1Q23A

Crystal structure of chloramphenicol acetyltransferase i complexed with fusidic acid at 2.18 a resolution
Total Genus 63
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
63
sequence length
214
structure length
214
Chain Sequence
ITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQGG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Crystal structure of Chloramphenicol acetyltransferase I in the apoenzyme form and complexed with fusidic acid at 2.18 A resolution
rcsb
molecule tags Transferase
source organism Escherichia coli
molecule keywords Chloramphenicol acetyltransferase
total genus 63
structure length 214
sequence length 214
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L
ec nomenclature ec 2.3.1.28: Chloramphenicol O-acetyltransferase.
pdb deposition date 2003-07-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00302 CAT Chloramphenicol acetyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 1q23A00
1SCZA 1QCAA 5T3EA 2BGHA 1C4TA 1E2OA 3FP0A 1DPCA 1Q9JA 2E1TA 1CLAA 3CLAA 4KECA 1L5AA 5FANA 1XMCA 3L60A 3U9BA 4HVMA 5DU9A 1EAAA 2RKTA 2E1VA 4JN5A 1XMDA 1EABA 2II5A 4G2MA 5DUAA 4CLAA 5KJUA 5KJSA 4N72A 1CIAA 2VSQA 1XL7A 2RKVA 1NOCB 2I9DA 1EAFA 4G22A 4KE4A 3U9FA 5KJVA 5KJTA 2XR7A 1EADA 2IHWA 3B30A 3B2SA 2II3A 3MAEA 1Q23A 1EAEA 2ZBAA 4G0BA 5FALA 1XL8A 4JN3A 2E1UA 2II4A 5KJWA 1EACA 1DPDA 1PD5A 2JGPA 2CLAA 3FOTA 2XHGA 1DPBA
chains in the Genus database with same CATH superfamily
1NM8A 4EPHA 1DPCA 2FY3A 4KECA 1XMCA 3U9BA 4JN5A 2RKTA 2E1VA 1XL7A 1NOCB 5KJVA 1EAFA 2FY2A 2ZBAA 2E1UA 2FY5A 2H3PA 2XHGA 1CIAA 1SCZA 2FY4A 2E1TA 4HVMA 1EABA 1NDBA 2VSQA 5KJTA 2I9DA 1XL8A 5KJWA 1EACA 1DPDA 1PD5A 1NDIA 2FYOA 1DPBA 2H4TA 2RCUA 1Q6XA 2H3WA 3FP0A 1T1UA 3CLAA 1EAAA 1XMDA 4CLAA 2DEBA 4N72A 3U9FA 1EADA 3B30A 3B2SA 2II3A 1Q23A 1EAEA 4EP9A 2II4A 3FOTA 1QCAA 5T3EA 4EYWA 1T7QA 2BGHA 1NDFA 1C4TA 1E2OA 2H3UA 1Q9JA 1S5OA 1CLAA 1L5AA 3L60A 5DU9A 4G2MA 2II5A 5KJSA 5DUAA 5KJUA 2FW3A 2RKVA 4KE4A 4G22A 2XR7A 2IHWA 3MAEA 4G0BA 5FALA 4JN3A 2JGPA 2CLAA 1T7OA 5FANA 1T7NA
chains in the Genus database with same CATH topology
1SCZA 1QCAA 5T3EA 2BGHA 1C4TA 1E2OA 3FP0A 1DPCA 1Q9JA 2E1TA 1CLAA 3CLAA 4KECA 1L5AA 5FANA 1XMCA 3L60A 3U9BA 4HVMA 5DU9A 1EAAA 2RKTA 2E1VA 4JN5A 1XMDA 1EABA 2II5A 4G2MA 5DUAA 4CLAA 5KJUA 5KJSA 4N72A 1CIAA 2VSQA 1XL7A 2RKVA 1NOCB 2I9DA 1EAFA 4G22A 4KE4A 3U9FA 5KJVA 5KJTA 2XR7A 1EADA 2IHWA 3B30A 3B2SA 2II3A 3MAEA 1Q23A 1EAEA 2ZBAA 4G0BA 5FALA 1XL8A 4JN3A 2E1UA 2II4A 5KJWA 1EACA 1DPDA 1PD5A 2JGPA 2CLAA 3FOTA 2XHGA 1DPBA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1SCZ A;  1QCA A;  5T3E A;  2BGH A;  1C4T A;  1E2O A;  3FP0 A;  1DPC A;  1Q9J A;  2E1T A;  1CLA A;  3CLA A;  4KEC A;  1L5A A;  5FAN A;  1XMC A;  3L60 A;  3U9B A;  4HVM A;  5DU9 A;  1EAA A;  2RKT A;  2E1V A;  4JN5 A;  1XMD A;  1EAB A;  2II5 A;  4G2M A;  5DUA A;  4CLA A;  5KJU A;  5KJS A;  4N72 A;  1CIA A;  2VSQ A;  1XL7 A;  2RKV A;  1NOC B;  2I9D A;  1EAF A;  4G22 A;  4KE4 A;  3U9F A;  5KJV A;  5KJT A;  2XR7 A;  1EAD A;  2IHW A;  3B30 A;  3B2S A;  2II3 A;  3MAE A;  1Q23 A;  1EAE A;  2ZBA A;  4G0B A;  5FAL A;  1XL8 A;  4JN3 A;  2E1U A;  2II4 A;  5KJW A;  1EAC A;  1DPD A;  1PD5 A;  2JGP A;  2CLA A;  3FOT A;  2XHG A;  1DPB A; 
#chains in the Genus database with same CATH topology
 1NM8 A;  4EPH A;  1DPC A;  2FY3 A;  4KEC A;  1XMC A;  3U9B A;  4JN5 A;  2RKT A;  2E1V A;  1XL7 A;  1NOC B;  5KJV A;  1EAF A;  2FY2 A;  2ZBA A;  2E1U A;  2FY5 A;  2H3P A;  2XHG A;  1CIA A;  1SCZ A;  2FY4 A;  2E1T A;  4HVM A;  1EAB A;  1NDB A;  2VSQ A;  5KJT A;  2I9D A;  1XL8 A;  5KJW A;  1EAC A;  1DPD A;  1PD5 A;  1NDI A;  2FYO A;  1DPB A;  2H4T A;  2RCU A;  1Q6X A;  2H3W A;  3FP0 A;  1T1U A;  3CLA A;  1EAA A;  1XMD A;  4CLA A;  2DEB A;  4N72 A;  3U9F A;  1EAD A;  3B30 A;  3B2S A;  2II3 A;  1Q23 A;  1EAE A;  4EP9 A;  2II4 A;  3FOT A;  1QCA A;  5T3E A;  4EYW A;  1T7Q A;  2BGH A;  1NDF A;  1C4T A;  1E2O A;  2H3U A;  1Q9J A;  1S5O A;  1CLA A;  1L5A A;  3L60 A;  5DU9 A;  4G2M A;  2II5 A;  5KJS A;  5DUA A;  5KJU A;  2FW3 A;  2RKV A;  4KE4 A;  4G22 A;  2XR7 A;  2IHW A;  3MAE A;  4G0B A;  5FAL A;  4JN3 A;  2JGP A;  2CLA A;  1T7O A;  5FAN A;  1T7N A; 
#chains in the Genus database with same CATH homology
 1SCZ A;  1QCA A;  5T3E A;  2BGH A;  1C4T A;  1E2O A;  3FP0 A;  1DPC A;  1Q9J A;  2E1T A;  1CLA A;  3CLA A;  4KEC A;  1L5A A;  5FAN A;  1XMC A;  3L60 A;  3U9B A;  4HVM A;  5DU9 A;  1EAA A;  2RKT A;  2E1V A;  4JN5 A;  1XMD A;  1EAB A;  2II5 A;  4G2M A;  5DUA A;  4CLA A;  5KJU A;  5KJS A;  4N72 A;  1CIA A;  2VSQ A;  1XL7 A;  2RKV A;  1NOC B;  2I9D A;  1EAF A;  4G22 A;  4KE4 A;  3U9F A;  5KJV A;  5KJT A;  2XR7 A;  1EAD A;  2IHW A;  3B30 A;  3B2S A;  2II3 A;  3MAE A;  1Q23 A;  1EAE A;  2ZBA A;  4G0B A;  5FAL A;  1XL8 A;  4JN3 A;  2E1U A;  2II4 A;  5KJW A;  1EAC A;  1DPD A;  1PD5 A;  2JGP A;  2CLA A;  3FOT A;  2XHG A;  1DPB A; 
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similar chains in the Genus database (?% sequence similarity)
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