3TY1A

Crystal structure of a putative aldose 1-epimerase (kpn_04629) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at 1.90 a resolution
Total Genus 108
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
108
sequence length
384
structure length
384
Chain Sequence
b'GAKTWVLTNAEEGIDKGNWQINSDQLKVKDHAFSIEQKVLHGGKQEGSKILTIHSKDGLTITLSPTRGMNLLRIEGFGSRMGWDSPVKEVVNPAFINLESRNGLGWLEGFNEMMVRCGYEWTGHPVTADGQIYTLHGKAGNTPASLVEVEVADSAPYEIRIRGLVKESTFKKADLQTLTELRYVPGSNSFSLHDVLTNHADYPHDYQIIYHSNFGTPILEEGARFLAPISSISPFNDYAKSGLKTWQTYQGPTKDFDEMVFNIQPLADENHQTLAAVVNKAGDKGASIQFDTRQLPVLTLWKNTDTVKQGYVTGIEPGTSYAYPVTIERKQKRVKQLQPGASAQFDLTYTLLHDSAQVAAVEQKIAKIQGDNKVAENETPIAKE'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Hypothetical aldose 1-epimerase
publication title Crystal structure of a Hypothetical aldose 1-epimerase (KPN_04629) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.90 A resolution
rcsb
source organism Klebsiella pneumoniae subsp. pneumoniae mgh 78578
molecule tags Isomerase
total genus 108
structure length 384
sequence length 384
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2011-09-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF14486 DUF4432 Domain of unknown function (DUF4432)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
2.70.98.80 Mainly Beta Distorted Sandwich Beta-galactosidase; Chain A, domain 5 Beta-galactosidase; Chain A, domain 5 3ty1A00
3TY1A
chains in the Genus database with same CATH superfamily
3VDAA 3EJTA 4DUVA 3BVWA 1QALA 1RWGA 4BZEA 3BUPA 3NJVA 1RW9A 3J7HA 1MMUA 1JYNA 2CWTA 1D6YA 3X41A 3LVTA 1JYVA 3RSYA 2ZQ0A 4K35A 1LURA 3MUZ1 1HTYA 1K1WA 1H54A 2CISA 1IVUA 3X3YA 2C10A 3T2QA 3D4YA 3BLCA 3MI6A 3DYPA 1HN0A 3BUIA 3LOYA 3HIIA 2CFDA 1NS2A 4FNPA 2XN0A 1SPUA 1IVVA 3DX0A 1X1IA 1JZ2A 2OW7A 3TY1A 3DX2A 1LOHA 1CB8A 1N7RA 2WOFA 1MMZA 1W6GA 2YX9A 4FNTA 4FNSA 2CFLA 1US1A 3D52A 1NS7A 3HIGA 3X3ZA 2CFKA 4FNUA 2F1AA 2CQSA 1R34A 4MMHA 1LF9A 3N9HA 4KFFA 3T0DA 4FNVA 3NBJA 1PX4A 3VD5A 1JZ4A 3CZJA 2OOVC 3IAPA 1WMOA 5JMDA 3DDGA 3A24A 1PX3A 2FYVA 4EV2A 4OK4A 3K25A 1RWCA 3EJUA 3SXXA 1F1SA 1QX1A 5A1AA 4UFCA 1HM2A 1Z45A 2XHNA 2JKPA 3DYOA 2WYHA 3T0UA 1C82A 3AFJA 3EJRA 3PGBA 2CFWA 2BRWA 1D6UA 3DYMA 4NEIA 3VSMA 3T2OA 1RJOA 3BVUA 3S4AA 1IVXA 1TQVA 2XN1A 2WDAA 3WA3A 1JZ6A 1PS3A 2YFOA 2HTAA 2E22A 3W7UA 1QAFA 1AVKA 1UG9A 3BVVA 2XSGA 3QFZA 4MMIA 1OJOA 1UI7A 4TTGA 1V7WA 4BZGA 1QAKA 4DUXA 2BRPA 1W3YA 2WYIA 1K1XA 2F18A 2HTBA 3ALAA 2E2TA 2WVXB 1JYXA 2EABA 1J0MA 1IQXA 2JKAA 3A0OA 3BGAA 3S4CA 1N9EA 2CIRA 3VD7A 2OW6A 2WVYA 3BVXA 3E1F1 3WIRA 4J5TA 2F1BA 2BT3A 2JKEA 1RWFA 1AV4A 4BTYA 1NKGA 3OBAA 1JZ8A 3AMOB 3VSNA 1SIIA 3DCDA 3MV01 3CZSA 1WMPA 1HXKA 2FUQA 3E80A 1O7DD 2F7RA 3QFYA 1HMUA 3T0BA 1NSSA 1TQUA 3DX4A 2EACA 1LF6A 3VD3A 2EADA 1EKMA 1NSVA 5KBPA 1HN1A 2E2UA 1LXMA 1EGUA 1QWNA 2WOHA 3BVTA 2CWVA 1X1JA 1W5ZA 3MWXA 4AQ0A 1X1HA 2F7OA 4FNRA 2XN2A 3KIIA 1RWHA 2F7QA 3S4DA 4KFEA 3W7XA 3EJPA 4KTPA 2ALWA 3D51A 3W7WA 1TQWA 2OQEC 1W7CA 3CZNA 1TQTA 3RRSA 1NSXA 1KSIA 3WA2X 3MUY1 3I3BA 1W2ZA 3NJXA 2OOVA 2WVZA 1I8QA 1F4HA 3OB8A 3E7JA 3D50A 1ULVA 3DX3A 3BUDA 3WVFA 1MMXA 4BTXA 1AVLA 2RDYA 1OJNA 3EJSA 1PU4A 3VDBA 3AMOA 3KN4A 2E24A 1IQYA 1YQ2A 1N7OA 3D3IA 3AFLA 1NSUA 3BUQA 2WW3A 1W6CA 3I3EA 5CA3A 2WO0A 4FNQA 1OJPA 3X42A 2WW1A 3NBBA 1MN0A 3QDEA 1LVNA 1JOVA 3WFAA 1JRQA 3ACTA 2FUTA 2CFGA 1D6ZA 3VD9A 1K1YA 2ZXQA 3ECQA 3I3DA 1IVWA 4KFDA 1JYWA 1N7NA 3EJQA 1JZ5A 2Y74A 3BUBA 4BZFA 2E2VA 4K3AA 1RWAA 5JMFA 3X40A 2CG1A 2Y73A 1OJMA 2ZL8A 1N7PA 5GW7A 2CWUA 3MV11 1NSMA 2WW0A 1WMNA 1LXKA 3NREA 2PNCA 3WIQA 1L7KA 1NSRA 4KTRA 3VDCA 3ACSA 3DX1A 3SEPA 3DDFA 3W7SA 1L7JA 1JZ3A 4OJZA 1NSZA 2WW2A 3K5TA 3X3XA 1RKYA 1DP0A 1UI8A 3VD4A 1A2VA 3Q1NA 1N7QA 2C11A 1F4AA 1R33A 1HWWA 3T09A 4BTWA 3T08A 4OK2A 1NS4A 2D73A 3BLBA 3D4ZA 1F9GA 4DUWA 3IAQA 2X03A 3BS6A 1SIHA 4EV5A 3HI7A 3S4BA 3DECA 3OS7A 2CQTA 2OQEA 1J0NA 2WCOA 2WVXA 2CIQA 1TXKA 2CG0A 2Q1FA 1DYUA 1SO0A 1IU7A 1HMWA 3MPHA 3CV5A 1JZ7A 1V7XA 2F7PA 1YGAA 1TQSA 1TU5A 1NS0A 1SNZA 2WZSA 2BRVX 3SX1A 3T0AA 3T2PA 2WGQA 2EAEA 1HM3A 3QG0A 3IMHA 1OACA 2W0QA 4RNLA 2D1WA 1NS8A 5E1QA 4BZHA 2YFNA 1V7VA 1QWUA 3W7TA 1MMYA 1W4NA
chains in the Genus database with same CATH topology
4OK4A 3VDAA 1JZ5A 4BZFA 3K25A 4DUVA 1RWCA 1RWGA 1RWAA 1F1SA 1X1JA 4BZEA 5A1AA 1HM2A 5JMFA 3NJVA 3MWXA 1Z45A 2XHNA 4AQ0A 1X1HA 2JKPA 1OJMA 1RW9A 3DYOA 3J7HA 1N7PA 1MMUA 1JYNA 1RWHA 3MV11 1NSMA 2WW0A 1C82A 1LXKA 3NREA 1L7KA 1NSRA 3VDCA 2BRWA 3DYMA 4NEIA 3SEPA 3VSMA 1JYVA 3T2OA 2ZQ0A 1LURA 3MUZ1 1L7JA 1JZ3A 4OJZA 1K1WA 1NSZA 1NSXA 2WW2A 2CISA 3MUY1 1DP0A 2WDAA 3I3BA 1JZ6A 3VD4A 3NJXA 2HTAA 3Q1NA 3T2QA 1N7QA 2WVZA 1I8QA 2E22A 1F4HA 1UG9A 3OB8A 2XSGA 3BLCA 4MMIA 1OJOA 4TTGA 3DYPA 1F4AA 3E7JA 4BZGA 4DUXA 1HN0A 2BRPA 1W3YA 3T09A 1K1XA 3T08A 4OK2A 1ULVA 2HTBA 1NS4A 3WVFA 1MMXA 2D73A 2WVXB 1JYXA 4DUWA 1F9GA 3IAQA 1J0MA 2X03A 1OJNA 1NS2A 2JKAA 3BS6A 3A0OA 3BGAA 3VDBA 2CIRA 3DECA 3VD7A 1X1IA 3OS7A 2WVYA 1JZ2A 3E1F1 3TY1A 4J5TA 2JKEA 1J0NA 2WCOA 1LOHA 2WVXA 1RWFA 2E24A 2CIQA 1CB8A 1YQ2A 1TXKA 1N7OA 2Q1FA 3AFLA 1SO0A 1NSUA 1NKGA 3OBAA 1JZ8A 2WW3A 1HMWA 1N7RA 3VSNA 3I3EA 3DCDA 1MMZA 1OJPA 1JZ7A 3MV01 1YGAA 2WW1A 1NS7A 1MN0A 2FUQA 1NS0A 3E80A 4MMHA 1SNZA 1LF9A 1JOVA 2WZSA 4FNVA 1HMUA 3T0DA 3T0BA 1NSSA 3WFAA 2BRVX 1PX4A 3VD5A 1JZ4A 3T0AA 2FUTA 3CZJA 3T2PA 3IAPA 1LF6A 3VD3A 3VD9A 1HM3A 4RNLA 3IMHA 1K1YA 2ZXQA 3ECQA 5JMDA 1MMYA 3I3DA 1NS8A 1HN1A 5E1QA 4BZHA 3A24A 1JYWA 1N7NA 1LXMA 1EGUA 1PX3A 1NSVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3TY1 A; 
#chains in the Genus database with same CATH topology
 3VDA A;  3EJT A;  4DUV A;  3BVW A;  1QAL A;  1RWG A;  4BZE A;  3BUP A;  3NJV A;  1RW9 A;  3J7H A;  1MMU A;  1JYN A;  2CWT A;  1D6Y A;  3X41 A;  3LVT A;  1JYV A;  3RSY A;  2ZQ0 A;  4K35 A;  1LUR A;  3MUZ 1;  1HTY A;  1K1W A;  1H54 A;  2CIS A;  1IVU A;  3X3Y A;  2C10 A;  3T2Q A;  3D4Y A;  3BLC A;  3MI6 A;  3DYP A;  1HN0 A;  3BUI A;  3LOY A;  3HII A;  2CFD A;  1NS2 A;  4FNP A;  2XN0 A;  1SPU A;  1IVV A;  3DX0 A;  1X1I A;  1JZ2 A;  2OW7 A;  3TY1 A;  3DX2 A;  1LOH A;  1CB8 A;  1N7R A;  2WOF A;  1MMZ A;  1W6G A;  2YX9 A;  4FNT A;  4FNS A;  2CFL A;  1US1 A;  3D52 A;  1NS7 A;  3HIG A;  3X3Z A;  2CFK A;  4FNU A;  2F1A A;  2CQS A;  1R34 A;  4MMH A;  1LF9 A;  3N9H A;  4KFF A;  3T0D A;  4FNV A;  3NBJ A;  1PX4 A;  3VD5 A;  1JZ4 A;  3CZJ A;  2OOV C;  3IAP A;  1WMO A;  5JMD A;  3DDG A;  3A24 A;  1PX3 A;  2FYV A;  4EV2 A;  4OK4 A;  3K25 A;  1RWC A;  3EJU A;  3SXX A;  1F1S A;  1QX1 A;  5A1A A;  4UFC A;  1HM2 A;  1Z45 A;  2XHN A;  2JKP A;  3DYO A;  2WYH A;  3T0U A;  1C82 A;  3AFJ A;  3EJR A;  3PGB A;  2CFW A;  2BRW A;  1D6U A;  3DYM A;  4NEI A;  3VSM A;  3T2O A;  1RJO A;  3BVU A;  3S4A A;  1IVX A;  1TQV A;  2XN1 A;  2WDA A;  3WA3 A;  1JZ6 A;  1PS3 A;  2YFO A;  2HTA A;  2E22 A;  3W7U A;  1QAF A;  1AVK A;  1UG9 A;  3BVV A;  2XSG A;  3QFZ A;  4MMI A;  1OJO A;  1UI7 A;  4TTG A;  1V7W A;  4BZG A;  1QAK A;  4DUX A;  2BRP A;  1W3Y A;  2WYI A;  1K1X A;  2F18 A;  2HTB A;  3ALA A;  2E2T A;  2WVX B;  1JYX A;  2EAB A;  1J0M A;  1IQX A;  2JKA A;  3A0O A;  3BGA A;  3S4C A;  1N9E A;  2CIR A;  3VD7 A;  2OW6 A;  2WVY A;  3BVX A;  3E1F 1;  3WIR A;  4J5T A;  2F1B A;  2BT3 A;  2JKE A;  1RWF A;  1AV4 A;  4BTY A;  1NKG A;  3OBA A;  1JZ8 A;  3AMO B;  3VSN A;  1SII A;  3DCD A;  3MV0 1;  3CZS A;  1WMP A;  1HXK A;  2FUQ A;  3E80 A;  1O7D D;  2F7R A;  3QFY A;  1HMU A;  3T0B A;  1NSS A;  1TQU A;  3DX4 A;  2EAC A;  1LF6 A;  3VD3 A;  2EAD A;  1EKM A;  1NSV A;  5KBP A;  1HN1 A;  2E2U A;  1LXM A;  1EGU A;  1QWN A;  2WOH A;  3BVT A;  2CWV A;  1X1J A;  1W5Z A;  3MWX A;  4AQ0 A;  1X1H A;  2F7O A;  4FNR A;  2XN2 A;  3KII A;  1RWH A;  2F7Q A;  3S4D A;  4KFE A;  3W7X A;  3EJP A;  4KTP A;  2ALW A;  3D51 A;  3W7W A;  1TQW A;  2OQE C;  1W7C A;  3CZN A;  1TQT A;  3RRS A;  1NSX A;  1KSI A;  3WA2 X;  3MUY 1;  3I3B A;  1W2Z A;  3NJX A;  2OOV A;  2WVZ A;  1I8Q A;  1F4H A;  3OB8 A;  3E7J A;  3D50 A;  1ULV A;  3DX3 A;  3BUD A;  3WVF A;  1MMX A;  4BTX A;  1AVL A;  2RDY A;  1OJN A;  3EJS A;  1PU4 A;  3VDB A;  3AMO A;  3KN4 A;  2E24 A;  1IQY A;  1YQ2 A;  1N7O A;  3D3I A;  3AFL A;  1NSU A;  3BUQ A;  2WW3 A;  1W6C A;  3I3E A;  5CA3 A;  2WO0 A;  4FNQ A;  1OJP A;  3X42 A;  2WW1 A;  3NBB A;  1MN0 A;  3QDE A;  1LVN A;  1JOV A;  3WFA A;  1JRQ A;  3ACT A;  2FUT A;  2CFG A;  1D6Z A;  3VD9 A;  1K1Y A;  2ZXQ A;  3ECQ A;  3I3D A;  1IVW A;  4KFD A;  1JYW A;  1N7N A;  3EJQ A;  1JZ5 A;  2Y74 A;  3BUB A;  4BZF A;  2E2V A;  4K3A A;  1RWA A;  5JMF A;  3X40 A;  2CG1 A;  2Y73 A;  1OJM A;  2ZL8 A;  1N7P A;  5GW7 A;  2CWU A;  3MV1 1;  1NSM A;  2WW0 A;  1WMN A;  1LXK A;  3NRE A;  2PNC A;  3WIQ A;  1L7K A;  1NSR A;  4KTR A;  3VDC A;  3ACS A;  3DX1 A;  3SEP A;  3DDF A;  3W7S A;  1L7J A;  1JZ3 A;  4OJZ A;  1NSZ A;  2WW2 A;  3K5T A;  3X3X A;  1RKY A;  1DP0 A;  1UI8 A;  3VD4 A;  1A2V A;  3Q1N A;  1N7Q A;  2C11 A;  1F4A A;  1R33 A;  1HWW A;  3T09 A;  4BTW A;  3T08 A;  4OK2 A;  1NS4 A;  2D73 A;  3BLB A;  3D4Z A;  1F9G A;  4DUW A;  3IAQ A;  2X03 A;  3BS6 A;  1SIH A;  4EV5 A;  3HI7 A;  3S4B A;  3DEC A;  3OS7 A;  2CQT A;  2OQE A;  1J0N A;  2WCO A;  2WVX A;  2CIQ A;  1TXK A;  2CG0 A;  2Q1F A;  1DYU A;  1SO0 A;  1IU7 A;  1HMW A;  3MPH A;  3CV5 A;  1JZ7 A;  1V7X A;  2F7P A;  1YGA A;  1TQS A;  1TU5 A;  1NS0 A;  1SNZ A;  2WZS A;  2BRV X;  3SX1 A;  3T0A A;  3T2P A;  2WGQ A;  2EAE A;  1HM3 A;  3QG0 A;  3IMH A;  1OAC A;  2W0Q A;  4RNL A;  2D1W A;  1NS8 A;  5E1Q A;  4BZH A;  2YFN A;  1V7V A;  1QWU A;  3W7T A;  1MMY A;  1W4N A; 
#chains in the Genus database with same CATH homology
 4OK4 A;  3VDA A;  1JZ5 A;  4BZF A;  3K25 A;  4DUV A;  1RWC A;  1RWG A;  1RWA A;  1F1S A;  1X1J A;  4BZE A;  5A1A A;  1HM2 A;  5JMF A;  3NJV A;  3MWX A;  1Z45 A;  2XHN A;  4AQ0 A;  1X1H A;  2JKP A;  1OJM A;  1RW9 A;  3DYO A;  3J7H A;  1N7P A;  1MMU A;  1JYN A;  1RWH A;  3MV1 1;  1NSM A;  2WW0 A;  1C82 A;  1LXK A;  3NRE A;  1L7K A;  1NSR A;  3VDC A;  2BRW A;  3DYM A;  4NEI A;  3SEP A;  3VSM A;  1JYV A;  3T2O A;  2ZQ0 A;  1LUR A;  3MUZ 1;  1L7J A;  1JZ3 A;  4OJZ A;  1K1W A;  1NSZ A;  1NSX A;  2WW2 A;  2CIS A;  3MUY 1;  1DP0 A;  2WDA A;  3I3B A;  1JZ6 A;  3VD4 A;  3NJX A;  2HTA A;  3Q1N A;  3T2Q A;  1N7Q A;  2WVZ A;  1I8Q A;  2E22 A;  1F4H A;  1UG9 A;  3OB8 A;  2XSG A;  3BLC A;  4MMI A;  1OJO A;  4TTG A;  3DYP A;  1F4A A;  3E7J A;  4BZG A;  4DUX A;  1HN0 A;  2BRP A;  1W3Y A;  3T09 A;  1K1X A;  3T08 A;  4OK2 A;  1ULV A;  2HTB A;  1NS4 A;  3WVF A;  1MMX A;  2D73 A;  2WVX B;  1JYX A;  4DUW A;  1F9G A;  3IAQ A;  1J0M A;  2X03 A;  1OJN A;  1NS2 A;  2JKA A;  3BS6 A;  3A0O A;  3BGA A;  3VDB A;  2CIR A;  3DEC A;  3VD7 A;  1X1I A;  3OS7 A;  2WVY A;  1JZ2 A;  3E1F 1;  3TY1 A;  4J5T A;  2JKE A;  1J0N A;  2WCO A;  1LOH A;  2WVX A;  1RWF A;  2E24 A;  2CIQ A;  1CB8 A;  1YQ2 A;  1TXK A;  1N7O A;  2Q1F A;  3AFL A;  1SO0 A;  1NSU A;  1NKG A;  3OBA A;  1JZ8 A;  2WW3 A;  1HMW A;  1N7R A;  3VSN A;  3I3E A;  3DCD A;  1MMZ A;  1OJP A;  1JZ7 A;  3MV0 1;  1YGA A;  2WW1 A;  1NS7 A;  1MN0 A;  2FUQ A;  1NS0 A;  3E80 A;  4MMH A;  1SNZ A;  1LF9 A;  1JOV A;  2WZS A;  4FNV A;  1HMU A;  3T0D A;  3T0B A;  1NSS A;  3WFA A;  2BRV X;  1PX4 A;  3VD5 A;  1JZ4 A;  3T0A A;  2FUT A;  3CZJ A;  3T2P A;  3IAP A;  1LF6 A;  3VD3 A;  3VD9 A;  1HM3 A;  4RNL A;  3IMH A;  1K1Y A;  2ZXQ A;  3ECQ A;  5JMD A;  1MMY A;  3I3D A;  1NS8 A;  1HN1 A;  5E1Q A;  4BZH A;  3A24 A;  1JYW A;  1N7N A;  1LXM A;  1EGU A;  1PX3 A;  1NSV A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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