5KJTA

Crystal structure of arabidopsis thaliana hct in complex with p-coumaroyl-coa
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
431
structure length
431
Chain Sequence
MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Transferase
molecule keywords Shikimate O-hydroxycinnamoyltransferase
publication title Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
pubmed doi rcsb
source organism Arabidopsis thaliana
total genus 119
structure length 431
sequence length 431
ec nomenclature ec 2.3.1.133: Shikimate O-hydroxycinnamoyltransferase.
pdb deposition date 2016-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjtA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjtA01
3FP0A 4G22A 1SCZA 4HVMA 2RKTA 1XMCA 3L60A 1XL7A 1CIAA 5KJUA 1L5AA 4G2MA 2XR7A 2IHWA 2XHGA 1XL8A 1EACA 4N72A 5DU9A 5T3EA 1EABA 3U9FA 1Q9JA 2ZBAA 2E1UA 5FANA 3CLAA 2E1VA 2E1TA 1E2OA 1EAFA 1EAAA 1DPCA 1Q23A 4G0BA 1EAEA 1DPBA 2RKVA 4CLAA 2VSQA 2JGPA 5KJVA 2BGHA 2II5A 3MAEA 4JN5A 1XMDA 3B2SA 3FOTA 1DPDA 1CLAA 5KJSA 1NOCB 4KECA 1C4TA 5DUAA 1QCAA 2I9DA 4KE4A 1EADA 2II3A 2CLAA 3B30A 5KJTA 4JN3A 3U9BA 5FALA 2II4A 1PD5A 5KJWA
chains in the Genus database with same CATH superfamily
2RKTA 1NDBA 2IHWA 1EACA 1Q9JA 2H3WA 2E1UA 5FANA 1NDIA 1DPCA 4EPHA 1EAEA 4EYWA 2H3PA 1T7OA 4JN5A 1XMDA 3FOTA 2RCUA 4KECA 2I9DA 4KE4A 1EADA 2CLAA 4JN3A 2II4A 5KJWA 1S5OA 4HVMA 3L60A 1XL7A 2FW3A 1L5AA 5DU9A 2H4TA 2E1VA 1EAFA 1T7QA 1Q23A 2DEBA 4CLAA 5KJVA 2II5A 1NM8A 2FY5A 2II3A 2FY3A 5KJTA 1PD5A 1SCZA 1XMCA 5KJUA 4G2MA 1XL8A 3U9FA 5T3EA 2ZBAA 3CLAA 4EP9A 1EAAA 4G0BA 1T1UA 2VSQA 3MAEA 1CLAA 5KJSA 1Q6XA 2FYOA 1T7NA 2FY4A 3FP0A 4G22A 1CIAA 2XR7A 4N72A 2XHGA 1EABA 2FY2A 2H3UA 1NDFA 2E1TA 1E2OA 1DPBA 2RKVA 2JGPA 2BGHA 3B2SA 1DPDA 1NOCB 1C4TA 5DUAA 1QCAA 3B30A 3U9BA 5FALA
chains in the Genus database with same CATH topology
3FP0A 4G22A 1SCZA 4HVMA 2RKTA 1XMCA 3L60A 1XL7A 1CIAA 5KJUA 1L5AA 4G2MA 2XR7A 2IHWA 2XHGA 1XL8A 1EACA 4N72A 5DU9A 5T3EA 1EABA 3U9FA 1Q9JA 2ZBAA 2E1UA 5FANA 3CLAA 2E1VA 2E1TA 1E2OA 1EAFA 1EAAA 1DPCA 1Q23A 4G0BA 1EAEA 1DPBA 2RKVA 4CLAA 2VSQA 2JGPA 5KJVA 2BGHA 2II5A 3MAEA 4JN5A 1XMDA 3B2SA 3FOTA 1DPDA 1CLAA 5KJSA 1NOCB 4KECA 1C4TA 5DUAA 1QCAA 2I9DA 4KE4A 1EADA 2II3A 2CLAA 3B30A 5KJTA 4JN3A 3U9BA 5FALA 2II4A 1PD5A 5KJWA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FP0 A;  4G22 A;  1SCZ A;  4HVM A;  2RKT A;  1XMC A;  3L60 A;  1XL7 A;  1CIA A;  5KJU A;  1L5A A;  4G2M A;  2XR7 A;  2IHW A;  2XHG A;  1XL8 A;  1EAC A;  4N72 A;  5DU9 A;  5T3E A;  1EAB A;  3U9F A;  1Q9J A;  2ZBA A;  2E1U A;  5FAN A;  3CLA A;  2E1V A;  2E1T A;  1E2O A;  1EAF A;  1EAA A;  1DPC A;  1Q23 A;  4G0B A;  1EAE A;  1DPB A;  2RKV A;  4CLA A;  2VSQ A;  2JGP A;  5KJV A;  2BGH A;  2II5 A;  3MAE A;  4JN5 A;  1XMD A;  3B2S A;  3FOT A;  1DPD A;  1CLA A;  5KJS A;  1NOC B;  4KEC A;  1C4T A;  5DUA A;  1QCA A;  2I9D A;  4KE4 A;  1EAD A;  2II3 A;  2CLA A;  3B30 A;  5KJT A;  4JN3 A;  3U9B A;  5FAL A;  2II4 A;  1PD5 A;  5KJW A; 
#chains in the Genus database with same CATH topology
 2RKT A;  1NDB A;  2IHW A;  1EAC A;  1Q9J A;  2H3W A;  2E1U A;  5FAN A;  1NDI A;  1DPC A;  4EPH A;  1EAE A;  4EYW A;  2H3P A;  1T7O A;  4JN5 A;  1XMD A;  3FOT A;  2RCU A;  4KEC A;  2I9D A;  4KE4 A;  1EAD A;  2CLA A;  4JN3 A;  2II4 A;  5KJW A;  1S5O A;  4HVM A;  3L60 A;  1XL7 A;  2FW3 A;  1L5A A;  5DU9 A;  2H4T A;  2E1V A;  1EAF A;  1T7Q A;  1Q23 A;  2DEB A;  4CLA A;  5KJV A;  2II5 A;  1NM8 A;  2FY5 A;  2II3 A;  2FY3 A;  5KJT A;  1PD5 A;  1SCZ A;  1XMC A;  5KJU A;  4G2M A;  1XL8 A;  3U9F A;  5T3E A;  2ZBA A;  3CLA A;  4EP9 A;  1EAA A;  4G0B A;  1T1U A;  2VSQ A;  3MAE A;  1CLA A;  5KJS A;  1Q6X A;  2FYO A;  1T7N A;  2FY4 A;  3FP0 A;  4G22 A;  1CIA A;  2XR7 A;  4N72 A;  2XHG A;  1EAB A;  2FY2 A;  2H3U A;  1NDF A;  2E1T A;  1E2O A;  1DPB A;  2RKV A;  2JGP A;  2BGH A;  3B2S A;  1DPD A;  1NOC B;  1C4T A;  5DUA A;  1QCA A;  3B30 A;  3U9B A;  5FAL A; 
#chains in the Genus database with same CATH homology
 3FP0 A;  4G22 A;  1SCZ A;  4HVM A;  2RKT A;  1XMC A;  3L60 A;  1XL7 A;  1CIA A;  5KJU A;  1L5A A;  4G2M A;  2XR7 A;  2IHW A;  2XHG A;  1XL8 A;  1EAC A;  4N72 A;  5DU9 A;  5T3E A;  1EAB A;  3U9F A;  1Q9J A;  2ZBA A;  2E1U A;  5FAN A;  3CLA A;  2E1V A;  2E1T A;  1E2O A;  1EAF A;  1EAA A;  1DPC A;  1Q23 A;  4G0B A;  1EAE A;  1DPB A;  2RKV A;  4CLA A;  2VSQ A;  2JGP A;  5KJV A;  2BGH A;  2II5 A;  3MAE A;  4JN5 A;  1XMD A;  3B2S A;  3FOT A;  1DPD A;  1CLA A;  5KJS A;  1NOC B;  4KEC A;  1C4T A;  5DUA A;  1QCA A;  2I9D A;  4KE4 A;  1EAD A;  2II3 A;  2CLA A;  3B30 A;  5KJT A;  4JN3 A;  3U9B A;  5FAL A;  2II4 A;  1PD5 A;  5KJW A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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