3MAEA

Crystal structure of probable dihydrolipoamide acetyltransferase from listeria monocytogenes 4b f2365
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
234
structure length
234
Chain Sequence
AAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENTALY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords 2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamid
publication title CRYSTAL STRUCTURE OF A CATALYTIC DOMAIN OF DIHYDROLIPOAMIDE ACETYLTRANSFERASE FROM LISTERIA MONOCYTOGENES 4b F2365
rcsb
source organism Listeria monocytogenes
molecule tags Transferase
total genus 64
structure length 234
sequence length 234
chains with identical sequence B, C
ec nomenclature ec 2.3.1.-:
pdb deposition date 2010-03-23
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 3maeA00
3FP0A 5KJSA 1EAEA 2VSQA 3B2SA 1CIAA 3U9BA 2JGPA 2E1UA 1DPDA 2RKTA 5KJUA 5DUAA 2XHGA 1NOCB 1DPBA 2I9DA 4G0BA 3FOTA 1EACA 1XL8A 4KECA 1Q9JA 4G22A 3CLAA 3L60A 2IHWA 5KJVA 1XMCA 3MAEA 4CLAA 2E1VA 5FANA 1EAAA 1L5AA 5T3EA 5KJTA 1EADA 1EABA 1QCAA 4G2MA 5KJWA 1PD5A 2II4A 1SCZA 2RKVA 1XMDA 4JN5A 4N72A 5FALA 1CLAA 1XL7A 2BGHA 1Q23A 3B30A 1EAFA 1C4TA 3U9FA 2CLAA 4JN3A 2XR7A 4KE4A 2E1TA 2II3A 2II5A 5DU9A 4HVMA 1E2OA 2ZBAA 1DPCA
chains in the Genus database with same CATH superfamily
1CIAA 2JGPA 1DPDA 2FY4A 4EPHA 2IHWA 1T7NA 1NDIA 4EP9A 2H3PA 2H3UA 3U9FA 2CLAA 2E1TA 2ZBAA 1DPCA 3FP0A 1S5OA 2RCUA 2E1UA 2XHGA 4KECA 5KJVA 1XMCA 3MAEA 2FY2A 2FY5A 1L5AA 5T3EA 2H4TA 1QCAA 2II4A 1SCZA 1XMDA 1CLAA 1XL7A 1NM8A 1C4TA 2XR7A 1T1UA 2II5A 5DU9A 4EYWA 1EAEA 2VSQA 3B2SA 2RKTA 5KJUA 5DUAA 1DPBA 2I9DA 2FW3A 3FOTA 1EACA 1XL8A 1Q9JA 4G22A 3L60A 2DEBA 2E1VA 5KJTA 1T7QA 1EADA 4G2MA 4N72A 2BGHA 1Q23A 1Q6XA 3B30A 4JN3A 2II3A 2FY3A 5KJSA 3U9BA 1NOCB 4G0BA 1NDBA 3CLAA 4CLAA 5FANA 1EAAA 2H3WA 1EABA 5KJWA 1PD5A 4JN5A 5FALA 2RKVA 2FYOA 1T7OA 1EAFA 4KE4A 1NDFA 4HVMA 1E2OA
chains in the Genus database with same CATH topology
3FP0A 5KJSA 1EAEA 2VSQA 3B2SA 1CIAA 3U9BA 2JGPA 2E1UA 1DPDA 2RKTA 5KJUA 5DUAA 2XHGA 1NOCB 1DPBA 2I9DA 4G0BA 3FOTA 1EACA 1XL8A 4KECA 1Q9JA 4G22A 3CLAA 3L60A 2IHWA 5KJVA 1XMCA 3MAEA 4CLAA 2E1VA 5FANA 1EAAA 1L5AA 5T3EA 5KJTA 1EADA 1EABA 1QCAA 4G2MA 5KJWA 1PD5A 2II4A 1SCZA 2RKVA 1XMDA 4JN5A 4N72A 5FALA 1CLAA 1XL7A 2BGHA 1Q23A 3B30A 1EAFA 1C4TA 3U9FA 2CLAA 4JN3A 2XR7A 4KE4A 2E1TA 2II3A 2II5A 5DU9A 4HVMA 1E2OA 2ZBAA 1DPCA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FP0 A;  5KJS A;  1EAE A;  2VSQ A;  3B2S A;  1CIA A;  3U9B A;  2JGP A;  2E1U A;  1DPD A;  2RKT A;  5KJU A;  5DUA A;  2XHG A;  1NOC B;  1DPB A;  2I9D A;  4G0B A;  3FOT A;  1EAC A;  1XL8 A;  4KEC A;  1Q9J A;  4G22 A;  3CLA A;  3L60 A;  2IHW A;  5KJV A;  1XMC A;  3MAE A;  4CLA A;  2E1V A;  5FAN A;  1EAA A;  1L5A A;  5T3E A;  5KJT A;  1EAD A;  1EAB A;  1QCA A;  4G2M A;  5KJW A;  1PD5 A;  2II4 A;  1SCZ A;  2RKV A;  1XMD A;  4JN5 A;  4N72 A;  5FAL A;  1CLA A;  1XL7 A;  2BGH A;  1Q23 A;  3B30 A;  1EAF A;  1C4T A;  3U9F A;  2CLA A;  4JN3 A;  2XR7 A;  4KE4 A;  2E1T A;  2II3 A;  2II5 A;  5DU9 A;  4HVM A;  1E2O A;  2ZBA A;  1DPC A; 
#chains in the Genus database with same CATH topology
 1CIA A;  2JGP A;  1DPD A;  2FY4 A;  4EPH A;  2IHW A;  1T7N A;  1NDI A;  4EP9 A;  2H3P A;  2H3U A;  3U9F A;  2CLA A;  2E1T A;  2ZBA A;  1DPC A;  3FP0 A;  1S5O A;  2RCU A;  2E1U A;  2XHG A;  4KEC A;  5KJV A;  1XMC A;  3MAE A;  2FY2 A;  2FY5 A;  1L5A A;  5T3E A;  2H4T A;  1QCA A;  2II4 A;  1SCZ A;  1XMD A;  1CLA A;  1XL7 A;  1NM8 A;  1C4T A;  2XR7 A;  1T1U A;  2II5 A;  5DU9 A;  4EYW A;  1EAE A;  2VSQ A;  3B2S A;  2RKT A;  5KJU A;  5DUA A;  1DPB A;  2I9D A;  2FW3 A;  3FOT A;  1EAC A;  1XL8 A;  1Q9J A;  4G22 A;  3L60 A;  2DEB A;  2E1V A;  5KJT A;  1T7Q A;  1EAD A;  4G2M A;  4N72 A;  2BGH A;  1Q23 A;  1Q6X A;  3B30 A;  4JN3 A;  2II3 A;  2FY3 A;  5KJS A;  3U9B A;  1NOC B;  4G0B A;  1NDB A;  3CLA A;  4CLA A;  5FAN A;  1EAA A;  2H3W A;  1EAB A;  5KJW A;  1PD5 A;  4JN5 A;  5FAL A;  2RKV A;  2FYO A;  1T7O A;  1EAF A;  4KE4 A;  1NDF A;  4HVM A;  1E2O A; 
#chains in the Genus database with same CATH homology
 3FP0 A;  5KJS A;  1EAE A;  2VSQ A;  3B2S A;  1CIA A;  3U9B A;  2JGP A;  2E1U A;  1DPD A;  2RKT A;  5KJU A;  5DUA A;  2XHG A;  1NOC B;  1DPB A;  2I9D A;  4G0B A;  3FOT A;  1EAC A;  1XL8 A;  4KEC A;  1Q9J A;  4G22 A;  3CLA A;  3L60 A;  2IHW A;  5KJV A;  1XMC A;  3MAE A;  4CLA A;  2E1V A;  5FAN A;  1EAA A;  1L5A A;  5T3E A;  5KJT A;  1EAD A;  1EAB A;  1QCA A;  4G2M A;  5KJW A;  1PD5 A;  2II4 A;  1SCZ A;  2RKV A;  1XMD A;  4JN5 A;  4N72 A;  5FAL A;  1CLA A;  1XL7 A;  2BGH A;  1Q23 A;  3B30 A;  1EAF A;  1C4T A;  3U9F A;  2CLA A;  4JN3 A;  2XR7 A;  4KE4 A;  2E1T A;  2II3 A;  2II5 A;  5DU9 A;  4HVM A;  1E2O A;  2ZBA A;  1DPC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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