1T7NA

Crystal structure of the m564g mutant of murine crat
Total Genus 219
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
219
sequence length
599
structure length
599
Chain Sequence
SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVGFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
molecule keywords Carnitine acetyltransferase
publication title Structural and biochemical studies of the substrate selectivity of carnitine acetyltransferase
pubmed doi rcsb
source organism Mus musculus
total genus 219
structure length 599
sequence length 599
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2004-05-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7nA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7nA02
4EPHA 1T7NA 1NDBA 1T7OA 2FY3A 2FY2A 1S5OA 2H3WA 1NM8A 2DEBA 2H4TA 1Q6XA 2H3PA 2FYOA 1NDFA 2FY5A 4EP9A 1T7QA 2FW3A 1T1UA 4EYWA 1NDIA 2H3UA 2FY4A 2RCUA
chains in the Genus database with same CATH superfamily
5DU9A 1PD5A 3FP0A 1XMDA 1EAFA 1NOCB 1QCAA 2RKVA 1C4TA 1XL8A 4HVMA 2FY5A 2ZBAA 5KJVA 2II4A 5T3EA 1NDIA 2H3UA 5KJSA 4G0BA 2VSQA 5KJTA 1E2OA 4KE4A 5FANA 2CLAA 1T7OA 2BGHA 3U9BA 3L60A 2E1TA 2RKTA 5DUAA 2H3PA 1CLAA 1EAAA 2XHGA 1T7QA 2II3A 2I9DA 2FY4A 4EPHA 1DPCA 3B2SA 1L5AA 3U9FA 4G22A 4KECA 1S5OA 1XL7A 1EADA 1NM8A 1SCZA 2H4TA 1Q6XA 1Q9JA 1NDFA 4JN3A 4N72A 1DPBA 3CLAA 4CLAA 2E1UA 2II5A 2RCUA 2IHWA 1EACA 1Q23A 1T7NA 3MAEA 5KJWA 5KJUA 1NDBA 4JN5A 2FY3A 2FY2A 2JGPA 2XR7A 2H3WA 2DEBA 2FYOA 1CIAA 4EP9A 5FALA 3FOTA 1XMCA 2FW3A 1EABA 2E1VA 1T1UA 4G2MA 4EYWA 3B30A 1DPDA 1EAEA
chains in the Genus database with same CATH topology
4EPHA 5DU9A 1T7NA 1L5AA 1NDBA 3FP0A 4JN5A 1T7OA 2FY3A 2FY2A 2JGPA 1S5OA 2H3WA 1NM8A 2DEBA 2H4TA 1Q6XA 5DUAA 2H3PA 1Q9JA 4HVMA 2FYOA 1NDFA 2FY5A 4EP9A 2XHGA 3FOTA 4JN3A 1T7QA 2FW3A 5T3EA 1T1UA 4EYWA 1NDIA 2H3UA 2FY4A 2VSQA 2RCUA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4EPH A;  1T7N A;  1NDB A;  1T7O A;  2FY3 A;  2FY2 A;  1S5O A;  2H3W A;  1NM8 A;  2DEB A;  2H4T A;  1Q6X A;  2H3P A;  2FYO A;  1NDF A;  2FY5 A;  4EP9 A;  1T7Q A;  2FW3 A;  1T1U A;  4EYW A;  1NDI A;  2H3U A;  2FY4 A;  2RCU A; 
#chains in the Genus database with same CATH topology
 5DU9 A;  1PD5 A;  3FP0 A;  1XMD A;  1EAF A;  1NOC B;  1QCA A;  2RKV A;  1C4T A;  1XL8 A;  4HVM A;  2FY5 A;  2ZBA A;  5KJV A;  2II4 A;  5T3E A;  1NDI A;  2H3U A;  5KJS A;  4G0B A;  2VSQ A;  5KJT A;  1E2O A;  4KE4 A;  5FAN A;  2CLA A;  1T7O A;  2BGH A;  3U9B A;  3L60 A;  2E1T A;  2RKT A;  5DUA A;  2H3P A;  1CLA A;  1EAA A;  2XHG A;  1T7Q A;  2II3 A;  2I9D A;  2FY4 A;  4EPH A;  1DPC A;  3B2S A;  1L5A A;  3U9F A;  4G22 A;  4KEC A;  1S5O A;  1XL7 A;  1EAD A;  1NM8 A;  1SCZ A;  2H4T A;  1Q6X A;  1Q9J A;  1NDF A;  4JN3 A;  4N72 A;  1DPB A;  3CLA A;  4CLA A;  2E1U A;  2II5 A;  2RCU A;  2IHW A;  1EAC A;  1Q23 A;  1T7N A;  3MAE A;  5KJW A;  5KJU A;  1NDB A;  4JN5 A;  2FY3 A;  2FY2 A;  2JGP A;  2XR7 A;  2H3W A;  2DEB A;  2FYO A;  1CIA A;  4EP9 A;  5FAL A;  3FOT A;  1XMC A;  2FW3 A;  1EAB A;  2E1V A;  1T1U A;  4G2M A;  4EYW A;  3B30 A;  1DPD A;  1EAE A; 
#chains in the Genus database with same CATH homology
 4EPH A;  5DU9 A;  1T7N A;  1L5A A;  1NDB A;  3FP0 A;  4JN5 A;  1T7O A;  2FY3 A;  2FY2 A;  2JGP A;  1S5O A;  2H3W A;  1NM8 A;  2DEB A;  2H4T A;  1Q6X A;  5DUA A;  2H3P A;  1Q9J A;  4HVM A;  2FYO A;  1NDF A;  2FY5 A;  4EP9 A;  2XHG A;  3FOT A;  4JN3 A;  1T7Q A;  2FW3 A;  5T3E A;  1T1U A;  4EYW A;  1NDI A;  2H3U A;  2FY4 A;  2VSQ A;  2RCU A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...