3MAEA

Crystal structure of probable dihydrolipoamide acetyltransferase from listeria monocytogenes 4b f2365
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
234
structure length
234
Chain Sequence
AAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENTALY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamid
publication title CRYSTAL STRUCTURE OF A CATALYTIC DOMAIN OF DIHYDROLIPOAMIDE ACETYLTRANSFERASE FROM LISTERIA MONOCYTOGENES 4b F2365
rcsb
source organism Listeria monocytogenes
total genus 64
structure length 234
sequence length 234
chains with identical sequence B, C
ec nomenclature ec 2.3.1.-:
pdb deposition date 2010-03-23
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 3maeA00
2JGPA 1EACA 1XL7A 2VSQA 1PD5A 3L60A 4G2MA 2I9DA 3FP0A 5FALA 1CLAA 5KJSA 1C4TA 1EAEA 2E1TA 2E1UA 4G22A 1XL8A 5DU9A 3U9BA 2E1VA 2RKTA 4G0BA 3CLAA 5KJVA 3MAEA 5T3EA 1EAAA 1XMCA 4KE4A 5KJWA 3B30A 1DPDA 5DUAA 3B2SA 4CLAA 1E2OA 1EADA 2CLAA 5KJUA 4JN5A 2II3A 2XR7A 1SCZA 2BGHA 1L5AA 4KECA 1EABA 2II5A 1QCAA 1XMDA 3U9FA 2IHWA 5KJTA 1DPCA 2II4A 4JN3A 4N72A 2XHGA 4HVMA 2ZBAA 1Q9JA 1EAFA 1NOCB 1DPBA 1Q23A 5FANA 2RKVA 1CIAA 3FOTA
chains in the Genus database with same CATH superfamily
1XL7A 1T7NA 2VSQA 1C4TA 3U9BA 2E1VA 1T7QA 3MAEA 1XMCA 2DEBA 1DPDA 2H4TA 1E2OA 2FY2A 1EABA 1XMDA 2IHWA 1DPCA 2FY4A 5FANA 1T7OA 1CIAA 2FY3A 2H3PA 4EP9A 4G2MA 3FP0A 1CLAA 4EYWA 5DU9A 2RKTA 1EAAA 2FW3A 5KJWA 3B30A 1NDIA 4JN5A 1NDBA 2H3WA 2II5A 1QCAA 1S5OA 2H3UA 2II4A 1NOCB 4EPHA 1DPBA 3FOTA 2JGPA 5KJSA 1EACA 1PD5A 2I9DA 1EAEA 2E1TA 2E1UA 3CLAA 2FY5A 5KJVA 5T3EA 1EADA 2CLAA 5KJUA 1L5AA 1SCZA 2FYOA 3U9FA 4N72A 1NM8A 2XHGA 2ZBAA 1Q9JA 1Q6XA 1Q23A 2RKVA 2RCUA 1T1UA 3L60A 5FALA 4G22A 1XL8A 4G0BA 4KE4A 5DUAA 3B2SA 4CLAA 2II3A 2XR7A 2BGHA 4KECA 1NDFA 5KJTA 4JN3A 4HVMA 1EAFA
chains in the Genus database with same CATH topology
2JGPA 1EACA 1XL7A 2VSQA 1PD5A 3L60A 4G2MA 2I9DA 3FP0A 5FALA 1CLAA 5KJSA 1C4TA 1EAEA 2E1TA 2E1UA 4G22A 1XL8A 5DU9A 3U9BA 2E1VA 2RKTA 4G0BA 3CLAA 5KJVA 3MAEA 5T3EA 1EAAA 1XMCA 4KE4A 5KJWA 3B30A 1DPDA 5DUAA 3B2SA 4CLAA 1E2OA 1EADA 2CLAA 5KJUA 4JN5A 2II3A 2XR7A 1SCZA 2BGHA 1L5AA 4KECA 1EABA 2II5A 1QCAA 1XMDA 3U9FA 2IHWA 5KJTA 1DPCA 2II4A 4JN3A 4N72A 2XHGA 4HVMA 2ZBAA 1Q9JA 1EAFA 1NOCB 1DPBA 1Q23A 5FANA 2RKVA 1CIAA 3FOTA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2JGP A;  1EAC A;  1XL7 A;  2VSQ A;  1PD5 A;  3L60 A;  4G2M A;  2I9D A;  3FP0 A;  5FAL A;  1CLA A;  5KJS A;  1C4T A;  1EAE A;  2E1T A;  2E1U A;  4G22 A;  1XL8 A;  5DU9 A;  3U9B A;  2E1V A;  2RKT A;  4G0B A;  3CLA A;  5KJV A;  3MAE A;  5T3E A;  1EAA A;  1XMC A;  4KE4 A;  5KJW A;  3B30 A;  1DPD A;  5DUA A;  3B2S A;  4CLA A;  1E2O A;  1EAD A;  2CLA A;  5KJU A;  4JN5 A;  2II3 A;  2XR7 A;  1SCZ A;  2BGH A;  1L5A A;  4KEC A;  1EAB A;  2II5 A;  1QCA A;  1XMD A;  3U9F A;  2IHW A;  5KJT A;  1DPC A;  2II4 A;  4JN3 A;  4N72 A;  2XHG A;  4HVM A;  2ZBA A;  1Q9J A;  1EAF A;  1NOC B;  1DPB A;  1Q23 A;  5FAN A;  2RKV A;  1CIA A;  3FOT A; 
#chains in the Genus database with same CATH topology
 1XL7 A;  1T7N A;  2VSQ A;  1C4T A;  3U9B A;  2E1V A;  1T7Q A;  3MAE A;  1XMC A;  2DEB A;  1DPD A;  2H4T A;  1E2O A;  2FY2 A;  1EAB A;  1XMD A;  2IHW A;  1DPC A;  2FY4 A;  5FAN A;  1T7O A;  1CIA A;  2FY3 A;  2H3P A;  4EP9 A;  4G2M A;  3FP0 A;  1CLA A;  4EYW A;  5DU9 A;  2RKT A;  1EAA A;  2FW3 A;  5KJW A;  3B30 A;  1NDI A;  4JN5 A;  1NDB A;  2H3W A;  2II5 A;  1QCA A;  1S5O A;  2H3U A;  2II4 A;  1NOC B;  4EPH A;  1DPB A;  3FOT A;  2JGP A;  5KJS A;  1EAC A;  1PD5 A;  2I9D A;  1EAE A;  2E1T A;  2E1U A;  3CLA A;  2FY5 A;  5KJV A;  5T3E A;  1EAD A;  2CLA A;  5KJU A;  1L5A A;  1SCZ A;  2FYO A;  3U9F A;  4N72 A;  1NM8 A;  2XHG A;  2ZBA A;  1Q9J A;  1Q6X A;  1Q23 A;  2RKV A;  2RCU A;  1T1U A;  3L60 A;  5FAL A;  4G22 A;  1XL8 A;  4G0B A;  4KE4 A;  5DUA A;  3B2S A;  4CLA A;  2II3 A;  2XR7 A;  2BGH A;  4KEC A;  1NDF A;  5KJT A;  4JN3 A;  4HVM A;  1EAF A; 
#chains in the Genus database with same CATH homology
 2JGP A;  1EAC A;  1XL7 A;  2VSQ A;  1PD5 A;  3L60 A;  4G2M A;  2I9D A;  3FP0 A;  5FAL A;  1CLA A;  5KJS A;  1C4T A;  1EAE A;  2E1T A;  2E1U A;  4G22 A;  1XL8 A;  5DU9 A;  3U9B A;  2E1V A;  2RKT A;  4G0B A;  3CLA A;  5KJV A;  3MAE A;  5T3E A;  1EAA A;  1XMC A;  4KE4 A;  5KJW A;  3B30 A;  1DPD A;  5DUA A;  3B2S A;  4CLA A;  1E2O A;  1EAD A;  2CLA A;  5KJU A;  4JN5 A;  2II3 A;  2XR7 A;  1SCZ A;  2BGH A;  1L5A A;  4KEC A;  1EAB A;  2II5 A;  1QCA A;  1XMD A;  3U9F A;  2IHW A;  5KJT A;  1DPC A;  2II4 A;  4JN3 A;  4N72 A;  2XHG A;  4HVM A;  2ZBA A;  1Q9J A;  1EAF A;  1NOC B;  1DPB A;  1Q23 A;  5FAN A;  2RKV A;  1CIA A;  3FOT A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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