2RKTA

Crystal structure of apo f. graminearum tri101
Total Genus 141
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
141
sequence length
452
structure length
437
Chain Sequence
SMAFKIQLDTLGQLPGIYTQISLLYPVSDSSQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNFIKGGLILTVNGQHGAMDMVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGPVSASWAFFTFSPKAMSELKDAATKTLFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRAVDARPAMGVSNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSDPASMRQRTRGLATYLHNNPDKSNVSLTADADPSTSVMLSSWAKVGLWDYDFGLGLGKPETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKEWTKYAQYVG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule tags Transferase
molecule keywords Trichothecene 3-O-acetyltransferase
publication title Structural and Functional Characterization of the TRI101 Trichothecene 3-O-Acetyltransferase from Fusarium sporotrichioides and Fusarium graminearum: KINETIC INSIGHTS TO COMBATING FUSARIUM HEAD BLIGHT
pubmed doi rcsb
source organism Gibberella zeae
total genus 141
structure length 437
sequence length 452
ec nomenclature
pdb deposition date 2007-10-17

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 2rktA01
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 2rktA02
1QCAA 2BGHA 1XMDA 4KECA 4G2MA 1CLAA 3U9BA 3FP0A 5KJTA 1XMCA 1CIAA 2II4A 1DPBA 1Q9JA 3U9FA 1NOCB 4KE4A 1EAAA 1EABA 2XHGA 2XR7A 5FALA 1XL7A 4G22A 3B30A 5DU9A 5DUAA 1SCZA 4CLAA 4HVMA 1DPCA 2II5A 2E1UA 1EAFA 1EACA 4JN5A 5KJVA 5T3EA 2E1VA 1Q23A 3FOTA 1E2OA 2IHWA 2JGPA 3L60A 4N72A 3MAEA 1PD5A 1EADA 1L5AA 2II3A 2E1TA 5KJUA 5KJSA 5FANA 2ZBAA 1EAEA 4G0BA 2RKVA 4JN3A 5KJWA 2VSQA 1XL8A 2RKTA 1DPDA 3B2SA 3CLAA 2CLAA 2I9DA 1C4TA
chains in the Genus database with same CATH superfamily
1XMDA 3U9BA 1NOCB 4KE4A 5FALA 1XL7A 4G22A 2FW3A 1EACA 2H4TA 2IHWA 4EP9A 5FANA 4JN3A 1XL8A 3CLAA 1C4TA 1QCAA 2BGHA 5KJTA 2FYOA 3U9FA 1DPBA 1Q9JA 1EABA 2XR7A 5KJSA 1NDIA 2FY5A 4EYWA 1T1UA 1EAFA 1NDBA 2E1VA 2FY4A 1E2OA 3MAEA 5KJUA 1EADA 1T7NA 2FY3A 4EPHA 4KECA 1CLAA 2H3UA 1T7QA 1CIAA 1S5OA 3B30A 1SCZA 4HVMA 2H3WA 1Q6XA 5KJVA 5T3EA 1Q23A 2I9DA 3L60A 1NDFA 2E1TA 1EAEA 5KJWA 3B2SA 2CLAA 2FY2A 2DEBA 4G2MA 3FP0A 2H3PA 1XMCA 2II4A 1EAAA 2XHGA 5DU9A 4CLAA 5DUAA 1T7OA 1DPCA 2II5A 2RCUA 2E1UA 1NM8A 4JN5A 3FOTA 4N72A 1PD5A 1L5AA 2II3A 2ZBAA 4G0BA 2RKVA 2VSQA 2RKTA 1DPDA 2JGPA
chains in the Genus database with same CATH topology
1QCAA 2BGHA 1XMDA 4KECA 4G2MA 1CLAA 3U9BA 3FP0A 5KJTA 1XMCA 1CIAA 2II4A 1DPBA 1Q9JA 3U9FA 1NOCB 4KE4A 1EAAA 1EABA 2XHGA 2XR7A 5FALA 1XL7A 4G22A 3B30A 5DU9A 5DUAA 1SCZA 4CLAA 4HVMA 1DPCA 2II5A 2E1UA 1EAFA 1EACA 4JN5A 5KJVA 5T3EA 2E1VA 1Q23A 3FOTA 1E2OA 2IHWA 2JGPA 3L60A 4N72A 3MAEA 1PD5A 1EADA 1L5AA 2II3A 2E1TA 5KJUA 5KJSA 5FANA 2ZBAA 1EAEA 4G0BA 2RKVA 4JN3A 5KJWA 2VSQA 1XL8A 2RKTA 1DPDA 3B2SA 3CLAA 2CLAA 2I9DA 1C4TA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QCA A;  2BGH A;  1XMD A;  4KEC A;  4G2M A;  1CLA A;  3U9B A;  3FP0 A;  5KJT A;  1XMC A;  1CIA A;  2II4 A;  1DPB A;  1Q9J A;  3U9F A;  1NOC B;  4KE4 A;  1EAA A;  1EAB A;  2XHG A;  2XR7 A;  5FAL A;  1XL7 A;  4G22 A;  3B30 A;  5DU9 A;  5DUA A;  1SCZ A;  4CLA A;  4HVM A;  1DPC A;  2II5 A;  2E1U A;  1EAF A;  1EAC A;  4JN5 A;  5KJV A;  5T3E A;  2E1V A;  1Q23 A;  3FOT A;  1E2O A;  2IHW A;  2JGP A;  3L60 A;  4N72 A;  3MAE A;  1PD5 A;  1EAD A;  1L5A A;  2II3 A;  2E1T A;  5KJU A;  5KJS A;  5FAN A;  2ZBA A;  1EAE A;  4G0B A;  2RKV A;  4JN3 A;  5KJW A;  2VSQ A;  1XL8 A;  2RKT A;  1DPD A;  3B2S A;  3CLA A;  2CLA A;  2I9D A;  1C4T A; 
#chains in the Genus database with same CATH topology
 1XMD A;  3U9B A;  1NOC B;  4KE4 A;  5FAL A;  1XL7 A;  4G22 A;  2FW3 A;  1EAC A;  2H4T A;  2IHW A;  4EP9 A;  5FAN A;  4JN3 A;  1XL8 A;  3CLA A;  1C4T A;  1QCA A;  2BGH A;  5KJT A;  2FYO A;  3U9F A;  1DPB A;  1Q9J A;  1EAB A;  2XR7 A;  5KJS A;  1NDI A;  2FY5 A;  4EYW A;  1T1U A;  1EAF A;  1NDB A;  2E1V A;  2FY4 A;  1E2O A;  3MAE A;  5KJU A;  1EAD A;  1T7N A;  2FY3 A;  4EPH A;  4KEC A;  1CLA A;  2H3U A;  1T7Q A;  1CIA A;  1S5O A;  3B30 A;  1SCZ A;  4HVM A;  2H3W A;  1Q6X A;  5KJV A;  5T3E A;  1Q23 A;  2I9D A;  3L60 A;  1NDF A;  2E1T A;  1EAE A;  5KJW A;  3B2S A;  2CLA A;  2FY2 A;  2DEB A;  4G2M A;  3FP0 A;  2H3P A;  1XMC A;  2II4 A;  1EAA A;  2XHG A;  5DU9 A;  4CLA A;  5DUA A;  1T7O A;  1DPC A;  2II5 A;  2RCU A;  2E1U A;  1NM8 A;  4JN5 A;  3FOT A;  4N72 A;  1PD5 A;  1L5A A;  2II3 A;  2ZBA A;  4G0B A;  2RKV A;  2VSQ A;  2RKT A;  1DPD A;  2JGP A; 
#chains in the Genus database with same CATH homology
 1QCA A;  2BGH A;  1XMD A;  4KEC A;  4G2M A;  1CLA A;  3U9B A;  3FP0 A;  5KJT A;  1XMC A;  1CIA A;  2II4 A;  1DPB A;  1Q9J A;  3U9F A;  1NOC B;  4KE4 A;  1EAA A;  1EAB A;  2XHG A;  2XR7 A;  5FAL A;  1XL7 A;  4G22 A;  3B30 A;  5DU9 A;  5DUA A;  1SCZ A;  4CLA A;  4HVM A;  1DPC A;  2II5 A;  2E1U A;  1EAF A;  1EAC A;  4JN5 A;  5KJV A;  5T3E A;  2E1V A;  1Q23 A;  3FOT A;  1E2O A;  2IHW A;  2JGP A;  3L60 A;  4N72 A;  3MAE A;  1PD5 A;  1EAD A;  1L5A A;  2II3 A;  2E1T A;  5KJU A;  5KJS A;  5FAN A;  2ZBA A;  1EAE A;  4G0B A;  2RKV A;  4JN3 A;  5KJW A;  2VSQ A;  1XL8 A;  2RKT A;  1DPD A;  3B2S A;  3CLA A;  2CLA A;  2I9D A;  1C4T A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...