1EACA

Atomic structure of the cubic core of the pyruvate dehydrogenase multienzyme complex
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
243
structure length
243
Chain Sequence
IPPIPPVDFAKYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAKKAGVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRAILL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords DIHYDROLIPOYL-TRANSACETYLASE
publication title Crystallographic analysis of substrate binding and catalysis in dihydrolipoyl transacetylase (E2p).
pubmed doi rcsb
source organism Azotobacter vinelandii
molecule tags Dihydrolipoamide acetyltransferase
total genus 67
structure length 243
sequence length 243
ec nomenclature ec 2.3.1.12: Dihydrolipoyllysine-residue acetyltransferase.
pdb deposition date 1992-12-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00198 2-oxoacid_dh 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 1eacA00
1CIAA 3FOTA 5T3EA 2CLAA 4N72A 2E1UA 5KJSA 1QCAA 2I9DA 5DUAA 5KJVA 1DPDA 3MAEA 2IHWA 2RKVA 2VSQA 2ZBAA 4CLAA 3U9FA 5KJTA 3B2SA 4G2MA 1SCZA 5FALA 1EADA 5FANA 3CLAA 1L5AA 3U9BA 1DPBA 2II3A 1EAEA 1EACA 2E1VA 2XHGA 2XR7A 3FP0A 4HVMA 1XL8A 1Q23A 5DU9A 4G0BA 1CLAA 4KE4A 2BGHA 2E1TA 4KECA 1EABA 5KJUA 2II4A 1EAAA 2JGPA 1DPCA 1XMDA 5KJWA 4G22A 1EAFA 1C4TA 4JN5A 1Q9JA 1XMCA 2RKTA 1NOCB 1XL7A 1PD5A 2II5A 3B30A 3L60A 1E2OA 4JN3A
chains in the Genus database with same CATH superfamily
2FY3A 2I9DA 2FY2A 2RKVA 2VSQA 3B2SA 1SCZA 1NDIA 1L5AA 4HVMA 2XR7A 1CLAA 4KECA 1T7QA 4JN5A 1NOCB 1XL7A 1PD5A 4JN3A 2H3UA 4N72A 2E1UA 1QCAA 2FY5A 1Q6XA 2IHWA 5KJTA 4G2MA 3U9BA 1DPBA 2FY4A 1EACA 1T1UA 2E1VA 1S5OA 4KE4A 2BGHA 1EABA 1EAAA 2H4TA 1XMDA 1C4TA 2RCUA 1CIAA 5T3EA 1NDFA 5KJSA 4EPHA 5DUAA 1DPDA 5FALA 5FANA 3CLAA 1EAEA 2XHGA 1Q23A 2H3PA 2E1TA 2FYOA 2H3WA 1T7OA 5KJUA 1DPCA 5KJWA 1XMCA 2II5A 1NM8A 1E2OA 3FOTA 2CLAA 5KJVA 3MAEA 2ZBAA 4CLAA 3U9FA 2FW3A 1NDBA 1EADA 1T7NA 2DEBA 2II3A 3FP0A 1XL8A 5DU9A 4G0BA 2II4A 4EYWA 2JGPA 4G22A 1EAFA 1Q9JA 2RKTA 4EP9A 3B30A 3L60A
chains in the Genus database with same CATH topology
1CIAA 3FOTA 5T3EA 2CLAA 4N72A 2E1UA 5KJSA 1QCAA 2I9DA 5DUAA 5KJVA 1DPDA 3MAEA 2IHWA 2RKVA 2VSQA 2ZBAA 4CLAA 3U9FA 5KJTA 3B2SA 4G2MA 1SCZA 5FALA 1EADA 5FANA 3CLAA 1L5AA 3U9BA 1DPBA 2II3A 1EAEA 1EACA 2E1VA 2XHGA 2XR7A 3FP0A 4HVMA 1XL8A 1Q23A 5DU9A 4G0BA 1CLAA 4KE4A 2BGHA 2E1TA 4KECA 1EABA 5KJUA 2II4A 1EAAA 2JGPA 1DPCA 1XMDA 5KJWA 4G22A 1EAFA 1C4TA 4JN5A 1Q9JA 1XMCA 2RKTA 1NOCB 1XL7A 1PD5A 2II5A 3B30A 3L60A 1E2OA 4JN3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1CIA A;  3FOT A;  5T3E A;  2CLA A;  4N72 A;  2E1U A;  5KJS A;  1QCA A;  2I9D A;  5DUA A;  5KJV A;  1DPD A;  3MAE A;  2IHW A;  2RKV A;  2VSQ A;  2ZBA A;  4CLA A;  3U9F A;  5KJT A;  3B2S A;  4G2M A;  1SCZ A;  5FAL A;  1EAD A;  5FAN A;  3CLA A;  1L5A A;  3U9B A;  1DPB A;  2II3 A;  1EAE A;  1EAC A;  2E1V A;  2XHG A;  2XR7 A;  3FP0 A;  4HVM A;  1XL8 A;  1Q23 A;  5DU9 A;  4G0B A;  1CLA A;  4KE4 A;  2BGH A;  2E1T A;  4KEC A;  1EAB A;  5KJU A;  2II4 A;  1EAA A;  2JGP A;  1DPC A;  1XMD A;  5KJW A;  4G22 A;  1EAF A;  1C4T A;  4JN5 A;  1Q9J A;  1XMC A;  2RKT A;  1NOC B;  1XL7 A;  1PD5 A;  2II5 A;  3B30 A;  3L60 A;  1E2O A;  4JN3 A; 
#chains in the Genus database with same CATH topology
 2FY3 A;  2I9D A;  2FY2 A;  2RKV A;  2VSQ A;  3B2S A;  1SCZ A;  1NDI A;  1L5A A;  4HVM A;  2XR7 A;  1CLA A;  4KEC A;  1T7Q A;  4JN5 A;  1NOC B;  1XL7 A;  1PD5 A;  4JN3 A;  2H3U A;  4N72 A;  2E1U A;  1QCA A;  2FY5 A;  1Q6X A;  2IHW A;  5KJT A;  4G2M A;  3U9B A;  1DPB A;  2FY4 A;  1EAC A;  1T1U A;  2E1V A;  1S5O A;  4KE4 A;  2BGH A;  1EAB A;  1EAA A;  2H4T A;  1XMD A;  1C4T A;  2RCU A;  1CIA A;  5T3E A;  1NDF A;  5KJS A;  4EPH A;  5DUA A;  1DPD A;  5FAL A;  5FAN A;  3CLA A;  1EAE A;  2XHG A;  1Q23 A;  2H3P A;  2E1T A;  2FYO A;  2H3W A;  1T7O A;  5KJU A;  1DPC A;  5KJW A;  1XMC A;  2II5 A;  1NM8 A;  1E2O A;  3FOT A;  2CLA A;  5KJV A;  3MAE A;  2ZBA A;  4CLA A;  3U9F A;  2FW3 A;  1NDB A;  1EAD A;  1T7N A;  2DEB A;  2II3 A;  3FP0 A;  1XL8 A;  5DU9 A;  4G0B A;  2II4 A;  4EYW A;  2JGP A;  4G22 A;  1EAF A;  1Q9J A;  2RKT A;  4EP9 A;  3B30 A;  3L60 A; 
#chains in the Genus database with same CATH homology
 1CIA A;  3FOT A;  5T3E A;  2CLA A;  4N72 A;  2E1U A;  5KJS A;  1QCA A;  2I9D A;  5DUA A;  5KJV A;  1DPD A;  3MAE A;  2IHW A;  2RKV A;  2VSQ A;  2ZBA A;  4CLA A;  3U9F A;  5KJT A;  3B2S A;  4G2M A;  1SCZ A;  5FAL A;  1EAD A;  5FAN A;  3CLA A;  1L5A A;  3U9B A;  1DPB A;  2II3 A;  1EAE A;  1EAC A;  2E1V A;  2XHG A;  2XR7 A;  3FP0 A;  4HVM A;  1XL8 A;  1Q23 A;  5DU9 A;  4G0B A;  1CLA A;  4KE4 A;  2BGH A;  2E1T A;  4KEC A;  1EAB A;  5KJU A;  2II4 A;  1EAA A;  2JGP A;  1DPC A;  1XMD A;  5KJW A;  4G22 A;  1EAF A;  1C4T A;  4JN5 A;  1Q9J A;  1XMC A;  2RKT A;  1NOC B;  1XL7 A;  1PD5 A;  2II5 A;  3B30 A;  3L60 A;  1E2O A;  4JN3 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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