3U9FA

Structure of cati in complex with chloramphenicol
Total Genus 54
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
215
structure length
215
Chain Sequence
EKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The structural basis for substrate versatility of chloramphenicol acetyltransferase CAT(I).
pubmed doi rcsb
molecule tags Transferase/antibiotic
source organism Escherichia coli
molecule keywords Chloramphenicol acetyltransferase
total genus 54
structure length 215
sequence length 215
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, R, S
ec nomenclature ec 2.3.1.28: Chloramphenicol O-acetyltransferase.
pdb deposition date 2011-10-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00302 CAT Chloramphenicol acetyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 3u9fA00
2ZBAA 5KJWA 4G2MA 2E1UA 2VSQA 1Q23A 4KE4A 1EABA 4HVMA 1PD5A 1L5AA 2I9DA 1XMCA 1EAAA 1XL8A 1EACA 2IHWA 4CLAA 3U9BA 5T3EA 5DU9A 1EAEA 1C4TA 4KECA 1XMDA 4N72A 3FOTA 3U9FA 1EAFA 5FANA 4G22A 2BGHA 5DUAA 5KJTA 2XR7A 1DPCA 3B2SA 1Q9JA 1XL7A 2II3A 2E1VA 2II4A 2RKTA 3CLAA 4JN5A 1QCAA 5FALA 5KJSA 2CLAA 1CIAA 1NOCB 3B30A 1EADA 2E1TA 3FP0A 3L60A 1DPBA 2II5A 4G0BA 5KJUA 1E2OA 1SCZA 2XHGA 4JN3A 5KJVA 1DPDA 3MAEA 2RKVA 2JGPA 1CLAA
chains in the Genus database with same CATH superfamily
2E1UA 2VSQA 4KE4A 2FY4A 2I9DA 1XMCA 1EAEA 1C4TA 4N72A 3U9FA 5FANA 3B2SA 1NDIA 2E1VA 2II4A 2RKTA 2H3WA 4EPHA 1NOCB 1EADA 3L60A 1DPBA 1S5OA 1SCZA 1DPDA 3MAEA 4EP9A 2RCUA 2FY2A 1EACA 4EYWA 5T3EA 1T7QA 2H3PA 1EAFA 5DUAA 2BGHA 5KJTA 2FW3A 1Q9JA 1XL7A 2FYOA 1Q6XA 3CLAA 4JN5A 1QCAA 2E1TA 1E2OA 2FY3A 1CLAA 2ZBAA 5KJWA 4HVMA 1T1UA 1PD5A 1EAAA 1XL8A 2IHWA 4CLAA 5DU9A 2H3UA 4KECA 1XMDA 3FOTA 1DPCA 1NDBA 5KJSA 3FP0A 1T7OA 4G0BA 2XHGA 2RKVA 4G2MA 1Q23A 1EABA 1L5AA 1T7NA 2H4TA 3U9BA 1NDFA 4G22A 2XR7A 2II3A 5FALA 2FY5A 2CLAA 1CIAA 1NM8A 2DEBA 3B30A 2II5A 5KJUA 4JN3A 5KJVA 2JGPA
chains in the Genus database with same CATH topology
2ZBAA 5KJWA 4G2MA 2E1UA 2VSQA 1Q23A 4KE4A 1EABA 4HVMA 1PD5A 1L5AA 2I9DA 1XMCA 1EAAA 1XL8A 1EACA 2IHWA 4CLAA 3U9BA 5T3EA 5DU9A 1EAEA 1C4TA 4KECA 1XMDA 4N72A 3FOTA 3U9FA 1EAFA 5FANA 4G22A 2BGHA 5DUAA 5KJTA 2XR7A 1DPCA 3B2SA 1Q9JA 1XL7A 2II3A 2E1VA 2II4A 2RKTA 3CLAA 4JN5A 1QCAA 5FALA 5KJSA 2CLAA 1CIAA 1NOCB 3B30A 1EADA 2E1TA 3FP0A 3L60A 1DPBA 2II5A 4G0BA 5KJUA 1E2OA 1SCZA 2XHGA 4JN3A 5KJVA 1DPDA 3MAEA 2RKVA 2JGPA 1CLAA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2ZBA A;  5KJW A;  4G2M A;  2E1U A;  2VSQ A;  1Q23 A;  4KE4 A;  1EAB A;  4HVM A;  1PD5 A;  1L5A A;  2I9D A;  1XMC A;  1EAA A;  1XL8 A;  1EAC A;  2IHW A;  4CLA A;  3U9B A;  5T3E A;  5DU9 A;  1EAE A;  1C4T A;  4KEC A;  1XMD A;  4N72 A;  3FOT A;  3U9F A;  1EAF A;  5FAN A;  4G22 A;  2BGH A;  5DUA A;  5KJT A;  2XR7 A;  1DPC A;  3B2S A;  1Q9J A;  1XL7 A;  2II3 A;  2E1V A;  2II4 A;  2RKT A;  3CLA A;  4JN5 A;  1QCA A;  5FAL A;  5KJS A;  2CLA A;  1CIA A;  1NOC B;  3B30 A;  1EAD A;  2E1T A;  3FP0 A;  3L60 A;  1DPB A;  2II5 A;  4G0B A;  5KJU A;  1E2O A;  1SCZ A;  2XHG A;  4JN3 A;  5KJV A;  1DPD A;  3MAE A;  2RKV A;  2JGP A;  1CLA A; 
#chains in the Genus database with same CATH topology
 2E1U A;  2VSQ A;  4KE4 A;  2FY4 A;  2I9D A;  1XMC A;  1EAE A;  1C4T A;  4N72 A;  3U9F A;  5FAN A;  3B2S A;  1NDI A;  2E1V A;  2II4 A;  2RKT A;  2H3W A;  4EPH A;  1NOC B;  1EAD A;  3L60 A;  1DPB A;  1S5O A;  1SCZ A;  1DPD A;  3MAE A;  4EP9 A;  2RCU A;  2FY2 A;  1EAC A;  4EYW A;  5T3E A;  1T7Q A;  2H3P A;  1EAF A;  5DUA A;  2BGH A;  5KJT A;  2FW3 A;  1Q9J A;  1XL7 A;  2FYO A;  1Q6X A;  3CLA A;  4JN5 A;  1QCA A;  2E1T A;  1E2O A;  2FY3 A;  1CLA A;  2ZBA A;  5KJW A;  4HVM A;  1T1U A;  1PD5 A;  1EAA A;  1XL8 A;  2IHW A;  4CLA A;  5DU9 A;  2H3U A;  4KEC A;  1XMD A;  3FOT A;  1DPC A;  1NDB A;  5KJS A;  3FP0 A;  1T7O A;  4G0B A;  2XHG A;  2RKV A;  4G2M A;  1Q23 A;  1EAB A;  1L5A A;  1T7N A;  2H4T A;  3U9B A;  1NDF A;  4G22 A;  2XR7 A;  2II3 A;  5FAL A;  2FY5 A;  2CLA A;  1CIA A;  1NM8 A;  2DEB A;  3B30 A;  2II5 A;  5KJU A;  4JN3 A;  5KJV A;  2JGP A; 
#chains in the Genus database with same CATH homology
 2ZBA A;  5KJW A;  4G2M A;  2E1U A;  2VSQ A;  1Q23 A;  4KE4 A;  1EAB A;  4HVM A;  1PD5 A;  1L5A A;  2I9D A;  1XMC A;  1EAA A;  1XL8 A;  1EAC A;  2IHW A;  4CLA A;  3U9B A;  5T3E A;  5DU9 A;  1EAE A;  1C4T A;  4KEC A;  1XMD A;  4N72 A;  3FOT A;  3U9F A;  1EAF A;  5FAN A;  4G22 A;  2BGH A;  5DUA A;  5KJT A;  2XR7 A;  1DPC A;  3B2S A;  1Q9J A;  1XL7 A;  2II3 A;  2E1V A;  2II4 A;  2RKT A;  3CLA A;  4JN5 A;  1QCA A;  5FAL A;  5KJS A;  2CLA A;  1CIA A;  1NOC B;  3B30 A;  1EAD A;  2E1T A;  3FP0 A;  3L60 A;  1DPB A;  2II5 A;  4G0B A;  5KJU A;  1E2O A;  1SCZ A;  2XHG A;  4JN3 A;  5KJV A;  1DPD A;  3MAE A;  2RKV A;  2JGP A;  1CLA A; 
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similar chains in the Genus database (?% sequence similarity)
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