2BH3A

Zn substituted e. coli aminopeptidase p in complex with product
Total Genus 161
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
161
sequence length
440
structure length
440
Chain Sequence
SEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPYRQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEKLGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADVIVNSALEKLRKGSRQNLTAPATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHHEFNRHGARYPSYNTIVGSGENGCILHYTENECEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKGDVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPDAEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMVAARKQ
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Hydrolase
source organism Escherichia coli
publication title Structural and Functional Implications of Metal Ion Selection in Aminopeptidase P, a Metalloprotease with a Dinuclear Metal Center.
pubmed doi rcsb
molecule keywords XAA-PRO AMINOPEPTIDASE
total genus 161
structure length 440
sequence length 440
ec nomenclature ec 3.4.11.9: Xaa-Pro aminopeptidase.
pdb deposition date 2005-01-07

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00557 Peptidase_M24 Metallopeptidase family M24
A PF05195 AMP_N Aminopeptidase P, N-terminal domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.350.10 Alpha Beta 3-Layer(aba) Sandwich Creatine Amidinohydrolase; Chain A, domain 1 Creatinase/prolidase N-terminal domain 2bh3A01
3.90.230.10 Alpha Beta Alpha-Beta Complex Creatine Amidinohydrolase Creatinase/methionine aminopeptidase superfamily 2bh3A02
4EGEA 4FLIA 1B6AA 4FO8A 2B3KA 5JI6A 2B3HA 2GA2A 3S6BA 2BWWA 4IKSA 2GG3A 4OOKA 1M35A 1QXZA 3IU7A 1XGNA 2GG5A 2GG9A 1WY2A 3QOCA 2V3XA 1C21A 4S00A 1C22A 2B3LA 3CB5A 5CNXA 4U70A 3L24A 2Q93A 5JFRA 3IU8A 5CIKA 1R5GA 3BIPA 4S2RP 3PKAA 1CHMA 2MATA 3TAVA 2BHAA 4RZZA 1R58A 1YW9A 2GG7A 4A6VA 4FKCA 1BN5A 4A6WA 2V3ZA 3TB5A 1KP0A 4IKTA 5E5BA 4HXXA 2BN7A 3MR1A 3BITA 2GTXA 1WL6A 2BHDA 2V3YA 4IECA 2BWSA 2BHCA 1C27A 2GU6A 2ZSGA 1O0XA 4ZWPA 1KQ0A 3RORA 1WL9A 1R5HA 3L7GA 1N51A 1XNZA 3PEBA 3RVAA 3IU9A 5D6FA 3PKCA 2GGBA 4U6EA 1XGMA 2P98A 4U6WA 4U71A 2P99A 4ZNGA 2Q95A 4U1BA 3I7MA 1XGSA 2G6PA 4U75A 2GU7A 1QXWA 1WBQA 2Q92A 4IKUA 2GG8A 4U6CA 2DFIA 4QR8A 1QXYA 2IW2A 4PV4A 4ZWUA 4PNCA 5D6EA 4FLJA 3PKDA 4U69A 2GG2A 3PKBA 3OOOA 4ZWOA 3IL0A 1W7VA 1Y1NA 1WN1A 2GZ5A 3D27A 1C23A 2EA2A 1B59A 4R60A 1BOAA 4IKRA 2EVCA 5CLSA 1KQ9A 5JHUA 4B28A 1A16A 2NQ6A 3MX6A 4U73A 4S01A 1YW7A 3O5VA 4IPAA 1MATA 3FMQA 2EVOA 1YJ3A 4KM3A 3PKEA 1WLRA 2OAZA 4Z7MA 5CDEA 3CB6A 2Q96A 2BHBA 4IF7A 2BWXA 1WKMA 4IDYA 4U76A 4IU6A 2Q8KA 3OVKA 2BWVA 4RGZ1 3Q6DA 1QZYA 2GG0A 5FCHA 2EA4A 2OKNA 4MATA 3MATA 1JAWA 2V6CA 2Q94A 4FO7A 2GGCA 4JUQA 3FM3A 5CDVA 4U6JA 1XGOA 5E2CA 2ADUA 2GU5A 2HOWA 4RZYA 1YW8A 5CDLA 2EVMA 1C24A 3BIQA 5CE6A 1PV9A 2BWYA 5FCFA 4U6ZA 3PN9A 2P9AA 4FLLA 4S2TP 2GU4A 4FUKA 1W2MA 2BH3A 2BWUA 3FMRA 3IG4A 2BWTA 3CTZA 2NQ7A 4FLKA 2BB7A 1YVMA
chains in the Genus database with same CATH superfamily
4EGEA 4FLIA 1B6AA 4FO8A 2B3KA 5JI6A 2B3HA 2GA2A 3S6BA 2BWWA 4IKSA 2GG3A 4OOKA 1M35A 1QXZA 3IU7A 1XGNA 2GG5A 2GG9A 1WY2A 3QOCA 2V3XA 1C21A 4S00A 1C22A 2B3LA 3CB5A 5CNXA 4U70A 3L24A 2Q93A 5JFRA 3IU8A 5CIKA 1R5GA 3BIPA 4S2RP 3PKAA 1CHMA 2MATA 3TAVA 2BHAA 4RZZA 1R58A 1YW9A 2GG7A 4A6VA 4FKCA 1BN5A 4A6WA 2V3ZA 3TB5A 1KP0A 4IKTA 5E5BA 4HXXA 2BN7A 3MR1A 3BITA 2GTXA 1WL6A 2BHDA 2V3YA 4IECA 2BWSA 2BHCA 1C27A 2GU6A 2ZSGA 1O0XA 4ZWPA 1KQ0A 3RORA 1WL9A 1R5HA 3L7GA 1N51A 1XNZA 3PEBA 3RVAA 3IU9A 5D6FA 3PKCA 2GGBA 4U6EA 1XGMA 2P98A 4U6WA 4U71A 2P99A 4ZNGA 2Q95A 4U1BA 3I7MA 1XGSA 2G6PA 4U75A 2GU7A 1QXWA 1WBQA 2Q92A 4IKUA 2GG8A 4U6CA 2DFIA 4QR8A 1QXYA 2IW2A 4PV4A 4ZWUA 4PNCA 5D6EA 4FLJA 3PKDA 4U69A 2GG2A 3PKBA 3OOOA 4ZWOA 3IL0A 1W7VA 1Y1NA 1WN1A 2GZ5A 3D27A 1C23A 2EA2A 1B59A 4R60A 1BOAA 4IKRA 2EVCA 5CLSA 1KQ9A 5JHUA 4B28A 1A16A 2NQ6A 3MX6A 4U73A 4S01A 1YW7A 3O5VA 4IPAA 1MATA 3FMQA 2EVOA 1YJ3A 4KM3A 3PKEA 1WLRA 2OAZA 4Z7MA 5CDEA 3CB6A 2Q96A 2BHBA 4IF7A 2BWXA 1WKMA 4IDYA 4U76A 4IU6A 2Q8KA 3OVKA 2BWVA 4RGZ1 3Q6DA 1QZYA 2GG0A 5FCHA 2EA4A 2OKNA 4MATA 3MATA 1JAWA 2V6CA 2Q94A 4FO7A 2GGCA 4JUQA 3FM3A 5CDVA 4U6JA 1XGOA 5E2CA 2ADUA 2GU5A 2HOWA 4RZYA 1YW8A 5CDLA 2EVMA 1C24A 3BIQA 5CE6A 1PV9A 2BWYA 5FCFA 4U6ZA 3PN9A 2P9AA 4FLLA 4S2TP 2GU4A 4FUKA 1W2MA 2BH3A 2BWUA 3FMRA 3IG4A 2BWTA 3CTZA 2NQ7A 4FLKA 2BB7A 1YVMA
chains in the Genus database with same CATH topology
4EGEA 4FLIA 1B6AA 4FO8A 2B3KA 5JI6A 2B3HA 2GA2A 3S6BA 2BWWA 4IKSA 2GG3A 4OOKA 1M35A 1QXZA 3IU7A 1XGNA 2GG5A 2GG9A 1WY2A 3QOCA 2V3XA 1C21A 4S00A 1C22A 2B3LA 3CB5A 5CNXA 4U70A 3L24A 2Q93A 5JFRA 3IU8A 5CIKA 1R5GA 3BIPA 4S2RP 3PKAA 1CHMA 2MATA 3TAVA 2BHAA 4RZZA 1R58A 1YW9A 2GG7A 4A6VA 4FKCA 1BN5A 4A6WA 2V3ZA 3TB5A 1KP0A 4IKTA 5E5BA 4HXXA 2BN7A 3MR1A 3BITA 2GTXA 1WL6A 2BHDA 2V3YA 4IECA 2BWSA 2BHCA 1C27A 2GU6A 2ZSGA 1O0XA 4ZWPA 1KQ0A 3RORA 1WL9A 1R5HA 3L7GA 1N51A 1XNZA 3PEBA 3RVAA 3IU9A 5D6FA 3PKCA 2GGBA 4U6EA 1XGMA 2P98A 4U6WA 4U71A 2P99A 4ZNGA 2Q95A 4U1BA 3I7MA 1XGSA 2G6PA 4U75A 2GU7A 1QXWA 1WBQA 2Q92A 4IKUA 2GG8A 4U6CA 2DFIA 4QR8A 1QXYA 2IW2A 4PV4A 4ZWUA 4PNCA 5D6EA 4FLJA 3PKDA 4U69A 2GG2A 3PKBA 3OOOA 4ZWOA 3IL0A 1W7VA 1Y1NA 1WN1A 2GZ5A 3D27A 1C23A 2EA2A 1B59A 4R60A 1BOAA 4IKRA 2EVCA 5CLSA 1KQ9A 5JHUA 4B28A 1A16A 2NQ6A 3MX6A 4U73A 4S01A 1YW7A 3O5VA 4IPAA 1MATA 3FMQA 2EVOA 1YJ3A 4KM3A 3PKEA 1WLRA 2OAZA 4Z7MA 5CDEA 3CB6A 2Q96A 2BHBA 4IF7A 2BWXA 1WKMA 4IDYA 4U76A 4IU6A 2Q8KA 3OVKA 2BWVA 4RGZ1 3Q6DA 1QZYA 2GG0A 5FCHA 2EA4A 2OKNA 4MATA 3MATA 1JAWA 2V6CA 2Q94A 4FO7A 2GGCA 4JUQA 3FM3A 5CDVA 4U6JA 1XGOA 5E2CA 2ADUA 2GU5A 2HOWA 4RZYA 1YW8A 5CDLA 2EVMA 1C24A 3BIQA 5CE6A 1PV9A 2BWYA 5FCFA 4U6ZA 3PN9A 2P9AA 4FLLA 4S2TP 2GU4A 4FUKA 1W2MA 2BH3A 2BWUA 3FMRA 3IG4A 2BWTA 3CTZA 2NQ7A 4FLKA 2BB7A 1YVMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4EGE A;  4FLI A;  1B6A A;  4FO8 A;  2B3K A;  5JI6 A;  2B3H A;  2GA2 A;  3S6B A;  2BWW A;  4IKS A;  2GG3 A;  4OOK A;  1M35 A;  1QXZ A;  3IU7 A;  1XGN A;  2GG5 A;  2GG9 A;  1WY2 A;  3QOC A;  2V3X A;  1C21 A;  4S00 A;  1C22 A;  2B3L A;  3CB5 A;  5CNX A;  4U70 A;  3L24 A;  2Q93 A;  5JFR A;  3IU8 A;  5CIK A;  1R5G A;  3BIP A;  4S2R P;  3PKA A;  1CHM A;  2MAT A;  3TAV A;  2BHA A;  4RZZ A;  1R58 A;  1YW9 A;  2GG7 A;  4A6V A;  4FKC A;  1BN5 A;  4A6W A;  2V3Z A;  3TB5 A;  1KP0 A;  4IKT A;  5E5B A;  4HXX A;  2BN7 A;  3MR1 A;  3BIT A;  2GTX A;  1WL6 A;  2BHD A;  2V3Y A;  4IEC A;  2BWS A;  2BHC A;  1C27 A;  2GU6 A;  2ZSG A;  1O0X A;  4ZWP A;  1KQ0 A;  3ROR A;  1WL9 A;  1R5H A;  3L7G A;  1N51 A;  1XNZ A;  3PEB A;  3RVA A;  3IU9 A;  5D6F A;  3PKC A;  2GGB A;  4U6E A;  1XGM A;  2P98 A;  4U6W A;  4U71 A;  2P99 A;  4ZNG A;  2Q95 A;  4U1B A;  3I7M A;  1XGS A;  2G6P A;  4U75 A;  2GU7 A;  1QXW A;  1WBQ A;  2Q92 A;  4IKU A;  2GG8 A;  4U6C A;  2DFI A;  4QR8 A;  1QXY A;  2IW2 A;  4PV4 A;  4ZWU A;  4PNC A;  5D6E A;  4FLJ A;  3PKD A;  4U69 A;  2GG2 A;  3PKB A;  3OOO A;  4ZWO A;  3IL0 A;  1W7V A;  1Y1N A;  1WN1 A;  2GZ5 A;  3D27 A;  1C23 A;  2EA2 A;  1B59 A;  4R60 A;  1BOA A;  4IKR A;  2EVC A;  5CLS A;  1KQ9 A;  5JHU A;  4B28 A;  1A16 A;  2NQ6 A;  3MX6 A;  4U73 A;  4S01 A;  1YW7 A;  3O5V A;  4IPA A;  1MAT A;  3FMQ A;  2EVO A;  1YJ3 A;  4KM3 A;  3PKE A;  1WLR A;  2OAZ A;  4Z7M A;  5CDE A;  3CB6 A;  2Q96 A;  2BHB A;  4IF7 A;  2BWX A;  1WKM A;  4IDY A;  4U76 A;  4IU6 A;  2Q8K A;  3OVK A;  2BWV A;  4RGZ 1;  3Q6D A;  1QZY A;  2GG0 A;  5FCH A;  2EA4 A;  2OKN A;  4MAT A;  3MAT A;  1JAW A;  2V6C A;  2Q94 A;  4FO7 A;  2GGC A;  4JUQ A;  3FM3 A;  5CDV A;  4U6J A;  1XGO A;  5E2C A;  2ADU A;  2GU5 A;  2HOW A;  4RZY A;  1YW8 A;  5CDL A;  2EVM A;  1C24 A;  3BIQ A;  5CE6 A;  1PV9 A;  2BWY A;  5FCF A;  4U6Z A;  3PN9 A;  2P9A A;  4FLL A;  4S2T P;  2GU4 A;  4FUK A;  1W2M A;  2BH3 A;  2BWU A;  3FMR A;  3IG4 A;  2BWT A;  3CTZ A;  2NQ7 A;  4FLK A;  2BB7 A;  1YVM A; 
#chains in the Genus database with same CATH topology
 4EGE A;  4FLI A;  1B6A A;  4FO8 A;  2B3K A;  5JI6 A;  2B3H A;  2GA2 A;  3S6B A;  2BWW A;  4IKS A;  2GG3 A;  4OOK A;  1M35 A;  1QXZ A;  3IU7 A;  1XGN A;  2GG5 A;  2GG9 A;  1WY2 A;  3QOC A;  2V3X A;  1C21 A;  4S00 A;  1C22 A;  2B3L A;  3CB5 A;  5CNX A;  4U70 A;  3L24 A;  2Q93 A;  5JFR A;  3IU8 A;  5CIK A;  1R5G A;  3BIP A;  4S2R P;  3PKA A;  1CHM A;  2MAT A;  3TAV A;  2BHA A;  4RZZ A;  1R58 A;  1YW9 A;  2GG7 A;  4A6V A;  4FKC A;  1BN5 A;  4A6W A;  2V3Z A;  3TB5 A;  1KP0 A;  4IKT A;  5E5B A;  4HXX A;  2BN7 A;  3MR1 A;  3BIT A;  2GTX A;  1WL6 A;  2BHD A;  2V3Y A;  4IEC A;  2BWS A;  2BHC A;  1C27 A;  2GU6 A;  2ZSG A;  1O0X A;  4ZWP A;  1KQ0 A;  3ROR A;  1WL9 A;  1R5H A;  3L7G A;  1N51 A;  1XNZ A;  3PEB A;  3RVA A;  3IU9 A;  5D6F A;  3PKC A;  2GGB A;  4U6E A;  1XGM A;  2P98 A;  4U6W A;  4U71 A;  2P99 A;  4ZNG A;  2Q95 A;  4U1B A;  3I7M A;  1XGS A;  2G6P A;  4U75 A;  2GU7 A;  1QXW A;  1WBQ A;  2Q92 A;  4IKU A;  2GG8 A;  4U6C A;  2DFI A;  4QR8 A;  1QXY A;  2IW2 A;  4PV4 A;  4ZWU A;  4PNC A;  5D6E A;  4FLJ A;  3PKD A;  4U69 A;  2GG2 A;  3PKB A;  3OOO A;  4ZWO A;  3IL0 A;  1W7V A;  1Y1N A;  1WN1 A;  2GZ5 A;  3D27 A;  1C23 A;  2EA2 A;  1B59 A;  4R60 A;  1BOA A;  4IKR A;  2EVC A;  5CLS A;  1KQ9 A;  5JHU A;  4B28 A;  1A16 A;  2NQ6 A;  3MX6 A;  4U73 A;  4S01 A;  1YW7 A;  3O5V A;  4IPA A;  1MAT A;  3FMQ A;  2EVO A;  1YJ3 A;  4KM3 A;  3PKE A;  1WLR A;  2OAZ A;  4Z7M A;  5CDE A;  3CB6 A;  2Q96 A;  2BHB A;  4IF7 A;  2BWX A;  1WKM A;  4IDY A;  4U76 A;  4IU6 A;  2Q8K A;  3OVK A;  2BWV A;  4RGZ 1;  3Q6D A;  1QZY A;  2GG0 A;  5FCH A;  2EA4 A;  2OKN A;  4MAT A;  3MAT A;  1JAW A;  2V6C A;  2Q94 A;  4FO7 A;  2GGC A;  4JUQ A;  3FM3 A;  5CDV A;  4U6J A;  1XGO A;  5E2C A;  2ADU A;  2GU5 A;  2HOW A;  4RZY A;  1YW8 A;  5CDL A;  2EVM A;  1C24 A;  3BIQ A;  5CE6 A;  1PV9 A;  2BWY A;  5FCF A;  4U6Z A;  3PN9 A;  2P9A A;  4FLL A;  4S2T P;  2GU4 A;  4FUK A;  1W2M A;  2BH3 A;  2BWU A;  3FMR A;  3IG4 A;  2BWT A;  3CTZ A;  2NQ7 A;  4FLK A;  2BB7 A;  1YVM A; 
#chains in the Genus database with same CATH homology
 4EGE A;  4FLI A;  1B6A A;  4FO8 A;  2B3K A;  5JI6 A;  2B3H A;  2GA2 A;  3S6B A;  2BWW A;  4IKS A;  2GG3 A;  4OOK A;  1M35 A;  1QXZ A;  3IU7 A;  1XGN A;  2GG5 A;  2GG9 A;  1WY2 A;  3QOC A;  2V3X A;  1C21 A;  4S00 A;  1C22 A;  2B3L A;  3CB5 A;  5CNX A;  4U70 A;  3L24 A;  2Q93 A;  5JFR A;  3IU8 A;  5CIK A;  1R5G A;  3BIP A;  4S2R P;  3PKA A;  1CHM A;  2MAT A;  3TAV A;  2BHA A;  4RZZ A;  1R58 A;  1YW9 A;  2GG7 A;  4A6V A;  4FKC A;  1BN5 A;  4A6W A;  2V3Z A;  3TB5 A;  1KP0 A;  4IKT A;  5E5B A;  4HXX A;  2BN7 A;  3MR1 A;  3BIT A;  2GTX A;  1WL6 A;  2BHD A;  2V3Y A;  4IEC A;  2BWS A;  2BHC A;  1C27 A;  2GU6 A;  2ZSG A;  1O0X A;  4ZWP A;  1KQ0 A;  3ROR A;  1WL9 A;  1R5H A;  3L7G A;  1N51 A;  1XNZ A;  3PEB A;  3RVA A;  3IU9 A;  5D6F A;  3PKC A;  2GGB A;  4U6E A;  1XGM A;  2P98 A;  4U6W A;  4U71 A;  2P99 A;  4ZNG A;  2Q95 A;  4U1B A;  3I7M A;  1XGS A;  2G6P A;  4U75 A;  2GU7 A;  1QXW A;  1WBQ A;  2Q92 A;  4IKU A;  2GG8 A;  4U6C A;  2DFI A;  4QR8 A;  1QXY A;  2IW2 A;  4PV4 A;  4ZWU A;  4PNC A;  5D6E A;  4FLJ A;  3PKD A;  4U69 A;  2GG2 A;  3PKB A;  3OOO A;  4ZWO A;  3IL0 A;  1W7V A;  1Y1N A;  1WN1 A;  2GZ5 A;  3D27 A;  1C23 A;  2EA2 A;  1B59 A;  4R60 A;  1BOA A;  4IKR A;  2EVC A;  5CLS A;  1KQ9 A;  5JHU A;  4B28 A;  1A16 A;  2NQ6 A;  3MX6 A;  4U73 A;  4S01 A;  1YW7 A;  3O5V A;  4IPA A;  1MAT A;  3FMQ A;  2EVO A;  1YJ3 A;  4KM3 A;  3PKE A;  1WLR A;  2OAZ A;  4Z7M A;  5CDE A;  3CB6 A;  2Q96 A;  2BHB A;  4IF7 A;  2BWX A;  1WKM A;  4IDY A;  4U76 A;  4IU6 A;  2Q8K A;  3OVK A;  2BWV A;  4RGZ 1;  3Q6D A;  1QZY A;  2GG0 A;  5FCH A;  2EA4 A;  2OKN A;  4MAT A;  3MAT A;  1JAW A;  2V6C A;  2Q94 A;  4FO7 A;  2GGC A;  4JUQ A;  3FM3 A;  5CDV A;  4U6J A;  1XGO A;  5E2C A;  2ADU A;  2GU5 A;  2HOW A;  4RZY A;  1YW8 A;  5CDL A;  2EVM A;  1C24 A;  3BIQ A;  5CE6 A;  1PV9 A;  2BWY A;  5FCF A;  4U6Z A;  3PN9 A;  2P9A A;  4FLL A;  4S2T P;  2GU4 A;  4FUK A;  1W2M A;  2BH3 A;  2BWU A;  3FMR A;  3IG4 A;  2BWT A;  3CTZ A;  2NQ7 A;  4FLK A;  2BB7 A;  1YVM A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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