5KJTA

Crystal structure of arabidopsis thaliana hct in complex with p-coumaroyl-coa
Total Genus 119
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
119
sequence length
431
structure length
431
Chain Sequence
MKINIRDSTMVRPATETPITNLWNSNVDLVIPRFHTPSVYFYRPTGASNFFDPQVMKEALSKALVPFYPMAGRLKRDDDGRIEIDCNGAGVLFVVADTPSVIDDFGDFAPTLNLRQLIPEVDHSAGIHSFPLLVLQVTFFKCGGASLGVGMQHHAADGFSGLHFINTWSDMARGLDLTIPPFIDRTLLRARDPPQPAFHHVEYQPAPSMKIPLDPSKSGPENTTVSIFKLTRDQLVALKAKSKEDGNTVSYSSYEMLAGHVWRSVGKARGLPNDQETKLYIATDGRSRLRPQLPPGYFGNVIFTATPLAVAGDLLSKPTWYAAGQIHDFLVRMDDNYLRSALDYLEMQPDLSALVRGAHTYKCPNLGITSWVRLPIYDADFGWGRPIFMGPGGIPYEGLSFVLPSPTNDGSLSVAIALQSEHMKLFEKFLF
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Shikimate O-hydroxycinnamoyltransferase
publication title Dynamic Conformational States Dictate Selectivity toward the Native Substrate in a Substrate-Permissive Acyltransferase.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Transferase
total genus 119
structure length 431
sequence length 431
ec nomenclature ec 2.3.1.133: Shikimate O-hydroxycinnamoyltransferase.
pdb deposition date 2016-06-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjtA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 5kjtA01
4KE4A 1EADA 1E2OA 1L5AA 5KJUA 5FALA 1PD5A 2E1UA 3U9FA 2II4A 1CLAA 4N72A 1DPCA 2RKVA 3B2SA 1Q9JA 5DUAA 3L60A 4HVMA 4JN3A 5FANA 2JGPA 2XHGA 1XMDA 1XL8A 3FP0A 4KECA 2ZBAA 4G2MA 1XL7A 2VSQA 3MAEA 1C4TA 1Q23A 4G22A 5DU9A 3CLAA 4JN5A 1CIAA 1EAAA 1DPBA 1EABA 2II3A 3B30A 1QCAA 3FOTA 4G0BA 5KJVA 2II5A 2E1VA 1DPDA 3U9BA 1SCZA 2XR7A 2E1TA 2I9DA 5KJWA 1XMCA 1EAFA 2CLAA 4CLAA 2RKTA 1EACA 5KJTA 2IHWA 1NOCB 2BGHA 5KJSA 1EAEA 5T3EA
chains in the Genus database with same CATH superfamily
1EADA 5KJUA 5FALA 1PD5A 1S5OA 1CLAA 2FY2A 2JGPA 4KECA 1XL8A 2VSQA 1QCAA 3FOTA 4G0BA 5KJVA 2II5A 2E1VA 2XR7A 2I9DA 2CLAA 5KJTA 1T7OA 2IHWA 5KJSA 5T3EA 4KE4A 1L5AA 2E1UA 2FY5A 1T7NA 5DUAA 4HVMA 1NDBA 5FANA 1XMDA 2ZBAA 1XL7A 4EPHA 1Q23A 4G22A 3CLAA 4JN5A 1EAAA 5KJWA 2E1TA 1EAFA 1NOCB 2FY3A 2H3WA 3U9FA 4N72A 1DPCA 2RKVA 2DEBA 1NM8A 2FY4A 1CIAA 1DPBA 2II3A 2H4TA 1DPDA 3U9BA 1XMCA 4CLAA 1EACA 2BGHA 4EYWA 2H3PA 1E2OA 2II4A 1Q6XA 3B2SA 1Q9JA 1NDFA 2FW3A 3L60A 4JN3A 2FYOA 2XHGA 3FP0A 2H3UA 4G2MA 3MAEA 1C4TA 5DU9A 1T1UA 1EABA 1T7QA 3B30A 1SCZA 4EP9A 1NDIA 2RKTA 1EAEA 2RCUA
chains in the Genus database with same CATH topology
4KE4A 1EADA 1E2OA 1L5AA 5KJUA 5FALA 1PD5A 2E1UA 3U9FA 2II4A 1CLAA 4N72A 1DPCA 2RKVA 3B2SA 1Q9JA 5DUAA 3L60A 4HVMA 4JN3A 5FANA 2JGPA 2XHGA 1XMDA 1XL8A 3FP0A 4KECA 2ZBAA 4G2MA 1XL7A 2VSQA 3MAEA 1C4TA 1Q23A 4G22A 5DU9A 3CLAA 4JN5A 1CIAA 1EAAA 1DPBA 1EABA 2II3A 3B30A 1QCAA 3FOTA 4G0BA 5KJVA 2II5A 2E1VA 1DPDA 3U9BA 1SCZA 2XR7A 2E1TA 2I9DA 5KJWA 1XMCA 1EAFA 2CLAA 4CLAA 2RKTA 1EACA 5KJTA 2IHWA 1NOCB 2BGHA 5KJSA 1EAEA 5T3EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KE4 A;  1EAD A;  1E2O A;  1L5A A;  5KJU A;  5FAL A;  1PD5 A;  2E1U A;  3U9F A;  2II4 A;  1CLA A;  4N72 A;  1DPC A;  2RKV A;  3B2S A;  1Q9J A;  5DUA A;  3L60 A;  4HVM A;  4JN3 A;  5FAN A;  2JGP A;  2XHG A;  1XMD A;  1XL8 A;  3FP0 A;  4KEC A;  2ZBA A;  4G2M A;  1XL7 A;  2VSQ A;  3MAE A;  1C4T A;  1Q23 A;  4G22 A;  5DU9 A;  3CLA A;  4JN5 A;  1CIA A;  1EAA A;  1DPB A;  1EAB A;  2II3 A;  3B30 A;  1QCA A;  3FOT A;  4G0B A;  5KJV A;  2II5 A;  2E1V A;  1DPD A;  3U9B A;  1SCZ A;  2XR7 A;  2E1T A;  2I9D A;  5KJW A;  1XMC A;  1EAF A;  2CLA A;  4CLA A;  2RKT A;  1EAC A;  5KJT A;  2IHW A;  1NOC B;  2BGH A;  5KJS A;  1EAE A;  5T3E A; 
#chains in the Genus database with same CATH topology
 1EAD A;  5KJU A;  5FAL A;  1PD5 A;  1S5O A;  1CLA A;  2FY2 A;  2JGP A;  4KEC A;  1XL8 A;  2VSQ A;  1QCA A;  3FOT A;  4G0B A;  5KJV A;  2II5 A;  2E1V A;  2XR7 A;  2I9D A;  2CLA A;  5KJT A;  1T7O A;  2IHW A;  5KJS A;  5T3E A;  4KE4 A;  1L5A A;  2E1U A;  2FY5 A;  1T7N A;  5DUA A;  4HVM A;  1NDB A;  5FAN A;  1XMD A;  2ZBA A;  1XL7 A;  4EPH A;  1Q23 A;  4G22 A;  3CLA A;  4JN5 A;  1EAA A;  5KJW A;  2E1T A;  1EAF A;  1NOC B;  2FY3 A;  2H3W A;  3U9F A;  4N72 A;  1DPC A;  2RKV A;  2DEB A;  1NM8 A;  2FY4 A;  1CIA A;  1DPB A;  2II3 A;  2H4T A;  1DPD A;  3U9B A;  1XMC A;  4CLA A;  1EAC A;  2BGH A;  4EYW A;  2H3P A;  1E2O A;  2II4 A;  1Q6X A;  3B2S A;  1Q9J A;  1NDF A;  2FW3 A;  3L60 A;  4JN3 A;  2FYO A;  2XHG A;  3FP0 A;  2H3U A;  4G2M A;  3MAE A;  1C4T A;  5DU9 A;  1T1U A;  1EAB A;  1T7Q A;  3B30 A;  1SCZ A;  4EP9 A;  1NDI A;  2RKT A;  1EAE A;  2RCU A; 
#chains in the Genus database with same CATH homology
 4KE4 A;  1EAD A;  1E2O A;  1L5A A;  5KJU A;  5FAL A;  1PD5 A;  2E1U A;  3U9F A;  2II4 A;  1CLA A;  4N72 A;  1DPC A;  2RKV A;  3B2S A;  1Q9J A;  5DUA A;  3L60 A;  4HVM A;  4JN3 A;  5FAN A;  2JGP A;  2XHG A;  1XMD A;  1XL8 A;  3FP0 A;  4KEC A;  2ZBA A;  4G2M A;  1XL7 A;  2VSQ A;  3MAE A;  1C4T A;  1Q23 A;  4G22 A;  5DU9 A;  3CLA A;  4JN5 A;  1CIA A;  1EAA A;  1DPB A;  1EAB A;  2II3 A;  3B30 A;  1QCA A;  3FOT A;  4G0B A;  5KJV A;  2II5 A;  2E1V A;  1DPD A;  3U9B A;  1SCZ A;  2XR7 A;  2E1T A;  2I9D A;  5KJW A;  1XMC A;  1EAF A;  2CLA A;  4CLA A;  2RKT A;  1EAC A;  5KJT A;  2IHW A;  1NOC B;  2BGH A;  5KJS A;  1EAE A;  5T3E A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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#similar chains, but unknotted
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