4PV4A

Proline aminopeptidase p ii from yersinia pestis
Total Genus 158
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
436
structure length
436
Chain Sequence
MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRIRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCILHYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLTLFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTASVVKDPDDIEALMALN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
molecule keywords Proline aminopeptidase P II
publication title Proline aminopeptidase P II from Yersinia pestis
rcsb
source organism Yersinia pestis
total genus 158
structure length 436
sequence length 436
chains with identical sequence B
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2014-03-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 4pv4A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4pv4A02
3TB5A 2ADUA 3CB6A 1QXYA 4FUKA 1Y1NA 1QXZA 3FM3A 4A6WA 4U6WA 4R60A 1XNZA 4U6JA 5CDEA 5E5BA 2Q95A 1CHMA 1W2MA 5D6EA 4QR8A 1R58A 1YVMA 1KQ9A 4IKTA 2GG8A 3OVKA 4EGEA 2EVCA 1WY2A 4IECA 4FKCA 1B6AA 4U6EA 3QOCA 3PKDA 4ZWPA 1BN5A 3FMQA 1QZYA 3PKCA 1W7VA 2V3XA 2Q8KA 2G6PA 2EVMA 1B59A 1YW9A 2BWYA 4FO8A 1N51A 5JFRA 2GU6A 2P98A 2BWVA 2B3LA 4IPAA 2BHCA 4KM3A 5E2CA 4IKRA 5CNXA 1QXWA 2BWUA 5CE6A 1XGSA 5FCFA 1C23A 5JHUA 4ZWUA 3MX6A 4FLIA 3CTZA 1O0XA 3PKAA 2Q92A 2NQ7A 2P99A 4IKSA 5CDVA 4U75A 5CDLA 4S2RP 5FCHA 4PV4A 1C24A 1XGMA 2GG3A 5CLSA 3CB5A 1BOAA 4PNCA 4FLLA 2GU7A 2P9AA 4IF7A 4S01A 4RZZA 2BHAA 3OOOA 2BWSA 2GZ5A 2V6CA 3MATA 4ZWOA 2EA4A 3MR1A 4Z7MA 2B3KA 3PN9A 3FMRA 4FO7A 4S00A 4U1BA 2GG2A 2BHBA 1WBQA 4RZYA 2DFIA 2GU4A 1R5HA 4B28A 5D6FA 2GG0A 2BWXA 2EA2A 3PKBA 4IU6A 3RVAA 3IU7A 4OOKA 3PEBA 3I7MA 2Q96A 4U69A 1XGNA 2OKNA 4U6CA 1YW8A 4RGZ1 2OAZA 1WL6A 2NQ6A 5JI6A 3IU8A 2MATA 1MATA 2BB7A 4IKUA 4U76A 1JAWA 3BIQA 4IDYA 3BITA 1R5GA 2GG7A 4U70A 2BHDA 3D27A 4HXXA 2BN7A 4FLKA 1XGOA 3Q6DA 4JUQA 2GGCA 2IW2A 1C21A 3TAVA 2Q93A 4FLJA 4ZNGA 2V3ZA 3PKEA 4MATA 2GG5A 3L24A 3RORA 1A16A 1PV9A 3O5VA 3IU9A 3BIPA 3L7GA 1KP0A 4U73A 2GG9A 2GTXA 2BWTA 3IL0A 3IG4A 2HOWA 2Q94A 1KQ0A 1WLRA 1C27A 4S2TP 1WKMA 1YW7A 2GU5A 2V3YA 4U6ZA 1WN1A 4U71A 2ZSGA 2BH3A 2GA2A 1C22A 1WL9A 2BWWA 2GGBA 3S6BA 4A6VA 2B3HA 2EVOA 1M35A 5CIKA 1YJ3A
chains in the Genus database with same CATH superfamily
3TB5A 2ADUA 3CB6A 1QXYA 4FUKA 1Y1NA 1QXZA 3FM3A 4A6WA 4U6WA 4R60A 1XNZA 4U6JA 5CDEA 5E5BA 2Q95A 1CHMA 1W2MA 5D6EA 4QR8A 1R58A 1YVMA 1KQ9A 4IKTA 2GG8A 3OVKA 4EGEA 2EVCA 1WY2A 4IECA 4FKCA 1B6AA 4U6EA 3QOCA 3PKDA 4ZWPA 1BN5A 3FMQA 1QZYA 3PKCA 1W7VA 2V3XA 2Q8KA 2G6PA 2EVMA 1B59A 1YW9A 2BWYA 4FO8A 1N51A 5JFRA 2GU6A 2P98A 2BWVA 2B3LA 4IPAA 2BHCA 4KM3A 5E2CA 4IKRA 5CNXA 1QXWA 2BWUA 5CE6A 1XGSA 5FCFA 1C23A 5JHUA 4ZWUA 3MX6A 4FLIA 3CTZA 1O0XA 3PKAA 2Q92A 2NQ7A 2P99A 4IKSA 5CDVA 4U75A 5CDLA 4S2RP 5FCHA 4PV4A 1C24A 1XGMA 2GG3A 5CLSA 3CB5A 1BOAA 4PNCA 4FLLA 2GU7A 2P9AA 4IF7A 4S01A 4RZZA 2BHAA 3OOOA 2BWSA 2GZ5A 2V6CA 3MATA 4ZWOA 2EA4A 3MR1A 4Z7MA 2B3KA 3PN9A 3FMRA 4FO7A 4S00A 4U1BA 2GG2A 2BHBA 1WBQA 4RZYA 2DFIA 2GU4A 1R5HA 4B28A 5D6FA 2GG0A 2BWXA 2EA2A 3PKBA 4IU6A 3RVAA 3IU7A 4OOKA 3PEBA 3I7MA 2Q96A 4U69A 1XGNA 2OKNA 4U6CA 1YW8A 4RGZ1 2OAZA 1WL6A 2NQ6A 5JI6A 3IU8A 2MATA 1MATA 2BB7A 4IKUA 4U76A 1JAWA 3BIQA 4IDYA 3BITA 1R5GA 2GG7A 4U70A 2BHDA 3D27A 4HXXA 2BN7A 4FLKA 1XGOA 3Q6DA 4JUQA 2GGCA 2IW2A 1C21A 3TAVA 2Q93A 4FLJA 4ZNGA 2V3ZA 3PKEA 4MATA 2GG5A 3L24A 3RORA 1A16A 1PV9A 3O5VA 3IU9A 3BIPA 3L7GA 1KP0A 4U73A 2GG9A 2GTXA 2BWTA 3IL0A 3IG4A 2HOWA 2Q94A 1KQ0A 1WLRA 1C27A 4S2TP 1WKMA 1YW7A 2GU5A 2V3YA 4U6ZA 1WN1A 4U71A 2ZSGA 2BH3A 2GA2A 1C22A 1WL9A 2BWWA 2GGBA 3S6BA 4A6VA 2B3HA 2EVOA 1M35A 5CIKA 1YJ3A
chains in the Genus database with same CATH topology
3TB5A 2ADUA 3CB6A 1QXYA 4FUKA 1Y1NA 1QXZA 3FM3A 4A6WA 4U6WA 4R60A 1XNZA 4U6JA 5CDEA 5E5BA 2Q95A 1CHMA 1W2MA 5D6EA 4QR8A 1R58A 1YVMA 1KQ9A 4IKTA 2GG8A 3OVKA 4EGEA 2EVCA 1WY2A 4IECA 4FKCA 1B6AA 4U6EA 3QOCA 3PKDA 4ZWPA 1BN5A 3FMQA 1QZYA 3PKCA 1W7VA 2V3XA 2Q8KA 2G6PA 2EVMA 1B59A 1YW9A 2BWYA 4FO8A 1N51A 5JFRA 2GU6A 2P98A 2BWVA 2B3LA 4IPAA 2BHCA 4KM3A 5E2CA 4IKRA 5CNXA 1QXWA 2BWUA 5CE6A 1XGSA 5FCFA 1C23A 5JHUA 4ZWUA 3MX6A 4FLIA 3CTZA 1O0XA 3PKAA 2Q92A 2NQ7A 2P99A 4IKSA 5CDVA 4U75A 5CDLA 4S2RP 5FCHA 4PV4A 1C24A 1XGMA 2GG3A 5CLSA 3CB5A 1BOAA 4PNCA 4FLLA 2GU7A 2P9AA 4IF7A 4S01A 4RZZA 2BHAA 3OOOA 2BWSA 2GZ5A 2V6CA 3MATA 4ZWOA 2EA4A 3MR1A 4Z7MA 2B3KA 3PN9A 3FMRA 4FO7A 4S00A 4U1BA 2GG2A 2BHBA 1WBQA 4RZYA 2DFIA 2GU4A 1R5HA 4B28A 5D6FA 2GG0A 2BWXA 2EA2A 3PKBA 4IU6A 3RVAA 3IU7A 4OOKA 3PEBA 3I7MA 2Q96A 4U69A 1XGNA 2OKNA 4U6CA 1YW8A 4RGZ1 2OAZA 1WL6A 2NQ6A 5JI6A 3IU8A 2MATA 1MATA 2BB7A 4IKUA 4U76A 1JAWA 3BIQA 4IDYA 3BITA 1R5GA 2GG7A 4U70A 2BHDA 3D27A 4HXXA 2BN7A 4FLKA 1XGOA 3Q6DA 4JUQA 2GGCA 2IW2A 1C21A 3TAVA 2Q93A 4FLJA 4ZNGA 2V3ZA 3PKEA 4MATA 2GG5A 3L24A 3RORA 1A16A 1PV9A 3O5VA 3IU9A 3BIPA 3L7GA 1KP0A 4U73A 2GG9A 2GTXA 2BWTA 3IL0A 3IG4A 2HOWA 2Q94A 1KQ0A 1WLRA 1C27A 4S2TP 1WKMA 1YW7A 2GU5A 2V3YA 4U6ZA 1WN1A 4U71A 2ZSGA 2BH3A 2GA2A 1C22A 1WL9A 2BWWA 2GGBA 3S6BA 4A6VA 2B3HA 2EVOA 1M35A 5CIKA 1YJ3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3TB5 A;  2ADU A;  3CB6 A;  1QXY A;  4FUK A;  1Y1N A;  1QXZ A;  3FM3 A;  4A6W A;  4U6W A;  4R60 A;  1XNZ A;  4U6J A;  5CDE A;  5E5B A;  2Q95 A;  1CHM A;  1W2M A;  5D6E A;  4QR8 A;  1R58 A;  1YVM A;  1KQ9 A;  4IKT A;  2GG8 A;  3OVK A;  4EGE A;  2EVC A;  1WY2 A;  4IEC A;  4FKC A;  1B6A A;  4U6E A;  3QOC A;  3PKD A;  4ZWP A;  1BN5 A;  3FMQ A;  1QZY A;  3PKC A;  1W7V A;  2V3X A;  2Q8K A;  2G6P A;  2EVM A;  1B59 A;  1YW9 A;  2BWY A;  4FO8 A;  1N51 A;  5JFR A;  2GU6 A;  2P98 A;  2BWV A;  2B3L A;  4IPA A;  2BHC A;  4KM3 A;  5E2C A;  4IKR A;  5CNX A;  1QXW A;  2BWU A;  5CE6 A;  1XGS A;  5FCF A;  1C23 A;  5JHU A;  4ZWU A;  3MX6 A;  4FLI A;  3CTZ A;  1O0X A;  3PKA A;  2Q92 A;  2NQ7 A;  2P99 A;  4IKS A;  5CDV A;  4U75 A;  5CDL A;  4S2R P;  5FCH A;  4PV4 A;  1C24 A;  1XGM A;  2GG3 A;  5CLS A;  3CB5 A;  1BOA A;  4PNC A;  4FLL A;  2GU7 A;  2P9A A;  4IF7 A;  4S01 A;  4RZZ A;  2BHA A;  3OOO A;  2BWS A;  2GZ5 A;  2V6C A;  3MAT A;  4ZWO A;  2EA4 A;  3MR1 A;  4Z7M A;  2B3K A;  3PN9 A;  3FMR A;  4FO7 A;  4S00 A;  4U1B A;  2GG2 A;  2BHB A;  1WBQ A;  4RZY A;  2DFI A;  2GU4 A;  1R5H A;  4B28 A;  5D6F A;  2GG0 A;  2BWX A;  2EA2 A;  3PKB A;  4IU6 A;  3RVA A;  3IU7 A;  4OOK A;  3PEB A;  3I7M A;  2Q96 A;  4U69 A;  1XGN A;  2OKN A;  4U6C A;  1YW8 A;  4RGZ 1;  2OAZ A;  1WL6 A;  2NQ6 A;  5JI6 A;  3IU8 A;  2MAT A;  1MAT A;  2BB7 A;  4IKU A;  4U76 A;  1JAW A;  3BIQ A;  4IDY A;  3BIT A;  1R5G A;  2GG7 A;  4U70 A;  2BHD A;  3D27 A;  4HXX A;  2BN7 A;  4FLK A;  1XGO A;  3Q6D A;  4JUQ A;  2GGC A;  2IW2 A;  1C21 A;  3TAV A;  2Q93 A;  4FLJ A;  4ZNG A;  2V3Z A;  3PKE A;  4MAT A;  2GG5 A;  3L24 A;  3ROR A;  1A16 A;  1PV9 A;  3O5V A;  3IU9 A;  3BIP A;  3L7G A;  1KP0 A;  4U73 A;  2GG9 A;  2GTX A;  2BWT A;  3IL0 A;  3IG4 A;  2HOW A;  2Q94 A;  1KQ0 A;  1WLR A;  1C27 A;  4S2T P;  1WKM A;  1YW7 A;  2GU5 A;  2V3Y A;  4U6Z A;  1WN1 A;  4U71 A;  2ZSG A;  2BH3 A;  2GA2 A;  1C22 A;  1WL9 A;  2BWW A;  2GGB A;  3S6B A;  4A6V A;  2B3H A;  2EVO A;  1M35 A;  5CIK A;  1YJ3 A; 
#chains in the Genus database with same CATH topology
 3TB5 A;  2ADU A;  3CB6 A;  1QXY A;  4FUK A;  1Y1N A;  1QXZ A;  3FM3 A;  4A6W A;  4U6W A;  4R60 A;  1XNZ A;  4U6J A;  5CDE A;  5E5B A;  2Q95 A;  1CHM A;  1W2M A;  5D6E A;  4QR8 A;  1R58 A;  1YVM A;  1KQ9 A;  4IKT A;  2GG8 A;  3OVK A;  4EGE A;  2EVC A;  1WY2 A;  4IEC A;  4FKC A;  1B6A A;  4U6E A;  3QOC A;  3PKD A;  4ZWP A;  1BN5 A;  3FMQ A;  1QZY A;  3PKC A;  1W7V A;  2V3X A;  2Q8K A;  2G6P A;  2EVM A;  1B59 A;  1YW9 A;  2BWY A;  4FO8 A;  1N51 A;  5JFR A;  2GU6 A;  2P98 A;  2BWV A;  2B3L A;  4IPA A;  2BHC A;  4KM3 A;  5E2C A;  4IKR A;  5CNX A;  1QXW A;  2BWU A;  5CE6 A;  1XGS A;  5FCF A;  1C23 A;  5JHU A;  4ZWU A;  3MX6 A;  4FLI A;  3CTZ A;  1O0X A;  3PKA A;  2Q92 A;  2NQ7 A;  2P99 A;  4IKS A;  5CDV A;  4U75 A;  5CDL A;  4S2R P;  5FCH A;  4PV4 A;  1C24 A;  1XGM A;  2GG3 A;  5CLS A;  3CB5 A;  1BOA A;  4PNC A;  4FLL A;  2GU7 A;  2P9A A;  4IF7 A;  4S01 A;  4RZZ A;  2BHA A;  3OOO A;  2BWS A;  2GZ5 A;  2V6C A;  3MAT A;  4ZWO A;  2EA4 A;  3MR1 A;  4Z7M A;  2B3K A;  3PN9 A;  3FMR A;  4FO7 A;  4S00 A;  4U1B A;  2GG2 A;  2BHB A;  1WBQ A;  4RZY A;  2DFI A;  2GU4 A;  1R5H A;  4B28 A;  5D6F A;  2GG0 A;  2BWX A;  2EA2 A;  3PKB A;  4IU6 A;  3RVA A;  3IU7 A;  4OOK A;  3PEB A;  3I7M A;  2Q96 A;  4U69 A;  1XGN A;  2OKN A;  4U6C A;  1YW8 A;  4RGZ 1;  2OAZ A;  1WL6 A;  2NQ6 A;  5JI6 A;  3IU8 A;  2MAT A;  1MAT A;  2BB7 A;  4IKU A;  4U76 A;  1JAW A;  3BIQ A;  4IDY A;  3BIT A;  1R5G A;  2GG7 A;  4U70 A;  2BHD A;  3D27 A;  4HXX A;  2BN7 A;  4FLK A;  1XGO A;  3Q6D A;  4JUQ A;  2GGC A;  2IW2 A;  1C21 A;  3TAV A;  2Q93 A;  4FLJ A;  4ZNG A;  2V3Z A;  3PKE A;  4MAT A;  2GG5 A;  3L24 A;  3ROR A;  1A16 A;  1PV9 A;  3O5V A;  3IU9 A;  3BIP A;  3L7G A;  1KP0 A;  4U73 A;  2GG9 A;  2GTX A;  2BWT A;  3IL0 A;  3IG4 A;  2HOW A;  2Q94 A;  1KQ0 A;  1WLR A;  1C27 A;  4S2T P;  1WKM A;  1YW7 A;  2GU5 A;  2V3Y A;  4U6Z A;  1WN1 A;  4U71 A;  2ZSG A;  2BH3 A;  2GA2 A;  1C22 A;  1WL9 A;  2BWW A;  2GGB A;  3S6B A;  4A6V A;  2B3H A;  2EVO A;  1M35 A;  5CIK A;  1YJ3 A; 
#chains in the Genus database with same CATH homology
 3TB5 A;  2ADU A;  3CB6 A;  1QXY A;  4FUK A;  1Y1N A;  1QXZ A;  3FM3 A;  4A6W A;  4U6W A;  4R60 A;  1XNZ A;  4U6J A;  5CDE A;  5E5B A;  2Q95 A;  1CHM A;  1W2M A;  5D6E A;  4QR8 A;  1R58 A;  1YVM A;  1KQ9 A;  4IKT A;  2GG8 A;  3OVK A;  4EGE A;  2EVC A;  1WY2 A;  4IEC A;  4FKC A;  1B6A A;  4U6E A;  3QOC A;  3PKD A;  4ZWP A;  1BN5 A;  3FMQ A;  1QZY A;  3PKC A;  1W7V A;  2V3X A;  2Q8K A;  2G6P A;  2EVM A;  1B59 A;  1YW9 A;  2BWY A;  4FO8 A;  1N51 A;  5JFR A;  2GU6 A;  2P98 A;  2BWV A;  2B3L A;  4IPA A;  2BHC A;  4KM3 A;  5E2C A;  4IKR A;  5CNX A;  1QXW A;  2BWU A;  5CE6 A;  1XGS A;  5FCF A;  1C23 A;  5JHU A;  4ZWU A;  3MX6 A;  4FLI A;  3CTZ A;  1O0X A;  3PKA A;  2Q92 A;  2NQ7 A;  2P99 A;  4IKS A;  5CDV A;  4U75 A;  5CDL A;  4S2R P;  5FCH A;  4PV4 A;  1C24 A;  1XGM A;  2GG3 A;  5CLS A;  3CB5 A;  1BOA A;  4PNC A;  4FLL A;  2GU7 A;  2P9A A;  4IF7 A;  4S01 A;  4RZZ A;  2BHA A;  3OOO A;  2BWS A;  2GZ5 A;  2V6C A;  3MAT A;  4ZWO A;  2EA4 A;  3MR1 A;  4Z7M A;  2B3K A;  3PN9 A;  3FMR A;  4FO7 A;  4S00 A;  4U1B A;  2GG2 A;  2BHB A;  1WBQ A;  4RZY A;  2DFI A;  2GU4 A;  1R5H A;  4B28 A;  5D6F A;  2GG0 A;  2BWX A;  2EA2 A;  3PKB A;  4IU6 A;  3RVA A;  3IU7 A;  4OOK A;  3PEB A;  3I7M A;  2Q96 A;  4U69 A;  1XGN A;  2OKN A;  4U6C A;  1YW8 A;  4RGZ 1;  2OAZ A;  1WL6 A;  2NQ6 A;  5JI6 A;  3IU8 A;  2MAT A;  1MAT A;  2BB7 A;  4IKU A;  4U76 A;  1JAW A;  3BIQ A;  4IDY A;  3BIT A;  1R5G A;  2GG7 A;  4U70 A;  2BHD A;  3D27 A;  4HXX A;  2BN7 A;  4FLK A;  1XGO A;  3Q6D A;  4JUQ A;  2GGC A;  2IW2 A;  1C21 A;  3TAV A;  2Q93 A;  4FLJ A;  4ZNG A;  2V3Z A;  3PKE A;  4MAT A;  2GG5 A;  3L24 A;  3ROR A;  1A16 A;  1PV9 A;  3O5V A;  3IU9 A;  3BIP A;  3L7G A;  1KP0 A;  4U73 A;  2GG9 A;  2GTX A;  2BWT A;  3IL0 A;  3IG4 A;  2HOW A;  2Q94 A;  1KQ0 A;  1WLR A;  1C27 A;  4S2T P;  1WKM A;  1YW7 A;  2GU5 A;  2V3Y A;  4U6Z A;  1WN1 A;  4U71 A;  2ZSG A;  2BH3 A;  2GA2 A;  1C22 A;  1WL9 A;  2BWW A;  2GGB A;  3S6B A;  4A6V A;  2B3H A;  2EVO A;  1M35 A;  5CIK A;  1YJ3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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