4ZWUA

Crystal structure of organophosphate anhydrolase/prolidase mutant y212f, v342l, i215y
Total Genus 154
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
154
sequence length
439
structure length
435
Chain Sequence
NKLAVLYAEHIATLQKRTREIIERENLDGVVFHSGQAKRQFLDDMYYPFKVNPQFKAWLPVIDNPHCWIVANGTDKPKLIFYRPVDFWHKVEPNEYWADYFDIELLVKPDQVEKLLPYDKARFAYIGEYLEVAQALGFELMNPEPVMNFYHYHRAYKTQYELACMREANKIAVQGHKAARDAFFQGKSEFEIQQAYLLATQHSENDTPFGNYVALNENCAILHYTHFDRVAPATHRSFLIDAGANFNGYAADITRTYDFTGEGEFAELVATMKQHQIALCNQLAPGKLYGELHLDCHQRVAQTLSDFNIVNLSADEIVAKGITSTFFPHGLGHHIGLQLHDVGGFMADEQGAHQEPGHPFLRCTRKIEANQVFTIEPGLYFIDSLLGDLAATDNNQHINWDKVAELKPFGGIRIEDNIIVHEDSLENMTRELELD
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords ORGANOPHOSPHATE ANHYDROLASE/PROLIDASE
publication title Engineering the Organophosphorus Acid Anhydrolase Enzyme for Increased Catalytic Efficiency and Broadened Stereospecificity on Russian VX.
pubmed doi rcsb
source organism Alteromonas sp.
molecule tags Hydrolase
total genus 154
structure length 435
sequence length 439
chains with identical sequence B
ec nomenclature ec 3.1.8.1: Aryldialkylphosphatase.
pdb deposition date 2015-05-19

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 4zwuA01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 4zwuA02
1QXYA 3I7MA 3PKEA 2BHAA 4U6WA 4ZNGA 2B3HA 2BWVA 4QR8A 1M35A 2EVMA 2GG2A 2NQ7A 4S2RP 1KQ0A 2BWSA 2EVOA 4IKSA 1XGSA 5E2CA 5D6FA 5D6EA 1WL6A 4IDYA 3RORA 1R58A 4FO7A 4KM3A 4IKUA 1QZYA 1B6AA 1R5GA 4HXXA 2MATA 2GTXA 5FCHA 3PKCA 1PV9A 1R5HA 1JAWA 4ZWPA 1WY2A 4IU6A 1C24A 2GG7A 2BWYA 2ADUA 1KQ9A 3MX6A 1WBQA 1N51A 3FMQA 4R60A 1YW7A 4S01A 2BH3A 1QXZA 2Q8KA 3FM3A 4RGZ1 3CB6A 3L24A 2V6CA 4IKTA 4U69A 5FCFA 4JUQA 3BIQA 5CLSA 2GG9A 3RVAA 4RZYA 1WN1A 4U6EA 4U71A 3IU9A 5CE6A 1C21A 2BWTA 1QXWA 2Q92A 4U76A 3PKAA 2ZSGA 2NQ6A 3PN9A 2BHDA 2BWUA 3O5VA 4S2TP 2GG0A 4OOKA 3PKDA 1KP0A 2GU4A 2GGCA 4FLJA 1WKMA 4S00A 3IL0A 2BB7A 2P98A 1XGOA 4U70A 1C23A 1C22A 5JFRA 1WL9A 4FLKA 4ZWOA 3IU8A 2BWXA 2G6PA 2GU5A 3PEBA 4U6CA 4FKCA 1YVMA 2Q95A 2BHBA 2IW2A 1W2MA 3TB5A 2BN7A 3QOCA 3MATA 3S6BA 1B59A 4PV4A 3Q6DA 3D27A 1W7VA 2B3KA 4U73A 4IF7A 1YW9A 1BN5A 1MATA 2HOWA 4Z7MA 4MATA 5JHUA 4PNCA 2GG3A 1XNZA 2P99A 1C27A 5CDLA 3IU7A 1BOAA 3PKBA 3BITA 2P9AA 1Y1NA 2GU7A 2Q93A 3IG4A 1CHMA 4FUKA 1XGMA 5CDVA 3CTZA 4RZZA 3OVKA 2BHCA 4FO8A 3L7GA 2Q94A 2Q96A 1YW8A 3BIPA 1XGNA 5CDEA 4FLIA 2OAZA 2DFIA 4A6WA 2V3ZA 2B3LA 2EA4A 4U1BA 3OOOA 2EVCA 4IKRA 1WLRA 2BWWA 4B28A 2GG5A 2GGBA 4IPAA 1A16A 2EA2A 4IECA 3TAVA 4EGEA 4U75A 4A6VA 4U6ZA 3CB5A 2V3YA 1YJ3A 2GG8A 5E5BA 4FLLA 1O0XA 3FMRA 3MR1A 4ZWUA 2GA2A 2GU6A 2GZ5A 4U6JA 2V3XA 5CIKA 2OKNA 5CNXA 5JI6A
chains in the Genus database with same CATH superfamily
1QXYA 3I7MA 3PKEA 2BHAA 4U6WA 4ZNGA 2B3HA 2BWVA 4QR8A 1M35A 2EVMA 2GG2A 2NQ7A 4S2RP 1KQ0A 2BWSA 2EVOA 4IKSA 1XGSA 5E2CA 5D6FA 5D6EA 1WL6A 4IDYA 3RORA 1R58A 4FO7A 4KM3A 4IKUA 1QZYA 1B6AA 1R5GA 4HXXA 2MATA 2GTXA 5FCHA 3PKCA 1PV9A 1R5HA 1JAWA 4ZWPA 1WY2A 4IU6A 1C24A 2GG7A 2BWYA 2ADUA 1KQ9A 3MX6A 1WBQA 1N51A 3FMQA 4R60A 1YW7A 4S01A 2BH3A 1QXZA 2Q8KA 3FM3A 4RGZ1 3CB6A 3L24A 2V6CA 4IKTA 4U69A 5FCFA 4JUQA 3BIQA 5CLSA 2GG9A 3RVAA 4RZYA 1WN1A 4U6EA 4U71A 3IU9A 5CE6A 1C21A 2BWTA 1QXWA 2Q92A 4U76A 3PKAA 2ZSGA 2NQ6A 3PN9A 2BHDA 2BWUA 3O5VA 4S2TP 2GG0A 4OOKA 3PKDA 1KP0A 2GU4A 2GGCA 4FLJA 1WKMA 4S00A 3IL0A 2BB7A 2P98A 1XGOA 4U70A 1C23A 1C22A 5JFRA 1WL9A 4FLKA 4ZWOA 3IU8A 2BWXA 2G6PA 2GU5A 3PEBA 4U6CA 4FKCA 1YVMA 2Q95A 2BHBA 2IW2A 1W2MA 3TB5A 2BN7A 3QOCA 3MATA 3S6BA 1B59A 4PV4A 3Q6DA 3D27A 1W7VA 2B3KA 4U73A 4IF7A 1YW9A 1BN5A 1MATA 2HOWA 4Z7MA 4MATA 5JHUA 4PNCA 2GG3A 1XNZA 2P99A 1C27A 5CDLA 3IU7A 1BOAA 3PKBA 3BITA 2P9AA 1Y1NA 2GU7A 2Q93A 3IG4A 1CHMA 4FUKA 1XGMA 5CDVA 3CTZA 4RZZA 3OVKA 2BHCA 4FO8A 3L7GA 2Q94A 2Q96A 1YW8A 3BIPA 1XGNA 5CDEA 4FLIA 2OAZA 2DFIA 4A6WA 2V3ZA 2B3LA 2EA4A 4U1BA 3OOOA 2EVCA 4IKRA 1WLRA 2BWWA 4B28A 2GG5A 2GGBA 4IPAA 1A16A 2EA2A 4IECA 3TAVA 4EGEA 4U75A 4A6VA 4U6ZA 3CB5A 2V3YA 1YJ3A 2GG8A 5E5BA 4FLLA 1O0XA 3FMRA 3MR1A 4ZWUA 2GA2A 2GU6A 2GZ5A 4U6JA 2V3XA 5CIKA 2OKNA 5CNXA 5JI6A
chains in the Genus database with same CATH topology
1QXYA 3I7MA 3PKEA 2BHAA 4U6WA 4ZNGA 2B3HA 2BWVA 4QR8A 1M35A 2EVMA 2GG2A 2NQ7A 4S2RP 1KQ0A 2BWSA 2EVOA 4IKSA 1XGSA 5E2CA 5D6FA 5D6EA 1WL6A 4IDYA 3RORA 1R58A 4FO7A 4KM3A 4IKUA 1QZYA 1B6AA 1R5GA 4HXXA 2MATA 2GTXA 5FCHA 3PKCA 1PV9A 1R5HA 1JAWA 4ZWPA 1WY2A 4IU6A 1C24A 2GG7A 2BWYA 2ADUA 1KQ9A 3MX6A 1WBQA 1N51A 3FMQA 4R60A 1YW7A 4S01A 2BH3A 1QXZA 2Q8KA 3FM3A 4RGZ1 3CB6A 3L24A 2V6CA 4IKTA 4U69A 5FCFA 4JUQA 3BIQA 5CLSA 2GG9A 3RVAA 4RZYA 1WN1A 4U6EA 4U71A 3IU9A 5CE6A 1C21A 2BWTA 1QXWA 2Q92A 4U76A 3PKAA 2ZSGA 2NQ6A 3PN9A 2BHDA 2BWUA 3O5VA 4S2TP 2GG0A 4OOKA 3PKDA 1KP0A 2GU4A 2GGCA 4FLJA 1WKMA 4S00A 3IL0A 2BB7A 2P98A 1XGOA 4U70A 1C23A 1C22A 5JFRA 1WL9A 4FLKA 4ZWOA 3IU8A 2BWXA 2G6PA 2GU5A 3PEBA 4U6CA 4FKCA 1YVMA 2Q95A 2BHBA 2IW2A 1W2MA 3TB5A 2BN7A 3QOCA 3MATA 3S6BA 1B59A 4PV4A 3Q6DA 3D27A 1W7VA 2B3KA 4U73A 4IF7A 1YW9A 1BN5A 1MATA 2HOWA 4Z7MA 4MATA 5JHUA 4PNCA 2GG3A 1XNZA 2P99A 1C27A 5CDLA 3IU7A 1BOAA 3PKBA 3BITA 2P9AA 1Y1NA 2GU7A 2Q93A 3IG4A 1CHMA 4FUKA 1XGMA 5CDVA 3CTZA 4RZZA 3OVKA 2BHCA 4FO8A 3L7GA 2Q94A 2Q96A 1YW8A 3BIPA 1XGNA 5CDEA 4FLIA 2OAZA 2DFIA 4A6WA 2V3ZA 2B3LA 2EA4A 4U1BA 3OOOA 2EVCA 4IKRA 1WLRA 2BWWA 4B28A 2GG5A 2GGBA 4IPAA 1A16A 2EA2A 4IECA 3TAVA 4EGEA 4U75A 4A6VA 4U6ZA 3CB5A 2V3YA 1YJ3A 2GG8A 5E5BA 4FLLA 1O0XA 3FMRA 3MR1A 4ZWUA 2GA2A 2GU6A 2GZ5A 4U6JA 2V3XA 5CIKA 2OKNA 5CNXA 5JI6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QXY A;  3I7M A;  3PKE A;  2BHA A;  4U6W A;  4ZNG A;  2B3H A;  2BWV A;  4QR8 A;  1M35 A;  2EVM A;  2GG2 A;  2NQ7 A;  4S2R P;  1KQ0 A;  2BWS A;  2EVO A;  4IKS A;  1XGS A;  5E2C A;  5D6F A;  5D6E A;  1WL6 A;  4IDY A;  3ROR A;  1R58 A;  4FO7 A;  4KM3 A;  4IKU A;  1QZY A;  1B6A A;  1R5G A;  4HXX A;  2MAT A;  2GTX A;  5FCH A;  3PKC A;  1PV9 A;  1R5H A;  1JAW A;  4ZWP A;  1WY2 A;  4IU6 A;  1C24 A;  2GG7 A;  2BWY A;  2ADU A;  1KQ9 A;  3MX6 A;  1WBQ A;  1N51 A;  3FMQ A;  4R60 A;  1YW7 A;  4S01 A;  2BH3 A;  1QXZ A;  2Q8K A;  3FM3 A;  4RGZ 1;  3CB6 A;  3L24 A;  2V6C A;  4IKT A;  4U69 A;  5FCF A;  4JUQ A;  3BIQ A;  5CLS A;  2GG9 A;  3RVA A;  4RZY A;  1WN1 A;  4U6E A;  4U71 A;  3IU9 A;  5CE6 A;  1C21 A;  2BWT A;  1QXW A;  2Q92 A;  4U76 A;  3PKA A;  2ZSG A;  2NQ6 A;  3PN9 A;  2BHD A;  2BWU A;  3O5V A;  4S2T P;  2GG0 A;  4OOK A;  3PKD A;  1KP0 A;  2GU4 A;  2GGC A;  4FLJ A;  1WKM A;  4S00 A;  3IL0 A;  2BB7 A;  2P98 A;  1XGO A;  4U70 A;  1C23 A;  1C22 A;  5JFR A;  1WL9 A;  4FLK A;  4ZWO A;  3IU8 A;  2BWX A;  2G6P A;  2GU5 A;  3PEB A;  4U6C A;  4FKC A;  1YVM A;  2Q95 A;  2BHB A;  2IW2 A;  1W2M A;  3TB5 A;  2BN7 A;  3QOC A;  3MAT A;  3S6B A;  1B59 A;  4PV4 A;  3Q6D A;  3D27 A;  1W7V A;  2B3K A;  4U73 A;  4IF7 A;  1YW9 A;  1BN5 A;  1MAT A;  2HOW A;  4Z7M A;  4MAT A;  5JHU A;  4PNC A;  2GG3 A;  1XNZ A;  2P99 A;  1C27 A;  5CDL A;  3IU7 A;  1BOA A;  3PKB A;  3BIT A;  2P9A A;  1Y1N A;  2GU7 A;  2Q93 A;  3IG4 A;  1CHM A;  4FUK A;  1XGM A;  5CDV A;  3CTZ A;  4RZZ A;  3OVK A;  2BHC A;  4FO8 A;  3L7G A;  2Q94 A;  2Q96 A;  1YW8 A;  3BIP A;  1XGN A;  5CDE A;  4FLI A;  2OAZ A;  2DFI A;  4A6W A;  2V3Z A;  2B3L A;  2EA4 A;  4U1B A;  3OOO A;  2EVC A;  4IKR A;  1WLR A;  2BWW A;  4B28 A;  2GG5 A;  2GGB A;  4IPA A;  1A16 A;  2EA2 A;  4IEC A;  3TAV A;  4EGE A;  4U75 A;  4A6V A;  4U6Z A;  3CB5 A;  2V3Y A;  1YJ3 A;  2GG8 A;  5E5B A;  4FLL A;  1O0X A;  3FMR A;  3MR1 A;  4ZWU A;  2GA2 A;  2GU6 A;  2GZ5 A;  4U6J A;  2V3X A;  5CIK A;  2OKN A;  5CNX A;  5JI6 A; 
#chains in the Genus database with same CATH topology
 1QXY A;  3I7M A;  3PKE A;  2BHA A;  4U6W A;  4ZNG A;  2B3H A;  2BWV A;  4QR8 A;  1M35 A;  2EVM A;  2GG2 A;  2NQ7 A;  4S2R P;  1KQ0 A;  2BWS A;  2EVO A;  4IKS A;  1XGS A;  5E2C A;  5D6F A;  5D6E A;  1WL6 A;  4IDY A;  3ROR A;  1R58 A;  4FO7 A;  4KM3 A;  4IKU A;  1QZY A;  1B6A A;  1R5G A;  4HXX A;  2MAT A;  2GTX A;  5FCH A;  3PKC A;  1PV9 A;  1R5H A;  1JAW A;  4ZWP A;  1WY2 A;  4IU6 A;  1C24 A;  2GG7 A;  2BWY A;  2ADU A;  1KQ9 A;  3MX6 A;  1WBQ A;  1N51 A;  3FMQ A;  4R60 A;  1YW7 A;  4S01 A;  2BH3 A;  1QXZ A;  2Q8K A;  3FM3 A;  4RGZ 1;  3CB6 A;  3L24 A;  2V6C A;  4IKT A;  4U69 A;  5FCF A;  4JUQ A;  3BIQ A;  5CLS A;  2GG9 A;  3RVA A;  4RZY A;  1WN1 A;  4U6E A;  4U71 A;  3IU9 A;  5CE6 A;  1C21 A;  2BWT A;  1QXW A;  2Q92 A;  4U76 A;  3PKA A;  2ZSG A;  2NQ6 A;  3PN9 A;  2BHD A;  2BWU A;  3O5V A;  4S2T P;  2GG0 A;  4OOK A;  3PKD A;  1KP0 A;  2GU4 A;  2GGC A;  4FLJ A;  1WKM A;  4S00 A;  3IL0 A;  2BB7 A;  2P98 A;  1XGO A;  4U70 A;  1C23 A;  1C22 A;  5JFR A;  1WL9 A;  4FLK A;  4ZWO A;  3IU8 A;  2BWX A;  2G6P A;  2GU5 A;  3PEB A;  4U6C A;  4FKC A;  1YVM A;  2Q95 A;  2BHB A;  2IW2 A;  1W2M A;  3TB5 A;  2BN7 A;  3QOC A;  3MAT A;  3S6B A;  1B59 A;  4PV4 A;  3Q6D A;  3D27 A;  1W7V A;  2B3K A;  4U73 A;  4IF7 A;  1YW9 A;  1BN5 A;  1MAT A;  2HOW A;  4Z7M A;  4MAT A;  5JHU A;  4PNC A;  2GG3 A;  1XNZ A;  2P99 A;  1C27 A;  5CDL A;  3IU7 A;  1BOA A;  3PKB A;  3BIT A;  2P9A A;  1Y1N A;  2GU7 A;  2Q93 A;  3IG4 A;  1CHM A;  4FUK A;  1XGM A;  5CDV A;  3CTZ A;  4RZZ A;  3OVK A;  2BHC A;  4FO8 A;  3L7G A;  2Q94 A;  2Q96 A;  1YW8 A;  3BIP A;  1XGN A;  5CDE A;  4FLI A;  2OAZ A;  2DFI A;  4A6W A;  2V3Z A;  2B3L A;  2EA4 A;  4U1B A;  3OOO A;  2EVC A;  4IKR A;  1WLR A;  2BWW A;  4B28 A;  2GG5 A;  2GGB A;  4IPA A;  1A16 A;  2EA2 A;  4IEC A;  3TAV A;  4EGE A;  4U75 A;  4A6V A;  4U6Z A;  3CB5 A;  2V3Y A;  1YJ3 A;  2GG8 A;  5E5B A;  4FLL A;  1O0X A;  3FMR A;  3MR1 A;  4ZWU A;  2GA2 A;  2GU6 A;  2GZ5 A;  4U6J A;  2V3X A;  5CIK A;  2OKN A;  5CNX A;  5JI6 A; 
#chains in the Genus database with same CATH homology
 1QXY A;  3I7M A;  3PKE A;  2BHA A;  4U6W A;  4ZNG A;  2B3H A;  2BWV A;  4QR8 A;  1M35 A;  2EVM A;  2GG2 A;  2NQ7 A;  4S2R P;  1KQ0 A;  2BWS A;  2EVO A;  4IKS A;  1XGS A;  5E2C A;  5D6F A;  5D6E A;  1WL6 A;  4IDY A;  3ROR A;  1R58 A;  4FO7 A;  4KM3 A;  4IKU A;  1QZY A;  1B6A A;  1R5G A;  4HXX A;  2MAT A;  2GTX A;  5FCH A;  3PKC A;  1PV9 A;  1R5H A;  1JAW A;  4ZWP A;  1WY2 A;  4IU6 A;  1C24 A;  2GG7 A;  2BWY A;  2ADU A;  1KQ9 A;  3MX6 A;  1WBQ A;  1N51 A;  3FMQ A;  4R60 A;  1YW7 A;  4S01 A;  2BH3 A;  1QXZ A;  2Q8K A;  3FM3 A;  4RGZ 1;  3CB6 A;  3L24 A;  2V6C A;  4IKT A;  4U69 A;  5FCF A;  4JUQ A;  3BIQ A;  5CLS A;  2GG9 A;  3RVA A;  4RZY A;  1WN1 A;  4U6E A;  4U71 A;  3IU9 A;  5CE6 A;  1C21 A;  2BWT A;  1QXW A;  2Q92 A;  4U76 A;  3PKA A;  2ZSG A;  2NQ6 A;  3PN9 A;  2BHD A;  2BWU A;  3O5V A;  4S2T P;  2GG0 A;  4OOK A;  3PKD A;  1KP0 A;  2GU4 A;  2GGC A;  4FLJ A;  1WKM A;  4S00 A;  3IL0 A;  2BB7 A;  2P98 A;  1XGO A;  4U70 A;  1C23 A;  1C22 A;  5JFR A;  1WL9 A;  4FLK A;  4ZWO A;  3IU8 A;  2BWX A;  2G6P A;  2GU5 A;  3PEB A;  4U6C A;  4FKC A;  1YVM A;  2Q95 A;  2BHB A;  2IW2 A;  1W2M A;  3TB5 A;  2BN7 A;  3QOC A;  3MAT A;  3S6B A;  1B59 A;  4PV4 A;  3Q6D A;  3D27 A;  1W7V A;  2B3K A;  4U73 A;  4IF7 A;  1YW9 A;  1BN5 A;  1MAT A;  2HOW A;  4Z7M A;  4MAT A;  5JHU A;  4PNC A;  2GG3 A;  1XNZ A;  2P99 A;  1C27 A;  5CDL A;  3IU7 A;  1BOA A;  3PKB A;  3BIT A;  2P9A A;  1Y1N A;  2GU7 A;  2Q93 A;  3IG4 A;  1CHM A;  4FUK A;  1XGM A;  5CDV A;  3CTZ A;  4RZZ A;  3OVK A;  2BHC A;  4FO8 A;  3L7G A;  2Q94 A;  2Q96 A;  1YW8 A;  3BIP A;  1XGN A;  5CDE A;  4FLI A;  2OAZ A;  2DFI A;  4A6W A;  2V3Z A;  2B3L A;  2EA4 A;  4U1B A;  3OOO A;  2EVC A;  4IKR A;  1WLR A;  2BWW A;  4B28 A;  2GG5 A;  2GGB A;  4IPA A;  1A16 A;  2EA2 A;  4IEC A;  3TAV A;  4EGE A;  4U75 A;  4A6V A;  4U6Z A;  3CB5 A;  2V3Y A;  1YJ3 A;  2GG8 A;  5E5B A;  4FLL A;  1O0X A;  3FMR A;  3MR1 A;  4ZWU A;  2GA2 A;  2GU6 A;  2GZ5 A;  4U6J A;  2V3X A;  5CIK A;  2OKN A;  5CNX A;  5JI6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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