5KJUA

Crystal structure of arabidopsis thaliana hct in complex with p-coumaroylshikimate
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
431
structure length
431
Chain Sequence
b'MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLF'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Shikimate O-hydroxycinnamoyltransferase
publication title Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Transferase
total genus 119
structure length 431
sequence length 431
ec nomenclature ec 2.3.1.133: Shikimate O-hydroxycinnamoyltransferase.
pdb deposition date 2016-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjuA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjuA01
4HVMA 1PD5A 1C4TA 1XL7A 4KECA 2E1TA 1EAAA 1CIAA 1XL8A 1EADA 1Q23A 2VSQA 1SCZA 2XHGA 5DU9A 4CLAA 2RKVA 5KJUA 3B2SA 1DPBA 5FANA 1XMCA 4N72A 3L60A 5KJSA 1CLAA 1NOCB 1QCAA 2I9DA 5KJWA 1EACA 5DUAA 1L5AA 3FOTA 4G0BA 5T3EA 2II4A 3U9FA 2XR7A 1XMDA 5KJTA 1EAFA 2BGHA 2E1UA 4G2MA 4JN5A 2ZBAA 2II5A 3B30A 3CLAA 2CLAA 3MAEA 1DPDA 1Q9JA 2II3A 5FALA 4KE4A 1EABA 3FP0A 3U9BA 1E2OA 1DPCA 5KJVA 2RKTA 2JGPA 1EAEA 2E1VA 2IHWA 4JN3A 4G22A
chains in the Genus database with same CATH superfamily
1Q6XA 1CIAA 1EADA 2VSQA 5KJUA 2FW3A 2RCUA 3B2SA 4N72A 3L60A 1CLAA 1QCAA 2H4TA 2BGHA 2E1UA 2FY4A 1T7OA 2II5A 1DPDA 2II3A 3U9BA 1DPCA 2JGPA 1PD5A 2H3UA 1SCZA 1NM8A 2XHGA 5DU9A 4EP9A 5KJSA 1NOCB 1NDBA 2I9DA 5KJWA 5DUAA 5T3EA 1EAFA 2DEBA 3MAEA 1EABA 2FY3A 1T1UA 2RKTA 1EAEA 2E1VA 4JN3A 4HVMA 1C4TA 1XL7A 2E1TA 1EAAA 1XL8A 1Q23A 4CLAA 4EPHA 1T7NA 2RKVA 2H3PA 5FANA 1XMCA 1T7QA 2II4A 2XR7A 2FYOA 5KJTA 2FY2A 2ZBAA 3B30A 4KE4A 3FP0A 2FY5A 1E2OA 1NDIA 1NDFA 2IHWA 1S5OA 4KECA 1DPBA 2H3WA 1EACA 1L5AA 3FOTA 4G0BA 3U9FA 1XMDA 4JN5A 4G2MA 3CLAA 2CLAA 1Q9JA 5FALA 4EYWA 5KJVA 4G22A
chains in the Genus database with same CATH topology
4HVMA 1PD5A 1C4TA 1XL7A 4KECA 2E1TA 1EAAA 1CIAA 1XL8A 1EADA 1Q23A 2VSQA 1SCZA 2XHGA 5DU9A 4CLAA 2RKVA 5KJUA 3B2SA 1DPBA 5FANA 1XMCA 4N72A 3L60A 5KJSA 1CLAA 1NOCB 1QCAA 2I9DA 5KJWA 1EACA 5DUAA 1L5AA 3FOTA 4G0BA 5T3EA 2II4A 3U9FA 2XR7A 1XMDA 5KJTA 1EAFA 2BGHA 2E1UA 4G2MA 4JN5A 2ZBAA 2II5A 3B30A 3CLAA 2CLAA 3MAEA 1DPDA 1Q9JA 2II3A 5FALA 4KE4A 1EABA 3FP0A 3U9BA 1E2OA 1DPCA 5KJVA 2RKTA 2JGPA 1EAEA 2E1VA 2IHWA 4JN3A 4G22A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4HVM A;  1PD5 A;  1C4T A;  1XL7 A;  4KEC A;  2E1T A;  1EAA A;  1CIA A;  1XL8 A;  1EAD A;  1Q23 A;  2VSQ A;  1SCZ A;  2XHG A;  5DU9 A;  4CLA A;  2RKV A;  5KJU A;  3B2S A;  1DPB A;  5FAN A;  1XMC A;  4N72 A;  3L60 A;  5KJS A;  1CLA A;  1NOC B;  1QCA A;  2I9D A;  5KJW A;  1EAC A;  5DUA A;  1L5A A;  3FOT A;  4G0B A;  5T3E A;  2II4 A;  3U9F A;  2XR7 A;  1XMD A;  5KJT A;  1EAF A;  2BGH A;  2E1U A;  4G2M A;  4JN5 A;  2ZBA A;  2II5 A;  3B30 A;  3CLA A;  2CLA A;  3MAE A;  1DPD A;  1Q9J A;  2II3 A;  5FAL A;  4KE4 A;  1EAB A;  3FP0 A;  3U9B A;  1E2O A;  1DPC A;  5KJV A;  2RKT A;  2JGP A;  1EAE A;  2E1V A;  2IHW A;  4JN3 A;  4G22 A; 
#chains in the Genus database with same CATH topology
 1Q6X A;  1CIA A;  1EAD A;  2VSQ A;  5KJU A;  2FW3 A;  2RCU A;  3B2S A;  4N72 A;  3L60 A;  1CLA A;  1QCA A;  2H4T A;  2BGH A;  2E1U A;  2FY4 A;  1T7O A;  2II5 A;  1DPD A;  2II3 A;  3U9B A;  1DPC A;  2JGP A;  1PD5 A;  2H3U A;  1SCZ A;  1NM8 A;  2XHG A;  5DU9 A;  4EP9 A;  5KJS A;  1NOC B;  1NDB A;  2I9D A;  5KJW A;  5DUA A;  5T3E A;  1EAF A;  2DEB A;  3MAE A;  1EAB A;  2FY3 A;  1T1U A;  2RKT A;  1EAE A;  2E1V A;  4JN3 A;  4HVM A;  1C4T A;  1XL7 A;  2E1T A;  1EAA A;  1XL8 A;  1Q23 A;  4CLA A;  4EPH A;  1T7N A;  2RKV A;  2H3P A;  5FAN A;  1XMC A;  1T7Q A;  2II4 A;  2XR7 A;  2FYO A;  5KJT A;  2FY2 A;  2ZBA A;  3B30 A;  4KE4 A;  3FP0 A;  2FY5 A;  1E2O A;  1NDI A;  1NDF A;  2IHW A;  1S5O A;  4KEC A;  1DPB A;  2H3W A;  1EAC A;  1L5A A;  3FOT A;  4G0B A;  3U9F A;  1XMD A;  4JN5 A;  4G2M A;  3CLA A;  2CLA A;  1Q9J A;  5FAL A;  4EYW A;  5KJV A;  4G22 A; 
#chains in the Genus database with same CATH homology
 4HVM A;  1PD5 A;  1C4T A;  1XL7 A;  4KEC A;  2E1T A;  1EAA A;  1CIA A;  1XL8 A;  1EAD A;  1Q23 A;  2VSQ A;  1SCZ A;  2XHG A;  5DU9 A;  4CLA A;  2RKV A;  5KJU A;  3B2S A;  1DPB A;  5FAN A;  1XMC A;  4N72 A;  3L60 A;  5KJS A;  1CLA A;  1NOC B;  1QCA A;  2I9D A;  5KJW A;  1EAC A;  5DUA A;  1L5A A;  3FOT A;  4G0B A;  5T3E A;  2II4 A;  3U9F A;  2XR7 A;  1XMD A;  5KJT A;  1EAF A;  2BGH A;  2E1U A;  4G2M A;  4JN5 A;  2ZBA A;  2II5 A;  3B30 A;  3CLA A;  2CLA A;  3MAE A;  1DPD A;  1Q9J A;  2II3 A;  5FAL A;  4KE4 A;  1EAB A;  3FP0 A;  3U9B A;  1E2O A;  1DPC A;  5KJV A;  2RKT A;  2JGP A;  1EAE A;  2E1V A;  2IHW A;  4JN3 A;  4G22 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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