1T7OA

Crystal structure of the m564g mutant of murine carnitine acetyltransferase in complex with carnitine
Total Genus 214
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
214
sequence length
599
structure length
599
Chain Sequence
SHMAHQDALPRLPVPPLQQSLDYYLKALQPIVSEEEWAHTKQLVDEFQTSGGVGERLQKGLERRAKKMENWLSEWWLKTAYLQFRQPVVIYSSPGVILPKQDFVDLQGQLRFAAKLIEGVLDFKSMIDNETLPVEFLGGQPLCMNQYYQILSSCRVPGPKQDSVVNFLKSKRPPTHITVVHNYQFFELDVYHSDGTPLTSDQIFVQLEKIWNSSLQSNKEPVGILTSNHRNTWAKAYNNLIKDKVNRESVNSIQKSIFTVCLDKQVPRVSDDVYRNHVAGQMLHGGGSKFNSGNRWFDKTLQFIVAEDGSCGMVYEHAAAEGPPIVALVDHVMEYTKKPELVRSPMVPLPMPKKLRFNITPEIKNDIEKAKQNLSIMIQDLDIMMLTFHHFGKDFPKSEKLSPDAFIQVALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASIDSLAFVKGMGDSTVPEQQKVELLRKAVQAHRAYTDRAIRGEAFDRHLLGLKLQAIEDLVSMPDIFMDTSYAIAMHFNLSTSQVPAKTDCVGFFGPVVPDGYGICYNPMEAHINFSVSAYNSCAETNAARMAHYLEKALLDMRTLLQNHPRAK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Carnitine acetyltransferase
publication title Structural and biochemical studies of the substrate selectivity of carnitine acetyltransferase
pubmed doi rcsb
source organism Mus musculus
molecule tags Transferase
total genus 214
structure length 599
sequence length 599
ec nomenclature ec 2.3.1.7: Carnitine O-acetyltransferase.
pdb deposition date 2004-05-10

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00755 Carn_acyltransf Choline/Carnitine o-acyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.40 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7oA01
3.30.559.70 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol Acetyltransferase 1t7oA02
2H3UA 2FY3A 1T7QA 2H4TA 2FY5A 2H3PA 1Q6XA 1S5OA 1T7NA 2DEBA 2RCUA 1NDIA 2FYOA 2FY4A 1NDBA 4EYWA 2FW3A 4EP9A 1NDFA 4EPHA 2FY2A 1T1UA 1T7OA 1NM8A 2H3WA
chains in the Genus database with same CATH superfamily
1Q23A 3FP0A 2H3PA 3L60A 2RCUA 1NDBA 5KJVA 2BGHA 1NOCB 2FW3A 4EP9A 1XL8A 1L5AA 1T1UA 1E2OA 1T7OA 1NM8A 2H3WA 1CLAA 5KJTA 1EAAA 1C4TA 1Q9JA 1EAFA 1EACA 1T7QA 4G2MA 5FANA 5T3EA 3U9FA 1S5OA 3FOTA 1NDIA 4JN5A 2FY4A 1DPDA 2ZBAA 2XR7A 4CLAA 1EAEA 1NDFA 4G22A 2RKVA 2I9DA 4KECA 2E1UA 2H4TA 1XMDA 2IHWA 2CLAA 1EABA 2DEBA 2FYOA 5FALA 2E1VA 1PD5A 2XHGA 1XL7A 2II3A 2FY2A 3CLAA 5KJWA 4HVMA 4G0BA 1SCZA 2H3UA 5KJSA 2FY3A 5DU9A 1DPBA 1DPCA 5KJUA 2FY5A 3B30A 1Q6XA 3U9BA 1CIAA 1T7NA 4N72A 4EYWA 2E1TA 4JN3A 2II4A 4EPHA 3MAEA 2RKTA 4KE4A 1XMCA 1QCAA 2VSQA 2JGPA 2II5A 1EADA 5DUAA 3B2SA
chains in the Genus database with same CATH topology
2H3UA 1Q9JA 2FY3A 3FP0A 5DU9A 1T7QA 2H4TA 5T3EA 2FY5A 2H3PA 1Q6XA 1S5OA 3FOTA 1T7NA 2DEBA 2RCUA 1NDIA 2FYOA 4JN5A 2FY4A 1NDBA 4EYWA 2FW3A 4EP9A 4JN3A 1L5AA 2XHGA 1NDFA 4EPHA 2FY2A 1T1UA 2VSQA 2JGPA 1T7OA 5DUAA 1NM8A 2H3WA 4HVMA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2H3U A;  2FY3 A;  1T7Q A;  2H4T A;  2FY5 A;  2H3P A;  1Q6X A;  1S5O A;  1T7N A;  2DEB A;  2RCU A;  1NDI A;  2FYO A;  2FY4 A;  1NDB A;  4EYW A;  2FW3 A;  4EP9 A;  1NDF A;  4EPH A;  2FY2 A;  1T1U A;  1T7O A;  1NM8 A;  2H3W A; 
#chains in the Genus database with same CATH topology
 1Q23 A;  3FP0 A;  2H3P A;  3L60 A;  2RCU A;  1NDB A;  5KJV A;  2BGH A;  1NOC B;  2FW3 A;  4EP9 A;  1XL8 A;  1L5A A;  1T1U A;  1E2O A;  1T7O A;  1NM8 A;  2H3W A;  1CLA A;  5KJT A;  1EAA A;  1C4T A;  1Q9J A;  1EAF A;  1EAC A;  1T7Q A;  4G2M A;  5FAN A;  5T3E A;  3U9F A;  1S5O A;  3FOT A;  1NDI A;  4JN5 A;  2FY4 A;  1DPD A;  2ZBA A;  2XR7 A;  4CLA A;  1EAE A;  1NDF A;  4G22 A;  2RKV A;  2I9D A;  4KEC A;  2E1U A;  2H4T A;  1XMD A;  2IHW A;  2CLA A;  1EAB A;  2DEB A;  2FYO A;  5FAL A;  2E1V A;  1PD5 A;  2XHG A;  1XL7 A;  2II3 A;  2FY2 A;  3CLA A;  5KJW A;  4HVM A;  4G0B A;  1SCZ A;  2H3U A;  5KJS A;  2FY3 A;  5DU9 A;  1DPB A;  1DPC A;  5KJU A;  2FY5 A;  3B30 A;  1Q6X A;  3U9B A;  1CIA A;  1T7N A;  4N72 A;  4EYW A;  2E1T A;  4JN3 A;  2II4 A;  4EPH A;  3MAE A;  2RKT A;  4KE4 A;  1XMC A;  1QCA A;  2VSQ A;  2JGP A;  2II5 A;  1EAD A;  5DUA A;  3B2S A; 
#chains in the Genus database with same CATH homology
 2H3U A;  1Q9J A;  2FY3 A;  3FP0 A;  5DU9 A;  1T7Q A;  2H4T A;  5T3E A;  2FY5 A;  2H3P A;  1Q6X A;  1S5O A;  3FOT A;  1T7N A;  2DEB A;  2RCU A;  1NDI A;  2FYO A;  4JN5 A;  2FY4 A;  1NDB A;  4EYW A;  2FW3 A;  4EP9 A;  4JN3 A;  1L5A A;  2XHG A;  1NDF A;  4EPH A;  2FY2 A;  1T1U A;  2VSQ A;  2JGP A;  1T7O A;  5DUA A;  1NM8 A;  2H3W A;  4HVM A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...