1T7NA

Crystal structure of the m564g mutant of murine crat
Total Genus 219
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
219
sequence length
599
structure length
599
Chain Sequence
SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVGFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Carnitine acetyltransferase
publication title Structural and biochemical studies of the substrate selectivity of carnitine acetyltransferase
pubmed doi rcsb
source organism Mus musculus
molecule tags Transferase
total genus 219
structure length 599
sequence length 599
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2004-05-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7nA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7nA02
1NDIA 1NM8A 1T7NA 2H3WA 2FYOA 2FY5A 1S5OA 2DEBA 1Q6XA 2H3UA 2H4TA 2FW3A 2H3PA 1T7QA 2FY4A 1NDFA 2RCUA 4EP9A 2FY2A 1NDBA 4EPHA 4EYWA 1T7OA 1T1UA 2FY3A
chains in the Genus database with same CATH superfamily
2RKVA 2RKTA 1CIAA 1QCAA 1XMDA 2FYOA 2DEBA 5KJUA 4N72A 1Q23A 2FY4A 3FP0A 1EAFA 4EP9A 4G0BA 4CLAA 4EYWA 1T1UA 3B30A 2XR7A 1E2OA 1NOCB 5DU9A 1XL8A 1S5OA 1SCZA 2H3UA 4KECA 2H4TA 4HVMA 4JN3A 2FW3A 2XHGA 1CLAA 2RCUA 2IHWA 2FY2A 3FOTA 4EPHA 1EAEA 1NDIA 1DPBA 1NM8A 5FALA 1XMCA 2H3WA 5T3EA 1DPDA 1DPCA 3MAEA 2E1TA 4G22A 1EAAA 2II3A 2ZBAA 5KJTA 4G2MA 1L5AA 1NDFA 1Q9JA 5KJWA 5KJSA 2BGHA 1T7OA 3U9BA 2II4A 2FY3A 4JN5A 1NDBA 2JGPA 4KE4A 2I9DA 1T7NA 2E1UA 2FY5A 1Q6XA 1XL7A 2E1VA 1C4TA 3B2SA 2H3PA 1EADA 3U9FA 3CLAA 1PD5A 1T7QA 3L60A 5KJVA 2VSQA 1EACA 2II5A 5FANA 1EABA 2CLAA 5DUAA
chains in the Genus database with same CATH topology
2JGPA 1NDIA 1NM8A 1T7NA 2H3WA 5T3EA 5DU9A 2FYOA 2FY5A 1S5OA 2DEBA 1Q6XA 2H3UA 2H4TA 4HVMA 4JN3A 2FW3A 2XHGA 2H3PA 1T7QA 1L5AA 2FY4A 1NDFA 2RCUA 1Q9JA 3FP0A 4EP9A 2VSQA 2FY2A 3FOTA 4EPHA 4EYWA 1T7OA 2FY3A 1T1UA 1NDBA 4JN5A 5DUAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1NDI A;  1NM8 A;  1T7N A;  2H3W A;  2FYO A;  2FY5 A;  1S5O A;  2DEB A;  1Q6X A;  2H3U A;  2H4T A;  2FW3 A;  2H3P A;  1T7Q A;  2FY4 A;  1NDF A;  2RCU A;  4EP9 A;  2FY2 A;  1NDB A;  4EPH A;  4EYW A;  1T7O A;  1T1U A;  2FY3 A; 
#chains in the Genus database with same CATH topology
 2RKV A;  2RKT A;  1CIA A;  1QCA A;  1XMD A;  2FYO A;  2DEB A;  5KJU A;  4N72 A;  1Q23 A;  2FY4 A;  3FP0 A;  1EAF A;  4EP9 A;  4G0B A;  4CLA A;  4EYW A;  1T1U A;  3B30 A;  2XR7 A;  1E2O A;  1NOC B;  5DU9 A;  1XL8 A;  1S5O A;  1SCZ A;  2H3U A;  4KEC A;  2H4T A;  4HVM A;  4JN3 A;  2FW3 A;  2XHG A;  1CLA A;  2RCU A;  2IHW A;  2FY2 A;  3FOT A;  4EPH A;  1EAE A;  1NDI A;  1DPB A;  1NM8 A;  5FAL A;  1XMC A;  2H3W A;  5T3E A;  1DPD A;  1DPC A;  3MAE A;  2E1T A;  4G22 A;  1EAA A;  2II3 A;  2ZBA A;  5KJT A;  4G2M A;  1L5A A;  1NDF A;  1Q9J A;  5KJW A;  5KJS A;  2BGH A;  1T7O A;  3U9B A;  2II4 A;  2FY3 A;  4JN5 A;  1NDB A;  2JGP A;  4KE4 A;  2I9D A;  1T7N A;  2E1U A;  2FY5 A;  1Q6X A;  1XL7 A;  2E1V A;  1C4T A;  3B2S A;  2H3P A;  1EAD A;  3U9F A;  3CLA A;  1PD5 A;  1T7Q A;  3L60 A;  5KJV A;  2VSQ A;  1EAC A;  2II5 A;  5FAN A;  1EAB A;  2CLA A;  5DUA A; 
#chains in the Genus database with same CATH homology
 2JGP A;  1NDI A;  1NM8 A;  1T7N A;  2H3W A;  5T3E A;  5DU9 A;  2FYO A;  2FY5 A;  1S5O A;  2DEB A;  1Q6X A;  2H3U A;  2H4T A;  4HVM A;  4JN3 A;  2FW3 A;  2XHG A;  2H3P A;  1T7Q A;  1L5A A;  2FY4 A;  1NDF A;  2RCU A;  1Q9J A;  3FP0 A;  4EP9 A;  2VSQ A;  2FY2 A;  3FOT A;  4EPH A;  4EYW A;  1T7O A;  2FY3 A;  1T1U A;  1NDB A;  4JN5 A;  5DUA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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