5KJTA

Crystal structure of arabidopsis thaliana hct in complex with p-coumaroyl-coa
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
431
structure length
431
Chain Sequence
MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
pubmed doi rcsb
molecule keywords Shikimate O-hydroxycinnamoyltransferase
source organism Arabidopsis thaliana
molecule tags Transferase
total genus 119
structure length 431
sequence length 431
ec nomenclature ec 2.3.1.133: Shikimate O-hydroxycinnamoyltransferase.
pdb deposition date 2016-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjtA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjtA01
1EAAA 1DPCA 2II3A 3B30A 5FANA 1XL8A 2I9DA 1CLAA 1EAEA 1SCZA 2E1UA 4JN3A 3U9BA 3U9FA 2E1TA 2RKVA 5KJWA 2CLAA 1DPBA 2VSQA 1DPDA 1PD5A 3FP0A 3L60A 2ZBAA 5T3EA 3FOTA 1XMDA 1EADA 1QCAA 5DU9A 2XHGA 4KE4A 2JGPA 4JN5A 5DUAA 5KJSA 1L5AA 1CIAA 4G2MA 1NOCB 2RKTA 2E1VA 4G0BA 4G22A 4KECA 1XL7A 1C4TA 2BGHA 4CLAA 1EAFA 4N72A 4HVMA 5KJVA 2II4A 1Q23A 2IHWA 5KJUA 3B2SA 3CLAA 1E2OA 5KJTA 3MAEA 1XMCA 2XR7A 1Q9JA 1EABA 2II5A 5FALA 1EACA
chains in the Genus database with same CATH superfamily
3B30A 5FANA 2H3UA 1EAEA 4JN3A 3U9BA 3L60A 1T1UA 1NDBA 4KE4A 2FY2A 2RKTA 2E1VA 1C4TA 2BGHA 1Q23A 2IHWA 5KJUA 2RCUA 1XMCA 1EABA 1DPCA 2II3A 1XL8A 3U9FA 2E1UA 2CLAA 1PD5A 2ZBAA 5T3EA 3FOTA 1EADA 5DU9A 2H3WA 1NOCB 4KECA 1T7OA 4CLAA 4N72A 4HVMA 2H3PA 2DEBA 3MAEA 1T7NA 1Q9JA 4EP9A 1S5OA 4EPHA 1EACA 1T7QA 2I9DA 1CLAA 2FW3A 2RKVA 2VSQA 1DPBA 1DPDA 2FY5A 1XMDA 2H4TA 2XHGA 2JGPA 1L5AA 4EYWA 4G0BA 4G22A 5KJVA 1NDFA 2II4A 2FYOA 2XR7A 2II5A 1EAAA 1SCZA 2E1TA 5KJWA 3FP0A 1QCAA 1NDIA 4JN5A 5DUAA 5KJSA 1Q6XA 1CIAA 4G2MA 1XL7A 2FY3A 1EAFA 1NM8A 3B2SA 3CLAA 1E2OA 5KJTA 2FY4A 5FALA
chains in the Genus database with same CATH topology
1EAAA 1DPCA 2II3A 3B30A 5FANA 1XL8A 2I9DA 1CLAA 1EAEA 1SCZA 2E1UA 4JN3A 3U9BA 3U9FA 2E1TA 2RKVA 5KJWA 2CLAA 1DPBA 2VSQA 1DPDA 1PD5A 3FP0A 3L60A 2ZBAA 5T3EA 3FOTA 1XMDA 1EADA 1QCAA 5DU9A 2XHGA 4KE4A 2JGPA 4JN5A 5DUAA 5KJSA 1L5AA 1CIAA 4G2MA 1NOCB 2RKTA 2E1VA 4G0BA 4G22A 4KECA 1XL7A 1C4TA 2BGHA 4CLAA 1EAFA 4N72A 4HVMA 5KJVA 2II4A 1Q23A 2IHWA 5KJUA 3B2SA 3CLAA 1E2OA 5KJTA 3MAEA 1XMCA 2XR7A 1Q9JA 1EABA 2II5A 5FALA 1EACA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1EAA A;  1DPC A;  2II3 A;  3B30 A;  5FAN A;  1XL8 A;  2I9D A;  1CLA A;  1EAE A;  1SCZ A;  2E1U A;  4JN3 A;  3U9B A;  3U9F A;  2E1T A;  2RKV A;  5KJW A;  2CLA A;  1DPB A;  2VSQ A;  1DPD A;  1PD5 A;  3FP0 A;  3L60 A;  2ZBA A;  5T3E A;  3FOT A;  1XMD A;  1EAD A;  1QCA A;  5DU9 A;  2XHG A;  4KE4 A;  2JGP A;  4JN5 A;  5DUA A;  5KJS A;  1L5A A;  1CIA A;  4G2M A;  1NOC B;  2RKT A;  2E1V A;  4G0B A;  4G22 A;  4KEC A;  1XL7 A;  1C4T A;  2BGH A;  4CLA A;  1EAF A;  4N72 A;  4HVM A;  5KJV A;  2II4 A;  1Q23 A;  2IHW A;  5KJU A;  3B2S A;  3CLA A;  1E2O A;  5KJT A;  3MAE A;  1XMC A;  2XR7 A;  1Q9J A;  1EAB A;  2II5 A;  5FAL A;  1EAC A; 
#chains in the Genus database with same CATH topology
 3B30 A;  5FAN A;  2H3U A;  1EAE A;  4JN3 A;  3U9B A;  3L60 A;  1T1U A;  1NDB A;  4KE4 A;  2FY2 A;  2RKT A;  2E1V A;  1C4T A;  2BGH A;  1Q23 A;  2IHW A;  5KJU A;  2RCU A;  1XMC A;  1EAB A;  1DPC A;  2II3 A;  1XL8 A;  3U9F A;  2E1U A;  2CLA A;  1PD5 A;  2ZBA A;  5T3E A;  3FOT A;  1EAD A;  5DU9 A;  2H3W A;  1NOC B;  4KEC A;  1T7O A;  4CLA A;  4N72 A;  4HVM A;  2H3P A;  2DEB A;  3MAE A;  1T7N A;  1Q9J A;  4EP9 A;  1S5O A;  4EPH A;  1EAC A;  1T7Q A;  2I9D A;  1CLA A;  2FW3 A;  2RKV A;  2VSQ A;  1DPB A;  1DPD A;  2FY5 A;  1XMD A;  2H4T A;  2XHG A;  2JGP A;  1L5A A;  4EYW A;  4G0B A;  4G22 A;  5KJV A;  1NDF A;  2II4 A;  2FYO A;  2XR7 A;  2II5 A;  1EAA A;  1SCZ A;  2E1T A;  5KJW A;  3FP0 A;  1QCA A;  1NDI A;  4JN5 A;  5DUA A;  5KJS A;  1Q6X A;  1CIA A;  4G2M A;  1XL7 A;  2FY3 A;  1EAF A;  1NM8 A;  3B2S A;  3CLA A;  1E2O A;  5KJT A;  2FY4 A;  5FAL A; 
#chains in the Genus database with same CATH homology
 1EAA A;  1DPC A;  2II3 A;  3B30 A;  5FAN A;  1XL8 A;  2I9D A;  1CLA A;  1EAE A;  1SCZ A;  2E1U A;  4JN3 A;  3U9B A;  3U9F A;  2E1T A;  2RKV A;  5KJW A;  2CLA A;  1DPB A;  2VSQ A;  1DPD A;  1PD5 A;  3FP0 A;  3L60 A;  2ZBA A;  5T3E A;  3FOT A;  1XMD A;  1EAD A;  1QCA A;  5DU9 A;  2XHG A;  4KE4 A;  2JGP A;  4JN5 A;  5DUA A;  5KJS A;  1L5A A;  1CIA A;  4G2M A;  1NOC B;  2RKT A;  2E1V A;  4G0B A;  4G22 A;  4KEC A;  1XL7 A;  1C4T A;  2BGH A;  4CLA A;  1EAF A;  4N72 A;  4HVM A;  5KJV A;  2II4 A;  1Q23 A;  2IHW A;  5KJU A;  3B2S A;  3CLA A;  1E2O A;  5KJT A;  3MAE A;  1XMC A;  2XR7 A;  1Q9J A;  1EAB A;  2II5 A;  5FAL A;  1EAC A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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