1FMAE

Molybdopterin synthase (moad/moae)
Total Genus 43

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
43
sequence length
149
structure length
142
Chain Sequence
AETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRVNALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFVGVTSAHRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (15-23)S1 (4-9)S3 (49-54)EMPTYTI1 (25-28)AH2 (58-73)S6 (92-101)TIV1 (26-29)S2 (30-38)AH4 (141-149)TII1 (89-92)S5 (86-88)S4 (76-84)TVIII2 (101-104)AH3 (104-121)S7 (124-130)O1 (122-124)S8 (133-136)TI3 (130-133)TI2 (55-58)Updating...
connected with : NaN
molecule tags Transferase
source organism Escherichia coli
publication title Crystal structure of molybdopterin synthase and its evolutionary relationship to ubiquitin activation.
pubmed doi rcsb
molecule keywords MOLYBDOPTERIN CONVERTING FACTOR, SUBUNIT 1
total genus 43
structure length 142
sequence length 149
ec nomenclature ec 2.8.1.12: Molybdopterin synthase.
pdb deposition date 2000-08-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
E PF02391 MoaE MoaE protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1170.40 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3 Molybdopterin biosynthesis MoaE subunit 1fmaE00
3BIIE 2QIEA 1NVJA 2Q5WE 2WP4A 1FMAE 3RPFA 4AP8A 2OMDA 5MPOC 1FM0E 1NVIE
chains in the Genus database with same CATH superfamily
2Q5WE 3CC2H 4GA5A 1QPOA 1M90J 4GA4A 1VQ5H 5HUPA 4US8A 1VQLH 1VQ6H 1QPQA 1FFUB 3CPWH 3NRZC 5JVGJ 4UY8M 2QIEA 3NVYC 1YI2H 2WK6A 4YYYA 1K9MJ 3WO1A 4C7YA 2I14A 5HL7J 3CC4H 1FIQC 3CCSH 1VQNH 3G6EH 1WYGA 3CF5J 3C2OA 3EUB4 3C2RA 5HUOA 3RPFA 5GAEN 1Y69K 1S72H 1QAPA 4WFBJ 3CCEH 5AYZA 4IOCJ 3NS1C 3G71H 4LHMA 3PIOJ 3CCQH 1YJ9H 3CCJH 1JRPB 1VQPH 3AM9A 1N5WB 3I55H 3CMAH 5GAGN 1N62B 3PIPJ 1FM0E 5EY3A 5DM6J 4EAFA 1NVJA 3G4SH 5AN9F 3GNNA 4XR5A 2QEXH 2QA4H 1VQOH 1DGJA 1KC8J 1QVFH 5MPOC 1QPNA 2J0FA 1UOUA 3CXCH 4ZOHA 3CC7H 2B7NA 2ZJRJ 1YJWH 1Q81J 2OTJH 3NVZC 1VQKH 2WP4A 4EADA 3DLLJ 1OTPA 5GADN 1ZXIB 1O4UA 2E3TA 3CD6H 3TQVA 5GAHN 4KWWA 3FAHA 1YITH 4C7ZA 1BRWA 3AMZA 2I1OA 3I56H 1M1KJ 3NVWC 3CCRH 2W3RB 1VQ7H 3FC4A 1Q7YJ 4IOAJ 3BIIE 3WNZA 4WF9J 1K73J 5EP8A 2OTLH 1WKIA 3J7ZM 1N60B 1YTKA 1N8RJ 1RM6A 1AZYA 4YEKA 1N5XA 4C80A 2W55B 1YIJH 2W3SB 1N61B 4US9A 1FO4A 4WCEJ 3ETRC 1VQ9H 1Q86J 3CCMH 2ZJQJ 4USAA 3H5QA 4GA6A 1JROB 4AP8A 1VQ8H 2OMDA 5AYYA 3VMMA 4IO9J 1NJIJ 1VQMH 3L4PA 5HULA 1QVGH 2B7QA 1KQSH 1YJNH 1QPRA 3C2FA 1VQ4H 2TPTA 1SB3A 5H1SO 2DSJA 3CMEH 1YHQH 1SIJA 3L0GA 4U67J 3C2EA 1KD1J 3AN1A 5MLCO 4WFNJ 1YTDA 3PAJA 1Q82J 1NVIE 2W54B 2ZJPJ 4I9AA 3CCUH 5DM7J 2WK5A 3C2VA 2PA2A 5JVHJ 1FMAE 1X1OA 1V97A 3NVVC 5AYXA 3OW2H 3WO0A 3B9JC 1FFVB 1N63B 4WFAJ 4X46A 3CCVH 1VLBA 1W2BH 3SR6C 2B7PA 2JBMA 1K8AJ 1JJ2H 1VDVA 1YTEA 4KWVA 3CCLH
chains in the Genus database with same CATH topology
3BIIE 2QIEA 1NVJA 2Q5WE 2WP4A 1FMAE 3RPFA 4AP8A 2OMDA 5MPOC 1FM0E 1NVIE
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BII E;  2QIE A;  1NVJ A;  2Q5W E;  2WP4 A;  1FMA E;  3RPF A;  4AP8 A;  2OMD A;  5MPO C;  1FM0 E;  1NVI E; 
#chains in the Genus database with same CATH topology
 2Q5W E;  3CC2 H;  4GA5 A;  1QPO A;  1M90 J;  4GA4 A;  1VQ5 H;  5HUP A;  4US8 A;  1VQL H;  1VQ6 H;  1QPQ A;  1FFU B;  3CPW H;  3NRZ C;  5JVG J;  4UY8 M;  2QIE A;  3NVY C;  1YI2 H;  2WK6 A;  4YYY A;  1K9M J;  3WO1 A;  4C7Y A;  2I14 A;  5HL7 J;  3CC4 H;  1FIQ C;  3CCS H;  1VQN H;  3G6E H;  1WYG A;  3CF5 J;  3C2O A;  3EUB 4;  3C2R A;  5HUO A;  3RPF A;  5GAE N;  1Y69 K;  1S72 H;  1QAP A;  4WFB J;  3CCE H;  5AYZ A;  4IOC J;  3NS1 C;  3G71 H;  4LHM A;  3PIO J;  3CCQ H;  1YJ9 H;  3CCJ H;  1JRP B;  1VQP H;  3AM9 A;  1N5W B;  3I55 H;  3CMA H;  5GAG N;  1N62 B;  3PIP J;  1FM0 E;  5EY3 A;  5DM6 J;  4EAF A;  1NVJ A;  3G4S H;  5AN9 F;  3GNN A;  4XR5 A;  2QEX H;  2QA4 H;  1VQO H;  1DGJ A;  1KC8 J;  1QVF H;  5MPO C;  1QPN A;  2J0F A;  1UOU A;  3CXC H;  4ZOH A;  3CC7 H;  2B7N A;  2ZJR J;  1YJW H;  1Q81 J;  2OTJ H;  3NVZ C;  1VQK H;  2WP4 A;  4EAD A;  3DLL J;  1OTP A;  5GAD N;  1ZXI B;  1O4U A;  2E3T A;  3CD6 H;  3TQV A;  5GAH N;  4KWW A;  3FAH A;  1YIT H;  4C7Z A;  1BRW A;  3AMZ A;  2I1O A;  3I56 H;  1M1K J;  3NVW C;  3CCR H;  2W3R B;  1VQ7 H;  3FC4 A;  1Q7Y J;  4IOA J;  3BII E;  3WNZ A;  4WF9 J;  1K73 J;  5EP8 A;  2OTL H;  1WKI A;  3J7Z M;  1N60 B;  1YTK A;  1N8R J;  1RM6 A;  1AZY A;  4YEK A;  1N5X A;  4C80 A;  2W55 B;  1YIJ H;  2W3S B;  1N61 B;  4US9 A;  1FO4 A;  4WCE J;  3ETR C;  1VQ9 H;  1Q86 J;  3CCM H;  2ZJQ J;  4USA A;  3H5Q A;  4GA6 A;  1JRO B;  4AP8 A;  1VQ8 H;  2OMD A;  5AYY A;  3VMM A;  4IO9 J;  1NJI J;  1VQM H;  3L4P A;  5HUL A;  1QVG H;  2B7Q A;  1KQS H;  1YJN H;  1QPR A;  3C2F A;  1VQ4 H;  2TPT A;  1SB3 A;  5H1S O;  2DSJ A;  3CME H;  1YHQ H;  1SIJ A;  3L0G A;  4U67 J;  3C2E A;  1KD1 J;  3AN1 A;  5MLC O;  4WFN J;  1YTD A;  3PAJ A;  1Q82 J;  1NVI E;  2W54 B;  2ZJP J;  4I9A A;  3CCU H;  5DM7 J;  2WK5 A;  3C2V A;  2PA2 A;  5JVH J;  1FMA E;  1X1O A;  1V97 A;  3NVV C;  5AYX A;  3OW2 H;  3WO0 A;  3B9J C;  1FFV B;  1N63 B;  4WFA J;  4X46 A;  3CCV H;  1VLB A;  1W2B H;  3SR6 C;  2B7P A;  2JBM A;  1K8A J;  1JJ2 H;  1VDV A;  1YTE A;  4KWV A;  3CCL H; 
#chains in the Genus database with same CATH homology
 3BII E;  2QIE A;  1NVJ A;  2Q5W E;  2WP4 A;  1FMA E;  3RPF A;  4AP8 A;  2OMD A;  5MPO C;  1FM0 E;  1NVI E; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...

Application loaded.