5KJSA

Crystal structure of arabidopsis thaliana hct
Total Genus 109
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
109
sequence length
433
structure length
429
Chain Sequence
b'MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPEVDHSTGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLFEI'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
pubmed doi rcsb
molecule keywords Shikimate O-hydroxycinnamoyltransferase
source organism Arabidopsis thaliana
molecule tags Transferase
total genus 109
structure length 429
sequence length 433
ec nomenclature ec 2.3.1.133: Shikimate O-hydroxycinnamoyltransferase.
pdb deposition date 2016-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjsA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjsA01
4CLAA 1SCZA 1DPDA 2XR7A 3B2SA 4JN5A 5FANA 4N72A 5KJSA 1XMCA 2CLAA 2II5A 4G2MA 1XL7A 2JGPA 5DU9A 5T3EA 5FALA 4JN3A 1C4TA 1EAAA 4G22A 2E1VA 3CLAA 1E2OA 2RKTA 2BGHA 2IHWA 3L60A 1EABA 3U9BA 5KJWA 1NOCB 1DPBA 2E1TA 2I9DA 2II4A 3FP0A 3B30A 1QCAA 1XL8A 3FOTA 4HVMA 2ZBAA 1CLAA 3U9FA 1DPCA 1L5AA 5KJTA 2VSQA 4G0BA 2RKVA 5DUAA 4KE4A 5KJUA 2XHGA 5KJVA 1CIAA 1EAFA 3MAEA 1EAEA 1XMDA 1Q9JA 2II3A 1PD5A 2E1UA 4KECA 1EADA 1EACA 1Q23A
chains in the Genus database with same CATH superfamily
2XR7A 5FANA 4G2MA 2FY2A 3CLAA 5KJWA 3U9BA 1T1UA 2E1TA 2II4A 2ZBAA 5KJTA 5DUAA 5KJVA 1EAFA 1PD5A 2E1UA 1T7QA 4CLAA 2H3UA 1DPDA 2FYOA 1XL7A 2RCUA 1NDFA 1E2OA 1EABA 1NM8A 1DPBA 1T7NA 1QCAA 3FOTA 3U9FA 1CLAA 2H3WA 2FW3A 3MAEA 1EAEA 1XMDA 2DEBA 1NDIA 1EADA 5DU9A 4EPHA 1SCZA 1T7OA 3B2SA 4JN5A 4N72A 1XMCA 2CLAA 4JN3A 1C4TA 1EAAA 2H4TA 2E1VA 4G22A 3L60A 2FY5A 1S5OA 2I9DA 3B30A 4HVMA 1DPCA 1L5AA 2VSQA 2RKVA 5KJUA 1Q6XA 1Q9JA 2II3A 2II5A 4KECA 1EACA 2FY3A 5KJSA 4EP9A 2FY4A 5T3EA 1NDBA 5FALA 2RKTA 2BGHA 2IHWA 1NOCB 3FP0A 1XL8A 4G0BA 4KE4A 2XHGA 1CIAA 2H3PA 4EYWA 2JGPA 1Q23A
chains in the Genus database with same CATH topology
4CLAA 1SCZA 1DPDA 2XR7A 3B2SA 4JN5A 5FANA 4N72A 5KJSA 1XMCA 2CLAA 2II5A 4G2MA 1XL7A 2JGPA 5DU9A 5T3EA 5FALA 4JN3A 1C4TA 1EAAA 4G22A 2E1VA 3CLAA 1E2OA 2RKTA 2BGHA 2IHWA 3L60A 1EABA 3U9BA 5KJWA 1NOCB 1DPBA 2E1TA 2I9DA 2II4A 3FP0A 3B30A 1QCAA 1XL8A 3FOTA 4HVMA 2ZBAA 1CLAA 3U9FA 1DPCA 1L5AA 5KJTA 2VSQA 4G0BA 2RKVA 5DUAA 4KE4A 5KJUA 2XHGA 5KJVA 1CIAA 1EAFA 3MAEA 1EAEA 1XMDA 1Q9JA 2II3A 1PD5A 2E1UA 4KECA 1EADA 1EACA 1Q23A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CLA A;  1SCZ A;  1DPD A;  2XR7 A;  3B2S A;  4JN5 A;  5FAN A;  4N72 A;  5KJS A;  1XMC A;  2CLA A;  2II5 A;  4G2M A;  1XL7 A;  2JGP A;  5DU9 A;  5T3E A;  5FAL A;  4JN3 A;  1C4T A;  1EAA A;  4G22 A;  2E1V A;  3CLA A;  1E2O A;  2RKT A;  2BGH A;  2IHW A;  3L60 A;  1EAB A;  3U9B A;  5KJW A;  1NOC B;  1DPB A;  2E1T A;  2I9D A;  2II4 A;  3FP0 A;  3B30 A;  1QCA A;  1XL8 A;  3FOT A;  4HVM A;  2ZBA A;  1CLA A;  3U9F A;  1DPC A;  1L5A A;  5KJT A;  2VSQ A;  4G0B A;  2RKV A;  5DUA A;  4KE4 A;  5KJU A;  2XHG A;  5KJV A;  1CIA A;  1EAF A;  3MAE A;  1EAE A;  1XMD A;  1Q9J A;  2II3 A;  1PD5 A;  2E1U A;  4KEC A;  1EAD A;  1EAC A;  1Q23 A; 
#chains in the Genus database with same CATH topology
 2XR7 A;  5FAN A;  4G2M A;  2FY2 A;  3CLA A;  5KJW A;  3U9B A;  1T1U A;  2E1T A;  2II4 A;  2ZBA A;  5KJT A;  5DUA A;  5KJV A;  1EAF A;  1PD5 A;  2E1U A;  1T7Q A;  4CLA A;  2H3U A;  1DPD A;  2FYO A;  1XL7 A;  2RCU A;  1NDF A;  1E2O A;  1EAB A;  1NM8 A;  1DPB A;  1T7N A;  1QCA A;  3FOT A;  3U9F A;  1CLA A;  2H3W A;  2FW3 A;  3MAE A;  1EAE A;  1XMD A;  2DEB A;  1NDI A;  1EAD A;  5DU9 A;  4EPH A;  1SCZ A;  1T7O A;  3B2S A;  4JN5 A;  4N72 A;  1XMC A;  2CLA A;  4JN3 A;  1C4T A;  1EAA A;  2H4T A;  2E1V A;  4G22 A;  3L60 A;  2FY5 A;  1S5O A;  2I9D A;  3B30 A;  4HVM A;  1DPC A;  1L5A A;  2VSQ A;  2RKV A;  5KJU A;  1Q6X A;  1Q9J A;  2II3 A;  2II5 A;  4KEC A;  1EAC A;  2FY3 A;  5KJS A;  4EP9 A;  2FY4 A;  5T3E A;  1NDB A;  5FAL A;  2RKT A;  2BGH A;  2IHW A;  1NOC B;  3FP0 A;  1XL8 A;  4G0B A;  4KE4 A;  2XHG A;  1CIA A;  2H3P A;  4EYW A;  2JGP A;  1Q23 A; 
#chains in the Genus database with same CATH homology
 4CLA A;  1SCZ A;  1DPD A;  2XR7 A;  3B2S A;  4JN5 A;  5FAN A;  4N72 A;  5KJS A;  1XMC A;  2CLA A;  2II5 A;  4G2M A;  1XL7 A;  2JGP A;  5DU9 A;  5T3E A;  5FAL A;  4JN3 A;  1C4T A;  1EAA A;  4G22 A;  2E1V A;  3CLA A;  1E2O A;  2RKT A;  2BGH A;  2IHW A;  3L60 A;  1EAB A;  3U9B A;  5KJW A;  1NOC B;  1DPB A;  2E1T A;  2I9D A;  2II4 A;  3FP0 A;  3B30 A;  1QCA A;  1XL8 A;  3FOT A;  4HVM A;  2ZBA A;  1CLA A;  3U9F A;  1DPC A;  1L5A A;  5KJT A;  2VSQ A;  4G0B A;  2RKV A;  5DUA A;  4KE4 A;  5KJU A;  2XHG A;  5KJV A;  1CIA A;  1EAF A;  3MAE A;  1EAE A;  1XMD A;  1Q9J A;  2II3 A;  1PD5 A;  2E1U A;  4KEC A;  1EAD A;  1EAC A;  1Q23 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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