2H3WA

Crystal structure of the s554a/m564g mutant of murine carnitine acetyltransferase in complex with hexanoylcarnitine and coa
Total Genus 218
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
218
sequence length
599
structure length
599
Chain Sequence
b'SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTAQVPAKTDCVGFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords carnitine acetyltransferase
publication title Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
pubmed doi rcsb
source organism Mus musculus
molecule tags Transferase
total genus 218
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2006-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3wA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3wA02
2H4TA 1NM8A 2FY4A 4EPHA 2FW3A 1NDBA 2DEBA 2FY5A 1NDFA 1NDIA 1S5OA 1T7NA 4EYWA 2FY3A 2H3PA 2RCUA 1T1UA 1T7QA 2H3UA 2H3WA 1T7OA 2FY2A 4EP9A 2FYOA 1Q6XA
chains in the Genus database with same CATH superfamily
2RKTA 1XMDA 2XR7A 5KJUA 2FW3A 1SCZA 5FANA 2II3A 3B30A 1Q9JA 1T7NA 1L5AA 2H3PA 1CIAA 1XL8A 1T7QA 3MAEA 1XL7A 1CLAA 1EACA 1NOCB 1C4TA 1EADA 1DPBA 4G0BA 4HVMA 2I9DA 3U9FA 1Q23A 3CLAA 4KE4A 4EYWA 1EAEA 2H3UA 2H3WA 1T7OA 5DUAA 3B2SA 2ZBAA 2BGHA 1DPDA 4JN5A 2H4TA 4CLAA 4G2MA 2FY4A 1XMCA 2IHWA 2E1UA 1EAFA 3FP0A 4EPHA 5KJTA 2E1TA 2II5A 5FALA 2RKVA 4JN3A 1PD5A 2CLAA 3FOTA 2II4A 1S5OA 1EAAA 5KJVA 2RCUA 1T1UA 3U9BA 5KJSA 4EP9A 2FYOA 1Q6XA 1EABA 5DU9A 5T3EA 1NM8A 4G22A 2XHGA 1NDBA 2DEBA 1QCAA 2FY5A 1NDFA 2VSQA 5KJWA 2JGPA 1DPCA 1E2OA 1NDIA 4N72A 2FY3A 2FY2A 4KECA 3L60A 2E1VA
chains in the Genus database with same CATH topology
5DU9A 4JN5A 2H4TA 5T3EA 1NM8A 4HVMA 2FY4A 3FP0A 2FW3A 4EPHA 2XHGA 1NDBA 2DEBA 2FY5A 1NDFA 2VSQA 4JN3A 2JGPA 3FOTA 1NDIA 1Q9JA 1S5OA 1T7NA 4EYWA 2FY3A 1L5AA 2H3PA 2RCUA 1T1UA 1T7QA 2H3UA 2H3WA 1T7OA 2FY2A 4EP9A 2FYOA 5DUAA 1Q6XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H4T A;  1NM8 A;  2FY4 A;  4EPH A;  2FW3 A;  1NDB A;  2DEB A;  2FY5 A;  1NDF A;  1NDI A;  1S5O A;  1T7N A;  4EYW A;  2FY3 A;  2H3P A;  2RCU A;  1T1U A;  1T7Q A;  2H3U A;  2H3W A;  1T7O A;  2FY2 A;  4EP9 A;  2FYO A;  1Q6X A; 
#chains in the Genus database with same CATH topology
 2RKT A;  1XMD A;  2XR7 A;  5KJU A;  2FW3 A;  1SCZ A;  5FAN A;  2II3 A;  3B30 A;  1Q9J A;  1T7N A;  1L5A A;  2H3P A;  1CIA A;  1XL8 A;  1T7Q A;  3MAE A;  1XL7 A;  1CLA A;  1EAC A;  1NOC B;  1C4T A;  1EAD A;  1DPB A;  4G0B A;  4HVM A;  2I9D A;  3U9F A;  1Q23 A;  3CLA A;  4KE4 A;  4EYW A;  1EAE A;  2H3U A;  2H3W A;  1T7O A;  5DUA A;  3B2S A;  2ZBA A;  2BGH A;  1DPD A;  4JN5 A;  2H4T A;  4CLA A;  4G2M A;  2FY4 A;  1XMC A;  2IHW A;  2E1U A;  1EAF A;  3FP0 A;  4EPH A;  5KJT A;  2E1T A;  2II5 A;  5FAL A;  2RKV A;  4JN3 A;  1PD5 A;  2CLA A;  3FOT A;  2II4 A;  1S5O A;  1EAA A;  5KJV A;  2RCU A;  1T1U A;  3U9B A;  5KJS A;  4EP9 A;  2FYO A;  1Q6X A;  1EAB A;  5DU9 A;  5T3E A;  1NM8 A;  4G22 A;  2XHG A;  1NDB A;  2DEB A;  1QCA A;  2FY5 A;  1NDF A;  2VSQ A;  5KJW A;  2JGP A;  1DPC A;  1E2O A;  1NDI A;  4N72 A;  2FY3 A;  2FY2 A;  4KEC A;  3L60 A;  2E1V A; 
#chains in the Genus database with same CATH homology
 5DU9 A;  4JN5 A;  2H4T A;  5T3E A;  1NM8 A;  4HVM A;  2FY4 A;  3FP0 A;  2FW3 A;  4EPH A;  2XHG A;  1NDB A;  2DEB A;  2FY5 A;  1NDF A;  2VSQ A;  4JN3 A;  2JGP A;  3FOT A;  1NDI A;  1Q9J A;  1S5O A;  1T7N A;  4EYW A;  2FY3 A;  1L5A A;  2H3P A;  2RCU A;  1T1U A;  1T7Q A;  2H3U A;  2H3W A;  1T7O A;  2FY2 A;  4EP9 A;  2FYO A;  5DUA A;  1Q6X A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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