1EAEA

Atomic structure of the cubic core of the pyruvate dehydrogenase multienzyme complex
Total Genus 67
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
67
sequence length
243
structure length
243
Chain Sequence
IPPIPPVDFAKYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAKKAGVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRAILL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords DIHYDROLIPOYL-TRANSACETYLASE
publication title Crystallographic analysis of substrate binding and catalysis in dihydrolipoyl transacetylase (E2p).
pubmed doi rcsb
source organism Azotobacter vinelandii
molecule tags Dihydrolipoamide acetyltransferase
total genus 67
structure length 243
sequence length 243
ec nomenclature ec 2.3.1.12: Dihydrolipoyllysine-residue acetyltransferase.
pdb deposition date 1992-12-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00198 2-oxoacid_dh 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 1eaeA00
5KJUA 5DU9A 2E1TA 3U9BA 1DPCA 1XL7A 2BGHA 2II4A 2XR7A 5DUAA 5T3EA 2VSQA 3L60A 2E1UA 3B2SA 5KJSA 1EADA 2II5A 1SCZA 2XHGA 3B30A 3U9FA 2CLAA 5KJVA 3MAEA 2RKVA 1C4TA 4G22A 1XL8A 3FP0A 1L5AA 1Q23A 2ZBAA 4KE4A 1EACA 2E1VA 4KECA 1NOCB 1Q9JA 5FALA 2IHWA 1DPBA 4CLAA 1EAAA 1XMCA 4G2MA 1EAEA 5FANA 1PD5A 2II3A 2JGPA 4JN3A 1E2OA 4HVMA 1XMDA 2RKTA 4G0BA 1DPDA 3FOTA 1EAFA 3CLAA 2I9DA 1CLAA 1QCAA 1EABA 5KJWA 4N72A 4JN5A 5KJTA 1CIAA
chains in the Genus database with same CATH superfamily
5DU9A 2E1TA 2BGHA 5DUAA 2FY2A 2VSQA 3B2SA 3B30A 2CLAA 1C4TA 3FP0A 2IHWA 1NDIA 1NM8A 2H3UA 5FANA 1EAEA 1PD5A 2II3A 1Q6XA 2DEBA 4EP9A 1T7OA 1XMDA 2I9DA 1EABA 4N72A 5KJUA 1DPCA 1XL7A 4EYWA 5KJSA 2II5A 1T7QA 5KJVA 1NDFA 2RKVA 3MAEA 1T7NA 1L5AA 4KECA 2RCUA 1NOCB 2FY4A 2H3PA 4G2MA 1S5OA 1T1UA 4JN5A 2II4A 4EPHA 2XR7A 2E1UA 1SCZA 2FY5A 4KE4A 2ZBAA 1Q9JA 1EAAA 2FYOA 2H3WA 1DPDA 3FOTA 1EAFA 1CLAA 1QCAA 5KJTA 1CIAA 3U9BA 5T3EA 3L60A 1EADA 2XHGA 3U9FA 2H4TA 4G22A 1XL8A 2FY3A 1Q23A 1NDBA 1EACA 2E1VA 5FALA 1DPBA 4CLAA 1XMCA 2JGPA 4JN3A 1E2OA 4HVMA 2RKTA 4G0BA 3CLAA 5KJWA 2FW3A
chains in the Genus database with same CATH topology
5KJUA 5DU9A 2E1TA 3U9BA 1DPCA 1XL7A 2BGHA 2II4A 2XR7A 5DUAA 5T3EA 2VSQA 3L60A 2E1UA 3B2SA 5KJSA 1EADA 2II5A 1SCZA 2XHGA 3B30A 3U9FA 2CLAA 5KJVA 3MAEA 2RKVA 1C4TA 4G22A 1XL8A 3FP0A 1L5AA 1Q23A 2ZBAA 4KE4A 1EACA 2E1VA 4KECA 1NOCB 1Q9JA 5FALA 2IHWA 1DPBA 4CLAA 1EAAA 1XMCA 4G2MA 1EAEA 5FANA 1PD5A 2II3A 2JGPA 4JN3A 1E2OA 4HVMA 1XMDA 2RKTA 4G0BA 1DPDA 3FOTA 1EAFA 3CLAA 2I9DA 1CLAA 1QCAA 1EABA 5KJWA 4N72A 4JN5A 5KJTA 1CIAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5KJU A;  5DU9 A;  2E1T A;  3U9B A;  1DPC A;  1XL7 A;  2BGH A;  2II4 A;  2XR7 A;  5DUA A;  5T3E A;  2VSQ A;  3L60 A;  2E1U A;  3B2S A;  5KJS A;  1EAD A;  2II5 A;  1SCZ A;  2XHG A;  3B30 A;  3U9F A;  2CLA A;  5KJV A;  3MAE A;  2RKV A;  1C4T A;  4G22 A;  1XL8 A;  3FP0 A;  1L5A A;  1Q23 A;  2ZBA A;  4KE4 A;  1EAC A;  2E1V A;  4KEC A;  1NOC B;  1Q9J A;  5FAL A;  2IHW A;  1DPB A;  4CLA A;  1EAA A;  1XMC A;  4G2M A;  1EAE A;  5FAN A;  1PD5 A;  2II3 A;  2JGP A;  4JN3 A;  1E2O A;  4HVM A;  1XMD A;  2RKT A;  4G0B A;  1DPD A;  3FOT A;  1EAF A;  3CLA A;  2I9D A;  1CLA A;  1QCA A;  1EAB A;  5KJW A;  4N72 A;  4JN5 A;  5KJT A;  1CIA A; 
#chains in the Genus database with same CATH topology
 5DU9 A;  2E1T A;  2BGH A;  5DUA A;  2FY2 A;  2VSQ A;  3B2S A;  3B30 A;  2CLA A;  1C4T A;  3FP0 A;  2IHW A;  1NDI A;  1NM8 A;  2H3U A;  5FAN A;  1EAE A;  1PD5 A;  2II3 A;  1Q6X A;  2DEB A;  4EP9 A;  1T7O A;  1XMD A;  2I9D A;  1EAB A;  4N72 A;  5KJU A;  1DPC A;  1XL7 A;  4EYW A;  5KJS A;  2II5 A;  1T7Q A;  5KJV A;  1NDF A;  2RKV A;  3MAE A;  1T7N A;  1L5A A;  4KEC A;  2RCU A;  1NOC B;  2FY4 A;  2H3P A;  4G2M A;  1S5O A;  1T1U A;  4JN5 A;  2II4 A;  4EPH A;  2XR7 A;  2E1U A;  1SCZ A;  2FY5 A;  4KE4 A;  2ZBA A;  1Q9J A;  1EAA A;  2FYO A;  2H3W A;  1DPD A;  3FOT A;  1EAF A;  1CLA A;  1QCA A;  5KJT A;  1CIA A;  3U9B A;  5T3E A;  3L60 A;  1EAD A;  2XHG A;  3U9F A;  2H4T A;  4G22 A;  1XL8 A;  2FY3 A;  1Q23 A;  1NDB A;  1EAC A;  2E1V A;  5FAL A;  1DPB A;  4CLA A;  1XMC A;  2JGP A;  4JN3 A;  1E2O A;  4HVM A;  2RKT A;  4G0B A;  3CLA A;  5KJW A;  2FW3 A; 
#chains in the Genus database with same CATH homology
 5KJU A;  5DU9 A;  2E1T A;  3U9B A;  1DPC A;  1XL7 A;  2BGH A;  2II4 A;  2XR7 A;  5DUA A;  5T3E A;  2VSQ A;  3L60 A;  2E1U A;  3B2S A;  5KJS A;  1EAD A;  2II5 A;  1SCZ A;  2XHG A;  3B30 A;  3U9F A;  2CLA A;  5KJV A;  3MAE A;  2RKV A;  1C4T A;  4G22 A;  1XL8 A;  3FP0 A;  1L5A A;  1Q23 A;  2ZBA A;  4KE4 A;  1EAC A;  2E1V A;  4KEC A;  1NOC B;  1Q9J A;  5FAL A;  2IHW A;  1DPB A;  4CLA A;  1EAA A;  1XMC A;  4G2M A;  1EAE A;  5FAN A;  1PD5 A;  2II3 A;  2JGP A;  4JN3 A;  1E2O A;  4HVM A;  1XMD A;  2RKT A;  4G0B A;  1DPD A;  3FOT A;  1EAF A;  3CLA A;  2I9D A;  1CLA A;  1QCA A;  1EAB A;  5KJW A;  4N72 A;  4JN5 A;  5KJT A;  1CIA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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