1EADA

Atomic structure of the cubic core of the pyruvate dehydrogenase multienzyme complex
Total Genus 65
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
65
sequence length
243
structure length
243
Chain Sequence
IPPIPPVDFAKYGEIEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAKKAGVKLTVLPLLLKACAYLLKELPDFNSSLAPSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAFTPIVNAPEVAILGVSKASMQPVWDGKAFQPRLMLPLSLSYDHRVINGAAAARFTKRLGDLLADIRAILL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Dihydrolipoamide acetyltransferase
molecule keywords DIHYDROLIPOYL-TRANSACETYLASE
publication title Crystallographic analysis of substrate binding and catalysis in dihydrolipoyl transacetylase (E2p).
pubmed doi rcsb
source organism Azotobacter vinelandii
total genus 65
structure length 243
sequence length 243
ec nomenclature ec 2.3.1.12: Dihydrolipoyllysine-residue acetyltransferase.
pdb deposition date 1992-12-16

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00198 2-oxoacid_dh 2-oxoacid dehydrogenases acyltransferase (catalytic domain)
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 1eadA00
3L60A 2CLAA 1EAAA 1XL7A 5KJSA 1DPDA 2II4A 1XMCA 1EAFA 1Q23A 5DU9A 5DUAA 2E1TA 1XL8A 5KJTA 1SCZA 5KJWA 2IHWA 3B30A 5FALA 2XR7A 2II3A 5KJVA 2RKTA 4JN3A 4JN5A 1PD5A 5KJUA 3FOTA 1QCAA 1E2OA 1C4TA 1EAEA 2II5A 3CLAA 3FP0A 1Q9JA 4G22A 4CLAA 4KECA 4N72A 2E1UA 3MAEA 1CIAA 3B2SA 5T3EA 2I9DA 5FANA 1DPBA 1EACA 2BGHA 1NOCB 1DPCA 1XMDA 4G2MA 1EABA 2JGPA 1L5AA 3U9BA 2VSQA 2E1VA 4KE4A 1EADA 2RKVA 2XHGA 1CLAA 4HVMA 2ZBAA 4G0BA 3U9FA
chains in the Genus database with same CATH superfamily
1EAAA 1EAFA 2FY3A 5KJWA 1NDFA 2RKTA 4JN3A 2FY4A 3CLAA 1Q9JA 2FY2A 3MAEA 3B2SA 1DPCA 1L5AA 2JGPA 2E1VA 4KE4A 2FY5A 1Q6XA 4HVMA 3U9FA 1XL7A 5KJSA 1XMCA 1NM8A 2E1TA 2H3WA 2II3A 2H3UA 5KJUA 1NDIA 2FYOA 1EAEA 4CLAA 4KECA 1CIAA 5T3EA 5FANA 1DPBA 1NDBA 2BGHA 1XMDA 1EABA 1EADA 2RKVA 2H4TA 1S5OA 2II4A 2DEBA 5DU9A 5DUAA 1XL8A 5KJTA 2IHWA 3B30A 2RCUA 1QCAA 1C4TA 4EP9A 2I9DA 1T7NA 1NOCB 4EPHA 4G2MA 1T1UA 1T7QA 3L60A 2CLAA 1DPDA 1Q23A 1SCZA 5FALA 2XR7A 1T7OA 5KJVA 4JN5A 1PD5A 2FW3A 2H3PA 3FOTA 1E2OA 4G22A 2II5A 3FP0A 4N72A 2E1UA 1EACA 4EYWA 3U9BA 2VSQA 2XHGA 1CLAA 2ZBAA 4G0BA
chains in the Genus database with same CATH topology
3L60A 2CLAA 1EAAA 1XL7A 5KJSA 1DPDA 2II4A 1XMCA 1EAFA 1Q23A 5DU9A 5DUAA 2E1TA 1XL8A 5KJTA 1SCZA 5KJWA 2IHWA 3B30A 5FALA 2XR7A 2II3A 5KJVA 2RKTA 4JN3A 4JN5A 1PD5A 5KJUA 3FOTA 1QCAA 1E2OA 1C4TA 1EAEA 2II5A 3CLAA 3FP0A 1Q9JA 4G22A 4CLAA 4KECA 4N72A 2E1UA 3MAEA 1CIAA 3B2SA 5T3EA 2I9DA 5FANA 1DPBA 1EACA 2BGHA 1NOCB 1DPCA 1XMDA 4G2MA 1EABA 2JGPA 1L5AA 3U9BA 2VSQA 2E1VA 4KE4A 1EADA 2RKVA 2XHGA 1CLAA 4HVMA 2ZBAA 4G0BA 3U9FA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3L60 A;  2CLA A;  1EAA A;  1XL7 A;  5KJS A;  1DPD A;  2II4 A;  1XMC A;  1EAF A;  1Q23 A;  5DU9 A;  5DUA A;  2E1T A;  1XL8 A;  5KJT A;  1SCZ A;  5KJW A;  2IHW A;  3B30 A;  5FAL A;  2XR7 A;  2II3 A;  5KJV A;  2RKT A;  4JN3 A;  4JN5 A;  1PD5 A;  5KJU A;  3FOT A;  1QCA A;  1E2O A;  1C4T A;  1EAE A;  2II5 A;  3CLA A;  3FP0 A;  1Q9J A;  4G22 A;  4CLA A;  4KEC A;  4N72 A;  2E1U A;  3MAE A;  1CIA A;  3B2S A;  5T3E A;  2I9D A;  5FAN A;  1DPB A;  1EAC A;  2BGH A;  1NOC B;  1DPC A;  1XMD A;  4G2M A;  1EAB A;  2JGP A;  1L5A A;  3U9B A;  2VSQ A;  2E1V A;  4KE4 A;  1EAD A;  2RKV A;  2XHG A;  1CLA A;  4HVM A;  2ZBA A;  4G0B A;  3U9F A; 
#chains in the Genus database with same CATH topology
 1EAA A;  1EAF A;  2FY3 A;  5KJW A;  1NDF A;  2RKT A;  4JN3 A;  2FY4 A;  3CLA A;  1Q9J A;  2FY2 A;  3MAE A;  3B2S A;  1DPC A;  1L5A A;  2JGP A;  2E1V A;  4KE4 A;  2FY5 A;  1Q6X A;  4HVM A;  3U9F A;  1XL7 A;  5KJS A;  1XMC A;  1NM8 A;  2E1T A;  2H3W A;  2II3 A;  2H3U A;  5KJU A;  1NDI A;  2FYO A;  1EAE A;  4CLA A;  4KEC A;  1CIA A;  5T3E A;  5FAN A;  1DPB A;  1NDB A;  2BGH A;  1XMD A;  1EAB A;  1EAD A;  2RKV A;  2H4T A;  1S5O A;  2II4 A;  2DEB A;  5DU9 A;  5DUA A;  1XL8 A;  5KJT A;  2IHW A;  3B30 A;  2RCU A;  1QCA A;  1C4T A;  4EP9 A;  2I9D A;  1T7N A;  1NOC B;  4EPH A;  4G2M A;  1T1U A;  1T7Q A;  3L60 A;  2CLA A;  1DPD A;  1Q23 A;  1SCZ A;  5FAL A;  2XR7 A;  1T7O A;  5KJV A;  4JN5 A;  1PD5 A;  2FW3 A;  2H3P A;  3FOT A;  1E2O A;  4G22 A;  2II5 A;  3FP0 A;  4N72 A;  2E1U A;  1EAC A;  4EYW A;  3U9B A;  2VSQ A;  2XHG A;  1CLA A;  2ZBA A;  4G0B A; 
#chains in the Genus database with same CATH homology
 3L60 A;  2CLA A;  1EAA A;  1XL7 A;  5KJS A;  1DPD A;  2II4 A;  1XMC A;  1EAF A;  1Q23 A;  5DU9 A;  5DUA A;  2E1T A;  1XL8 A;  5KJT A;  1SCZ A;  5KJW A;  2IHW A;  3B30 A;  5FAL A;  2XR7 A;  2II3 A;  5KJV A;  2RKT A;  4JN3 A;  4JN5 A;  1PD5 A;  5KJU A;  3FOT A;  1QCA A;  1E2O A;  1C4T A;  1EAE A;  2II5 A;  3CLA A;  3FP0 A;  1Q9J A;  4G22 A;  4CLA A;  4KEC A;  4N72 A;  2E1U A;  3MAE A;  1CIA A;  3B2S A;  5T3E A;  2I9D A;  5FAN A;  1DPB A;  1EAC A;  2BGH A;  1NOC B;  1DPC A;  1XMD A;  4G2M A;  1EAB A;  2JGP A;  1L5A A;  3U9B A;  2VSQ A;  2E1V A;  4KE4 A;  1EAD A;  2RKV A;  2XHG A;  1CLA A;  4HVM A;  2ZBA A;  4G0B A;  3U9F A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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