1EACA

Atomic structure of the cubic core of the pyruvate dehydrogenase multienzyme complex
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
243
structure length
243
Chain Sequence
IPPIPPVDFAKYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAKKAGVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRAILL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Dihydrolipoamide acetyltransferase
source organism Azotobacter vinelandii
publication title Crystallographic analysis of substrate binding and catalysis in dihydrolipoyl transacetylase (E2p).
pubmed doi rcsb
molecule keywords DIHYDROLIPOYL-TRANSACETYLASE
total genus 67
structure length 243
sequence length 243
ec nomenclature ec 2.3.1.12: Dihydrolipoyllysine-residue acetyltransferase.
pdb deposition date 1992-12-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00198 2-oxoacid_dh 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 1eacA00
5KJVA 5FALA 3B30A 3L60A 2XR7A 3B2SA 1C4TA 5FANA 3U9BA 5KJWA 2ZBAA 3FOTA 5T3EA 1L5AA 5DU9A 1DPDA 1CLAA 1EABA 1XL7A 1E2OA 5DUAA 1EAAA 3FP0A 1EADA 1PD5A 4JN3A 5KJTA 1CIAA 2RKVA 3CLAA 1DPBA 1QCAA 2II5A 1EAEA 3MAEA 4G0BA 4JN5A 2BGHA 4KECA 3U9FA 1XL8A 2I9DA 2II3A 4CLAA 2E1UA 1XMDA 2CLAA 2E1VA 1Q23A 4HVMA 4KE4A 1EAFA 4G2MA 5KJUA 2IHWA 1DPCA 2RKTA 5KJSA 1NOCB 1XMCA 4G22A 2JGPA 2E1TA 2VSQA 1EACA 1Q9JA 2II4A 4N72A 2XHGA 1SCZA
chains in the Genus database with same CATH superfamily
4EYWA 3B30A 3L60A 1Q6XA 2XR7A 3B2SA 5FANA 2ZBAA 5DUAA 1NDIA 2DEBA 1DPBA 1S5OA 4JN5A 3U9FA 2II3A 2E1UA 4KE4A 4G2MA 1DPCA 5KJSA 2II4A 1T1UA 3FP0A 5FALA 1T7NA 2FYOA 3U9BA 2H4TA 1NDBA 1CLAA 1EABA 1E2OA 1CIAA 4KECA 2BGHA 1XL8A 2FW3A 2FY2A 2RKTA 1NOCB 1XMCA 2FY5A 1EACA 4N72A 1XMDA 5KJVA 1NM8A 1T7QA 3FOTA 5T3EA 5DU9A 1DPDA 1EAAA 1EADA 1PD5A 4JN3A 2FY3A 1QCAA 2II5A 3MAEA 1T7OA 2E1VA 2CLAA 4HVMA 2IHWA 4G22A 2JGPA 2E1TA 2FY4A 2VSQA 1Q9JA 2RCUA 2XHGA 1SCZA 4EP9A 1C4TA 1L5AA 4EPHA 2H3WA 2H3PA 1XL7A 5KJTA 2RKVA 3CLAA 4G0BA 1EAEA 2H3UA 2I9DA 4CLAA 1Q23A 5KJUA 1EAFA 1NDFA 5KJWA
chains in the Genus database with same CATH topology
5KJVA 5FALA 3B30A 3L60A 2XR7A 3B2SA 1C4TA 5FANA 3U9BA 5KJWA 2ZBAA 3FOTA 5T3EA 1L5AA 5DU9A 1DPDA 1CLAA 1EABA 1XL7A 1E2OA 5DUAA 1EAAA 3FP0A 1EADA 1PD5A 4JN3A 5KJTA 1CIAA 2RKVA 3CLAA 1DPBA 1QCAA 2II5A 1EAEA 3MAEA 4G0BA 4JN5A 2BGHA 4KECA 3U9FA 1XL8A 2I9DA 2II3A 4CLAA 2E1UA 1XMDA 2CLAA 2E1VA 1Q23A 4HVMA 4KE4A 1EAFA 4G2MA 5KJUA 2IHWA 1DPCA 2RKTA 5KJSA 1NOCB 1XMCA 4G22A 2JGPA 2E1TA 2VSQA 1EACA 1Q9JA 2II4A 4N72A 2XHGA 1SCZA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5KJV A;  5FAL A;  3B30 A;  3L60 A;  2XR7 A;  3B2S A;  1C4T A;  5FAN A;  3U9B A;  5KJW A;  2ZBA A;  3FOT A;  5T3E A;  1L5A A;  5DU9 A;  1DPD A;  1CLA A;  1EAB A;  1XL7 A;  1E2O A;  5DUA A;  1EAA A;  3FP0 A;  1EAD A;  1PD5 A;  4JN3 A;  5KJT A;  1CIA A;  2RKV A;  3CLA A;  1DPB A;  1QCA A;  2II5 A;  1EAE A;  3MAE A;  4G0B A;  4JN5 A;  2BGH A;  4KEC A;  3U9F A;  1XL8 A;  2I9D A;  2II3 A;  4CLA A;  2E1U A;  1XMD A;  2CLA A;  2E1V A;  1Q23 A;  4HVM A;  4KE4 A;  1EAF A;  4G2M A;  5KJU A;  2IHW A;  1DPC A;  2RKT A;  5KJS A;  1NOC B;  1XMC A;  4G22 A;  2JGP A;  2E1T A;  2VSQ A;  1EAC A;  1Q9J A;  2II4 A;  4N72 A;  2XHG A;  1SCZ A; 
#chains in the Genus database with same CATH topology
 4EYW A;  3B30 A;  3L60 A;  1Q6X A;  2XR7 A;  3B2S A;  5FAN A;  2ZBA A;  5DUA A;  1NDI A;  2DEB A;  1DPB A;  1S5O A;  4JN5 A;  3U9F A;  2II3 A;  2E1U A;  4KE4 A;  4G2M A;  1DPC A;  5KJS A;  2II4 A;  1T1U A;  3FP0 A;  5FAL A;  1T7N A;  2FYO A;  3U9B A;  2H4T A;  1NDB A;  1CLA A;  1EAB A;  1E2O A;  1CIA A;  4KEC A;  2BGH A;  1XL8 A;  2FW3 A;  2FY2 A;  2RKT A;  1NOC B;  1XMC A;  2FY5 A;  1EAC A;  4N72 A;  1XMD A;  5KJV A;  1NM8 A;  1T7Q A;  3FOT A;  5T3E A;  5DU9 A;  1DPD A;  1EAA A;  1EAD A;  1PD5 A;  4JN3 A;  2FY3 A;  1QCA A;  2II5 A;  3MAE A;  1T7O A;  2E1V A;  2CLA A;  4HVM A;  2IHW A;  4G22 A;  2JGP A;  2E1T A;  2FY4 A;  2VSQ A;  1Q9J A;  2RCU A;  2XHG A;  1SCZ A;  4EP9 A;  1C4T A;  1L5A A;  4EPH A;  2H3W A;  2H3P A;  1XL7 A;  5KJT A;  2RKV A;  3CLA A;  4G0B A;  1EAE A;  2H3U A;  2I9D A;  4CLA A;  1Q23 A;  5KJU A;  1EAF A;  1NDF A;  5KJW A; 
#chains in the Genus database with same CATH homology
 5KJV A;  5FAL A;  3B30 A;  3L60 A;  2XR7 A;  3B2S A;  1C4T A;  5FAN A;  3U9B A;  5KJW A;  2ZBA A;  3FOT A;  5T3E A;  1L5A A;  5DU9 A;  1DPD A;  1CLA A;  1EAB A;  1XL7 A;  1E2O A;  5DUA A;  1EAA A;  3FP0 A;  1EAD A;  1PD5 A;  4JN3 A;  5KJT A;  1CIA A;  2RKV A;  3CLA A;  1DPB A;  1QCA A;  2II5 A;  1EAE A;  3MAE A;  4G0B A;  4JN5 A;  2BGH A;  4KEC A;  3U9F A;  1XL8 A;  2I9D A;  2II3 A;  4CLA A;  2E1U A;  1XMD A;  2CLA A;  2E1V A;  1Q23 A;  4HVM A;  4KE4 A;  1EAF A;  4G2M A;  5KJU A;  2IHW A;  1DPC A;  2RKT A;  5KJS A;  1NOC B;  1XMC A;  4G22 A;  2JGP A;  2E1T A;  2VSQ A;  1EAC A;  1Q9J A;  2II4 A;  4N72 A;  2XHG A;  1SCZ A; 
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similar chains in the pdb database (?% sequence similarity)

 
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