1Q23A

Crystal structure of chloramphenicol acetyltransferase i complexed with fusidic acid at 2.18 a resolution
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
214
structure length
214
Chain Sequence
ITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of Chloramphenicol acetyltransferase I in the apoenzyme form and complexed with fusidic acid at 2.18 A resolution
rcsb
molecule tags Transferase
source organism Escherichia coli
molecule keywords Chloramphenicol acetyltransferase
total genus 63
structure length 214
sequence length 214
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L
ec nomenclature ec 2.3.1.28: Chloramphenicol O-acetyltransferase.
pdb deposition date 2003-07-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00302 CAT Chloramphenicol acetyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 1q23A00
3MAEA 1QCAA 1SCZA 1DPDA 1PD5A 1Q9JA 1XL7A 1EABA 1XMDA 3B30A 3L60A 2RKTA 2VSQA 2II3A 3B2SA 1NOCB 2IHWA 4CLAA 3FOTA 4JN3A 5KJVA 5FALA 1C4TA 2JGPA 1XMCA 1EAFA 1EADA 2ZBAA 3U9BA 5DU9A 1XL8A 1EAEA 2E1VA 2RKVA 4KECA 1EAAA 2E1UA 3FP0A 1DPBA 5T3EA 3U9FA 2XHGA 5FANA 1CIAA 1Q23A 1E2OA 1CLAA 2BGHA 4HVMA 4G22A 1DPCA 1EACA 2II4A 5KJWA 2XR7A 4N72A 2II5A 2E1TA 2I9DA 4G2MA 5DUAA 3CLAA 5KJUA 1L5AA 5KJTA 2CLAA 4G0BA 5KJSA 4KE4A 4JN5A
chains in the Genus database with same CATH superfamily
3MAEA 1QCAA 1PD5A 1XL7A 3B30A 4EPHA 1EAFA 3U9BA 1XL8A 2FY2A 1T1UA 4KECA 1EAAA 3FP0A 1DPBA 1Q6XA 1E2OA 1CLAA 4G22A 2H3PA 4G2MA 5DUAA 5KJVA 4EP9A 4EYWA 4KE4A 2FW3A 1SCZA 1Q9JA 2VSQA 2II3A 3FOTA 4JN3A 5FALA 2FY4A 1EADA 2RCUA 2ZBAA 2FY5A 2RKVA 3U9FA 2XHGA 5FANA 2FYOA 2BGHA 1EACA 2XR7A 2H3WA 3CLAA 2DEBA 2H3UA 3L60A 1XMDA 1EABA 1NDBA 1T7NA 3B2SA 1T7OA 1NOCB 2IHWA 4CLAA 1C4TA 2H4TA 2FY3A 1Q23A 5KJWA 1DPCA 2II5A 2I9DA 1L5AA 4G0BA 1DPDA 1NM8A 2RKTA 2JGPA 1XMCA 1S5OA 5DU9A 1EAEA 2E1VA 1NDIA 2E1UA 5T3EA 1CIAA 4HVMA 2II4A 4N72A 2E1TA 5KJUA 1T7QA 5KJSA 5KJTA 2CLAA 1NDFA 4JN5A
chains in the Genus database with same CATH topology
3MAEA 1QCAA 1SCZA 1DPDA 1PD5A 1Q9JA 1XL7A 1EABA 1XMDA 3B30A 3L60A 2RKTA 2VSQA 2II3A 3B2SA 1NOCB 2IHWA 4CLAA 3FOTA 4JN3A 5KJVA 5FALA 1C4TA 2JGPA 1XMCA 1EAFA 1EADA 2ZBAA 3U9BA 5DU9A 1XL8A 1EAEA 2E1VA 2RKVA 4KECA 1EAAA 2E1UA 3FP0A 1DPBA 5T3EA 3U9FA 2XHGA 5FANA 1CIAA 1Q23A 1E2OA 1CLAA 2BGHA 4HVMA 4G22A 1DPCA 1EACA 2II4A 5KJWA 2XR7A 4N72A 2II5A 2E1TA 2I9DA 4G2MA 5DUAA 3CLAA 5KJUA 1L5AA 5KJTA 2CLAA 4G0BA 5KJSA 4KE4A 4JN5A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3MAE A;  1QCA A;  1SCZ A;  1DPD A;  1PD5 A;  1Q9J A;  1XL7 A;  1EAB A;  1XMD A;  3B30 A;  3L60 A;  2RKT A;  2VSQ A;  2II3 A;  3B2S A;  1NOC B;  2IHW A;  4CLA A;  3FOT A;  4JN3 A;  5KJV A;  5FAL A;  1C4T A;  2JGP A;  1XMC A;  1EAF A;  1EAD A;  2ZBA A;  3U9B A;  5DU9 A;  1XL8 A;  1EAE A;  2E1V A;  2RKV A;  4KEC A;  1EAA A;  2E1U A;  3FP0 A;  1DPB A;  5T3E A;  3U9F A;  2XHG A;  5FAN A;  1CIA A;  1Q23 A;  1E2O A;  1CLA A;  2BGH A;  4HVM A;  4G22 A;  1DPC A;  1EAC A;  2II4 A;  5KJW A;  2XR7 A;  4N72 A;  2II5 A;  2E1T A;  2I9D A;  4G2M A;  5DUA A;  3CLA A;  5KJU A;  1L5A A;  5KJT A;  2CLA A;  4G0B A;  5KJS A;  4KE4 A;  4JN5 A; 
#chains in the Genus database with same CATH topology
 3MAE A;  1QCA A;  1PD5 A;  1XL7 A;  3B30 A;  4EPH A;  1EAF A;  3U9B A;  1XL8 A;  2FY2 A;  1T1U A;  4KEC A;  1EAA A;  3FP0 A;  1DPB A;  1Q6X A;  1E2O A;  1CLA A;  4G22 A;  2H3P A;  4G2M A;  5DUA A;  5KJV A;  4EP9 A;  4EYW A;  4KE4 A;  2FW3 A;  1SCZ A;  1Q9J A;  2VSQ A;  2II3 A;  3FOT A;  4JN3 A;  5FAL A;  2FY4 A;  1EAD A;  2RCU A;  2ZBA A;  2FY5 A;  2RKV A;  3U9F A;  2XHG A;  5FAN A;  2FYO A;  2BGH A;  1EAC A;  2XR7 A;  2H3W A;  3CLA A;  2DEB A;  2H3U A;  3L60 A;  1XMD A;  1EAB A;  1NDB A;  1T7N A;  3B2S A;  1T7O A;  1NOC B;  2IHW A;  4CLA A;  1C4T A;  2H4T A;  2FY3 A;  1Q23 A;  5KJW A;  1DPC A;  2II5 A;  2I9D A;  1L5A A;  4G0B A;  1DPD A;  1NM8 A;  2RKT A;  2JGP A;  1XMC A;  1S5O A;  5DU9 A;  1EAE A;  2E1V A;  1NDI A;  2E1U A;  5T3E A;  1CIA A;  4HVM A;  2II4 A;  4N72 A;  2E1T A;  5KJU A;  1T7Q A;  5KJS A;  5KJT A;  2CLA A;  1NDF A;  4JN5 A; 
#chains in the Genus database with same CATH homology
 3MAE A;  1QCA A;  1SCZ A;  1DPD A;  1PD5 A;  1Q9J A;  1XL7 A;  1EAB A;  1XMD A;  3B30 A;  3L60 A;  2RKT A;  2VSQ A;  2II3 A;  3B2S A;  1NOC B;  2IHW A;  4CLA A;  3FOT A;  4JN3 A;  5KJV A;  5FAL A;  1C4T A;  2JGP A;  1XMC A;  1EAF A;  1EAD A;  2ZBA A;  3U9B A;  5DU9 A;  1XL8 A;  1EAE A;  2E1V A;  2RKV A;  4KEC A;  1EAA A;  2E1U A;  3FP0 A;  1DPB A;  5T3E A;  3U9F A;  2XHG A;  5FAN A;  1CIA A;  1Q23 A;  1E2O A;  1CLA A;  2BGH A;  4HVM A;  4G22 A;  1DPC A;  1EAC A;  2II4 A;  5KJW A;  2XR7 A;  4N72 A;  2II5 A;  2E1T A;  2I9D A;  4G2M A;  5DUA A;  3CLA A;  5KJU A;  1L5A A;  5KJT A;  2CLA A;  4G0B A;  5KJS A;  4KE4 A;  4JN5 A; 
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similar chains in the Genus database (?% sequence similarity)
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