5KJUA

Crystal structure of arabidopsis thaliana hct in complex with p-coumaroylshikimate
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
431
structure length
431
Chain Sequence
MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Shikimate O-hydroxycinnamoyltransferase
publication title Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Transferase
total genus 119
structure length 431
sequence length 431
ec nomenclature ec 2.3.1.133: Shikimate O-hydroxycinnamoyltransferase.
pdb deposition date 2016-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjuA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjuA01
4N72A 5KJTA 2RKVA 1EAFA 2E1VA 2IHWA 1EACA 1XMCA 5DUAA 1L5AA 4CLAA 1DPBA 1DPDA 1CLAA 2II4A 1XL8A 5KJUA 2BGHA 2XR7A 5KJVA 1XL7A 1PD5A 3B30A 2CLAA 1QCAA 5DU9A 1DPCA 1EAAA 1Q9JA 5KJSA 2XHGA 1XMDA 1Q23A 3FOTA 3CLAA 4JN3A 5FALA 1CIAA 2JGPA 5T3EA 4G2MA 3B2SA 4HVMA 4G22A 1SCZA 1NOCB 2E1TA 1C4TA 3U9FA 3MAEA 2E1UA 2ZBAA 3L60A 3U9BA 3FP0A 5FANA 4JN5A 2II5A 2I9DA 2VSQA 2II3A 1EAEA 5KJWA 1E2OA 4KE4A 4KECA 1EABA 1EADA 2RKTA 4G0BA
chains in the Genus database with same CATH superfamily
5KJTA 1EAFA 2E1VA 1EACA 1XMCA 4CLAA 1DPBA 2II4A 1XL8A 4EYWA 1NM8A 4JN3A 2FYOA 3B2SA 4G22A 1NDIA 1NOCB 3U9FA 3L60A 3U9BA 1S5OA 1EABA 4N72A 2H3UA 2IHWA 1NDFA 1T7NA 1T7OA 2FY5A 5KJVA 3B30A 1QCAA 5DU9A 1Q9JA 1Q23A 2JGPA 2H3PA 4HVMA 1SCZA 1C4TA 2FY4A 2E1UA 3FP0A 4JN5A 4EP9A 2VSQA 2II3A 5KJWA 1E2OA 2H4TA 4KECA 4G0BA 1Q6XA 1L5AA 1DPDA 2CLAA 1DPCA 1XMDA 2DEBA 3CLAA 5FALA 1CIAA 5T3EA 1T7QA 2ZBAA 4EPHA 2RCUA 4KE4A 1CLAA 1EADA 2RKVA 5DUAA 5KJUA 2XR7A 2H3WA 1XL7A 1PD5A 2FY2A 1EAAA 5KJSA 2XHGA 3FOTA 1T1UA 4G2MA 1NDBA 2E1TA 3MAEA 2FY3A 5FANA 2II5A 2I9DA 1EAEA 2FW3A 2BGHA 2RKTA
chains in the Genus database with same CATH topology
4N72A 5KJTA 2RKVA 1EAFA 2E1VA 2IHWA 1EACA 1XMCA 5DUAA 1L5AA 4CLAA 1DPBA 1DPDA 1CLAA 2II4A 1XL8A 5KJUA 2BGHA 2XR7A 5KJVA 1XL7A 1PD5A 3B30A 2CLAA 1QCAA 5DU9A 1DPCA 1EAAA 1Q9JA 5KJSA 2XHGA 1XMDA 1Q23A 3FOTA 3CLAA 4JN3A 5FALA 1CIAA 2JGPA 5T3EA 4G2MA 3B2SA 4HVMA 4G22A 1SCZA 1NOCB 2E1TA 1C4TA 3U9FA 3MAEA 2E1UA 2ZBAA 3L60A 3U9BA 3FP0A 5FANA 4JN5A 2II5A 2I9DA 2VSQA 2II3A 1EAEA 5KJWA 1E2OA 4KE4A 4KECA 1EABA 1EADA 2RKTA 4G0BA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4N72 A;  5KJT A;  2RKV A;  1EAF A;  2E1V A;  2IHW A;  1EAC A;  1XMC A;  5DUA A;  1L5A A;  4CLA A;  1DPB A;  1DPD A;  1CLA A;  2II4 A;  1XL8 A;  5KJU A;  2BGH A;  2XR7 A;  5KJV A;  1XL7 A;  1PD5 A;  3B30 A;  2CLA A;  1QCA A;  5DU9 A;  1DPC A;  1EAA A;  1Q9J A;  5KJS A;  2XHG A;  1XMD A;  1Q23 A;  3FOT A;  3CLA A;  4JN3 A;  5FAL A;  1CIA A;  2JGP A;  5T3E A;  4G2M A;  3B2S A;  4HVM A;  4G22 A;  1SCZ A;  1NOC B;  2E1T A;  1C4T A;  3U9F A;  3MAE A;  2E1U A;  2ZBA A;  3L60 A;  3U9B A;  3FP0 A;  5FAN A;  4JN5 A;  2II5 A;  2I9D A;  2VSQ A;  2II3 A;  1EAE A;  5KJW A;  1E2O A;  4KE4 A;  4KEC A;  1EAB A;  1EAD A;  2RKT A;  4G0B A; 
#chains in the Genus database with same CATH topology
 5KJT A;  1EAF A;  2E1V A;  1EAC A;  1XMC A;  4CLA A;  1DPB A;  2II4 A;  1XL8 A;  4EYW A;  1NM8 A;  4JN3 A;  2FYO A;  3B2S A;  4G22 A;  1NDI A;  1NOC B;  3U9F A;  3L60 A;  3U9B A;  1S5O A;  1EAB A;  4N72 A;  2H3U A;  2IHW A;  1NDF A;  1T7N A;  1T7O A;  2FY5 A;  5KJV A;  3B30 A;  1QCA A;  5DU9 A;  1Q9J A;  1Q23 A;  2JGP A;  2H3P A;  4HVM A;  1SCZ A;  1C4T A;  2FY4 A;  2E1U A;  3FP0 A;  4JN5 A;  4EP9 A;  2VSQ A;  2II3 A;  5KJW A;  1E2O A;  2H4T A;  4KEC A;  4G0B A;  1Q6X A;  1L5A A;  1DPD A;  2CLA A;  1DPC A;  1XMD A;  2DEB A;  3CLA A;  5FAL A;  1CIA A;  5T3E A;  1T7Q A;  2ZBA A;  4EPH A;  2RCU A;  4KE4 A;  1CLA A;  1EAD A;  2RKV A;  5DUA A;  5KJU A;  2XR7 A;  2H3W A;  1XL7 A;  1PD5 A;  2FY2 A;  1EAA A;  5KJS A;  2XHG A;  3FOT A;  1T1U A;  4G2M A;  1NDB A;  2E1T A;  3MAE A;  2FY3 A;  5FAN A;  2II5 A;  2I9D A;  1EAE A;  2FW3 A;  2BGH A;  2RKT A; 
#chains in the Genus database with same CATH homology
 4N72 A;  5KJT A;  2RKV A;  1EAF A;  2E1V A;  2IHW A;  1EAC A;  1XMC A;  5DUA A;  1L5A A;  4CLA A;  1DPB A;  1DPD A;  1CLA A;  2II4 A;  1XL8 A;  5KJU A;  2BGH A;  2XR7 A;  5KJV A;  1XL7 A;  1PD5 A;  3B30 A;  2CLA A;  1QCA A;  5DU9 A;  1DPC A;  1EAA A;  1Q9J A;  5KJS A;  2XHG A;  1XMD A;  1Q23 A;  3FOT A;  3CLA A;  4JN3 A;  5FAL A;  1CIA A;  2JGP A;  5T3E A;  4G2M A;  3B2S A;  4HVM A;  4G22 A;  1SCZ A;  1NOC B;  2E1T A;  1C4T A;  3U9F A;  3MAE A;  2E1U A;  2ZBA A;  3L60 A;  3U9B A;  3FP0 A;  5FAN A;  4JN5 A;  2II5 A;  2I9D A;  2VSQ A;  2II3 A;  1EAE A;  5KJW A;  1E2O A;  4KE4 A;  4KEC A;  1EAB A;  1EAD A;  2RKT A;  4G0B A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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