3TY1A

Crystal structure of a putative aldose 1-epimerase (kpn_04629) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.90 a resolution
Total Genus 108
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
108
sequence length
384
structure length
384
Chain Sequence
GAKTWVLTNAEEGIDKGNWQINSDQLKVKDHAFSIEQKVLHGGKQEGSKILTIHSKDGLTITLSPTRGMNLLRIEGFGSRMGWDSPVKEVVNPAFINLESRNGLGWLEGFNEMMVRCGYEWTGHPVTADGQIYTLHGKAGNTPASLVEVEVADSAPYEIRIRGLVKESTFKKADLQTLTELRYVPGSNSFSLHDVLTNHADYPHDYQIIYHSNFGTPILEEGARFLAPISSISPFNDYAKSGLKTWQTYQGPTKDFDEMVFNIQPLADENHQTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDTVKQGYVTGIEPGTSYAYPVTIERKQKRVKQLQPGASAQFDLTYTLLHDSAQVAAVEQKIAKIQGDNKVAENETPIAKE
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
Updating...
connected with : NaN
molecule tags Isomerase
source organism Klebsiella pneumoniae subsp. pneumoniae mgh 78578
publication title Crystal structure of a Hypothetical aldose 1-epimerase (KPN_04629) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.90 A resolution
rcsb
molecule keywords Hypothetical aldose 1-epimerase
total genus 108
structure length 384
sequence length 384
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2011-09-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF14486 DUF4432 Domain of unknown function (DUF4432)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.98.80 Mainly Beta Distorted Sandwich Beta-galactosidase; Chain A, domain 5 Beta-galactosidase; Chain A, domain 5 3ty1A00
3TY1A
chains in the Genus database with same CATH superfamily
1V7VA 1O7DD 2OQEC 1W2ZA 3DDFA 1D6YA 3E7JA 4J5TA 1KSIA 4KFEA 1RKYA 1NKGA 1W6CA 3DX2A 3IAQA 2C11A 1NSVA 2F7OA 1NS8A 3MWXA 1N7PA 2FUQA 2OOVC 1TQVA 1CB8A 2WGQA 1YQ2A 2OQEA 1F1SA 3TY1A 1HWWA 5A1AA 2CQSA 1W5ZA 3E80A 3D50A 3AFJA 3AFLA 1R33A 1V7XA 2F18A 3A0OA 2BRVX 3WVFA 3MPHA 3RSYA 2E2VA 2W0QA 3VDCA 3VD9A 3VDBA 1N7QA 1L7KA 1QWNA 2CWTA 1RWFA 2WVXA 3DECA 4MMHA 2RDYA 3X3ZA 3LOYA 4FNQA 4K35A 3T0BA 1X1IA 1JOVA 1IU7A 1WMPA 2BRPA 4NEIA 2FYVA 2XN1A 1HMUA 3ACTA 4FNTA 1TU5A 3W7TA 1F4AA 1F4HA 2WYHA 4BTXA 1RWHA 3BLCA 2HTAA 3D4ZA 1JZ7A 3VDAA 5CA3A 1HN0A 2F7QA 3S4CA 1I8QA 1MMYA 2E2TA 3I3EA 1JZ6A 3VD7A 1HN1A 3DCDA 3BVWA 2WW0A 4BZFA 2XHNA 3KN4A 2X03A 2Y74A 2Q1FA 3BS6A 2JKEA 3OB8A 4K3AA 4FNUA 2WW1A 1JRQA 2F1BA 1OJMA 1K1WA 3IAPA 1MN0A 3QFYA 2WOFA 1WMNA 1LOHA 3NBBA 3BUBA 1US1A 1Z45A 3N9HA 1N9EA 3ALAA 4BZEA 1K1XA 1HXKA 3AMOB 1N7NA 2CISA 1HTYA 3A24A 1SIIA 1UI8A 1R34A 4KTRA 3DX1A 3BVUA 3T2PA 3WFAA 1TQUA 4DUWA 4KTPA 1OJOA 1MMUA 2Y73A 3OS7A 3BGAA 2E2UA 3DX4A 1JZ2A 2EABA 1WMOA 1MMXA 3PGBA 1X1JA 1YGAA 1UI7A 1IVVA 5JMFA 4BTYA 1AVLA 2OOVA 4OK4A 3BVTA 3W7UA 3VSNA 1OJNA 1EKMA 3D52A 3DX0A 1V7WA 4BZHA 1NSUA 2WDAA 3DYOA 2CFDA 2PNCA 3J7HA 1LF6A 1SNZA 1L7JA 2ZL8A 1D6UA 3SEPA 1SO0A 3BUDA 1LXKA 2CWUA 4FNPA 3BVVA 1QAKA 1JYWA 1QALA 3E1F1 3T0AA 2CFWA 3MV11 3Q1NA 1F9GA 3X3YA 3SXXA 2WW3A 3VSMA 1PU4A 1RJOA 3VD5A 1JYNA 3EJPA 2CIRA 1JZ5A 1JZ3A 3ECQA 1NS0A 5GW7A 3RRSA 2F7RA 3T0DA 2CIQA 3MV01 2WVXB 3EJUA 1NSMA 3NJVA 2EACA 2CG0A 2CWVA 1HM2A 2YX9A 3ACSA 3X42A 3I3BA 1NSXA 3S4DA 3NBJA 2EADA 3K5TA 1IQXA 2JKPA 3W7XA 5KBPA 3AMOA 1OACA 2F7PA 2WW2A 3DYPA 1PX4A 3IMHA 1TXKA 2ALWA 4DUVA 4FNSA 2XN0A 1SIHA 1SPUA 1J0NA 2WOHA 2YFOA 3EJQA 1H54A 3I3DA 4UFCA 3X3XA 4TTGA 1EGUA 1NSSA 1QWUA 3EJRA 3WA2X 1NSZA 2ZXQA 2BT3A 1NS2A 3DX3A 3BUQA 1LF9A 3T2QA 3S4AA 1TQWA 3T2OA 2FUTA 3BUIA 3X41A 3QG0A 1JZ8A 1RWAA 1N7OA 2XN2A 1MMZA 2WVZA 2D73A 3BVXA 1IQYA 2WZSA 2YFNA 1D6ZA 1N7RA 1TQSA 3HI7A 3DDGA 3QFZA 2WO0A 3MUZ1 2BRWA 4BZGA 3CZNA 2CQTA 3VD4A 1TQTA 3MI6A 3D51A 3T09A 3CV5A 1JZ4A 4DUXA 3SX1A 4FNVA 1IVXA 3CZJA 3X40A 3WIQA 1W4NA 5JMDA 2C10A 1C82A 1JYXA 3WA3A 1IVUA 1QAFA 4EV5A 1AVKA 1IVWA 2E22A 4OJZA 1JYVA 1OJPA 3T08A 3CZSA 2CFKA 3QDEA 4AQ0A 1W7CA 3WIRA 1NS7A 3EJSA 2OW7A 4RNLA 5E1QA 2CG1A 3MUY1 2D1WA 1RWGA 4KFDA 2WYIA 2OW6A 2EAEA 1ULVA 1UG9A 3D3IA 1LVNA 3W7SA 1LURA 1DP0A 2XSGA 1RWCA 1PS3A 3LVTA 2E24A 1PX3A 1NSRA 4OK2A 1LXMA 3HIGA 2CFLA 3EJTA 3OBAA 1HMWA 1W3YA 3K25A 1RW9A 2HTBA 3D4YA 1DYUA 3BLBA 2F1AA 4FNRA 1X1HA 1AV4A 3S4BA 3NJXA 1HM3A 1J0MA 1QX1A 3NREA 4EV2A 3HIIA 3BUPA 4BTWA 1W6GA 3DYMA 2WCOA 1K1YA 2WVYA 3VD3A 1NS4A 2CFGA 4KFFA 3KIIA 2JKAA 1A2VA 3W7WA 4MMIA 2ZQ0A 3T0UA
chains in the Genus database with same CATH topology
2WW3A 3VSMA 4BZGA 3OB8A 2WW1A 3E7JA 3T09A 3VD5A 1JYNA 4J5TA 1JZ5A 2CIRA 1JZ4A 1NKGA 4DUXA 1JZ3A 1OJMA 1NS0A 3ECQA 1K1WA 3IAQA 4FNVA 3T0DA 3IAPA 1MN0A 1NSVA 3CZJA 1LOHA 2CIQA 3MV01 1NS8A 3MWXA 5JMDA 1Z45A 2WVXB 1C82A 1JYXA 1N7PA 2FUQA 1NSMA 3NJVA 1CB8A 1YQ2A 4BZEA 1F1SA 2E22A 3TY1A 1K1XA 5A1AA 4OJZA 1HM2A 1JYVA 3E80A 1OJPA 3T08A 1N7NA 2CISA 3I3BA 1NSXA 3AFLA 4AQ0A 3A24A 1NS7A 3A0OA 2BRVX 2JKPA 4RNLA 5E1QA 3WVFA 3T2PA 3WFAA 4DUWA 2WW2A 3DYPA 1PX4A 1OJOA 3VDCA 3IMHA 3MUY1 1TXKA 3VD9A 1MMUA 4DUVA 1RWGA 3VDBA 1N7QA 3OS7A 1ULVA 1UG9A 1J0NA 3BGAA 1L7KA 1LURA 3I3DA 1RWFA 1DP0A 2WVXA 2XSGA 3DECA 1EGUA 1JZ2A 1RWCA 4TTGA 1MMXA 4MMHA 1NSSA 1X1JA 2E24A 1PX3A 1YGAA 1NSRA 4OK2A 3T0BA 1X1IA 1LXMA 1JOVA 1NSZA 2ZXQA 5JMFA 2BRPA 3OBAA 1HMWA 1W3YA 3K25A 4NEIA 4OK4A 1RW9A 2HTBA 1NS2A 1HMUA 3VSNA 1LF9A 1OJNA 3T2QA 3T2OA 2FUTA 1X1HA 4BZHA 1F4AA 1NSUA 1F4HA 2WDAA 3DYOA 1JZ8A 1RWHA 3NJXA 3J7HA 1HM3A 1RWAA 1LF6A 1J0MA 1SNZA 1N7OA 3NREA 1MMZA 1L7JA 3BLCA 2HTAA 1JZ7A 2WVZA 2D73A 3VDAA 1HN0A 2WCOA 3DYMA 2WZSA 1K1YA 2WVYA 3SEPA 1SO0A 1N7RA 3VD3A 1I8QA 1MMYA 1LXKA 3I3EA 1NS4A 1JZ6A 3VD7A 1JYWA 1HN1A 3DCDA 2JKAA 2WW0A 4BZFA 3E1F1 2XHNA 3T0AA 3MV11 2X03A 3MUZ1 4MMIA 3Q1NA 1F9GA 2BRWA 2ZQ0A 2Q1FA 3BS6A 2JKEA 3VD4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3TY1 A; 
#chains in the Genus database with same CATH topology
 1V7V A;  1O7D D;  2OQE C;  1W2Z A;  3DDF A;  1D6Y A;  3E7J A;  4J5T A;  1KSI A;  4KFE A;  1RKY A;  1NKG A;  1W6C A;  3DX2 A;  3IAQ A;  2C11 A;  1NSV A;  2F7O A;  1NS8 A;  3MWX A;  1N7P A;  2FUQ A;  2OOV C;  1TQV A;  1CB8 A;  2WGQ A;  1YQ2 A;  2OQE A;  1F1S A;  3TY1 A;  1HWW A;  5A1A A;  2CQS A;  1W5Z A;  3E80 A;  3D50 A;  3AFJ A;  3AFL A;  1R33 A;  1V7X A;  2F18 A;  3A0O A;  2BRV X;  3WVF A;  3MPH A;  3RSY A;  2E2V A;  2W0Q A;  3VDC A;  3VD9 A;  3VDB A;  1N7Q A;  1L7K A;  1QWN A;  2CWT A;  1RWF A;  2WVX A;  3DEC A;  4MMH A;  2RDY A;  3X3Z A;  3LOY A;  4FNQ A;  4K35 A;  3T0B A;  1X1I A;  1JOV A;  1IU7 A;  1WMP A;  2BRP A;  4NEI A;  2FYV A;  2XN1 A;  1HMU A;  3ACT A;  4FNT A;  1TU5 A;  3W7T A;  1F4A A;  1F4H A;  2WYH A;  4BTX A;  1RWH A;  3BLC A;  2HTA A;  3D4Z A;  1JZ7 A;  3VDA A;  5CA3 A;  1HN0 A;  2F7Q A;  3S4C A;  1I8Q A;  1MMY A;  2E2T A;  3I3E A;  1JZ6 A;  3VD7 A;  1HN1 A;  3DCD A;  3BVW A;  2WW0 A;  4BZF A;  2XHN A;  3KN4 A;  2X03 A;  2Y74 A;  2Q1F A;  3BS6 A;  2JKE A;  3OB8 A;  4K3A A;  4FNU A;  2WW1 A;  1JRQ A;  2F1B A;  1OJM A;  1K1W A;  3IAP A;  1MN0 A;  3QFY A;  2WOF A;  1WMN A;  1LOH A;  3NBB A;  3BUB A;  1US1 A;  1Z45 A;  3N9H A;  1N9E A;  3ALA A;  4BZE A;  1K1X A;  1HXK A;  3AMO B;  1N7N A;  2CIS A;  1HTY A;  3A24 A;  1SII A;  1UI8 A;  1R34 A;  4KTR A;  3DX1 A;  3BVU A;  3T2P A;  3WFA A;  1TQU A;  4DUW A;  4KTP A;  1OJO A;  1MMU A;  2Y73 A;  3OS7 A;  3BGA A;  2E2U A;  3DX4 A;  1JZ2 A;  2EAB A;  1WMO A;  1MMX A;  3PGB A;  1X1J A;  1YGA A;  1UI7 A;  1IVV A;  5JMF A;  4BTY A;  1AVL A;  2OOV A;  4OK4 A;  3BVT A;  3W7U A;  3VSN A;  1OJN A;  1EKM A;  3D52 A;  3DX0 A;  1V7W A;  4BZH A;  1NSU A;  2WDA A;  3DYO A;  2CFD A;  2PNC A;  3J7H A;  1LF6 A;  1SNZ A;  1L7J A;  2ZL8 A;  1D6U A;  3SEP A;  1SO0 A;  3BUD A;  1LXK A;  2CWU A;  4FNP A;  3BVV A;  1QAK A;  1JYW A;  1QAL A;  3E1F 1;  3T0A A;  2CFW A;  3MV1 1;  3Q1N A;  1F9G A;  3X3Y A;  3SXX A;  2WW3 A;  3VSM A;  1PU4 A;  1RJO A;  3VD5 A;  1JYN A;  3EJP A;  2CIR A;  1JZ5 A;  1JZ3 A;  3ECQ A;  1NS0 A;  5GW7 A;  3RRS A;  2F7R A;  3T0D A;  2CIQ A;  3MV0 1;  2WVX B;  3EJU A;  1NSM A;  3NJV A;  2EAC A;  2CG0 A;  2CWV A;  1HM2 A;  2YX9 A;  3ACS A;  3X42 A;  3I3B A;  1NSX A;  3S4D A;  3NBJ A;  2EAD A;  3K5T A;  1IQX A;  2JKP A;  3W7X A;  5KBP A;  3AMO A;  1OAC A;  2F7P A;  2WW2 A;  3DYP A;  1PX4 A;  3IMH A;  1TXK A;  2ALW A;  4DUV A;  4FNS A;  2XN0 A;  1SIH A;  1SPU A;  1J0N A;  2WOH A;  2YFO A;  3EJQ A;  1H54 A;  3I3D A;  4UFC A;  3X3X A;  4TTG A;  1EGU A;  1NSS A;  1QWU A;  3EJR A;  3WA2 X;  1NSZ A;  2ZXQ A;  2BT3 A;  1NS2 A;  3DX3 A;  3BUQ A;  1LF9 A;  3T2Q A;  3S4A A;  1TQW A;  3T2O A;  2FUT A;  3BUI A;  3X41 A;  3QG0 A;  1JZ8 A;  1RWA A;  1N7O A;  2XN2 A;  1MMZ A;  2WVZ A;  2D73 A;  3BVX A;  1IQY A;  2WZS A;  2YFN A;  1D6Z A;  1N7R A;  1TQS A;  3HI7 A;  3DDG A;  3QFZ A;  2WO0 A;  3MUZ 1;  2BRW A;  4BZG A;  3CZN A;  2CQT A;  3VD4 A;  1TQT A;  3MI6 A;  3D51 A;  3T09 A;  3CV5 A;  1JZ4 A;  4DUX A;  3SX1 A;  4FNV A;  1IVX A;  3CZJ A;  3X40 A;  3WIQ A;  1W4N A;  5JMD A;  2C10 A;  1C82 A;  1JYX A;  3WA3 A;  1IVU A;  1QAF A;  4EV5 A;  1AVK A;  1IVW A;  2E22 A;  4OJZ A;  1JYV A;  1OJP A;  3T08 A;  3CZS A;  2CFK A;  3QDE A;  4AQ0 A;  1W7C A;  3WIR A;  1NS7 A;  3EJS A;  2OW7 A;  4RNL A;  5E1Q A;  2CG1 A;  3MUY 1;  2D1W A;  1RWG A;  4KFD A;  2WYI A;  2OW6 A;  2EAE A;  1ULV A;  1UG9 A;  3D3I A;  1LVN A;  3W7S A;  1LUR A;  1DP0 A;  2XSG A;  1RWC A;  1PS3 A;  3LVT A;  2E24 A;  1PX3 A;  1NSR A;  4OK2 A;  1LXM A;  3HIG A;  2CFL A;  3EJT A;  3OBA A;  1HMW A;  1W3Y A;  3K25 A;  1RW9 A;  2HTB A;  3D4Y A;  1DYU A;  3BLB A;  2F1A A;  4FNR A;  1X1H A;  1AV4 A;  3S4B A;  3NJX A;  1HM3 A;  1J0M A;  1QX1 A;  3NRE A;  4EV2 A;  3HII A;  3BUP A;  4BTW A;  1W6G A;  3DYM A;  2WCO A;  1K1Y A;  2WVY A;  3VD3 A;  1NS4 A;  2CFG A;  4KFF A;  3KII A;  2JKA A;  1A2V A;  3W7W A;  4MMI A;  2ZQ0 A;  3T0U A; 
#chains in the Genus database with same CATH homology
 2WW3 A;  3VSM A;  4BZG A;  3OB8 A;  2WW1 A;  3E7J A;  3T09 A;  3VD5 A;  1JYN A;  4J5T A;  1JZ5 A;  2CIR A;  1JZ4 A;  1NKG A;  4DUX A;  1JZ3 A;  1OJM A;  1NS0 A;  3ECQ A;  1K1W A;  3IAQ A;  4FNV A;  3T0D A;  3IAP A;  1MN0 A;  1NSV A;  3CZJ A;  1LOH A;  2CIQ A;  3MV0 1;  1NS8 A;  3MWX A;  5JMD A;  1Z45 A;  2WVX B;  1C82 A;  1JYX A;  1N7P A;  2FUQ A;  1NSM A;  3NJV A;  1CB8 A;  1YQ2 A;  4BZE A;  1F1S A;  2E22 A;  3TY1 A;  1K1X A;  5A1A A;  4OJZ A;  1HM2 A;  1JYV A;  3E80 A;  1OJP A;  3T08 A;  1N7N A;  2CIS A;  3I3B A;  1NSX A;  3AFL A;  4AQ0 A;  3A24 A;  1NS7 A;  3A0O A;  2BRV X;  2JKP A;  4RNL A;  5E1Q A;  3WVF A;  3T2P A;  3WFA A;  4DUW A;  2WW2 A;  3DYP A;  1PX4 A;  1OJO A;  3VDC A;  3IMH A;  3MUY 1;  1TXK A;  3VD9 A;  1MMU A;  4DUV A;  1RWG A;  3VDB A;  1N7Q A;  3OS7 A;  1ULV A;  1UG9 A;  1J0N A;  3BGA A;  1L7K A;  1LUR A;  3I3D A;  1RWF A;  1DP0 A;  2WVX A;  2XSG A;  3DEC A;  1EGU A;  1JZ2 A;  1RWC A;  4TTG A;  1MMX A;  4MMH A;  1NSS A;  1X1J A;  2E24 A;  1PX3 A;  1YGA A;  1NSR A;  4OK2 A;  3T0B A;  1X1I A;  1LXM A;  1JOV A;  1NSZ A;  2ZXQ A;  5JMF A;  2BRP A;  3OBA A;  1HMW A;  1W3Y A;  3K25 A;  4NEI A;  4OK4 A;  1RW9 A;  2HTB A;  1NS2 A;  1HMU A;  3VSN A;  1LF9 A;  1OJN A;  3T2Q A;  3T2O A;  2FUT A;  1X1H A;  4BZH A;  1F4A A;  1NSU A;  1F4H A;  2WDA A;  3DYO A;  1JZ8 A;  1RWH A;  3NJX A;  3J7H A;  1HM3 A;  1RWA A;  1LF6 A;  1J0M A;  1SNZ A;  1N7O A;  3NRE A;  1MMZ A;  1L7J A;  3BLC A;  2HTA A;  1JZ7 A;  2WVZ A;  2D73 A;  3VDA A;  1HN0 A;  2WCO A;  3DYM A;  2WZS A;  1K1Y A;  2WVY A;  3SEP A;  1SO0 A;  1N7R A;  3VD3 A;  1I8Q A;  1MMY A;  1LXK A;  3I3E A;  1NS4 A;  1JZ6 A;  3VD7 A;  1JYW A;  1HN1 A;  3DCD A;  2JKA A;  2WW0 A;  4BZF A;  3E1F 1;  2XHN A;  3T0A A;  3MV1 1;  2X03 A;  3MUZ 1;  4MMI A;  3Q1N A;  1F9G A;  2BRW A;  2ZQ0 A;  2Q1F A;  3BS6 A;  2JKE A;  3VD4 A; 
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