3MAEA

Crystal structure of probable dihydrolipoamide acetyltransferase from listeria monocytogenes 4b f2365
Total Genus 64
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
64
sequence length
234
structure length
234
Chain Sequence
AAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTWAGDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKENTALY
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords 2-oxoisovalerate dehydrogenase E2 component, dihydrolipoamid
publication title CRYSTAL STRUCTURE OF A CATALYTIC DOMAIN OF DIHYDROLIPOAMIDE ACETYLTRANSFERASE FROM LISTERIA MONOCYTOGENES 4b F2365
rcsb
source organism Listeria monocytogenes
total genus 64
structure length 234
sequence length 234
chains with identical sequence B, C
ec nomenclature ec 2.3.1.-:
pdb deposition date 2010-03-23
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 3maeA00
4G22A 2E1TA 3B2SA 5KJWA 1EACA 4G2MA 2RKTA 4KECA 5KJVA 4KE4A 2JGPA 1DPCA 1C4TA 1XMDA 3FP0A 1DPDA 2II4A 1Q23A 3MAEA 3B30A 1EAEA 3FOTA 4N72A 1QCAA 1E2OA 4JN3A 5FALA 2II5A 1Q9JA 1XL7A 2VSQA 1L5AA 4CLAA 2CLAA 1SCZA 2ZBAA 5DUAA 2II3A 2RKVA 4HVMA 3U9FA 5KJSA 1EADA 2E1UA 1NOCB 2E1VA 5DU9A 1EABA 2XR7A 3L60A 4JN5A 1PD5A 1DPBA 1XMCA 5KJUA 2I9DA 4G0BA 5T3EA 3U9BA 2IHWA 3CLAA 5FANA 5KJTA 2XHGA 1CLAA 1EAFA 2BGHA 1EAAA 1CIAA 1XL8A
chains in the Genus database with same CATH superfamily
4G22A 2E1TA 4KE4A 1C4TA 1XMDA 1EAEA 3FOTA 4JN3A 1XL7A 2FY2A 2VSQA 4CLAA 2CLAA 1EABA 3L60A 4JN5A 5KJUA 4G0BA 3CLAA 2RCUA 5KJTA 1CLAA 1PD5A 2RKVA 1EACA 5KJVA 2JGPA 3FP0A 1DPDA 2II4A 2FY4A 1Q6XA 5DUAA 1NDFA 2II3A 2E1UA 1NOCB 5DU9A 1DPBA 2I9DA 2XHGA 1NM8A 1CIAA 3B2SA 2FW3A 4G2MA 2RKTA 1T7NA 3B30A 1QCAA 1NDBA 1S5OA 5FALA 2II5A 1Q9JA 1T7OA 2FY3A 1SCZA 4EYWA 4HVMA 3U9FA 1EADA 1NDIA 1XMCA 5T3EA 2FY5A 1EAFA 1EAAA 4KECA 2H4TA 5KJWA 1DPCA 2H3UA 2FYOA 4EP9A 1Q23A 2H3PA 3MAEA 4N72A 1E2OA 1L5AA 2DEBA 2ZBAA 5KJSA 4EPHA 2H3WA 1T7QA 2E1VA 2XR7A 3U9BA 2IHWA 1T1UA 5FANA 2BGHA 1XL8A
chains in the Genus database with same CATH topology
4G22A 2E1TA 3B2SA 5KJWA 1EACA 4G2MA 2RKTA 4KECA 5KJVA 4KE4A 2JGPA 1DPCA 1C4TA 1XMDA 3FP0A 1DPDA 2II4A 1Q23A 3MAEA 3B30A 1EAEA 3FOTA 4N72A 1QCAA 1E2OA 4JN3A 5FALA 2II5A 1Q9JA 1XL7A 2VSQA 1L5AA 4CLAA 2CLAA 1SCZA 2ZBAA 5DUAA 2II3A 2RKVA 4HVMA 3U9FA 5KJSA 1EADA 2E1UA 1NOCB 2E1VA 5DU9A 1EABA 2XR7A 3L60A 4JN5A 1PD5A 1DPBA 1XMCA 5KJUA 2I9DA 4G0BA 5T3EA 3U9BA 2IHWA 3CLAA 5FANA 5KJTA 2XHGA 1CLAA 1EAFA 2BGHA 1EAAA 1CIAA 1XL8A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4G22 A;  2E1T A;  3B2S A;  5KJW A;  1EAC A;  4G2M A;  2RKT A;  4KEC A;  5KJV A;  4KE4 A;  2JGP A;  1DPC A;  1C4T A;  1XMD A;  3FP0 A;  1DPD A;  2II4 A;  1Q23 A;  3MAE A;  3B30 A;  1EAE A;  3FOT A;  4N72 A;  1QCA A;  1E2O A;  4JN3 A;  5FAL A;  2II5 A;  1Q9J A;  1XL7 A;  2VSQ A;  1L5A A;  4CLA A;  2CLA A;  1SCZ A;  2ZBA A;  5DUA A;  2II3 A;  2RKV A;  4HVM A;  3U9F A;  5KJS A;  1EAD A;  2E1U A;  1NOC B;  2E1V A;  5DU9 A;  1EAB A;  2XR7 A;  3L60 A;  4JN5 A;  1PD5 A;  1DPB A;  1XMC A;  5KJU A;  2I9D A;  4G0B A;  5T3E A;  3U9B A;  2IHW A;  3CLA A;  5FAN A;  5KJT A;  2XHG A;  1CLA A;  1EAF A;  2BGH A;  1EAA A;  1CIA A;  1XL8 A; 
#chains in the Genus database with same CATH topology
 4G22 A;  2E1T A;  4KE4 A;  1C4T A;  1XMD A;  1EAE A;  3FOT A;  4JN3 A;  1XL7 A;  2FY2 A;  2VSQ A;  4CLA A;  2CLA A;  1EAB A;  3L60 A;  4JN5 A;  5KJU A;  4G0B A;  3CLA A;  2RCU A;  5KJT A;  1CLA A;  1PD5 A;  2RKV A;  1EAC A;  5KJV A;  2JGP A;  3FP0 A;  1DPD A;  2II4 A;  2FY4 A;  1Q6X A;  5DUA A;  1NDF A;  2II3 A;  2E1U A;  1NOC B;  5DU9 A;  1DPB A;  2I9D A;  2XHG A;  1NM8 A;  1CIA A;  3B2S A;  2FW3 A;  4G2M A;  2RKT A;  1T7N A;  3B30 A;  1QCA A;  1NDB A;  1S5O A;  5FAL A;  2II5 A;  1Q9J A;  1T7O A;  2FY3 A;  1SCZ A;  4EYW A;  4HVM A;  3U9F A;  1EAD A;  1NDI A;  1XMC A;  5T3E A;  2FY5 A;  1EAF A;  1EAA A;  4KEC A;  2H4T A;  5KJW A;  1DPC A;  2H3U A;  2FYO A;  4EP9 A;  1Q23 A;  2H3P A;  3MAE A;  4N72 A;  1E2O A;  1L5A A;  2DEB A;  2ZBA A;  5KJS A;  4EPH A;  2H3W A;  1T7Q A;  2E1V A;  2XR7 A;  3U9B A;  2IHW A;  1T1U A;  5FAN A;  2BGH A;  1XL8 A; 
#chains in the Genus database with same CATH homology
 4G22 A;  2E1T A;  3B2S A;  5KJW A;  1EAC A;  4G2M A;  2RKT A;  4KEC A;  5KJV A;  4KE4 A;  2JGP A;  1DPC A;  1C4T A;  1XMD A;  3FP0 A;  1DPD A;  2II4 A;  1Q23 A;  3MAE A;  3B30 A;  1EAE A;  3FOT A;  4N72 A;  1QCA A;  1E2O A;  4JN3 A;  5FAL A;  2II5 A;  1Q9J A;  1XL7 A;  2VSQ A;  1L5A A;  4CLA A;  2CLA A;  1SCZ A;  2ZBA A;  5DUA A;  2II3 A;  2RKV A;  4HVM A;  3U9F A;  5KJS A;  1EAD A;  2E1U A;  1NOC B;  2E1V A;  5DU9 A;  1EAB A;  2XR7 A;  3L60 A;  4JN5 A;  1PD5 A;  1DPB A;  1XMC A;  5KJU A;  2I9D A;  4G0B A;  5T3E A;  3U9B A;  2IHW A;  3CLA A;  5FAN A;  5KJT A;  2XHG A;  1CLA A;  1EAF A;  2BGH A;  1EAA A;  1CIA A;  1XL8 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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