4ZWUA

Crystal structure of organophosphate anhydrolase/prolidase mutant y212f, v342l, i215y
Total Genus 154
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
154
sequence length
439
structure length
435
Chain Sequence
NKLAVLYAEHIATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWHKVEPNEYWADYFDIELLVKPDQVEKLLPYDKARFAYIGEYLEVAQALGFELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLATQHSENDTPFGNYVALNENCAILHYTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTGEGEFAELVATMKQHQIALCNQLAPGKLYGELHLDCHQRVAQTLSDFNIVNLSADEIVAKGITSTFFPHGLGHHIGLQLHDVGGFMADEQGAHQEPGHPFLRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSLENMTRELELD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Hydrolase
source organism Alteromonas sp.
publication title Engineering the Organophosphorus Acid Anhydrolase Enzyme for Increased Catalytic Efficiency and Broadened Stereospecificity on Russian VX.
pubmed doi rcsb
molecule keywords ORGANOPHOSPHATE ANHYDROLASE/PROLIDASE
total genus 154
structure length 435
sequence length 439
chains with identical sequence B
ec nomenclature ec 3.1.8.1: Aryldialkylphosphatase.
pdb deposition date 2015-05-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 4zwuA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4zwuA02
1Y1NA 1YW7A 2Q96A 2GG8A 2BH3A 4IDYA 4IU6A 3IL0A 4A6WA 2BHBA 1QXZA 5CE6A 2GGBA 3D27A 4FLKA 4S01A 2Q92A 5CNXA 1PV9A 1QXWA 5D6FA 2EVCA 2Q95A 1WKMA 3S6BA 4U76A 5FCFA 4U6WA 3Q6DA 2EA4A 2P98A 4B28A 4U69A 4FLLA 1CHMA 2V3XA 4PV4A 4S2TP 2EA2A 2Q8KA 4RGZ1 4QR8A 4FLIA 2BWVA 3TB5A 1C22A 2B3KA 4U6ZA 1W7VA 3OVKA 4U6JA 3PKCA 2BHCA 2IW2A 3BIQA 4R60A 5CDVA 1KQ0A 1MATA 4Z7MA 4U1BA 3PN9A 1O0XA 2GU7A 1A16A 1KP0A 2BHAA 4FLJA 1YW9A 4FUKA 4A6VA 2B3HA 4IKUA 2V3ZA 4U71A 4FKCA 2BB7A 4IPAA 2GG0A 4FO7A 2BN7A 1B6AA 5E5BA 4IKSA 1WY2A 2GTXA 2EVOA 5FCHA 1XGSA 3IU9A 2BWSA 4U75A 3FMRA 2GG9A 4ZWOA 3MR1A 2B3LA 3PEBA 1N51A 2P9AA 2GA2A 1XGNA 2OKNA 2GU4A 2ADUA 3BITA 1C24A 1C27A 2DFIA 2ZSGA 4S2RP 5D6EA 2NQ7A 1R5GA 2OAZA 4U73A 3L24A 4HXXA 2GU6A 1WL9A 1WLRA 3IU7A 1KQ9A 2Q93A 4RZZA 1BN5A 2GU5A 4OOKA 5CLSA 2GG5A 1W2MA 3OOOA 3FMQA 3RVAA 2BWUA 3PKBA 4FO8A 1QXYA 3L7GA 2BWXA 4MATA 1M35A 3PKAA 4PNCA 4U70A 4IKRA 2Q94A 2BHDA 3MX6A 2G6PA 3IG4A 2BWTA 4IECA 4S00A 3BIPA 2BWWA 3MATA 4RZYA 1YW8A 1JAWA 3QOCA 2GGCA 1YVMA 3RORA 3TAVA 2V6CA 3FM3A 2EVMA 4ZWUA 2GG7A 3CTZA 4U6EA 2GZ5A 3CB6A 1XNZA 3CB5A 1R58A 1XGOA 3I7MA 1WBQA 4IKTA 4JUQA 4ZNGA 1QZYA 2GG3A 5CDEA 1R5HA 4U6CA 1YJ3A 2HOWA 1C21A 1XGMA 2NQ6A 1WN1A 2BWYA 5JFRA 3O5VA 3PKDA 2MATA 3IU8A 1BOAA 1C23A 4KM3A 3PKEA 5JI6A 1WL6A 2P99A 2V3YA 5CIKA 4ZWPA 4EGEA 1B59A 5E2CA 4IF7A 5CDLA 2GG2A 5JHUA
chains in the Genus database with same CATH superfamily
1Y1NA 1YW7A 2Q96A 2GG8A 2BH3A 4IDYA 4IU6A 3IL0A 4A6WA 2BHBA 1QXZA 5CE6A 2GGBA 3D27A 4FLKA 4S01A 2Q92A 5CNXA 1PV9A 1QXWA 5D6FA 2EVCA 2Q95A 1WKMA 3S6BA 4U76A 5FCFA 4U6WA 3Q6DA 2EA4A 2P98A 4B28A 4U69A 4FLLA 1CHMA 2V3XA 4PV4A 4S2TP 2EA2A 2Q8KA 4RGZ1 4QR8A 4FLIA 2BWVA 3TB5A 1C22A 2B3KA 4U6ZA 1W7VA 3OVKA 4U6JA 3PKCA 2BHCA 2IW2A 3BIQA 4R60A 5CDVA 1KQ0A 1MATA 4Z7MA 4U1BA 3PN9A 1O0XA 2GU7A 1A16A 1KP0A 2BHAA 4FLJA 1YW9A 4FUKA 4A6VA 2B3HA 4IKUA 2V3ZA 4U71A 4FKCA 2BB7A 4IPAA 2GG0A 4FO7A 2BN7A 1B6AA 5E5BA 4IKSA 1WY2A 2GTXA 2EVOA 5FCHA 1XGSA 3IU9A 2BWSA 4U75A 3FMRA 2GG9A 4ZWOA 3MR1A 2B3LA 3PEBA 1N51A 2P9AA 2GA2A 1XGNA 2OKNA 2GU4A 2ADUA 3BITA 1C24A 1C27A 2DFIA 2ZSGA 4S2RP 5D6EA 2NQ7A 1R5GA 2OAZA 4U73A 3L24A 4HXXA 2GU6A 1WL9A 1WLRA 3IU7A 1KQ9A 2Q93A 4RZZA 1BN5A 2GU5A 4OOKA 5CLSA 2GG5A 1W2MA 3OOOA 3FMQA 3RVAA 2BWUA 3PKBA 4FO8A 1QXYA 3L7GA 2BWXA 4MATA 1M35A 3PKAA 4PNCA 4U70A 4IKRA 2Q94A 2BHDA 3MX6A 2G6PA 3IG4A 2BWTA 4IECA 4S00A 3BIPA 2BWWA 3MATA 4RZYA 1YW8A 1JAWA 3QOCA 2GGCA 1YVMA 3RORA 3TAVA 2V6CA 3FM3A 2EVMA 4ZWUA 2GG7A 3CTZA 4U6EA 2GZ5A 3CB6A 1XNZA 3CB5A 1R58A 1XGOA 3I7MA 1WBQA 4IKTA 4JUQA 4ZNGA 1QZYA 2GG3A 5CDEA 1R5HA 4U6CA 1YJ3A 2HOWA 1C21A 1XGMA 2NQ6A 1WN1A 2BWYA 5JFRA 3O5VA 3PKDA 2MATA 3IU8A 1BOAA 1C23A 4KM3A 3PKEA 5JI6A 1WL6A 2P99A 2V3YA 5CIKA 4ZWPA 4EGEA 1B59A 5E2CA 4IF7A 5CDLA 2GG2A 5JHUA
chains in the Genus database with same CATH topology
1Y1NA 1YW7A 2Q96A 2GG8A 2BH3A 4IDYA 4IU6A 3IL0A 4A6WA 2BHBA 1QXZA 5CE6A 2GGBA 3D27A 4FLKA 4S01A 2Q92A 5CNXA 1PV9A 1QXWA 5D6FA 2EVCA 2Q95A 1WKMA 3S6BA 4U76A 5FCFA 4U6WA 3Q6DA 2EA4A 2P98A 4B28A 4U69A 4FLLA 1CHMA 2V3XA 4PV4A 4S2TP 2EA2A 2Q8KA 4RGZ1 4QR8A 4FLIA 2BWVA 3TB5A 1C22A 2B3KA 4U6ZA 1W7VA 3OVKA 4U6JA 3PKCA 2BHCA 2IW2A 3BIQA 4R60A 5CDVA 1KQ0A 1MATA 4Z7MA 4U1BA 3PN9A 1O0XA 2GU7A 1A16A 1KP0A 2BHAA 4FLJA 1YW9A 4FUKA 4A6VA 2B3HA 4IKUA 2V3ZA 4U71A 4FKCA 2BB7A 4IPAA 2GG0A 4FO7A 2BN7A 1B6AA 5E5BA 4IKSA 1WY2A 2GTXA 2EVOA 5FCHA 1XGSA 3IU9A 2BWSA 4U75A 3FMRA 2GG9A 4ZWOA 3MR1A 2B3LA 3PEBA 1N51A 2P9AA 2GA2A 1XGNA 2OKNA 2GU4A 2ADUA 3BITA 1C24A 1C27A 2DFIA 2ZSGA 4S2RP 5D6EA 2NQ7A 1R5GA 2OAZA 4U73A 3L24A 4HXXA 2GU6A 1WL9A 1WLRA 3IU7A 1KQ9A 2Q93A 4RZZA 1BN5A 2GU5A 4OOKA 5CLSA 2GG5A 1W2MA 3OOOA 3FMQA 3RVAA 2BWUA 3PKBA 4FO8A 1QXYA 3L7GA 2BWXA 4MATA 1M35A 3PKAA 4PNCA 4U70A 4IKRA 2Q94A 2BHDA 3MX6A 2G6PA 3IG4A 2BWTA 4IECA 4S00A 3BIPA 2BWWA 3MATA 4RZYA 1YW8A 1JAWA 3QOCA 2GGCA 1YVMA 3RORA 3TAVA 2V6CA 3FM3A 2EVMA 4ZWUA 2GG7A 3CTZA 4U6EA 2GZ5A 3CB6A 1XNZA 3CB5A 1R58A 1XGOA 3I7MA 1WBQA 4IKTA 4JUQA 4ZNGA 1QZYA 2GG3A 5CDEA 1R5HA 4U6CA 1YJ3A 2HOWA 1C21A 1XGMA 2NQ6A 1WN1A 2BWYA 5JFRA 3O5VA 3PKDA 2MATA 3IU8A 1BOAA 1C23A 4KM3A 3PKEA 5JI6A 1WL6A 2P99A 2V3YA 5CIKA 4ZWPA 4EGEA 1B59A 5E2CA 4IF7A 5CDLA 2GG2A 5JHUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1Y1N A;  1YW7 A;  2Q96 A;  2GG8 A;  2BH3 A;  4IDY A;  4IU6 A;  3IL0 A;  4A6W A;  2BHB A;  1QXZ A;  5CE6 A;  2GGB A;  3D27 A;  4FLK A;  4S01 A;  2Q92 A;  5CNX A;  1PV9 A;  1QXW A;  5D6F A;  2EVC A;  2Q95 A;  1WKM A;  3S6B A;  4U76 A;  5FCF A;  4U6W A;  3Q6D A;  2EA4 A;  2P98 A;  4B28 A;  4U69 A;  4FLL A;  1CHM A;  2V3X A;  4PV4 A;  4S2T P;  2EA2 A;  2Q8K A;  4RGZ 1;  4QR8 A;  4FLI A;  2BWV A;  3TB5 A;  1C22 A;  2B3K A;  4U6Z A;  1W7V A;  3OVK A;  4U6J A;  3PKC A;  2BHC A;  2IW2 A;  3BIQ A;  4R60 A;  5CDV A;  1KQ0 A;  1MAT A;  4Z7M A;  4U1B A;  3PN9 A;  1O0X A;  2GU7 A;  1A16 A;  1KP0 A;  2BHA A;  4FLJ A;  1YW9 A;  4FUK A;  4A6V A;  2B3H A;  4IKU A;  2V3Z A;  4U71 A;  4FKC A;  2BB7 A;  4IPA A;  2GG0 A;  4FO7 A;  2BN7 A;  1B6A A;  5E5B A;  4IKS A;  1WY2 A;  2GTX A;  2EVO A;  5FCH A;  1XGS A;  3IU9 A;  2BWS A;  4U75 A;  3FMR A;  2GG9 A;  4ZWO A;  3MR1 A;  2B3L A;  3PEB A;  1N51 A;  2P9A A;  2GA2 A;  1XGN A;  2OKN A;  2GU4 A;  2ADU A;  3BIT A;  1C24 A;  1C27 A;  2DFI A;  2ZSG A;  4S2R P;  5D6E A;  2NQ7 A;  1R5G A;  2OAZ A;  4U73 A;  3L24 A;  4HXX A;  2GU6 A;  1WL9 A;  1WLR A;  3IU7 A;  1KQ9 A;  2Q93 A;  4RZZ A;  1BN5 A;  2GU5 A;  4OOK A;  5CLS A;  2GG5 A;  1W2M A;  3OOO A;  3FMQ A;  3RVA A;  2BWU A;  3PKB A;  4FO8 A;  1QXY A;  3L7G A;  2BWX A;  4MAT A;  1M35 A;  3PKA A;  4PNC A;  4U70 A;  4IKR A;  2Q94 A;  2BHD A;  3MX6 A;  2G6P A;  3IG4 A;  2BWT A;  4IEC A;  4S00 A;  3BIP A;  2BWW A;  3MAT A;  4RZY A;  1YW8 A;  1JAW A;  3QOC A;  2GGC A;  1YVM A;  3ROR A;  3TAV A;  2V6C A;  3FM3 A;  2EVM A;  4ZWU A;  2GG7 A;  3CTZ A;  4U6E A;  2GZ5 A;  3CB6 A;  1XNZ A;  3CB5 A;  1R58 A;  1XGO A;  3I7M A;  1WBQ A;  4IKT A;  4JUQ A;  4ZNG A;  1QZY A;  2GG3 A;  5CDE A;  1R5H A;  4U6C A;  1YJ3 A;  2HOW A;  1C21 A;  1XGM A;  2NQ6 A;  1WN1 A;  2BWY A;  5JFR A;  3O5V A;  3PKD A;  2MAT A;  3IU8 A;  1BOA A;  1C23 A;  4KM3 A;  3PKE A;  5JI6 A;  1WL6 A;  2P99 A;  2V3Y A;  5CIK A;  4ZWP A;  4EGE A;  1B59 A;  5E2C A;  4IF7 A;  5CDL A;  2GG2 A;  5JHU A; 
#chains in the Genus database with same CATH topology
 1Y1N A;  1YW7 A;  2Q96 A;  2GG8 A;  2BH3 A;  4IDY A;  4IU6 A;  3IL0 A;  4A6W A;  2BHB A;  1QXZ A;  5CE6 A;  2GGB A;  3D27 A;  4FLK A;  4S01 A;  2Q92 A;  5CNX A;  1PV9 A;  1QXW A;  5D6F A;  2EVC A;  2Q95 A;  1WKM A;  3S6B A;  4U76 A;  5FCF A;  4U6W A;  3Q6D A;  2EA4 A;  2P98 A;  4B28 A;  4U69 A;  4FLL A;  1CHM A;  2V3X A;  4PV4 A;  4S2T P;  2EA2 A;  2Q8K A;  4RGZ 1;  4QR8 A;  4FLI A;  2BWV A;  3TB5 A;  1C22 A;  2B3K A;  4U6Z A;  1W7V A;  3OVK A;  4U6J A;  3PKC A;  2BHC A;  2IW2 A;  3BIQ A;  4R60 A;  5CDV A;  1KQ0 A;  1MAT A;  4Z7M A;  4U1B A;  3PN9 A;  1O0X A;  2GU7 A;  1A16 A;  1KP0 A;  2BHA A;  4FLJ A;  1YW9 A;  4FUK A;  4A6V A;  2B3H A;  4IKU A;  2V3Z A;  4U71 A;  4FKC A;  2BB7 A;  4IPA A;  2GG0 A;  4FO7 A;  2BN7 A;  1B6A A;  5E5B A;  4IKS A;  1WY2 A;  2GTX A;  2EVO A;  5FCH A;  1XGS A;  3IU9 A;  2BWS A;  4U75 A;  3FMR A;  2GG9 A;  4ZWO A;  3MR1 A;  2B3L A;  3PEB A;  1N51 A;  2P9A A;  2GA2 A;  1XGN A;  2OKN A;  2GU4 A;  2ADU A;  3BIT A;  1C24 A;  1C27 A;  2DFI A;  2ZSG A;  4S2R P;  5D6E A;  2NQ7 A;  1R5G A;  2OAZ A;  4U73 A;  3L24 A;  4HXX A;  2GU6 A;  1WL9 A;  1WLR A;  3IU7 A;  1KQ9 A;  2Q93 A;  4RZZ A;  1BN5 A;  2GU5 A;  4OOK A;  5CLS A;  2GG5 A;  1W2M A;  3OOO A;  3FMQ A;  3RVA A;  2BWU A;  3PKB A;  4FO8 A;  1QXY A;  3L7G A;  2BWX A;  4MAT A;  1M35 A;  3PKA A;  4PNC A;  4U70 A;  4IKR A;  2Q94 A;  2BHD A;  3MX6 A;  2G6P A;  3IG4 A;  2BWT A;  4IEC A;  4S00 A;  3BIP A;  2BWW A;  3MAT A;  4RZY A;  1YW8 A;  1JAW A;  3QOC A;  2GGC A;  1YVM A;  3ROR A;  3TAV A;  2V6C A;  3FM3 A;  2EVM A;  4ZWU A;  2GG7 A;  3CTZ A;  4U6E A;  2GZ5 A;  3CB6 A;  1XNZ A;  3CB5 A;  1R58 A;  1XGO A;  3I7M A;  1WBQ A;  4IKT A;  4JUQ A;  4ZNG A;  1QZY A;  2GG3 A;  5CDE A;  1R5H A;  4U6C A;  1YJ3 A;  2HOW A;  1C21 A;  1XGM A;  2NQ6 A;  1WN1 A;  2BWY A;  5JFR A;  3O5V A;  3PKD A;  2MAT A;  3IU8 A;  1BOA A;  1C23 A;  4KM3 A;  3PKE A;  5JI6 A;  1WL6 A;  2P99 A;  2V3Y A;  5CIK A;  4ZWP A;  4EGE A;  1B59 A;  5E2C A;  4IF7 A;  5CDL A;  2GG2 A;  5JHU A; 
#chains in the Genus database with same CATH homology
 1Y1N A;  1YW7 A;  2Q96 A;  2GG8 A;  2BH3 A;  4IDY A;  4IU6 A;  3IL0 A;  4A6W A;  2BHB A;  1QXZ A;  5CE6 A;  2GGB A;  3D27 A;  4FLK A;  4S01 A;  2Q92 A;  5CNX A;  1PV9 A;  1QXW A;  5D6F A;  2EVC A;  2Q95 A;  1WKM A;  3S6B A;  4U76 A;  5FCF A;  4U6W A;  3Q6D A;  2EA4 A;  2P98 A;  4B28 A;  4U69 A;  4FLL A;  1CHM A;  2V3X A;  4PV4 A;  4S2T P;  2EA2 A;  2Q8K A;  4RGZ 1;  4QR8 A;  4FLI A;  2BWV A;  3TB5 A;  1C22 A;  2B3K A;  4U6Z A;  1W7V A;  3OVK A;  4U6J A;  3PKC A;  2BHC A;  2IW2 A;  3BIQ A;  4R60 A;  5CDV A;  1KQ0 A;  1MAT A;  4Z7M A;  4U1B A;  3PN9 A;  1O0X A;  2GU7 A;  1A16 A;  1KP0 A;  2BHA A;  4FLJ A;  1YW9 A;  4FUK A;  4A6V A;  2B3H A;  4IKU A;  2V3Z A;  4U71 A;  4FKC A;  2BB7 A;  4IPA A;  2GG0 A;  4FO7 A;  2BN7 A;  1B6A A;  5E5B A;  4IKS A;  1WY2 A;  2GTX A;  2EVO A;  5FCH A;  1XGS A;  3IU9 A;  2BWS A;  4U75 A;  3FMR A;  2GG9 A;  4ZWO A;  3MR1 A;  2B3L A;  3PEB A;  1N51 A;  2P9A A;  2GA2 A;  1XGN A;  2OKN A;  2GU4 A;  2ADU A;  3BIT A;  1C24 A;  1C27 A;  2DFI A;  2ZSG A;  4S2R P;  5D6E A;  2NQ7 A;  1R5G A;  2OAZ A;  4U73 A;  3L24 A;  4HXX A;  2GU6 A;  1WL9 A;  1WLR A;  3IU7 A;  1KQ9 A;  2Q93 A;  4RZZ A;  1BN5 A;  2GU5 A;  4OOK A;  5CLS A;  2GG5 A;  1W2M A;  3OOO A;  3FMQ A;  3RVA A;  2BWU A;  3PKB A;  4FO8 A;  1QXY A;  3L7G A;  2BWX A;  4MAT A;  1M35 A;  3PKA A;  4PNC A;  4U70 A;  4IKR A;  2Q94 A;  2BHD A;  3MX6 A;  2G6P A;  3IG4 A;  2BWT A;  4IEC A;  4S00 A;  3BIP A;  2BWW A;  3MAT A;  4RZY A;  1YW8 A;  1JAW A;  3QOC A;  2GGC A;  1YVM A;  3ROR A;  3TAV A;  2V6C A;  3FM3 A;  2EVM A;  4ZWU A;  2GG7 A;  3CTZ A;  4U6E A;  2GZ5 A;  3CB6 A;  1XNZ A;  3CB5 A;  1R58 A;  1XGO A;  3I7M A;  1WBQ A;  4IKT A;  4JUQ A;  4ZNG A;  1QZY A;  2GG3 A;  5CDE A;  1R5H A;  4U6C A;  1YJ3 A;  2HOW A;  1C21 A;  1XGM A;  2NQ6 A;  1WN1 A;  2BWY A;  5JFR A;  3O5V A;  3PKD A;  2MAT A;  3IU8 A;  1BOA A;  1C23 A;  4KM3 A;  3PKE A;  5JI6 A;  1WL6 A;  2P99 A;  2V3Y A;  5CIK A;  4ZWP A;  4EGE A;  1B59 A;  5E2C A;  4IF7 A;  5CDL A;  2GG2 A;  5JHU A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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