2QIEA

Staphylococcus aureus molybdopterin synthase in complex with precursor z
Total Genus 40
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
40
sequence length
136
structure length
136
Chain Sequence
MKQFEIVIEPIQTEQYREFTINEYQGAVVVFTGHVREWTKGVKTEYLEYEAYIPMAEKKLAQIGDEINEKWPGTITSIVHRIGPLQISDIAVLIAVSSPHRKDAYRANEYAIERIKEIVPIWKKEIWEDGSKWQGH
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of a molybdopterin synthase-precursor Z complex: insight into its sulfur transfer mechanism and its role in molybdenum cofactor deficiency.
pubmed doi rcsb
molecule tags Transferase
source organism Staphylococcus aureus
molecule keywords Molybdopterin-converting factor subunit 2
total genus 40
structure length 136
sequence length 136
chains with identical sequence E, H, K
ec nomenclature ec 2.8.1.12: Molybdopterin synthase.
pdb deposition date 2007-07-04

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02391 MoaE MoaE protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1170.40 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3 Molybdopterin biosynthesis MoaE subunit 2qieA00
5MPOC 4AP8A 2QIEA 1FMAE 2Q5WE 2WP4A 3BIIE 3RPFA 1NVJA 1NVIE 1FM0E 2OMDA
chains in the Genus database with same CATH superfamily
3CC4H 1AZYA 1M1KJ 5EP8A 1O4UA 3TQVA 1VQNH 1YJWH 4WFAJ 3C2RA 1K8AJ 5GAHN 1FM0E 1Y69K 3I56H 1QVGH 1YI2H 1N5WB 4KWWA 5HULA 1WYGA 3SR6C 3G6EH 3CCJH 3CCVH 1QVFH 4WCEJ 1VLBA 2W3RB 5AYZA 1VDVA 1FO4A 1YIJH 2WK5A 1VQMH 4EADA 5DM6J 2W3SB 3VMMA 2WK6A 1VQ7H 1YJ9H 3CF5J 1Q7YJ 2OTLH 1YTDA 2B7QA 3WO0A 3CPWH 3NVYC 5DM7J 5GADN 3G71H 1M90J 1OTPA 1FIQC 2OMDA 4ZOHA 1DGJA 3WO1A 5MLCO 3CC2H 3CCQH 3EUB4 1N62B 2Q5WE 5EY3A 1VQ8H 3FC4A 1S72H 1YJNH 1JROB 1Q81J 5MPOC 4YEKA 1VQ5H 3PAJA 1UOUA 3C2EA 1KQSH 1VQ9H 2ZJRJ 3AM9A 4USAA 1YTEA 1VQKH 4YYYA 3I55H 1VQLH 5JVGJ 1V97A 4AP8A 3C2FA 4XR5A 2QA4H 1YHQH 3CCRH 1VQPH 4X46A 3CC7H 3PIPJ 2DSJA 1N60B 1QPQA 2QIEA 3AN1A 3CCUH 5HUPA 3CMAH 2ZJPJ 2PA2A 3H5QA 2OTJH 1SB3A 3CCLH 3CMEH 4IOAJ 1NVJA 2B7NA 4US8A 4WFBJ 4U67J 1VQ4H 4UY8M 4WFNJ 1VQ6H 4GA5A 1RM6A 2W55B 3C2VA 4EAFA 1KC8J 1KD1J 4US9A 2QEXH 3AMZA 3ETRC 3RPFA 4KWVA 1N5XA 2W54B 3BIIE 1FFUB 1QPNA 3GNNA 5JVHJ 1NJIJ 3NVVC 2I14A 2I1OA 4GA6A 1NVIE 2JBMA 1N61B 3CCEH 3NS1C 3NVWC 1QAPA 1QPRA 1VQOH 5H1SO 1ZXIB 2B7PA 3CCSH 3J7ZM 4C7ZA 3C2OA 5AN9F 1BRWA 1WKIA 2J0FA 3CD6H 3PIOJ 1K9MJ 3B9JC 4GA4A 4IO9J 2E3TA 3CXCH 1YITH 1JJ2H 1QPOA 4LHMA 1W2BH 5HL7J 1JRPB 3NRZC 5AYYA 3G4SH 5HUOA 3WNZA 3OW2H 1YTKA 4C7YA 1FMAE 2ZJQJ 1X1OA 4IOCJ 3L4PA 1N8RJ 1N63B 5GAEN 3CCMH 2TPTA 5GAGN 3DLLJ 1K73J 3NVZC 1SIJA 1Q86J 4I9AA 2WP4A 3L0GA 5AYXA 4C80A 1FFVB 1Q82J 3FAHA 4WF9J
chains in the Genus database with same CATH topology
5MPOC 4AP8A 2QIEA 1FMAE 2Q5WE 2WP4A 3BIIE 3RPFA 1NVJA 1NVIE 1FM0E 2OMDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5MPO C;  4AP8 A;  2QIE A;  1FMA E;  2Q5W E;  2WP4 A;  3BII E;  3RPF A;  1NVJ A;  1NVI E;  1FM0 E;  2OMD A; 
#chains in the Genus database with same CATH topology
 3CC4 H;  1AZY A;  1M1K J;  5EP8 A;  1O4U A;  3TQV A;  1VQN H;  1YJW H;  4WFA J;  3C2R A;  1K8A J;  5GAH N;  1FM0 E;  1Y69 K;  3I56 H;  1QVG H;  1YI2 H;  1N5W B;  4KWW A;  5HUL A;  1WYG A;  3SR6 C;  3G6E H;  3CCJ H;  3CCV H;  1QVF H;  4WCE J;  1VLB A;  2W3R B;  5AYZ A;  1VDV A;  1FO4 A;  1YIJ H;  2WK5 A;  1VQM H;  4EAD A;  5DM6 J;  2W3S B;  3VMM A;  2WK6 A;  1VQ7 H;  1YJ9 H;  3CF5 J;  1Q7Y J;  2OTL H;  1YTD A;  2B7Q A;  3WO0 A;  3CPW H;  3NVY C;  5DM7 J;  5GAD N;  3G71 H;  1M90 J;  1OTP A;  1FIQ C;  2OMD A;  4ZOH A;  1DGJ A;  3WO1 A;  5MLC O;  3CC2 H;  3CCQ H;  3EUB 4;  1N62 B;  2Q5W E;  5EY3 A;  1VQ8 H;  3FC4 A;  1S72 H;  1YJN H;  1JRO B;  1Q81 J;  5MPO C;  4YEK A;  1VQ5 H;  3PAJ A;  1UOU A;  3C2E A;  1KQS H;  1VQ9 H;  2ZJR J;  3AM9 A;  4USA A;  1YTE A;  1VQK H;  4YYY A;  3I55 H;  1VQL H;  5JVG J;  1V97 A;  4AP8 A;  3C2F A;  4XR5 A;  2QA4 H;  1YHQ H;  3CCR H;  1VQP H;  4X46 A;  3CC7 H;  3PIP J;  2DSJ A;  1N60 B;  1QPQ A;  2QIE A;  3AN1 A;  3CCU H;  5HUP A;  3CMA H;  2ZJP J;  2PA2 A;  3H5Q A;  2OTJ H;  1SB3 A;  3CCL H;  3CME H;  4IOA J;  1NVJ A;  2B7N A;  4US8 A;  4WFB J;  4U67 J;  1VQ4 H;  4UY8 M;  4WFN J;  1VQ6 H;  4GA5 A;  1RM6 A;  2W55 B;  3C2V A;  4EAF A;  1KC8 J;  1KD1 J;  4US9 A;  2QEX H;  3AMZ A;  3ETR C;  3RPF A;  4KWV A;  1N5X A;  2W54 B;  3BII E;  1FFU B;  1QPN A;  3GNN A;  5JVH J;  1NJI J;  3NVV C;  2I14 A;  2I1O A;  4GA6 A;  1NVI E;  2JBM A;  1N61 B;  3CCE H;  3NS1 C;  3NVW C;  1QAP A;  1QPR A;  1VQO H;  5H1S O;  1ZXI B;  2B7P A;  3CCS H;  3J7Z M;  4C7Z A;  3C2O A;  5AN9 F;  1BRW A;  1WKI A;  2J0F A;  3CD6 H;  3PIO J;  1K9M J;  3B9J C;  4GA4 A;  4IO9 J;  2E3T A;  3CXC H;  1YIT H;  1JJ2 H;  1QPO A;  4LHM A;  1W2B H;  5HL7 J;  1JRP B;  3NRZ C;  5AYY A;  3G4S H;  5HUO A;  3WNZ A;  3OW2 H;  1YTK A;  4C7Y A;  1FMA E;  2ZJQ J;  1X1O A;  4IOC J;  3L4P A;  1N8R J;  1N63 B;  5GAE N;  3CCM H;  2TPT A;  5GAG N;  3DLL J;  1K73 J;  3NVZ C;  1SIJ A;  1Q86 J;  4I9A A;  2WP4 A;  3L0G A;  5AYX A;  4C80 A;  1FFV B;  1Q82 J;  3FAH A;  4WF9 J; 
#chains in the Genus database with same CATH homology
 5MPO C;  4AP8 A;  2QIE A;  1FMA E;  2Q5W E;  2WP4 A;  3BII E;  3RPF A;  1NVJ A;  1NVI E;  1FM0 E;  2OMD A; 
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#similar chains, but unknotted
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