4PV4A

Proline aminopeptidase p ii from yersinia pestis
Total Genus 158
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
158
sequence length
436
structure length
436
Chain Sequence
b'MTQQEYQNRRQALLAKMAPGSAAIIFAAPEATRSADSEYPYRQNSDFSYLTGFNEPEAVLILVKSDETHNHSVLFNRIRDLTAEIWFGRRLGQEAAPTKLAVDRALPFDEINEQLYLLLNRLDVIYHAQGQYAYADNIVFAALEKLRHGFRKNLRAPATLTDWRPWLHEMRLFKSAEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEILHEFTRHGARYPAYNTIVGGGENGCILHYTENECELRDGDLVLIDAGCEYRGYAGDITRTFPVNGKFTPAQRAVYDIVLAAINKSLTLFRPGTSIREVTEEVVRIMVVGLVELGILKGDIEQLIAEQAHRPFFMHGLSHWLGMDVHDVGDYGSSDRGRILEPGMVLTVEPGLYIAPDADVPPQYRGIGIRIEDDIVITATGNENLTASVVKDPDDIEALMALN'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Proline aminopeptidase P II
molecule tags Hydrolase
source organism Yersinia pestis
publication title Proline aminopeptidase P II from Yersinia pestis
rcsb
total genus 158
structure length 436
sequence length 436
chains with identical sequence B
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2014-03-14
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 4pv4A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4pv4A02
1C22A 1KP0A 5CDLA 4FUKA 4IKSA 4KM3A 1KQ9A 1W7VA 2BHBA 4PNCA 2V3ZA 3PKEA 2BWUA 5JHUA 4RZYA 2BWXA 1B59A 1WL9A 1B6AA 2B3KA 2DFIA 4IPAA 1YVMA 3MATA 2EA2A 1CHMA 1R5HA 2EVCA 3IU7A 2BWSA 2GG8A 3PKAA 5CNXA 2GU5A 5D6EA 1W2MA 1YW9A 1XNZA 1MATA 4OOKA 4IKTA 4FLJA 1PV9A 1KQ0A 3FMRA 2BHCA 3BITA 3CTZA 3FM3A 2MATA 1JAWA 2EVMA 2GU6A 3O5VA 2GGBA 1WLRA 4FO7A 1YJ3A 2EA4A 4Z7MA 2BB7A 1QXWA 4U71A 5D6FA 3CB5A 4U69A 1O0XA 2IW2A 3OOOA 2GG9A 4ZWPA 3IU8A 1R58A 1XGMA 1M35A 1WBQA 3IL0A 3QOCA 1R5GA 4FKCA 2GG3A 4HXXA 5CDEA 3I7MA 4ZWOA 2BN7A 4IU6A 4U6WA 5JFRA 4RZZA 2GU7A 2BHAA 2B3LA 4U75A 4S01A 2GA2A 2GZ5A 4PV4A 1YW7A 2GGCA 3BIPA 4S00A 2Q95A 4U6EA 3S6BA 5E2CA 3TAVA 1C27A 1XGSA 3PKBA 5FCHA 5CLSA 2BWTA 2Q8KA 4FLIA 4FLKA 3CB6A 3Q6DA 2ADUA 4S2RP 2OKNA 1C23A 5CIKA 4IECA 3OVKA 2GG2A 4U6CA 4A6VA 1WL6A 2GG5A 1A16A 2BHDA 2BWYA 4B28A 3MX6A 4A6WA 2GG7A 4U76A 1WKMA 1BN5A 5E5BA 4U73A 4RGZ1 2V3YA 3BIQA 2ZSGA 1QZYA 1XGNA 1QXZA 4MATA 5CE6A 2P9AA 3RORA 1WN1A 2V3XA 2G6PA 4S2TP 4IF7A 3PEBA 4EGEA 4ZWUA 2GU4A 2V6CA 4IKUA 2Q92A 2HOWA 5FCFA 3IG4A 1XGOA 2Q94A 1C21A 3PKCA 3TB5A 4U70A 5JI6A 3PKDA 4IDYA 4QR8A 2BWVA 2GG0A 1C24A 2B3HA 4FO8A 3IU9A 2Q93A 1N51A 3FMQA 4FLLA 2EVOA 4U1BA 3L7GA 2Q96A 4U6ZA 4ZNGA 4IKRA 3PN9A 5CDVA 4JUQA 3RVAA 1WY2A 2BWWA 2NQ6A 2P98A 3D27A 3MR1A 1BOAA 2GTXA 2P99A 4U6JA 1YW8A 1QXYA 2NQ7A 3L24A 2OAZA 2BH3A 4R60A 1Y1NA
chains in the Genus database with same CATH superfamily
1C22A 1KP0A 5CDLA 4FUKA 4IKSA 4KM3A 1KQ9A 1W7VA 2BHBA 4PNCA 2V3ZA 3PKEA 2BWUA 5JHUA 4RZYA 2BWXA 1B59A 1WL9A 1B6AA 2B3KA 2DFIA 4IPAA 1YVMA 3MATA 2EA2A 1CHMA 1R5HA 2EVCA 3IU7A 2BWSA 2GG8A 3PKAA 5CNXA 2GU5A 5D6EA 1W2MA 1YW9A 1XNZA 1MATA 4OOKA 4IKTA 4FLJA 1PV9A 1KQ0A 3FMRA 2BHCA 3BITA 3CTZA 3FM3A 2MATA 1JAWA 2EVMA 2GU6A 3O5VA 2GGBA 1WLRA 4FO7A 1YJ3A 2EA4A 4Z7MA 2BB7A 1QXWA 4U71A 5D6FA 3CB5A 4U69A 1O0XA 2IW2A 3OOOA 2GG9A 4ZWPA 3IU8A 1R58A 1XGMA 1M35A 1WBQA 3IL0A 3QOCA 1R5GA 4FKCA 2GG3A 4HXXA 5CDEA 3I7MA 4ZWOA 2BN7A 4IU6A 4U6WA 5JFRA 4RZZA 2GU7A 2BHAA 2B3LA 4U75A 4S01A 2GA2A 2GZ5A 4PV4A 1YW7A 2GGCA 3BIPA 4S00A 2Q95A 4U6EA 3S6BA 5E2CA 3TAVA 1C27A 1XGSA 3PKBA 5FCHA 5CLSA 2BWTA 2Q8KA 4FLIA 4FLKA 3CB6A 3Q6DA 2ADUA 4S2RP 2OKNA 1C23A 5CIKA 4IECA 3OVKA 2GG2A 4U6CA 4A6VA 1WL6A 2GG5A 1A16A 2BHDA 2BWYA 4B28A 3MX6A 4A6WA 2GG7A 4U76A 1WKMA 1BN5A 5E5BA 4U73A 4RGZ1 2V3YA 3BIQA 2ZSGA 1QZYA 1XGNA 1QXZA 4MATA 5CE6A 2P9AA 3RORA 1WN1A 2V3XA 2G6PA 4S2TP 4IF7A 3PEBA 4EGEA 4ZWUA 2GU4A 2V6CA 4IKUA 2Q92A 2HOWA 5FCFA 3IG4A 1XGOA 2Q94A 1C21A 3PKCA 3TB5A 4U70A 5JI6A 3PKDA 4IDYA 4QR8A 2BWVA 2GG0A 1C24A 2B3HA 4FO8A 3IU9A 2Q93A 1N51A 3FMQA 4FLLA 2EVOA 4U1BA 3L7GA 2Q96A 4U6ZA 4ZNGA 4IKRA 3PN9A 5CDVA 4JUQA 3RVAA 1WY2A 2BWWA 2NQ6A 2P98A 3D27A 3MR1A 1BOAA 2GTXA 2P99A 4U6JA 1YW8A 1QXYA 2NQ7A 3L24A 2OAZA 2BH3A 4R60A 1Y1NA
chains in the Genus database with same CATH topology
1C22A 1KP0A 5CDLA 4FUKA 4IKSA 4KM3A 1KQ9A 1W7VA 2BHBA 4PNCA 2V3ZA 3PKEA 2BWUA 5JHUA 4RZYA 2BWXA 1B59A 1WL9A 1B6AA 2B3KA 2DFIA 4IPAA 1YVMA 3MATA 2EA2A 1CHMA 1R5HA 2EVCA 3IU7A 2BWSA 2GG8A 3PKAA 5CNXA 2GU5A 5D6EA 1W2MA 1YW9A 1XNZA 1MATA 4OOKA 4IKTA 4FLJA 1PV9A 1KQ0A 3FMRA 2BHCA 3BITA 3CTZA 3FM3A 2MATA 1JAWA 2EVMA 2GU6A 3O5VA 2GGBA 1WLRA 4FO7A 1YJ3A 2EA4A 4Z7MA 2BB7A 1QXWA 4U71A 5D6FA 3CB5A 4U69A 1O0XA 2IW2A 3OOOA 2GG9A 4ZWPA 3IU8A 1R58A 1XGMA 1M35A 1WBQA 3IL0A 3QOCA 1R5GA 4FKCA 2GG3A 4HXXA 5CDEA 3I7MA 4ZWOA 2BN7A 4IU6A 4U6WA 5JFRA 4RZZA 2GU7A 2BHAA 2B3LA 4U75A 4S01A 2GA2A 2GZ5A 4PV4A 1YW7A 2GGCA 3BIPA 4S00A 2Q95A 4U6EA 3S6BA 5E2CA 3TAVA 1C27A 1XGSA 3PKBA 5FCHA 5CLSA 2BWTA 2Q8KA 4FLIA 4FLKA 3CB6A 3Q6DA 2ADUA 4S2RP 2OKNA 1C23A 5CIKA 4IECA 3OVKA 2GG2A 4U6CA 4A6VA 1WL6A 2GG5A 1A16A 2BHDA 2BWYA 4B28A 3MX6A 4A6WA 2GG7A 4U76A 1WKMA 1BN5A 5E5BA 4U73A 4RGZ1 2V3YA 3BIQA 2ZSGA 1QZYA 1XGNA 1QXZA 4MATA 5CE6A 2P9AA 3RORA 1WN1A 2V3XA 2G6PA 4S2TP 4IF7A 3PEBA 4EGEA 4ZWUA 2GU4A 2V6CA 4IKUA 2Q92A 2HOWA 5FCFA 3IG4A 1XGOA 2Q94A 1C21A 3PKCA 3TB5A 4U70A 5JI6A 3PKDA 4IDYA 4QR8A 2BWVA 2GG0A 1C24A 2B3HA 4FO8A 3IU9A 2Q93A 1N51A 3FMQA 4FLLA 2EVOA 4U1BA 3L7GA 2Q96A 4U6ZA 4ZNGA 4IKRA 3PN9A 5CDVA 4JUQA 3RVAA 1WY2A 2BWWA 2NQ6A 2P98A 3D27A 3MR1A 1BOAA 2GTXA 2P99A 4U6JA 1YW8A 1QXYA 2NQ7A 3L24A 2OAZA 2BH3A 4R60A 1Y1NA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1C22 A;  1KP0 A;  5CDL A;  4FUK A;  4IKS A;  4KM3 A;  1KQ9 A;  1W7V A;  2BHB A;  4PNC A;  2V3Z A;  3PKE A;  2BWU A;  5JHU A;  4RZY A;  2BWX A;  1B59 A;  1WL9 A;  1B6A A;  2B3K A;  2DFI A;  4IPA A;  1YVM A;  3MAT A;  2EA2 A;  1CHM A;  1R5H A;  2EVC A;  3IU7 A;  2BWS A;  2GG8 A;  3PKA A;  5CNX A;  2GU5 A;  5D6E A;  1W2M A;  1YW9 A;  1XNZ A;  1MAT A;  4OOK A;  4IKT A;  4FLJ A;  1PV9 A;  1KQ0 A;  3FMR A;  2BHC A;  3BIT A;  3CTZ A;  3FM3 A;  2MAT A;  1JAW A;  2EVM A;  2GU6 A;  3O5V A;  2GGB A;  1WLR A;  4FO7 A;  1YJ3 A;  2EA4 A;  4Z7M A;  2BB7 A;  1QXW A;  4U71 A;  5D6F A;  3CB5 A;  4U69 A;  1O0X A;  2IW2 A;  3OOO A;  2GG9 A;  4ZWP A;  3IU8 A;  1R58 A;  1XGM A;  1M35 A;  1WBQ A;  3IL0 A;  3QOC A;  1R5G A;  4FKC A;  2GG3 A;  4HXX A;  5CDE A;  3I7M A;  4ZWO A;  2BN7 A;  4IU6 A;  4U6W A;  5JFR A;  4RZZ A;  2GU7 A;  2BHA A;  2B3L A;  4U75 A;  4S01 A;  2GA2 A;  2GZ5 A;  4PV4 A;  1YW7 A;  2GGC A;  3BIP A;  4S00 A;  2Q95 A;  4U6E A;  3S6B A;  5E2C A;  3TAV A;  1C27 A;  1XGS A;  3PKB A;  5FCH A;  5CLS A;  2BWT A;  2Q8K A;  4FLI A;  4FLK A;  3CB6 A;  3Q6D A;  2ADU A;  4S2R P;  2OKN A;  1C23 A;  5CIK A;  4IEC A;  3OVK A;  2GG2 A;  4U6C A;  4A6V A;  1WL6 A;  2GG5 A;  1A16 A;  2BHD A;  2BWY A;  4B28 A;  3MX6 A;  4A6W A;  2GG7 A;  4U76 A;  1WKM A;  1BN5 A;  5E5B A;  4U73 A;  4RGZ 1;  2V3Y A;  3BIQ A;  2ZSG A;  1QZY A;  1XGN A;  1QXZ A;  4MAT A;  5CE6 A;  2P9A A;  3ROR A;  1WN1 A;  2V3X A;  2G6P A;  4S2T P;  4IF7 A;  3PEB A;  4EGE A;  4ZWU A;  2GU4 A;  2V6C A;  4IKU A;  2Q92 A;  2HOW A;  5FCF A;  3IG4 A;  1XGO A;  2Q94 A;  1C21 A;  3PKC A;  3TB5 A;  4U70 A;  5JI6 A;  3PKD A;  4IDY A;  4QR8 A;  2BWV A;  2GG0 A;  1C24 A;  2B3H A;  4FO8 A;  3IU9 A;  2Q93 A;  1N51 A;  3FMQ A;  4FLL A;  2EVO A;  4U1B A;  3L7G A;  2Q96 A;  4U6Z A;  4ZNG A;  4IKR A;  3PN9 A;  5CDV A;  4JUQ A;  3RVA A;  1WY2 A;  2BWW A;  2NQ6 A;  2P98 A;  3D27 A;  3MR1 A;  1BOA A;  2GTX A;  2P99 A;  4U6J A;  1YW8 A;  1QXY A;  2NQ7 A;  3L24 A;  2OAZ A;  2BH3 A;  4R60 A;  1Y1N A; 
#chains in the Genus database with same CATH topology
 1C22 A;  1KP0 A;  5CDL A;  4FUK A;  4IKS A;  4KM3 A;  1KQ9 A;  1W7V A;  2BHB A;  4PNC A;  2V3Z A;  3PKE A;  2BWU A;  5JHU A;  4RZY A;  2BWX A;  1B59 A;  1WL9 A;  1B6A A;  2B3K A;  2DFI A;  4IPA A;  1YVM A;  3MAT A;  2EA2 A;  1CHM A;  1R5H A;  2EVC A;  3IU7 A;  2BWS A;  2GG8 A;  3PKA A;  5CNX A;  2GU5 A;  5D6E A;  1W2M A;  1YW9 A;  1XNZ A;  1MAT A;  4OOK A;  4IKT A;  4FLJ A;  1PV9 A;  1KQ0 A;  3FMR A;  2BHC A;  3BIT A;  3CTZ A;  3FM3 A;  2MAT A;  1JAW A;  2EVM A;  2GU6 A;  3O5V A;  2GGB A;  1WLR A;  4FO7 A;  1YJ3 A;  2EA4 A;  4Z7M A;  2BB7 A;  1QXW A;  4U71 A;  5D6F A;  3CB5 A;  4U69 A;  1O0X A;  2IW2 A;  3OOO A;  2GG9 A;  4ZWP A;  3IU8 A;  1R58 A;  1XGM A;  1M35 A;  1WBQ A;  3IL0 A;  3QOC A;  1R5G A;  4FKC A;  2GG3 A;  4HXX A;  5CDE A;  3I7M A;  4ZWO A;  2BN7 A;  4IU6 A;  4U6W A;  5JFR A;  4RZZ A;  2GU7 A;  2BHA A;  2B3L A;  4U75 A;  4S01 A;  2GA2 A;  2GZ5 A;  4PV4 A;  1YW7 A;  2GGC A;  3BIP A;  4S00 A;  2Q95 A;  4U6E A;  3S6B A;  5E2C A;  3TAV A;  1C27 A;  1XGS A;  3PKB A;  5FCH A;  5CLS A;  2BWT A;  2Q8K A;  4FLI A;  4FLK A;  3CB6 A;  3Q6D A;  2ADU A;  4S2R P;  2OKN A;  1C23 A;  5CIK A;  4IEC A;  3OVK A;  2GG2 A;  4U6C A;  4A6V A;  1WL6 A;  2GG5 A;  1A16 A;  2BHD A;  2BWY A;  4B28 A;  3MX6 A;  4A6W A;  2GG7 A;  4U76 A;  1WKM A;  1BN5 A;  5E5B A;  4U73 A;  4RGZ 1;  2V3Y A;  3BIQ A;  2ZSG A;  1QZY A;  1XGN A;  1QXZ A;  4MAT A;  5CE6 A;  2P9A A;  3ROR A;  1WN1 A;  2V3X A;  2G6P A;  4S2T P;  4IF7 A;  3PEB A;  4EGE A;  4ZWU A;  2GU4 A;  2V6C A;  4IKU A;  2Q92 A;  2HOW A;  5FCF A;  3IG4 A;  1XGO A;  2Q94 A;  1C21 A;  3PKC A;  3TB5 A;  4U70 A;  5JI6 A;  3PKD A;  4IDY A;  4QR8 A;  2BWV A;  2GG0 A;  1C24 A;  2B3H A;  4FO8 A;  3IU9 A;  2Q93 A;  1N51 A;  3FMQ A;  4FLL A;  2EVO A;  4U1B A;  3L7G A;  2Q96 A;  4U6Z A;  4ZNG A;  4IKR A;  3PN9 A;  5CDV A;  4JUQ A;  3RVA A;  1WY2 A;  2BWW A;  2NQ6 A;  2P98 A;  3D27 A;  3MR1 A;  1BOA A;  2GTX A;  2P99 A;  4U6J A;  1YW8 A;  1QXY A;  2NQ7 A;  3L24 A;  2OAZ A;  2BH3 A;  4R60 A;  1Y1N A; 
#chains in the Genus database with same CATH homology
 1C22 A;  1KP0 A;  5CDL A;  4FUK A;  4IKS A;  4KM3 A;  1KQ9 A;  1W7V A;  2BHB A;  4PNC A;  2V3Z A;  3PKE A;  2BWU A;  5JHU A;  4RZY A;  2BWX A;  1B59 A;  1WL9 A;  1B6A A;  2B3K A;  2DFI A;  4IPA A;  1YVM A;  3MAT A;  2EA2 A;  1CHM A;  1R5H A;  2EVC A;  3IU7 A;  2BWS A;  2GG8 A;  3PKA A;  5CNX A;  2GU5 A;  5D6E A;  1W2M A;  1YW9 A;  1XNZ A;  1MAT A;  4OOK A;  4IKT A;  4FLJ A;  1PV9 A;  1KQ0 A;  3FMR A;  2BHC A;  3BIT A;  3CTZ A;  3FM3 A;  2MAT A;  1JAW A;  2EVM A;  2GU6 A;  3O5V A;  2GGB A;  1WLR A;  4FO7 A;  1YJ3 A;  2EA4 A;  4Z7M A;  2BB7 A;  1QXW A;  4U71 A;  5D6F A;  3CB5 A;  4U69 A;  1O0X A;  2IW2 A;  3OOO A;  2GG9 A;  4ZWP A;  3IU8 A;  1R58 A;  1XGM A;  1M35 A;  1WBQ A;  3IL0 A;  3QOC A;  1R5G A;  4FKC A;  2GG3 A;  4HXX A;  5CDE A;  3I7M A;  4ZWO A;  2BN7 A;  4IU6 A;  4U6W A;  5JFR A;  4RZZ A;  2GU7 A;  2BHA A;  2B3L A;  4U75 A;  4S01 A;  2GA2 A;  2GZ5 A;  4PV4 A;  1YW7 A;  2GGC A;  3BIP A;  4S00 A;  2Q95 A;  4U6E A;  3S6B A;  5E2C A;  3TAV A;  1C27 A;  1XGS A;  3PKB A;  5FCH A;  5CLS A;  2BWT A;  2Q8K A;  4FLI A;  4FLK A;  3CB6 A;  3Q6D A;  2ADU A;  4S2R P;  2OKN A;  1C23 A;  5CIK A;  4IEC A;  3OVK A;  2GG2 A;  4U6C A;  4A6V A;  1WL6 A;  2GG5 A;  1A16 A;  2BHD A;  2BWY A;  4B28 A;  3MX6 A;  4A6W A;  2GG7 A;  4U76 A;  1WKM A;  1BN5 A;  5E5B A;  4U73 A;  4RGZ 1;  2V3Y A;  3BIQ A;  2ZSG A;  1QZY A;  1XGN A;  1QXZ A;  4MAT A;  5CE6 A;  2P9A A;  3ROR A;  1WN1 A;  2V3X A;  2G6P A;  4S2T P;  4IF7 A;  3PEB A;  4EGE A;  4ZWU A;  2GU4 A;  2V6C A;  4IKU A;  2Q92 A;  2HOW A;  5FCF A;  3IG4 A;  1XGO A;  2Q94 A;  1C21 A;  3PKC A;  3TB5 A;  4U70 A;  5JI6 A;  3PKD A;  4IDY A;  4QR8 A;  2BWV A;  2GG0 A;  1C24 A;  2B3H A;  4FO8 A;  3IU9 A;  2Q93 A;  1N51 A;  3FMQ A;  4FLL A;  2EVO A;  4U1B A;  3L7G A;  2Q96 A;  4U6Z A;  4ZNG A;  4IKR A;  3PN9 A;  5CDV A;  4JUQ A;  3RVA A;  1WY2 A;  2BWW A;  2NQ6 A;  2P98 A;  3D27 A;  3MR1 A;  1BOA A;  2GTX A;  2P99 A;  4U6J A;  1YW8 A;  1QXY A;  2NQ7 A;  3L24 A;  2OAZ A;  2BH3 A;  4R60 A;  1Y1N A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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