2E1VA

Crystal structure of dendranthema morifolium dmat, seleno-methionine derivative
Total Genus 136
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
136
sequence length
445
structure length
440
Chain Sequence
ILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDRIIKYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSRNDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDNDLVSEGMPTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVHIFDDGL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords acyl transferase
publication title Structural and Mutational Studies of Anthocyanin Malonyltransferases Establish the Features of BAHD Enzyme Catalysis
pubmed doi rcsb
source organism Chrysanthemum x morifolium
total genus 136
structure length 440
sequence length 445
chains with identical sequence B
ec nomenclature ec 2.-.-.-:
pdb deposition date 2006-10-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 2e1vA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 2e1vA01
1QCAA 5KJWA 1EADA 1PD5A 2II3A 3U9FA 5KJVA 4JN5A 1E2OA 5KJTA 5DUAA 1XL8A 1DPDA 2I9DA 2E1UA 1Q23A 2XHGA 1L5AA 1CLAA 1EACA 3FP0A 1EABA 5T3EA 4G2MA 1NOCB 4G22A 3B2SA 5KJSA 3U9BA 2IHWA 2XR7A 4KECA 5DU9A 2E1VA 2II5A 5FANA 2CLAA 2RKTA 2VSQA 5KJUA 4CLAA 1XL7A 1XMCA 1EAAA 1SCZA 3MAEA 5FALA 1CIAA 1EAEA 2RKVA 1C4TA 1Q9JA 2E1TA 1DPBA 2ZBAA 3CLAA 3FOTA 4G0BA 4KE4A 2II4A 4HVMA 2JGPA 4N72A 1EAFA 2BGHA 3B30A 1XMDA 1DPCA 4JN3A 3L60A
chains in the Genus database with same CATH superfamily
5KJVA 2II3A 1XL8A 1T7OA 1Q23A 2XHGA 1L5AA 3FP0A 1NOCB 5KJSA 4KECA 4EP9A 2RKTA 2DEBA 2FY4A 1SCZA 5FALA 2RKVA 1C4TA 2E1TA 2JGPA 2H3WA 3B30A 1DPCA 3L60A 1NDFA 5KJTA 2FY2A 1T7NA 4G22A 2FY3A 2XR7A 5FANA 2CLAA 2VSQA 4CLAA 1XL7A 1EAAA 1Q6XA 5KJWA 1EAEA 4KE4A 1Q9JA 3CLAA 3FOTA 1T1UA 1NDBA 1EAFA 4JN3A 1QCAA 1PD5A 3U9FA 1S5OA 4JN5A 1E2OA 2E1UA 1T7QA 1CLAA 4G2MA 3B2SA 3U9BA 5DU9A 1NM8A 1XMCA 4G0BA 2II4A 4N72A 2BGHA 1XMDA 2FY5A 5KJUA 1EADA 5DUAA 1DPDA 2I9DA 1NDIA 1EACA 2FYOA 1EABA 5T3EA 2FW3A 2H4TA 2IHWA 4EYWA 2E1VA 2II5A 2RCUA 3MAEA 1CIAA 2ZBAA 2H3PA 1DPBA 4EPHA 4HVMA 2H3UA
chains in the Genus database with same CATH topology
1QCAA 5KJWA 1EADA 1PD5A 2II3A 3U9FA 5KJVA 4JN5A 1E2OA 5KJTA 5DUAA 1XL8A 1DPDA 2I9DA 2E1UA 1Q23A 2XHGA 1L5AA 1CLAA 1EACA 3FP0A 1EABA 5T3EA 4G2MA 1NOCB 4G22A 3B2SA 5KJSA 3U9BA 2IHWA 2XR7A 4KECA 5DU9A 2E1VA 2II5A 5FANA 2CLAA 2RKTA 2VSQA 5KJUA 4CLAA 1XL7A 1XMCA 1EAAA 1SCZA 3MAEA 5FALA 1CIAA 1EAEA 2RKVA 1C4TA 1Q9JA 2E1TA 1DPBA 2ZBAA 3CLAA 3FOTA 4G0BA 4KE4A 2II4A 4HVMA 2JGPA 4N72A 1EAFA 2BGHA 3B30A 1XMDA 1DPCA 4JN3A 3L60A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1QCA A;  5KJW A;  1EAD A;  1PD5 A;  2II3 A;  3U9F A;  5KJV A;  4JN5 A;  1E2O A;  5KJT A;  5DUA A;  1XL8 A;  1DPD A;  2I9D A;  2E1U A;  1Q23 A;  2XHG A;  1L5A A;  1CLA A;  1EAC A;  3FP0 A;  1EAB A;  5T3E A;  4G2M A;  1NOC B;  4G22 A;  3B2S A;  5KJS A;  3U9B A;  2IHW A;  2XR7 A;  4KEC A;  5DU9 A;  2E1V A;  2II5 A;  5FAN A;  2CLA A;  2RKT A;  2VSQ A;  5KJU A;  4CLA A;  1XL7 A;  1XMC A;  1EAA A;  1SCZ A;  3MAE A;  5FAL A;  1CIA A;  1EAE A;  2RKV A;  1C4T A;  1Q9J A;  2E1T A;  1DPB A;  2ZBA A;  3CLA A;  3FOT A;  4G0B A;  4KE4 A;  2II4 A;  4HVM A;  2JGP A;  4N72 A;  1EAF A;  2BGH A;  3B30 A;  1XMD A;  1DPC A;  4JN3 A;  3L60 A; 
#chains in the Genus database with same CATH topology
 5KJV A;  2II3 A;  1XL8 A;  1T7O A;  1Q23 A;  2XHG A;  1L5A A;  3FP0 A;  1NOC B;  5KJS A;  4KEC A;  4EP9 A;  2RKT A;  2DEB A;  2FY4 A;  1SCZ A;  5FAL A;  2RKV A;  1C4T A;  2E1T A;  2JGP A;  2H3W A;  3B30 A;  1DPC A;  3L60 A;  1NDF A;  5KJT A;  2FY2 A;  1T7N A;  4G22 A;  2FY3 A;  2XR7 A;  5FAN A;  2CLA A;  2VSQ A;  4CLA A;  1XL7 A;  1EAA A;  1Q6X A;  5KJW A;  1EAE A;  4KE4 A;  1Q9J A;  3CLA A;  3FOT A;  1T1U A;  1NDB A;  1EAF A;  4JN3 A;  1QCA A;  1PD5 A;  3U9F A;  1S5O A;  4JN5 A;  1E2O A;  2E1U A;  1T7Q A;  1CLA A;  4G2M A;  3B2S A;  3U9B A;  5DU9 A;  1NM8 A;  1XMC A;  4G0B A;  2II4 A;  4N72 A;  2BGH A;  1XMD A;  2FY5 A;  5KJU A;  1EAD A;  5DUA A;  1DPD A;  2I9D A;  1NDI A;  1EAC A;  2FYO A;  1EAB A;  5T3E A;  2FW3 A;  2H4T A;  2IHW A;  4EYW A;  2E1V A;  2II5 A;  2RCU A;  3MAE A;  1CIA A;  2ZBA A;  2H3P A;  1DPB A;  4EPH A;  4HVM A;  2H3U A; 
#chains in the Genus database with same CATH homology
 1QCA A;  5KJW A;  1EAD A;  1PD5 A;  2II3 A;  3U9F A;  5KJV A;  4JN5 A;  1E2O A;  5KJT A;  5DUA A;  1XL8 A;  1DPD A;  2I9D A;  2E1U A;  1Q23 A;  2XHG A;  1L5A A;  1CLA A;  1EAC A;  3FP0 A;  1EAB A;  5T3E A;  4G2M A;  1NOC B;  4G22 A;  3B2S A;  5KJS A;  3U9B A;  2IHW A;  2XR7 A;  4KEC A;  5DU9 A;  2E1V A;  2II5 A;  5FAN A;  2CLA A;  2RKT A;  2VSQ A;  5KJU A;  4CLA A;  1XL7 A;  1XMC A;  1EAA A;  1SCZ A;  3MAE A;  5FAL A;  1CIA A;  1EAE A;  2RKV A;  1C4T A;  1Q9J A;  2E1T A;  1DPB A;  2ZBA A;  3CLA A;  3FOT A;  4G0B A;  4KE4 A;  2II4 A;  4HVM A;  2JGP A;  4N72 A;  1EAF A;  2BGH A;  3B30 A;  1XMD A;  1DPC A;  4JN3 A;  3L60 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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