5KJTA

Crystal structure of arabidopsis thaliana hct in complex with p-coumaroyl-coa
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
431
structure length
431
Chain Sequence
b'MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLF'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Shikimate O-hydroxycinnamoyltransferase
publication title Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Transferase
total genus 119
structure length 431
sequence length 431
ec nomenclature ec 2.3.1.133: Shikimate O-hydroxycinnamoyltransferase.
pdb deposition date 2016-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjtA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjtA01
5FANA 5KJSA 1XMDA 3B30A 1XL8A 1DPCA 2XHGA 1EAEA 1DPBA 3U9FA 1EACA 5KJTA 3CLAA 2XR7A 2JGPA 4JN5A 4KE4A 1EAAA 3MAEA 3L60A 2I9DA 1DPDA 3FOTA 4JN3A 2CLAA 1QCAA 2II5A 4N72A 2IHWA 2RKVA 5KJUA 2E1UA 2E1TA 2II3A 1NOCB 3U9BA 5DUAA 4G0BA 2E1VA 4HVMA 5KJWA 2RKTA 1PD5A 1SCZA 4KECA 5T3EA 1C4TA 3FP0A 2II4A 1Q23A 1L5AA 5KJVA 5FALA 1XL7A 1CIAA 4CLAA 1EADA 1EABA 1E2OA 2BGHA 5DU9A 4G22A 2ZBAA 1Q9JA 2VSQA 4G2MA 3B2SA 1EAFA 1XMCA 1CLAA
chains in the Genus database with same CATH superfamily
1EAEA 5KJTA 1NDIA 2JGPA 2RCUA 4JN5A 3L60A 2H3WA 1NDBA 2CLAA 1NOCB 3U9BA 4KECA 3FP0A 2II4A 5KJVA 1T7NA 5FALA 4CLAA 1EADA 1E2OA 2ZBAA 2FY5A 1T1UA 4EP9A 1DPBA 2XR7A 4EYWA 4KE4A 4N72A 2E1VA 4HVMA 2FW3A 1NM8A 1SCZA 2H3UA 2DEBA 1Q23A 1L5AA 1CIAA 1EABA 2VSQA 3B2SA 5KJSA 1XL8A 2XHGA 3U9FA 3CLAA 2FY4A 1EAAA 3MAEA 2I9DA 3FOTA 1QCAA 2II5A 5KJUA 2E1TA 2FY2A 1S5OA 5DUAA 1NDFA 5KJWA 1PD5A 5T3EA 2BGHA 2FYOA 5FANA 1XMDA 3B30A 1DPCA 1EACA 1T7OA 1DPDA 4EPHA 4JN3A 1T7QA 2IHWA 2RKVA 2E1UA 2II3A 4G0BA 2RKTA 1C4TA 1XL7A 2H3PA 2FY3A 1Q6XA 4G22A 5DU9A 2H4TA 1Q9JA 4G2MA 1EAFA 1XMCA 1CLAA
chains in the Genus database with same CATH topology
5FANA 5KJSA 1XMDA 3B30A 1XL8A 1DPCA 2XHGA 1EAEA 1DPBA 3U9FA 1EACA 5KJTA 3CLAA 2XR7A 2JGPA 4JN5A 4KE4A 1EAAA 3MAEA 3L60A 2I9DA 1DPDA 3FOTA 4JN3A 2CLAA 1QCAA 2II5A 4N72A 2IHWA 2RKVA 5KJUA 2E1UA 2E1TA 2II3A 1NOCB 3U9BA 5DUAA 4G0BA 2E1VA 4HVMA 5KJWA 2RKTA 1PD5A 1SCZA 4KECA 5T3EA 1C4TA 3FP0A 2II4A 1Q23A 1L5AA 5KJVA 5FALA 1XL7A 1CIAA 4CLAA 1EADA 1EABA 1E2OA 2BGHA 5DU9A 4G22A 2ZBAA 1Q9JA 2VSQA 4G2MA 3B2SA 1EAFA 1XMCA 1CLAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5FAN A;  5KJS A;  1XMD A;  3B30 A;  1XL8 A;  1DPC A;  2XHG A;  1EAE A;  1DPB A;  3U9F A;  1EAC A;  5KJT A;  3CLA A;  2XR7 A;  2JGP A;  4JN5 A;  4KE4 A;  1EAA A;  3MAE A;  3L60 A;  2I9D A;  1DPD A;  3FOT A;  4JN3 A;  2CLA A;  1QCA A;  2II5 A;  4N72 A;  2IHW A;  2RKV A;  5KJU A;  2E1U A;  2E1T A;  2II3 A;  1NOC B;  3U9B A;  5DUA A;  4G0B A;  2E1V A;  4HVM A;  5KJW A;  2RKT A;  1PD5 A;  1SCZ A;  4KEC A;  5T3E A;  1C4T A;  3FP0 A;  2II4 A;  1Q23 A;  1L5A A;  5KJV A;  5FAL A;  1XL7 A;  1CIA A;  4CLA A;  1EAD A;  1EAB A;  1E2O A;  2BGH A;  5DU9 A;  4G22 A;  2ZBA A;  1Q9J A;  2VSQ A;  4G2M A;  3B2S A;  1EAF A;  1XMC A;  1CLA A; 
#chains in the Genus database with same CATH topology
 1EAE A;  5KJT A;  1NDI A;  2JGP A;  2RCU A;  4JN5 A;  3L60 A;  2H3W A;  1NDB A;  2CLA A;  1NOC B;  3U9B A;  4KEC A;  3FP0 A;  2II4 A;  5KJV A;  1T7N A;  5FAL A;  4CLA A;  1EAD A;  1E2O A;  2ZBA A;  2FY5 A;  1T1U A;  4EP9 A;  1DPB A;  2XR7 A;  4EYW A;  4KE4 A;  4N72 A;  2E1V A;  4HVM A;  2FW3 A;  1NM8 A;  1SCZ A;  2H3U A;  2DEB A;  1Q23 A;  1L5A A;  1CIA A;  1EAB A;  2VSQ A;  3B2S A;  5KJS A;  1XL8 A;  2XHG A;  3U9F A;  3CLA A;  2FY4 A;  1EAA A;  3MAE A;  2I9D A;  3FOT A;  1QCA A;  2II5 A;  5KJU A;  2E1T A;  2FY2 A;  1S5O A;  5DUA A;  1NDF A;  5KJW A;  1PD5 A;  5T3E A;  2BGH A;  2FYO A;  5FAN A;  1XMD A;  3B30 A;  1DPC A;  1EAC A;  1T7O A;  1DPD A;  4EPH A;  4JN3 A;  1T7Q A;  2IHW A;  2RKV A;  2E1U A;  2II3 A;  4G0B A;  2RKT A;  1C4T A;  1XL7 A;  2H3P A;  2FY3 A;  1Q6X A;  4G22 A;  5DU9 A;  2H4T A;  1Q9J A;  4G2M A;  1EAF A;  1XMC A;  1CLA A; 
#chains in the Genus database with same CATH homology
 5FAN A;  5KJS A;  1XMD A;  3B30 A;  1XL8 A;  1DPC A;  2XHG A;  1EAE A;  1DPB A;  3U9F A;  1EAC A;  5KJT A;  3CLA A;  2XR7 A;  2JGP A;  4JN5 A;  4KE4 A;  1EAA A;  3MAE A;  3L60 A;  2I9D A;  1DPD A;  3FOT A;  4JN3 A;  2CLA A;  1QCA A;  2II5 A;  4N72 A;  2IHW A;  2RKV A;  5KJU A;  2E1U A;  2E1T A;  2II3 A;  1NOC B;  3U9B A;  5DUA A;  4G0B A;  2E1V A;  4HVM A;  5KJW A;  2RKT A;  1PD5 A;  1SCZ A;  4KEC A;  5T3E A;  1C4T A;  3FP0 A;  2II4 A;  1Q23 A;  1L5A A;  5KJV A;  5FAL A;  1XL7 A;  1CIA A;  4CLA A;  1EAD A;  1EAB A;  1E2O A;  2BGH A;  5DU9 A;  4G22 A;  2ZBA A;  1Q9J A;  2VSQ A;  4G2M A;  3B2S A;  1EAF A;  1XMC A;  1CLA A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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