4PV4A

Proline aminopeptidase p ii from yersinia pestis
Total Genus 158
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
436
structure length
436
Chain Sequence
MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRIRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCILHYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLTLFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTASVVKDPDDIEALMALN
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Yersinia pestis
publication title Proline aminopeptidase P II from Yersinia pestis
rcsb
molecule keywords Proline aminopeptidase P II
total genus 158
structure length 436
sequence length 436
chains with identical sequence B
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2014-03-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 4pv4A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4pv4A02
1W2MA 3D27A 2GGCA 1BN5A 1MATA 1CHMA 2GG2A 4FLKA 4S00A 2BWVA 4R60A 4RGZ1 2G6PA 1WL6A 3PN9A 2GG8A 4IKSA 4KM3A 1WKMA 4U76A 2BWUA 2OAZA 2GG3A 1KQ9A 1XGSA 1XGNA 2BB7A 3TB5A 2BWTA 1WL9A 2EVOA 4FUKA 4A6VA 1Y1NA 4IU6A 3PKDA 5CLSA 4IKUA 4A6WA 1B59A 5CDLA 3MX6A 1XGMA 5CE6A 2HOWA 1R5GA 2EA2A 2BHDA 3Q6DA 2P9AA 2DFIA 4U71A 5CIKA 5FCHA 4FO8A 3CB6A 4FO7A 3BIPA 1C23A 2GGBA 2BHBA 3S6BA 3PKEA 2BHAA 1W7VA 1WY2A 3IG4A 4IKRA 4U6WA 4RZZA 1BOAA 5JFRA 1WBQA 3CB5A 1YVMA 5E5BA 2GU5A 1JAWA 4FKCA 5CDEA 4OOKA 1YW8A 3IU9A 1C24A 5JI6A 3CTZA 2NQ7A 1QXWA 4FLJA 2NQ6A 4ZWOA 1QZYA 1XNZA 4IPAA 4U6ZA 2GG9A 3PKAA 4S2TP 3TAVA 5D6FA 2BWSA 2GTXA 4FLIA 4B28A 2BN7A 1M35A 4ZNGA 2EA4A 3I7MA 4PV4A 2GG7A 1KP0A 4U1BA 1C27A 2Q92A 3IL0A 2GG0A 2GU4A 3IU8A 3BITA 3BIQA 1R58A 2IW2A 3O5VA 1PV9A 1QXYA 3FM3A 2P98A 2Q96A 3OVKA 3OOOA 3RVAA 4U6CA 2GU7A 2BHCA 1YW9A 3MATA 3RORA 2B3KA 2Q93A 2Q8KA 1WN1A 4U75A 1B6AA 2B3LA 2V3ZA 4IDYA 2P99A 1QXZA 2Q94A 2BWYA 4MATA 5JHUA 2Q95A 5D6EA 1N51A 5E2CA 4U69A 4U73A 2V3XA 2GZ5A 1KQ0A 5CDVA 4U6EA 2ADUA 2MATA 4S01A 1C21A 4HXXA 4PNCA 1A16A 5FCFA 2BWXA 2GG5A 2GA2A 2GU6A 1WLRA 3QOCA 4EGEA 2EVCA 3L24A 3PKCA 2EVMA 4QR8A 4IKTA 1YW7A 1O0XA 1R5HA 4ZWUA 3FMRA 1XGOA 4IF7A 3PKBA 1C22A 3IU7A 4U6JA 4JUQA 2OKNA 4FLLA 4ZWPA 3L7GA 1YJ3A 4Z7MA 2V3YA 2ZSGA 2B3HA 4IECA 4U70A 3MR1A 4S2RP 3PEBA 4RZYA 5CNXA 3FMQA 2V6CA 2BH3A 2BWWA
chains in the Genus database with same CATH superfamily
1W2MA 3D27A 2GGCA 1BN5A 1MATA 1CHMA 2GG2A 4FLKA 4S00A 2BWVA 4R60A 4RGZ1 2G6PA 1WL6A 3PN9A 2GG8A 4IKSA 4KM3A 1WKMA 4U76A 2BWUA 2OAZA 2GG3A 1KQ9A 1XGSA 1XGNA 2BB7A 3TB5A 2BWTA 1WL9A 2EVOA 4FUKA 4A6VA 1Y1NA 4IU6A 3PKDA 5CLSA 4IKUA 4A6WA 1B59A 5CDLA 3MX6A 1XGMA 5CE6A 2HOWA 1R5GA 2EA2A 2BHDA 3Q6DA 2P9AA 2DFIA 4U71A 5CIKA 5FCHA 4FO8A 3CB6A 4FO7A 3BIPA 1C23A 2GGBA 2BHBA 3S6BA 3PKEA 2BHAA 1W7VA 1WY2A 3IG4A 4IKRA 4U6WA 4RZZA 1BOAA 5JFRA 1WBQA 3CB5A 1YVMA 5E5BA 2GU5A 1JAWA 4FKCA 5CDEA 4OOKA 1YW8A 3IU9A 1C24A 5JI6A 3CTZA 2NQ7A 1QXWA 4FLJA 2NQ6A 4ZWOA 1QZYA 1XNZA 4IPAA 4U6ZA 2GG9A 3PKAA 4S2TP 3TAVA 5D6FA 2BWSA 2GTXA 4FLIA 4B28A 2BN7A 1M35A 4ZNGA 2EA4A 3I7MA 4PV4A 2GG7A 1KP0A 4U1BA 1C27A 2Q92A 3IL0A 2GG0A 2GU4A 3IU8A 3BITA 3BIQA 1R58A 2IW2A 3O5VA 1PV9A 1QXYA 3FM3A 2P98A 2Q96A 3OVKA 3OOOA 3RVAA 4U6CA 2GU7A 2BHCA 1YW9A 3MATA 3RORA 2B3KA 2Q93A 2Q8KA 1WN1A 4U75A 1B6AA 2B3LA 2V3ZA 4IDYA 2P99A 1QXZA 2Q94A 2BWYA 4MATA 5JHUA 2Q95A 5D6EA 1N51A 5E2CA 4U69A 4U73A 2V3XA 2GZ5A 1KQ0A 5CDVA 4U6EA 2ADUA 2MATA 4S01A 1C21A 4HXXA 4PNCA 1A16A 5FCFA 2BWXA 2GG5A 2GA2A 2GU6A 1WLRA 3QOCA 4EGEA 2EVCA 3L24A 3PKCA 2EVMA 4QR8A 4IKTA 1YW7A 1O0XA 1R5HA 4ZWUA 3FMRA 1XGOA 4IF7A 3PKBA 1C22A 3IU7A 4U6JA 4JUQA 2OKNA 4FLLA 4ZWPA 3L7GA 1YJ3A 4Z7MA 2V3YA 2ZSGA 2B3HA 4IECA 4U70A 3MR1A 4S2RP 3PEBA 4RZYA 5CNXA 3FMQA 2V6CA 2BH3A 2BWWA
chains in the Genus database with same CATH topology
1W2MA 3D27A 2GGCA 1BN5A 1MATA 1CHMA 2GG2A 4FLKA 4S00A 2BWVA 4R60A 4RGZ1 2G6PA 1WL6A 3PN9A 2GG8A 4IKSA 4KM3A 1WKMA 4U76A 2BWUA 2OAZA 2GG3A 1KQ9A 1XGSA 1XGNA 2BB7A 3TB5A 2BWTA 1WL9A 2EVOA 4FUKA 4A6VA 1Y1NA 4IU6A 3PKDA 5CLSA 4IKUA 4A6WA 1B59A 5CDLA 3MX6A 1XGMA 5CE6A 2HOWA 1R5GA 2EA2A 2BHDA 3Q6DA 2P9AA 2DFIA 4U71A 5CIKA 5FCHA 4FO8A 3CB6A 4FO7A 3BIPA 1C23A 2GGBA 2BHBA 3S6BA 3PKEA 2BHAA 1W7VA 1WY2A 3IG4A 4IKRA 4U6WA 4RZZA 1BOAA 5JFRA 1WBQA 3CB5A 1YVMA 5E5BA 2GU5A 1JAWA 4FKCA 5CDEA 4OOKA 1YW8A 3IU9A 1C24A 5JI6A 3CTZA 2NQ7A 1QXWA 4FLJA 2NQ6A 4ZWOA 1QZYA 1XNZA 4IPAA 4U6ZA 2GG9A 3PKAA 4S2TP 3TAVA 5D6FA 2BWSA 2GTXA 4FLIA 4B28A 2BN7A 1M35A 4ZNGA 2EA4A 3I7MA 4PV4A 2GG7A 1KP0A 4U1BA 1C27A 2Q92A 3IL0A 2GG0A 2GU4A 3IU8A 3BITA 3BIQA 1R58A 2IW2A 3O5VA 1PV9A 1QXYA 3FM3A 2P98A 2Q96A 3OVKA 3OOOA 3RVAA 4U6CA 2GU7A 2BHCA 1YW9A 3MATA 3RORA 2B3KA 2Q93A 2Q8KA 1WN1A 4U75A 1B6AA 2B3LA 2V3ZA 4IDYA 2P99A 1QXZA 2Q94A 2BWYA 4MATA 5JHUA 2Q95A 5D6EA 1N51A 5E2CA 4U69A 4U73A 2V3XA 2GZ5A 1KQ0A 5CDVA 4U6EA 2ADUA 2MATA 4S01A 1C21A 4HXXA 4PNCA 1A16A 5FCFA 2BWXA 2GG5A 2GA2A 2GU6A 1WLRA 3QOCA 4EGEA 2EVCA 3L24A 3PKCA 2EVMA 4QR8A 4IKTA 1YW7A 1O0XA 1R5HA 4ZWUA 3FMRA 1XGOA 4IF7A 3PKBA 1C22A 3IU7A 4U6JA 4JUQA 2OKNA 4FLLA 4ZWPA 3L7GA 1YJ3A 4Z7MA 2V3YA 2ZSGA 2B3HA 4IECA 4U70A 3MR1A 4S2RP 3PEBA 4RZYA 5CNXA 3FMQA 2V6CA 2BH3A 2BWWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1W2M A;  3D27 A;  2GGC A;  1BN5 A;  1MAT A;  1CHM A;  2GG2 A;  4FLK A;  4S00 A;  2BWV A;  4R60 A;  4RGZ 1;  2G6P A;  1WL6 A;  3PN9 A;  2GG8 A;  4IKS A;  4KM3 A;  1WKM A;  4U76 A;  2BWU A;  2OAZ A;  2GG3 A;  1KQ9 A;  1XGS A;  1XGN A;  2BB7 A;  3TB5 A;  2BWT A;  1WL9 A;  2EVO A;  4FUK A;  4A6V A;  1Y1N A;  4IU6 A;  3PKD A;  5CLS A;  4IKU A;  4A6W A;  1B59 A;  5CDL A;  3MX6 A;  1XGM A;  5CE6 A;  2HOW A;  1R5G A;  2EA2 A;  2BHD A;  3Q6D A;  2P9A A;  2DFI A;  4U71 A;  5CIK A;  5FCH A;  4FO8 A;  3CB6 A;  4FO7 A;  3BIP A;  1C23 A;  2GGB A;  2BHB A;  3S6B A;  3PKE A;  2BHA A;  1W7V A;  1WY2 A;  3IG4 A;  4IKR A;  4U6W A;  4RZZ A;  1BOA A;  5JFR A;  1WBQ A;  3CB5 A;  1YVM A;  5E5B A;  2GU5 A;  1JAW A;  4FKC A;  5CDE A;  4OOK A;  1YW8 A;  3IU9 A;  1C24 A;  5JI6 A;  3CTZ A;  2NQ7 A;  1QXW A;  4FLJ A;  2NQ6 A;  4ZWO A;  1QZY A;  1XNZ A;  4IPA A;  4U6Z A;  2GG9 A;  3PKA A;  4S2T P;  3TAV A;  5D6F A;  2BWS A;  2GTX A;  4FLI A;  4B28 A;  2BN7 A;  1M35 A;  4ZNG A;  2EA4 A;  3I7M A;  4PV4 A;  2GG7 A;  1KP0 A;  4U1B A;  1C27 A;  2Q92 A;  3IL0 A;  2GG0 A;  2GU4 A;  3IU8 A;  3BIT A;  3BIQ A;  1R58 A;  2IW2 A;  3O5V A;  1PV9 A;  1QXY A;  3FM3 A;  2P98 A;  2Q96 A;  3OVK A;  3OOO A;  3RVA A;  4U6C A;  2GU7 A;  2BHC A;  1YW9 A;  3MAT A;  3ROR A;  2B3K A;  2Q93 A;  2Q8K A;  1WN1 A;  4U75 A;  1B6A A;  2B3L A;  2V3Z A;  4IDY A;  2P99 A;  1QXZ A;  2Q94 A;  2BWY A;  4MAT A;  5JHU A;  2Q95 A;  5D6E A;  1N51 A;  5E2C A;  4U69 A;  4U73 A;  2V3X A;  2GZ5 A;  1KQ0 A;  5CDV A;  4U6E A;  2ADU A;  2MAT A;  4S01 A;  1C21 A;  4HXX A;  4PNC A;  1A16 A;  5FCF A;  2BWX A;  2GG5 A;  2GA2 A;  2GU6 A;  1WLR A;  3QOC A;  4EGE A;  2EVC A;  3L24 A;  3PKC A;  2EVM A;  4QR8 A;  4IKT A;  1YW7 A;  1O0X A;  1R5H A;  4ZWU A;  3FMR A;  1XGO A;  4IF7 A;  3PKB A;  1C22 A;  3IU7 A;  4U6J A;  4JUQ A;  2OKN A;  4FLL A;  4ZWP A;  3L7G A;  1YJ3 A;  4Z7M A;  2V3Y A;  2ZSG A;  2B3H A;  4IEC A;  4U70 A;  3MR1 A;  4S2R P;  3PEB A;  4RZY A;  5CNX A;  3FMQ A;  2V6C A;  2BH3 A;  2BWW A; 
#chains in the Genus database with same CATH topology
 1W2M A;  3D27 A;  2GGC A;  1BN5 A;  1MAT A;  1CHM A;  2GG2 A;  4FLK A;  4S00 A;  2BWV A;  4R60 A;  4RGZ 1;  2G6P A;  1WL6 A;  3PN9 A;  2GG8 A;  4IKS A;  4KM3 A;  1WKM A;  4U76 A;  2BWU A;  2OAZ A;  2GG3 A;  1KQ9 A;  1XGS A;  1XGN A;  2BB7 A;  3TB5 A;  2BWT A;  1WL9 A;  2EVO A;  4FUK A;  4A6V A;  1Y1N A;  4IU6 A;  3PKD A;  5CLS A;  4IKU A;  4A6W A;  1B59 A;  5CDL A;  3MX6 A;  1XGM A;  5CE6 A;  2HOW A;  1R5G A;  2EA2 A;  2BHD A;  3Q6D A;  2P9A A;  2DFI A;  4U71 A;  5CIK A;  5FCH A;  4FO8 A;  3CB6 A;  4FO7 A;  3BIP A;  1C23 A;  2GGB A;  2BHB A;  3S6B A;  3PKE A;  2BHA A;  1W7V A;  1WY2 A;  3IG4 A;  4IKR A;  4U6W A;  4RZZ A;  1BOA A;  5JFR A;  1WBQ A;  3CB5 A;  1YVM A;  5E5B A;  2GU5 A;  1JAW A;  4FKC A;  5CDE A;  4OOK A;  1YW8 A;  3IU9 A;  1C24 A;  5JI6 A;  3CTZ A;  2NQ7 A;  1QXW A;  4FLJ A;  2NQ6 A;  4ZWO A;  1QZY A;  1XNZ A;  4IPA A;  4U6Z A;  2GG9 A;  3PKA A;  4S2T P;  3TAV A;  5D6F A;  2BWS A;  2GTX A;  4FLI A;  4B28 A;  2BN7 A;  1M35 A;  4ZNG A;  2EA4 A;  3I7M A;  4PV4 A;  2GG7 A;  1KP0 A;  4U1B A;  1C27 A;  2Q92 A;  3IL0 A;  2GG0 A;  2GU4 A;  3IU8 A;  3BIT A;  3BIQ A;  1R58 A;  2IW2 A;  3O5V A;  1PV9 A;  1QXY A;  3FM3 A;  2P98 A;  2Q96 A;  3OVK A;  3OOO A;  3RVA A;  4U6C A;  2GU7 A;  2BHC A;  1YW9 A;  3MAT A;  3ROR A;  2B3K A;  2Q93 A;  2Q8K A;  1WN1 A;  4U75 A;  1B6A A;  2B3L A;  2V3Z A;  4IDY A;  2P99 A;  1QXZ A;  2Q94 A;  2BWY A;  4MAT A;  5JHU A;  2Q95 A;  5D6E A;  1N51 A;  5E2C A;  4U69 A;  4U73 A;  2V3X A;  2GZ5 A;  1KQ0 A;  5CDV A;  4U6E A;  2ADU A;  2MAT A;  4S01 A;  1C21 A;  4HXX A;  4PNC A;  1A16 A;  5FCF A;  2BWX A;  2GG5 A;  2GA2 A;  2GU6 A;  1WLR A;  3QOC A;  4EGE A;  2EVC A;  3L24 A;  3PKC A;  2EVM A;  4QR8 A;  4IKT A;  1YW7 A;  1O0X A;  1R5H A;  4ZWU A;  3FMR A;  1XGO A;  4IF7 A;  3PKB A;  1C22 A;  3IU7 A;  4U6J A;  4JUQ A;  2OKN A;  4FLL A;  4ZWP A;  3L7G A;  1YJ3 A;  4Z7M A;  2V3Y A;  2ZSG A;  2B3H A;  4IEC A;  4U70 A;  3MR1 A;  4S2R P;  3PEB A;  4RZY A;  5CNX A;  3FMQ A;  2V6C A;  2BH3 A;  2BWW A; 
#chains in the Genus database with same CATH homology
 1W2M A;  3D27 A;  2GGC A;  1BN5 A;  1MAT A;  1CHM A;  2GG2 A;  4FLK A;  4S00 A;  2BWV A;  4R60 A;  4RGZ 1;  2G6P A;  1WL6 A;  3PN9 A;  2GG8 A;  4IKS A;  4KM3 A;  1WKM A;  4U76 A;  2BWU A;  2OAZ A;  2GG3 A;  1KQ9 A;  1XGS A;  1XGN A;  2BB7 A;  3TB5 A;  2BWT A;  1WL9 A;  2EVO A;  4FUK A;  4A6V A;  1Y1N A;  4IU6 A;  3PKD A;  5CLS A;  4IKU A;  4A6W A;  1B59 A;  5CDL A;  3MX6 A;  1XGM A;  5CE6 A;  2HOW A;  1R5G A;  2EA2 A;  2BHD A;  3Q6D A;  2P9A A;  2DFI A;  4U71 A;  5CIK A;  5FCH A;  4FO8 A;  3CB6 A;  4FO7 A;  3BIP A;  1C23 A;  2GGB A;  2BHB A;  3S6B A;  3PKE A;  2BHA A;  1W7V A;  1WY2 A;  3IG4 A;  4IKR A;  4U6W A;  4RZZ A;  1BOA A;  5JFR A;  1WBQ A;  3CB5 A;  1YVM A;  5E5B A;  2GU5 A;  1JAW A;  4FKC A;  5CDE A;  4OOK A;  1YW8 A;  3IU9 A;  1C24 A;  5JI6 A;  3CTZ A;  2NQ7 A;  1QXW A;  4FLJ A;  2NQ6 A;  4ZWO A;  1QZY A;  1XNZ A;  4IPA A;  4U6Z A;  2GG9 A;  3PKA A;  4S2T P;  3TAV A;  5D6F A;  2BWS A;  2GTX A;  4FLI A;  4B28 A;  2BN7 A;  1M35 A;  4ZNG A;  2EA4 A;  3I7M A;  4PV4 A;  2GG7 A;  1KP0 A;  4U1B A;  1C27 A;  2Q92 A;  3IL0 A;  2GG0 A;  2GU4 A;  3IU8 A;  3BIT A;  3BIQ A;  1R58 A;  2IW2 A;  3O5V A;  1PV9 A;  1QXY A;  3FM3 A;  2P98 A;  2Q96 A;  3OVK A;  3OOO A;  3RVA A;  4U6C A;  2GU7 A;  2BHC A;  1YW9 A;  3MAT A;  3ROR A;  2B3K A;  2Q93 A;  2Q8K A;  1WN1 A;  4U75 A;  1B6A A;  2B3L A;  2V3Z A;  4IDY A;  2P99 A;  1QXZ A;  2Q94 A;  2BWY A;  4MAT A;  5JHU A;  2Q95 A;  5D6E A;  1N51 A;  5E2C A;  4U69 A;  4U73 A;  2V3X A;  2GZ5 A;  1KQ0 A;  5CDV A;  4U6E A;  2ADU A;  2MAT A;  4S01 A;  1C21 A;  4HXX A;  4PNC A;  1A16 A;  5FCF A;  2BWX A;  2GG5 A;  2GA2 A;  2GU6 A;  1WLR A;  3QOC A;  4EGE A;  2EVC A;  3L24 A;  3PKC A;  2EVM A;  4QR8 A;  4IKT A;  1YW7 A;  1O0X A;  1R5H A;  4ZWU A;  3FMR A;  1XGO A;  4IF7 A;  3PKB A;  1C22 A;  3IU7 A;  4U6J A;  4JUQ A;  2OKN A;  4FLL A;  4ZWP A;  3L7G A;  1YJ3 A;  4Z7M A;  2V3Y A;  2ZSG A;  2B3H A;  4IEC A;  4U70 A;  3MR1 A;  4S2R P;  3PEB A;  4RZY A;  5CNX A;  3FMQ A;  2V6C A;  2BH3 A;  2BWW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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