5MPOC

Crystal structure of human molybdopterin synthase complex
Total Genus 38

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
132
structure length
132
Chain Sequence
EEKSKDVINFTAEKLSVDEVSQLVISPLCGAISLFVGTTRNNFEGKKVISLEYEAYLPMAENEVRKICSDIRQKWPVKHIAVFHRLGLVPVSEASIIIAVSSAHRAASLEAVSYAIDTLKAKVPIWKKEIYE

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
S1 (44-50)S7 (132-141)S4 (85-94)AH1 (56-63)S5 (116-124)EMPTYAH2 (97-113)S3 (81-82)TIV1 (81-84)TII1 (129-132)S6 (126-129)TI1 (65-68)S2 (70-78)O1 (114-116)Updating...
connected with : NaN
molecule tags Transferase
source organism Homo sapiens
publication title Crystal structure of human molybdopterin synthase complex
rcsb
molecule keywords Molybdopterin synthase sulfur carrier subunit
total genus 38
structure length 132
sequence length 132
chains with identical sequence D
ec nomenclature ec 2.8.1.12: Molybdopterin synthase.
pdb deposition date 2016-12-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
C PF02391 MoaE MoaE protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.1170.40 Alpha Beta Alpha-Beta Complex Aldehyde Oxidoreductase; domain 3 Molybdopterin biosynthesis MoaE subunit 5mpoC00
3BIIE 1NVIE 1FM0E 1FMAE 1NVJA 2WP4A 4AP8A 2OMDA 2QIEA 2Q5WE 3RPFA 5MPOC
chains in the Genus database with same CATH superfamily
2E3TA 4WFNJ 1QPQA 3I55H 3CCQH 1N60B 5DM7J 2OTLH 1FFUB 2B7PA 1JJ2H 4I9AA 3B9JC 1WKIA 3CCJH 3NVVC 5EP8A 3TQVA 1YJNH 3CCVH 2W3SB 1O4UA 4GA5A 3WO1A 4US8A 2PA2A 3C2OA 3NRZC 5GAHN 1QAPA 3PAJA 5HULA 3WO0A 4WCEJ 3CCSH 1VQKH 5MLCO 4AP8A 2I1OA 1YJWH 3J7ZM 2ZJRJ 1OTPA 1VQ5H 5HUPA 1FFVB 5AYZA 3G6EH 5AN9F 2QA4H 4EAFA 2WP4A 5GAEN 1BRWA 3CC7H 1VQPH 2QIEA 1K73J 3RPFA 3C2EA 1Q86J 1K9MJ 2I14A 1JROB 4WFBJ 2ZJPJ 5HL7J 2OTJH 3FC4A 4US9A 3C2RA 3NVWC 1N8RJ 3PIOJ 4C7ZA 3CCEH 1N61B 1SIJA 3L0GA 5GAGN 1YI2H 4KWVA 5AYYA 1QPNA 2W55B 2W54B 1FO4A 4IO9J 3CMAH 1Q7YJ 1N63B 1VQ7H 1N5WB 4ZOHA 1M1KJ 3OW2H 3CMEH 2OMDA 1X1OA 3G4SH 1VQNH 3EUB4 4GA4A 5GADN 1VQLH 3ETRC 1QPRA 5H1SO 1Q81J 1FMAE 1KD1J 4YEKA 1YHQH 1QVFH 3CPWH 4IOCJ 1Y69K 3NVYC 3H5QA 4EADA 1QVGH 4USAA 1RM6A 5HUOA 1SB3A 5EY3A 1UOUA 1VLBA 4U67J 2WK5A 4YYYA 1N62B 3PIPJ 1N5XA 3G71H 1VQ4H 3NVZC 3CXCH 4C80A 2J0FA 3BIIE 3CCUH 1FIQC 1AZYA 1KC8J 4LHMA 1K8AJ 2DSJA 3FAHA 3CC4H 1DGJA 4WFAJ 4UY8M 2JBMA 4IOAJ 5MPOC 2B7QA 3CF5J 3AM9A 1YJ9H 1FM0E 1V97A 4C7YA 2W3RB 1Q82J 3DLLJ 1VQ6H 1S72H 3VMMA 1VQOH 2ZJQJ 3AMZA 1JRPB 1ZXIB 1NVJA 3NS1C 1VQ8H 5JVHJ 3SR6C 1VQMH 1WYGA 3CCMH 1VQ9H 4GA6A 3L4PA 1NJIJ 5AYXA 4KWWA 3CCRH 3CCLH 2QEXH 4XR5A 1YIJH 3C2VA 1M90J 1KQSH 1QPOA 3CC2H 1YTEA 3GNNA 1YTKA 3C2FA 4WF9J 1YITH 2B7NA 5JVGJ 5DM6J 3WNZA 3I56H 3AN1A 1NVIE 1VDVA 2TPTA 4X46A 2WK6A 1W2BH 2Q5WE 1YTDA 3CD6H
chains in the Genus database with same CATH topology
3BIIE 1NVIE 1FM0E 1FMAE 1NVJA 2WP4A 4AP8A 2OMDA 2QIEA 2Q5WE 3RPFA 5MPOC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3BII E;  1NVI E;  1FM0 E;  1FMA E;  1NVJ A;  2WP4 A;  4AP8 A;  2OMD A;  2QIE A;  2Q5W E;  3RPF A;  5MPO C; 
#chains in the Genus database with same CATH topology
 2E3T A;  4WFN J;  1QPQ A;  3I55 H;  3CCQ H;  1N60 B;  5DM7 J;  2OTL H;  1FFU B;  2B7P A;  1JJ2 H;  4I9A A;  3B9J C;  1WKI A;  3CCJ H;  3NVV C;  5EP8 A;  3TQV A;  1YJN H;  3CCV H;  2W3S B;  1O4U A;  4GA5 A;  3WO1 A;  4US8 A;  2PA2 A;  3C2O A;  3NRZ C;  5GAH N;  1QAP A;  3PAJ A;  5HUL A;  3WO0 A;  4WCE J;  3CCS H;  1VQK H;  5MLC O;  4AP8 A;  2I1O A;  1YJW H;  3J7Z M;  2ZJR J;  1OTP A;  1VQ5 H;  5HUP A;  1FFV B;  5AYZ A;  3G6E H;  5AN9 F;  2QA4 H;  4EAF A;  2WP4 A;  5GAE N;  1BRW A;  3CC7 H;  1VQP H;  2QIE A;  1K73 J;  3RPF A;  3C2E A;  1Q86 J;  1K9M J;  2I14 A;  1JRO B;  4WFB J;  2ZJP J;  5HL7 J;  2OTJ H;  3FC4 A;  4US9 A;  3C2R A;  3NVW C;  1N8R J;  3PIO J;  4C7Z A;  3CCE H;  1N61 B;  1SIJ A;  3L0G A;  5GAG N;  1YI2 H;  4KWV A;  5AYY A;  1QPN A;  2W55 B;  2W54 B;  1FO4 A;  4IO9 J;  3CMA H;  1Q7Y J;  1N63 B;  1VQ7 H;  1N5W B;  4ZOH A;  1M1K J;  3OW2 H;  3CME H;  2OMD A;  1X1O A;  3G4S H;  1VQN H;  3EUB 4;  4GA4 A;  5GAD N;  1VQL H;  3ETR C;  1QPR A;  5H1S O;  1Q81 J;  1FMA E;  1KD1 J;  4YEK A;  1YHQ H;  1QVF H;  3CPW H;  4IOC J;  1Y69 K;  3NVY C;  3H5Q A;  4EAD A;  1QVG H;  4USA A;  1RM6 A;  5HUO A;  1SB3 A;  5EY3 A;  1UOU A;  1VLB A;  4U67 J;  2WK5 A;  4YYY A;  1N62 B;  3PIP J;  1N5X A;  3G71 H;  1VQ4 H;  3NVZ C;  3CXC H;  4C80 A;  2J0F A;  3BII E;  3CCU H;  1FIQ C;  1AZY A;  1KC8 J;  4LHM A;  1K8A J;  2DSJ A;  3FAH A;  3CC4 H;  1DGJ A;  4WFA J;  4UY8 M;  2JBM A;  4IOA J;  5MPO C;  2B7Q A;  3CF5 J;  3AM9 A;  1YJ9 H;  1FM0 E;  1V97 A;  4C7Y A;  2W3R B;  1Q82 J;  3DLL J;  1VQ6 H;  1S72 H;  3VMM A;  1VQO H;  2ZJQ J;  3AMZ A;  1JRP B;  1ZXI B;  1NVJ A;  3NS1 C;  1VQ8 H;  5JVH J;  3SR6 C;  1VQM H;  1WYG A;  3CCM H;  1VQ9 H;  4GA6 A;  3L4P A;  1NJI J;  5AYX A;  4KWW A;  3CCR H;  3CCL H;  2QEX H;  4XR5 A;  1YIJ H;  3C2V A;  1M90 J;  1KQS H;  1QPO A;  3CC2 H;  1YTE A;  3GNN A;  1YTK A;  3C2F A;  4WF9 J;  1YIT H;  2B7N A;  5JVG J;  5DM6 J;  3WNZ A;  3I56 H;  3AN1 A;  1NVI E;  1VDV A;  2TPT A;  4X46 A;  2WK6 A;  1W2B H;  2Q5W E;  1YTD A;  3CD6 H; 
#chains in the Genus database with same CATH homology
 3BII E;  1NVI E;  1FM0 E;  1FMA E;  1NVJ A;  2WP4 A;  4AP8 A;  2OMD A;  2QIE A;  2Q5W E;  3RPF A;  5MPO C; 
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similar chains in the pdb database (?% sequence similarity)

 
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