2H3WA

Crystal structure of the s554a/m564g mutant of murine carnitine acetyltransferase in complex with hexanoylcarnitine and coa
Total Genus 218
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
218
sequence length
599
structure length
599
Chain Sequence
SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTAQVPAKTDCVGFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule tags Transferase
source organism Mus musculus
publication title Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
pubmed doi rcsb
molecule keywords carnitine acetyltransferase
total genus 218
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2006-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3wA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3wA02
1T1UA 1T7NA 2FY4A 2FY5A 2FY3A 4EYWA 2H3UA 1T7OA 2H4TA 4EPHA 2FY2A 1NDBA 1Q6XA 2DEBA 1NDFA 1NM8A 2RCUA 2H3WA 1T7QA 2FYOA 1S5OA 2FW3A 1NDIA 2H3PA 4EP9A
chains in the Genus database with same CATH superfamily
2II5A 5DUAA 1Q23A 2VSQA 1E2OA 1Q6XA 1EADA 1EACA 3U9BA 1SCZA 5DU9A 5KJSA 3B2SA 3FOTA 5KJTA 2H3WA 1T7QA 2FYOA 2ZBAA 2JGPA 2RKVA 2FY4A 2II3A 2E1VA 4EYWA 1NOCB 1QCAA 2H3UA 1CIAA 3L60A 4G22A 1DPBA 2FY2A 5T3EA 1EAAA 1NDBA 1NDFA 2IHWA 2XHGA 4KECA 5KJVA 2RCUA 4G0BA 2E1UA 1CLAA 5FALA 1NDIA 4JN5A 1T7NA 1C4TA 4CLAA 4JN3A 2BGHA 1XMCA 4HVMA 1T7OA 2H4TA 4EPHA 1XL8A 1EABA 2DEBA 1Q9JA 3FP0A 1DPDA 2E1TA 2RKTA 1S5OA 2II4A 3CLAA 5FANA 5KJWA 2H3PA 4N72A 4EP9A 1T1UA 1EAEA 2FY5A 2FY3A 1L5AA 5KJUA 2I9DA 1PD5A 2CLAA 1XMDA 2XR7A 3U9FA 1NM8A 1DPCA 1EAFA 4KE4A 3B30A 2FW3A 4G2MA 3MAEA 1XL7A
chains in the Genus database with same CATH topology
1T1UA 4JN5A 1T7NA 2FY4A 2FY5A 2FY3A 4EYWA 4JN3A 2H3UA 4HVMA 1T7OA 5DUAA 2H4TA 4EPHA 1L5AA 2VSQA 2FY2A 5T3EA 1NDBA 1Q6XA 2DEBA 1NDFA 2XHGA 1Q9JA 3FP0A 5DU9A 1NM8A 4EP9A 2RCUA 3FOTA 2H3WA 1T7QA 2FYOA 1S5OA 2FW3A 1NDIA 2H3PA 2JGPA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1T1U A;  1T7N A;  2FY4 A;  2FY5 A;  2FY3 A;  4EYW A;  2H3U A;  1T7O A;  2H4T A;  4EPH A;  2FY2 A;  1NDB A;  1Q6X A;  2DEB A;  1NDF A;  1NM8 A;  2RCU A;  2H3W A;  1T7Q A;  2FYO A;  1S5O A;  2FW3 A;  1NDI A;  2H3P A;  4EP9 A; 
#chains in the Genus database with same CATH topology
 2II5 A;  5DUA A;  1Q23 A;  2VSQ A;  1E2O A;  1Q6X A;  1EAD A;  1EAC A;  3U9B A;  1SCZ A;  5DU9 A;  5KJS A;  3B2S A;  3FOT A;  5KJT A;  2H3W A;  1T7Q A;  2FYO A;  2ZBA A;  2JGP A;  2RKV A;  2FY4 A;  2II3 A;  2E1V A;  4EYW A;  1NOC B;  1QCA A;  2H3U A;  1CIA A;  3L60 A;  4G22 A;  1DPB A;  2FY2 A;  5T3E A;  1EAA A;  1NDB A;  1NDF A;  2IHW A;  2XHG A;  4KEC A;  5KJV A;  2RCU A;  4G0B A;  2E1U A;  1CLA A;  5FAL A;  1NDI A;  4JN5 A;  1T7N A;  1C4T A;  4CLA A;  4JN3 A;  2BGH A;  1XMC A;  4HVM A;  1T7O A;  2H4T A;  4EPH A;  1XL8 A;  1EAB A;  2DEB A;  1Q9J A;  3FP0 A;  1DPD A;  2E1T A;  2RKT A;  1S5O A;  2II4 A;  3CLA A;  5FAN A;  5KJW A;  2H3P A;  4N72 A;  4EP9 A;  1T1U A;  1EAE A;  2FY5 A;  2FY3 A;  1L5A A;  5KJU A;  2I9D A;  1PD5 A;  2CLA A;  1XMD A;  2XR7 A;  3U9F A;  1NM8 A;  1DPC A;  1EAF A;  4KE4 A;  3B30 A;  2FW3 A;  4G2M A;  3MAE A;  1XL7 A; 
#chains in the Genus database with same CATH homology
 1T1U A;  4JN5 A;  1T7N A;  2FY4 A;  2FY5 A;  2FY3 A;  4EYW A;  4JN3 A;  2H3U A;  4HVM A;  1T7O A;  5DUA A;  2H4T A;  4EPH A;  1L5A A;  2VSQ A;  2FY2 A;  5T3E A;  1NDB A;  1Q6X A;  2DEB A;  1NDF A;  2XHG A;  1Q9J A;  3FP0 A;  5DU9 A;  1NM8 A;  4EP9 A;  2RCU A;  3FOT A;  2H3W A;  1T7Q A;  2FYO A;  1S5O A;  2FW3 A;  1NDI A;  2H3P A;  2JGP A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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