4AP8A

Crystal structure of human molybdopterin synthase catalytic subunit (mocs2b)
Total Genus 42
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
42
sequence length
134
structure length
134
Chain Sequence
EVEEKSKDVINFTAEKLSVDEVSQLVISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWPVKHIAVFHRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYE
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal Structure of Human Molybdopterin Synthase Catalytic Subunit (Mocs2B)
rcsb
molecule tags Transferase
source organism Homo sapiens
molecule keywords MOLYBDOPTERIN SYNTHASE CATALYTIC SUBUNIT
total genus 42
structure length 134
sequence length 134
chains with identical sequence B, C, D
ec nomenclature ec 2.8.1.12: Molybdopterin synthase.
pdb deposition date 2012-03-30

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02391 MoaE MoaE protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1170.40 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3 Molybdopterin biosynthesis MoaE subunit 4ap8A00
2Q5WE 1FM0E 3BIIE 3RPFA 1NVJA 2WP4A 1NVIE 5MPOC 1FMAE 4AP8A 2QIEA 2OMDA
chains in the Genus database with same CATH superfamily
2B7QA 1WYGA 5HUOA 1JROB 1QPQA 4KWWA 3PAJA 4ZOHA 1WKIA 2OTLH 1FMAE 3SR6C 1KC8J 2I1OA 2B7NA 1N63B 1YTEA 3NVZC 3C2VA 3CCVH 1Q7YJ 3RPFA 1AZYA 4C7ZA 1Q82J 5MLCO 2PA2A 1YJWH 1FO4A 3C2OA 3FC4A 1JJ2H 1YITH 1VQ7H 1K8AJ 1VLBA 3CCUH 1K73J 1VQ9H 2WK6A 3WO1A 4US9A 4X46A 4YYYA 5AYZA 4US8A 5DM6J 1K9MJ 5DM7J 1NVIE 1QVGH 3I55H 3G4SH 3CD6H 3C2RA 1QAPA 4USAA 3OW2H 1YJ9H 2ZJRJ 4C7YA 5JVHJ 1N62B 1FIQC 1N5WB 1RM6A 4IO9J 1YIJH 5HUPA 1YHQH 4AP8A 2QIEA 1KD1J 2W54B 2TPTA 4I9AA 3I56H 3CXCH 3CPWH 1ZXIB 2I14A 3AM9A 1M1KJ 1JRPB 4EAFA 1VQNH 4IOCJ 1VQMH 3WO0A 1N60B 1NJIJ 1YJNH 3CCLH 1M90J 4WFNJ 5HL7J 1FFVB 3CMAH 1O4UA 2OMDA 1VQPH 4KWVA 2ZJQJ 3NVYC 1N5XA 2QA4H 4EADA 3CCMH 1YI2H 3CCJH 1YTDA 1W2BH 3G71H 3PIOJ 1N61B 1S72H 1FFUB 1UOUA 2W3RB 3AN1A 5EY3A 2OTJH 4C80A 3L4PA 3C2FA 3DLLJ 1VQLH 1SB3A 1FM0E 3H5QA 4GA6A 3CMEH 2J0FA 4XR5A 1DGJA 3VMMA 1SIJA 4GA5A 1QPRA 1KQSH 3J7ZM 3FAHA 1VQ6H 4WFBJ 4GA4A 2DSJA 3NRZC 3TQVA 5JVGJ 1Q86J 1YTKA 5AYXA 1QVFH 3WNZA 3L0GA 3EUB4 2WP4A 1Y69K 1V97A 3CC2H 4YEKA 3C2EA 1QPNA 1VQKH 1VQ8H 3NS1C 2JBMA 4UY8M 5MPOC 2W55B 2WK5A 3CCEH 1VQ4H 3B9JC 5AYYA 1BRWA 4WF9J 3BIIE 3GNNA 3CC7H 5HULA 5GAGN 4U67J 5GADN 2ZJPJ 1N8RJ 4WFAJ 1VQ5H 1NVJA 3G6EH 2E3TA 5GAHN 3CCQH 2QEXH 5EP8A 4WCEJ 2W3SB 1OTPA 5AN9F 5GAEN 2B7PA 2Q5WE 1X1OA 3CCRH 3CCSH 1QPOA 4IOAJ 1VQOH 1Q81J 4LHMA 3NVVC 3CF5J 3NVWC 3AMZA 5H1SO 1VDVA 3ETRC 3PIPJ 3CC4H
chains in the Genus database with same CATH topology
2Q5WE 1FM0E 3BIIE 3RPFA 1NVJA 2WP4A 1NVIE 5MPOC 1FMAE 4AP8A 2QIEA 2OMDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Q5W E;  1FM0 E;  3BII E;  3RPF A;  1NVJ A;  2WP4 A;  1NVI E;  5MPO C;  1FMA E;  4AP8 A;  2QIE A;  2OMD A; 
#chains in the Genus database with same CATH topology
 2B7Q A;  1WYG A;  5HUO A;  1JRO B;  1QPQ A;  4KWW A;  3PAJ A;  4ZOH A;  1WKI A;  2OTL H;  1FMA E;  3SR6 C;  1KC8 J;  2I1O A;  2B7N A;  1N63 B;  1YTE A;  3NVZ C;  3C2V A;  3CCV H;  1Q7Y J;  3RPF A;  1AZY A;  4C7Z A;  1Q82 J;  5MLC O;  2PA2 A;  1YJW H;  1FO4 A;  3C2O A;  3FC4 A;  1JJ2 H;  1YIT H;  1VQ7 H;  1K8A J;  1VLB A;  3CCU H;  1K73 J;  1VQ9 H;  2WK6 A;  3WO1 A;  4US9 A;  4X46 A;  4YYY A;  5AYZ A;  4US8 A;  5DM6 J;  1K9M J;  5DM7 J;  1NVI E;  1QVG H;  3I55 H;  3G4S H;  3CD6 H;  3C2R A;  1QAP A;  4USA A;  3OW2 H;  1YJ9 H;  2ZJR J;  4C7Y A;  5JVH J;  1N62 B;  1FIQ C;  1N5W B;  1RM6 A;  4IO9 J;  1YIJ H;  5HUP A;  1YHQ H;  4AP8 A;  2QIE A;  1KD1 J;  2W54 B;  2TPT A;  4I9A A;  3I56 H;  3CXC H;  3CPW H;  1ZXI B;  2I14 A;  3AM9 A;  1M1K J;  1JRP B;  4EAF A;  1VQN H;  4IOC J;  1VQM H;  3WO0 A;  1N60 B;  1NJI J;  1YJN H;  3CCL H;  1M90 J;  4WFN J;  5HL7 J;  1FFV B;  3CMA H;  1O4U A;  2OMD A;  1VQP H;  4KWV A;  2ZJQ J;  3NVY C;  1N5X A;  2QA4 H;  4EAD A;  3CCM H;  1YI2 H;  3CCJ H;  1YTD A;  1W2B H;  3G71 H;  3PIO J;  1N61 B;  1S72 H;  1FFU B;  1UOU A;  2W3R B;  3AN1 A;  5EY3 A;  2OTJ H;  4C80 A;  3L4P A;  3C2F A;  3DLL J;  1VQL H;  1SB3 A;  1FM0 E;  3H5Q A;  4GA6 A;  3CME H;  2J0F A;  4XR5 A;  1DGJ A;  3VMM A;  1SIJ A;  4GA5 A;  1QPR A;  1KQS H;  3J7Z M;  3FAH A;  1VQ6 H;  4WFB J;  4GA4 A;  2DSJ A;  3NRZ C;  3TQV A;  5JVG J;  1Q86 J;  1YTK A;  5AYX A;  1QVF H;  3WNZ A;  3L0G A;  3EUB 4;  2WP4 A;  1Y69 K;  1V97 A;  3CC2 H;  4YEK A;  3C2E A;  1QPN A;  1VQK H;  1VQ8 H;  3NS1 C;  2JBM A;  4UY8 M;  5MPO C;  2W55 B;  2WK5 A;  3CCE H;  1VQ4 H;  3B9J C;  5AYY A;  1BRW A;  4WF9 J;  3BII E;  3GNN A;  3CC7 H;  5HUL A;  5GAG N;  4U67 J;  5GAD N;  2ZJP J;  1N8R J;  4WFA J;  1VQ5 H;  1NVJ A;  3G6E H;  2E3T A;  5GAH N;  3CCQ H;  2QEX H;  5EP8 A;  4WCE J;  2W3S B;  1OTP A;  5AN9 F;  5GAE N;  2B7P A;  2Q5W E;  1X1O A;  3CCR H;  3CCS H;  1QPO A;  4IOA J;  1VQO H;  1Q81 J;  4LHM A;  3NVV C;  3CF5 J;  3NVW C;  3AMZ A;  5H1S O;  1VDV A;  3ETR C;  3PIP J;  3CC4 H; 
#chains in the Genus database with same CATH homology
 2Q5W E;  1FM0 E;  3BII E;  3RPF A;  1NVJ A;  2WP4 A;  1NVI E;  5MPO C;  1FMA E;  4AP8 A;  2QIE A;  2OMD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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