2H3WA

Crystal structure of the s554a/m564g mutant of murine carnitine acetyltransferase in complex with hexanoylcarnitine and coa
Total Genus 218
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
218
sequence length
599
structure length
599
Chain Sequence
b'SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTAQVPAKTDCVGFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

publication title Crystal structures of murine carnitine acetyltransferase in ternary complexes with its substrates
pubmed doi rcsb
molecule keywords carnitine acetyltransferase
source organism Mus musculus
molecule tags Transferase
total genus 218
structure length 599
sequence length 599
chains with identical sequence B
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2006-05-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3wA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 2h3wA02
1NDIA 4EP9A 2FY5A 1S5OA 1T7QA 2FY2A 2H3WA 2H3PA 1T7OA 1NDBA 2H4TA 1T1UA 1NM8A 2FW3A 1T7NA 1Q6XA 2FY3A 1NDFA 2FYOA 2H3UA 2RCUA 4EYWA 2FY4A 4EPHA 2DEBA
chains in the Genus database with same CATH superfamily
2II3A 5KJUA 2RKTA 4JN5A 2CLAA 1S5OA 3L60A 2H3WA 5KJSA 4G0BA 4G22A 1QCAA 2RKVA 4G2MA 1T1UA 2JGPA 3MAEA 1DPBA 2FY4A 5FANA 3CLAA 5DUAA 2XHGA 4JN3A 1EABA 5KJTA 4KE4A 2VSQA 1T7OA 1XL7A 1EACA 1NM8A 1DPDA 2XR7A 2FW3A 1NDFA 2FY3A 5DU9A 2RCUA 4EYWA 4KECA 5KJWA 2E1UA 1NDIA 3FOTA 2E1TA 1Q9JA 4HVMA 1T7QA 4N72A 1EAEA 2II4A 1PD5A 1NOCB 1L5AA 1NDBA 1DPCA 1E2OA 1Q6XA 1T7NA 2IHWA 1EADA 5T3EA 1EAFA 1C4TA 3U9FA 1CIAA 3U9BA 2DEBA 3B30A 4EP9A 2BGHA 1XMCA 2FY5A 2ZBAA 2FY2A 3FP0A 2H3PA 2E1VA 1CLAA 2II5A 3B2SA 1XL8A 2H4TA 1SCZA 1XMDA 2I9DA 5KJVA 2H3UA 1EAAA 2FYOA 4CLAA 1Q23A 4EPHA 5FALA
chains in the Genus database with same CATH topology
1NDIA 5DUAA 4EP9A 2XHGA 3FOTA 4JN5A 1Q9JA 4JN3A 2FY5A 1S5OA 4HVMA 1T7QA 2FY2A 2H3WA 2VSQA 3FP0A 2H3PA 1T7OA 1L5AA 1NDBA 2H4TA 1T1UA 1NM8A 2FW3A 1T7NA 1Q6XA 2FY3A 1NDFA 2FYOA 2H3UA 5T3EA 2JGPA 5DU9A 2RCUA 4EYWA 2FY4A 4EPHA 2DEBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1NDI A;  4EP9 A;  2FY5 A;  1S5O A;  1T7Q A;  2FY2 A;  2H3W A;  2H3P A;  1T7O A;  1NDB A;  2H4T A;  1T1U A;  1NM8 A;  2FW3 A;  1T7N A;  1Q6X A;  2FY3 A;  1NDF A;  2FYO A;  2H3U A;  2RCU A;  4EYW A;  2FY4 A;  4EPH A;  2DEB A; 
#chains in the Genus database with same CATH topology
 2II3 A;  5KJU A;  2RKT A;  4JN5 A;  2CLA A;  1S5O A;  3L60 A;  2H3W A;  5KJS A;  4G0B A;  4G22 A;  1QCA A;  2RKV A;  4G2M A;  1T1U A;  2JGP A;  3MAE A;  1DPB A;  2FY4 A;  5FAN A;  3CLA A;  5DUA A;  2XHG A;  4JN3 A;  1EAB A;  5KJT A;  4KE4 A;  2VSQ A;  1T7O A;  1XL7 A;  1EAC A;  1NM8 A;  1DPD A;  2XR7 A;  2FW3 A;  1NDF A;  2FY3 A;  5DU9 A;  2RCU A;  4EYW A;  4KEC A;  5KJW A;  2E1U A;  1NDI A;  3FOT A;  2E1T A;  1Q9J A;  4HVM A;  1T7Q A;  4N72 A;  1EAE A;  2II4 A;  1PD5 A;  1NOC B;  1L5A A;  1NDB A;  1DPC A;  1E2O A;  1Q6X A;  1T7N A;  2IHW A;  1EAD A;  5T3E A;  1EAF A;  1C4T A;  3U9F A;  1CIA A;  3U9B A;  2DEB A;  3B30 A;  4EP9 A;  2BGH A;  1XMC A;  2FY5 A;  2ZBA A;  2FY2 A;  3FP0 A;  2H3P A;  2E1V A;  1CLA A;  2II5 A;  3B2S A;  1XL8 A;  2H4T A;  1SCZ A;  1XMD A;  2I9D A;  5KJV A;  2H3U A;  1EAA A;  2FYO A;  4CLA A;  1Q23 A;  4EPH A;  5FAL A; 
#chains in the Genus database with same CATH homology
 1NDI A;  5DUA A;  4EP9 A;  2XHG A;  3FOT A;  4JN5 A;  1Q9J A;  4JN3 A;  2FY5 A;  1S5O A;  4HVM A;  1T7Q A;  2FY2 A;  2H3W A;  2VSQ A;  3FP0 A;  2H3P A;  1T7O A;  1L5A A;  1NDB A;  2H4T A;  1T1U A;  1NM8 A;  2FW3 A;  1T7N A;  1Q6X A;  2FY3 A;  1NDF A;  2FYO A;  2H3U A;  5T3E A;  2JGP A;  5DU9 A;  2RCU A;  4EYW A;  2FY4 A;  4EPH A;  2DEB A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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