2E1VA

Crystal structure of dendranthema morifolium dmat, seleno-methionine derivative
Total Genus 136
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
136
sequence length
445
structure length
440
Chain Sequence
ILTVLEQSQVSPPPDTLGDKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGTRPLYDRIIKYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSRNDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDNDLVSEGMPTTMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVHIFDDGL
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title Structural and Mutational Studies of Anthocyanin Malonyltransferases Establish the Features of BAHD Enzyme Catalysis
pubmed doi rcsb
molecule tags Transferase
source organism Chrysanthemum x morifolium
molecule keywords acyl transferase
total genus 136
structure length 440
sequence length 445
chains with identical sequence B
ec nomenclature ec 2.-.-.-:
pdb deposition date 2006-10-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF02458 Transferase Transferase family
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 2e1vA02
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 2e1vA01
3FOTA 2XR7A 4G0BA 1QCAA 2E1UA 2E1VA 3B2SA 1DPBA 1EAFA 1SCZA 2XHGA 3B30A 1EACA 3U9BA 4JN3A 1EAEA 4HVMA 1CLAA 1CIAA 4KECA 4N72A 1XMCA 1XL8A 1DPDA 3CLAA 3U9FA 1XMDA 1E2OA 3FP0A 1Q9JA 5DUAA 2II5A 3MAEA 1NOCB 2RKVA 2I9DA 5KJVA 4G22A 2ZBAA 4G2MA 3L60A 5KJTA 1EABA 2CLAA 1L5AA 2II4A 5KJWA 1EADA 5KJUA 2VSQA 2BGHA 1PD5A 4KE4A 5DU9A 2RKTA 4JN5A 5FALA 2E1TA 1Q23A 1DPCA 5KJSA 1C4TA 1XL7A 2JGPA 5FANA 2IHWA 4CLAA 1EAAA 2II3A 5T3EA
chains in the Genus database with same CATH superfamily
3FOTA 2DEBA 3B30A 1EACA 2FY3A 1T7QA 3U9FA 1T7NA 1E2OA 3MAEA 2RKVA 2ZBAA 1EABA 1EADA 4KE4A 2FY2A 5FALA 3B2SA 2IHWA 1NM8A 2XR7A 1QCAA 3U9BA 1EAEA 4KECA 1XMCA 2FYOA 5KJVA 5KJTA 1L5AA 2VSQA 1PD5A 2RKTA 2E1TA 1Q23A 5KJSA 2JGPA 1XL7A 4CLAA 1EAFA 1SCZA 2H3UA 2XHGA 4HVMA 1CLAA 1CIAA 1XL8A 3CLAA 4EP9A 2FY4A 1Q9JA 1NOCB 2I9DA 4EPHA 4G22A 4G2MA 3L60A 5KJWA 1NDFA 1DPCA 1C4TA 2RCUA 2FY5A 2II3A 5T3EA 4G0BA 2E1UA 2E1VA 1DPBA 2H3WA 4JN3A 4EYWA 4N72A 2FW3A 1DPDA 1NDBA 2H4TA 1XMDA 3FP0A 5DUAA 2II5A 1T7OA 2H3PA 1Q6XA 2CLAA 2II4A 5KJUA 2BGHA 5DU9A 1NDIA 4JN5A 1S5OA 1T1UA 5FANA 1EAAA
chains in the Genus database with same CATH topology
3FOTA 2XR7A 4G0BA 1QCAA 2E1UA 2E1VA 3B2SA 1DPBA 1EAFA 1SCZA 2XHGA 3B30A 1EACA 3U9BA 4JN3A 1EAEA 4HVMA 1CLAA 1CIAA 4KECA 4N72A 1XMCA 1XL8A 1DPDA 3CLAA 3U9FA 1XMDA 1E2OA 3FP0A 1Q9JA 5DUAA 2II5A 3MAEA 1NOCB 2RKVA 2I9DA 5KJVA 4G22A 2ZBAA 4G2MA 3L60A 5KJTA 1EABA 2CLAA 1L5AA 2II4A 5KJWA 1EADA 5KJUA 2VSQA 2BGHA 1PD5A 4KE4A 5DU9A 2RKTA 4JN5A 5FALA 2E1TA 1Q23A 1DPCA 5KJSA 1C4TA 1XL7A 2JGPA 5FANA 2IHWA 4CLAA 1EAAA 2II3A 5T3EA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3FOT A;  2XR7 A;  4G0B A;  1QCA A;  2E1U A;  2E1V A;  3B2S A;  1DPB A;  1EAF A;  1SCZ A;  2XHG A;  3B30 A;  1EAC A;  3U9B A;  4JN3 A;  1EAE A;  4HVM A;  1CLA A;  1CIA A;  4KEC A;  4N72 A;  1XMC A;  1XL8 A;  1DPD A;  3CLA A;  3U9F A;  1XMD A;  1E2O A;  3FP0 A;  1Q9J A;  5DUA A;  2II5 A;  3MAE A;  1NOC B;  2RKV A;  2I9D A;  5KJV A;  4G22 A;  2ZBA A;  4G2M A;  3L60 A;  5KJT A;  1EAB A;  2CLA A;  1L5A A;  2II4 A;  5KJW A;  1EAD A;  5KJU A;  2VSQ A;  2BGH A;  1PD5 A;  4KE4 A;  5DU9 A;  2RKT A;  4JN5 A;  5FAL A;  2E1T A;  1Q23 A;  1DPC A;  5KJS A;  1C4T A;  1XL7 A;  2JGP A;  5FAN A;  2IHW A;  4CLA A;  1EAA A;  2II3 A;  5T3E A; 
#chains in the Genus database with same CATH topology
 3FOT A;  2DEB A;  3B30 A;  1EAC A;  2FY3 A;  1T7Q A;  3U9F A;  1T7N A;  1E2O A;  3MAE A;  2RKV A;  2ZBA A;  1EAB A;  1EAD A;  4KE4 A;  2FY2 A;  5FAL A;  3B2S A;  2IHW A;  1NM8 A;  2XR7 A;  1QCA A;  3U9B A;  1EAE A;  4KEC A;  1XMC A;  2FYO A;  5KJV A;  5KJT A;  1L5A A;  2VSQ A;  1PD5 A;  2RKT A;  2E1T A;  1Q23 A;  5KJS A;  2JGP A;  1XL7 A;  4CLA A;  1EAF A;  1SCZ A;  2H3U A;  2XHG A;  4HVM A;  1CLA A;  1CIA A;  1XL8 A;  3CLA A;  4EP9 A;  2FY4 A;  1Q9J A;  1NOC B;  2I9D A;  4EPH A;  4G22 A;  4G2M A;  3L60 A;  5KJW A;  1NDF A;  1DPC A;  1C4T A;  2RCU A;  2FY5 A;  2II3 A;  5T3E A;  4G0B A;  2E1U A;  2E1V A;  1DPB A;  2H3W A;  4JN3 A;  4EYW A;  4N72 A;  2FW3 A;  1DPD A;  1NDB A;  2H4T A;  1XMD A;  3FP0 A;  5DUA A;  2II5 A;  1T7O A;  2H3P A;  1Q6X A;  2CLA A;  2II4 A;  5KJU A;  2BGH A;  5DU9 A;  1NDI A;  4JN5 A;  1S5O A;  1T1U A;  5FAN A;  1EAA A; 
#chains in the Genus database with same CATH homology
 3FOT A;  2XR7 A;  4G0B A;  1QCA A;  2E1U A;  2E1V A;  3B2S A;  1DPB A;  1EAF A;  1SCZ A;  2XHG A;  3B30 A;  1EAC A;  3U9B A;  4JN3 A;  1EAE A;  4HVM A;  1CLA A;  1CIA A;  4KEC A;  4N72 A;  1XMC A;  1XL8 A;  1DPD A;  3CLA A;  3U9F A;  1XMD A;  1E2O A;  3FP0 A;  1Q9J A;  5DUA A;  2II5 A;  3MAE A;  1NOC B;  2RKV A;  2I9D A;  5KJV A;  4G22 A;  2ZBA A;  4G2M A;  3L60 A;  5KJT A;  1EAB A;  2CLA A;  1L5A A;  2II4 A;  5KJW A;  1EAD A;  5KJU A;  2VSQ A;  2BGH A;  1PD5 A;  4KE4 A;  5DU9 A;  2RKT A;  4JN5 A;  5FAL A;  2E1T A;  1Q23 A;  1DPC A;  5KJS A;  1C4T A;  1XL7 A;  2JGP A;  5FAN A;  2IHW A;  4CLA A;  1EAA A;  2II3 A;  5T3E A; 
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similar chains in the Genus database (?% sequence similarity)
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