZYA 1KP0A 3OOOA 4RZYA 1QXWA 3QOCA 4FLLA 2GZ5A 1WKMA 2GU5A 4KM3A 3FMRA 5JI6A 4FO8A 2GG7A 2V3YA 3CB5A 3BITA 1Y1NA 3FMQA 3MR1A 2V3XA 1C22A 5E5BA 1PV9A 4U73A 1WL9A 1YJ3A 3MX6A 3PEBA 4S00A 2V3ZA 1XGNA 2GGCA 2BHAA 4IPAA 3FM3A 4FLIA 4JUQA 2G6PA 3I7MA 2BHCA 2EVCA 5CIKA 5CNXA 2EVOA 1WL6A 4S2TP 4ZNGA 5CE6A 2Q93A 4PV4A 2MATA 3IU9A 3PN9A 5CDEA 3RVAA 3IU7A 4HXXA 3L7GA 2GG8A 2DFIA 3PKDA 4U1BA 1XNZA 5FCFA 4IU6A 4U70A 2V6CA 4FUKA 5CLSA 2Q8KA 4OOKA 4IKUA 3MATA 5D6FA 2BN7A 3PKBA 2BWYA 2B3HA 4U69A 4ZWPA 1BN5A 4RGZ1 4IF7A 1XGMA 4FLKA 2EVMA 3D27A 4S2RP 2BH3A 3CB6A 4FO7A 4A6VA 2IW2A 5JFRA 1W7VA 1C21A 1WN1A 1KQ0A 2Q96A 2GU6A 2EA2A 3S6BA 4A6WA 3PKAA 2GGBA 4U71A 1KQ9A 3IU8A 1WY2A 2BWWA 1W2MA 1QXZA 1R5GA 4U6EA 5E2CA 1C23A 4MATA 2GG3A 2GU4A 2GG9A 4Z7MA 2BB7A 4U76A 3BIPA 1A16A 1YW9A 2ADUA 2BWXA 1QXYA 4PNCA 4U6CA 3RORA 4ZWOA 2P99A 1WLRA 2B3LA 2BWVA 4IKSA 3O5VA 4FKCA 4U75A 3IG4A 3BIQA 4R60A 1XGOA 3OVKA 1WBQA 2OAZA 2B3KA 3L24A 1CHMA 4IECA 1R58A 5JHUA 2BHDA 2HOWA 5D6EA 4RZZA 1C24A 4B28A 1YW7A 4IKRA 2GG2A 3IL0A 5FCHA 2Q95A 3Q6DA 2NQ6A 4U6JA 2EA4A 4S01A 1B59A 2GG0A 2ZSGA 4FLJA 4U6WA 2Q92A 4IDYA 2NQ7A 2BWTA 2GG5A 2GU7A 2BWUA 4IKTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2OKN A;  2Q94 A;  4QR8 A;  1N51 A;  5CDV A;  1MAT A;  3PKE A;  2BWS A;  1XGS A;  5CDL A;  1JAW A;  1BOA A;  2P9A A;  1O0X A;  4ZWU A;  1C27 A;  2GTX A;  2GA2 A;  3TAV A;  1YVM A;  2BHB A;  1YW8 A;  3PKC A;  4EGE A;  2P98 A;  3CTZ A;  1B6A A;  1R5H A;  4U6Z A;  1M35 A;  3TB5 A;  1QZY A;  1KP0 A;  3OOO A;  4RZY A;  1QXW A;  3QOC A;  4FLL A;  2GZ5 A;  1WKM A;  2GU5 A;  4KM3 A;  3FMR A;  5JI6 A;  4FO8 A;  2GG7 A;  2V3Y A;  3CB5 A;  3BIT A;  1Y1N A;  3FMQ A;  3MR1 A;  2V3X A;  1C22 A;  5E5B A;  1PV9 A;  4U73 A;  1WL9 A;  1YJ3 A;  3MX6 A;  3PEB A;  4S00 A;  2V3Z A;  1XGN A;  2GGC A;  2BHA A;  4IPA A;  3FM3 A;  4FLI A;  4JUQ A;  2G6P A;  3I7M A;  2BHC A;  2EVC A;  5CIK A;  5CNX A;  2EVO A;  1WL6 A;  4S2T P;  4ZNG A;  5CE6 A;  2Q93 A;  4PV4 A;  2MAT A;  3IU9 A;  3PN9 A;  5CDE A;  3RVA A;  3IU7 A;  4HXX A;  3L7G A;  2GG8 A;  2DFI A;  3PKD A;  4U1B A;  1XNZ A;  5FCF A;  4IU6 A;  4U70 A;  2V6C A;  4FUK A;  5CLS A;  2Q8K A;  4OOK A;  4IKU A;  3MAT A;  5D6F A;  2BN7 A;  3PKB A;  2BWY A;  2B3H A;  4U69 A;  4ZWP A;  1BN5 A;  4RGZ 1;  4IF7 A;  1XGM A;  4FLK A;  2EVM A;  3D27 A;  4S2R P;  2BH3 A;  3CB6 A;  4FO7 A;  4A6V A;  2IW2 A;  5JFR A;  1W7V A;  1C21 A;  1WN1 A;  1KQ0 A;  2Q96 A;  2GU6 A;  2EA2 A;  3S6B A;  4A6W A;  3PKA A;  2GGB A;  4U71 A;  1KQ9 A;  3IU8 A;  1WY2 A;  2BWW A;  1W2M A;  1QXZ A;  1R5G A;  4U6E A;  5E2C A;  1C23 A;  4MAT A;  2GG3 A;  2GU4 A;  2GG9 A;  4Z7M A;  2BB7 A;  4U76 A;  3BIP A;  1A16 A;  1YW9 A;  2ADU A;  2BWX A;  1QXY A;  4PNC A;  4U6C A;  3ROR A;  4ZWO A;  2P99 A;  1WLR A;  2B3L A;  2BWV A;  4IKS A;  3O5V A;  4FKC A;  4U75 A;  3IG4 A;  3BIQ A;  4R60 A;  1XGO A;  3OVK A;  1WBQ A;  2OAZ A;  2B3K A;  3L24 A;  1CHM A;  4IEC A;  1R58 A;  5JHU A;  2BHD A;  2HOW A;  5D6E A;  4RZZ A;  1C24 A;  4B28 A;  1YW7 A;  4IKR A;  2GG2 A;  3IL0 A;  5FCH A;  2Q95 A;  3Q6D A;  2NQ6 A;  4U6J A;  2EA4 A;  4S01 A;  1B59 A;  2GG0 A;  2ZSG A;  4FLJ A;  4U6W A;  2Q92 A;  4IDY A;  2NQ7 A;  2BWT A;  2GG5 A;  2GU7 A;  2BWU A;  4IKT A; 
#chains in the Genus database with same CATH topology
 2OKN A;  2Q94 A;  4QR8 A;  1N51 A;  5CDV A;  1MAT A;  3PKE A;  2BWS A;  1XGS A;  5CDL A;  1JAW A;  1BOA A;  2P9A A;  1O0X A;  4ZWU A;  1C27 A;  2GTX A;  2GA2 A;  3TAV A;  1YVM A;  2BHB A;  1YW8 A;  3PKC A;  4EGE A;  2P98 A;  3CTZ A;  1B6A A;  1R5H A;  4U6Z A;  1M35 A;  3TB5 A;  1QZY A;  1KP0 A;  3OOO A;  4RZY A;  1QXW A;  3QOC A;  4FLL A;  2GZ5 A;  1WKM A;  2GU5 A;  4KM3 A;  3FMR A;  5JI6 A;  4FO8 A;  2GG7 A;  2V3Y A;  3CB5 A;  3BIT A;  1Y1N A;  3FMQ A;  3MR1 A;  2V3X A;  1C22 A;  5E5B A;  1PV9 A;  4U73 A;  1WL9 A;  1YJ3 A;  3MX6 A;  3PEB A;  4S00 A;  2V3Z A;  1XGN A;  2GGC A;  2BHA A;  4IPA A;  3FM3 A;  4FLI A;  4JUQ A;  2G6P A;  3I7M A;  2BHC A;  2EVC A;  5CIK A;  5CNX A;  2EVO A;  1WL6 A;  4S2T P;  4ZNG A;  5CE6 A;  2Q93 A;  4PV4 A;  2MAT A;  3IU9 A;  3PN9 A;  5CDE A;  3RVA A;  3IU7 A;  4HXX A;  3L7G A;  2GG8 A;  2DFI A;  3PKD A;  4U1B A;  1XNZ A;  5FCF A;  4IU6 A;  4U70 A;  2V6C A;  4FUK A;  5CLS A;  2Q8K A;  4OOK A;  4IKU A;  3MAT A;  5D6F A;  2BN7 A;  3PKB A;  2BWY A;  2B3H A;  4U69 A;  4ZWP A;  1BN5 A;  4RGZ 1;  4IF7 A;  1XGM A;  4FLK A;  2EVM A;  3D27 A;  4S2R P;  2BH3 A;  3CB6 A;  4FO7 A;  4A6V A;  2IW2 A;  5JFR A;  1W7V A;  1C21 A;  1WN1 A;  1KQ0 A;  2Q96 A;  2GU6 A;  2EA2 A;  3S6B A;  4A6W A;  3PKA A;  2GGB A;  4U71 A;  1KQ9 A;  3IU8 A;  1WY2 A;  2BWW A;  1W2M A;  1QXZ A;  1R5G A;  4U6E A;  5E2C A;  1C23 A;  4MAT A;  2GG3 A;  2GU4 A;  2GG9 A;  4Z7M A;  2BB7 A;  4U76 A;  3BIP A;  1A16 A;  1YW9 A;  2ADU A;  2BWX A;  1QXY A;  4PNC A;  4U6C A;  3ROR A;  4ZWO A;  2P99 A;  1WLR A;  2B3L A;  2BWV A;  4IKS A;  3O5V A;  4FKC A;  4U75 A;  3IG4 A;  3BIQ A;  4R60 A;  1XGO A;  3OVK A;  1WBQ A;  2OAZ A;  2B3K A;  3L24 A;  1CHM A;  4IEC A;  1R58 A;  5JHU A;  2BHD A;  2HOW A;  5D6E A;  4RZZ A;  1C24 A;  4B28 A;  1YW7 A;  4IKR A;  2GG2 A;  3IL0 A;  5FCH A;  2Q95 A;  3Q6D A;  2NQ6 A;  4U6J A;  2EA4 A;  4S01 A;  1B59 A;  2GG0 A;  2ZSG A;  4FLJ A;  4U6W A;  2Q92 A;  4IDY A;  2NQ7 A;  2BWT A;  2GG5 A;  2GU7 A;  2BWU A;  4IKT A; 
#chains in the Genus database with same CATH homology
 2OKN A;  2Q94 A;  4QR8 A;  1N51 A;  5CDV A;  1MAT A;  3PKE A;  2BWS A;  1XGS A;  5CDL A;  1JAW A;  1BOA A;  2P9A A;  1O0X A;  4ZWU A;  1C27 A;  2GTX A;  2GA2 A;  3TAV A;  1YVM A;  2BHB A;  1YW8 A;  3PKC A;  4EGE A;  2P98 A;  3CTZ A;  1B6A A;  1R5H A;  4U6Z A;  1M35 A;  3TB5 A;  1QZY A;  1KP0 A;  3OOO A;  4RZY A;  1QXW A;  3QOC A;  4FLL A;  2GZ5 A;  1WKM A;  2GU5 A;  4KM3 A;  3FMR A;  5JI6 A;  4FO8 A;  2GG7 A;  2V3Y A;  3CB5 A;  3BIT A;  1Y1N A;  3FMQ A;  3MR1 A;  2V3X A;  1C22 A;  5E5B A;  1PV9 A;  4U73 A;  1WL9 A;  1YJ3 A;  3MX6 A;  3PEB A;  4S00 A;  2V3Z A;  1XGN A;  2GGC A;  2BHA A;  4IPA A;  3FM3 A;  4FLI A;  4JUQ A;  2G6P A;  3I7M A;  2BHC A;  2EVC A;  5CIK A;  5CNX A;  2EVO A;  1WL6 A;  4S2T P;  4ZNG A;  5CE6 A;  2Q93 A;  4PV4 A;  2MAT A;  3IU9 A;  3PN9 A;  5CDE A;  3RVA A;  3IU7 A;  4HXX A;  3L7G A;  2GG8 A;  2DFI A;  3PKD A;  4U1B A;  1XNZ A;  5FCF A;  4IU6 A;  4U70 A;  2V6C A;  4FUK A;  5CLS A;  2Q8K A;  4OOK A;  4IKU A;  3MAT A;  5D6F A;  2BN7 A;  3PKB A;  2BWY A;  2B3H A;  4U69 A;  4ZWP A;  1BN5 A;  4RGZ 1;  4IF7 A;  1XGM A;  4FLK A;  2EVM A;  3D27 A;  4S2R P;  2BH3 A;  3CB6 A;  4FO7 A;  4A6V A;  2IW2 A;  5JFR A;  1W7V A;  1C21 A;  1WN1 A;  1KQ0 A;  2Q96 A;  2GU6 A;  2EA2 A;  3S6B A;  4A6W A;  3PKA A;  2GGB A;  4U71 A;  1KQ9 A;  3IU8 A;  1WY2 A;  2BWW A;  1W2M A;  1QXZ A;  1R5G A;  4U6E A;  5E2C A;  1C23 A;  4MAT A;  2GG3 A;  2GU4 A;  2GG9 A;  4Z7M A;  2BB7 A;  4U76 A;  3BIP A;  1A16 A;  1YW9 A;  2ADU A;  2BWX A;  1QXY A;  4PNC A;  4U6C A;  3ROR A;  4ZWO A;  2P99 A;  1WLR A;  2B3L A;  2BWV A;  4IKS A;  3O5V A;  4FKC A;  4U75 A;  3IG4 A;  3BIQ A;  4R60 A;  1XGO A;  3OVK A;  1WBQ A;  2OAZ A;  2B3K A;  3L24 A;  1CHM A;  4IEC A;  1R58 A;  5JHU A;  2BHD A;  2HOW A;  5D6E A;  4RZZ A;  1C24 A;  4B28 A;  1YW7 A;  4IKR A;  2GG2 A;  3IL0 A;  5FCH A;  2Q95 A;  3Q6D A;  2NQ6 A;  4U6J A;  2EA4 A;  4S01 A;  1B59 A;  2GG0 A;  2ZSG A;  4FLJ A;  4U6W A;  2Q92 A;  4IDY A;  2NQ7 A;  2BWT A;  2GG5 A;  2GU7 A;  2BWU A;  4IKT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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