3U9FA

Structure of cati in complex with chloramphenicol
Total Genus 54
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
54
sequence length
215
structure length
215
Chain Sequence
EKKITGYTTVDISQWHRKEHFEAFQSVAQCTYNQTVQLDITAFLKTVKKNKHKFYPAFIHILARLMNAHPEFRMAMKDGELVIWDSVHPCYTVFHEQTETFSSLWSEYHDDFRQFLHIYSQDVACYGENLAYFPKGFIENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQ
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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publication title The structural basis for substrate versatility of chloramphenicol acetyltransferase CAT(I).
pubmed doi rcsb
molecule tags Transferase/antibiotic
source organism Escherichia coli
molecule keywords Chloramphenicol acetyltransferase
total genus 54
structure length 215
sequence length 215
chains with identical sequence B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, R, S
ec nomenclature ec 2.3.1.28: Chloramphenicol O-acetyltransferase.
pdb deposition date 2011-10-18

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00302 CAT Chloramphenicol acetyltransferase
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.30.559.10 Alpha Beta 2-Layer Sandwich Chloramphenicol Acetyltransferase Chloramphenicol acetyltransferase-like domain 3u9fA00
1E2OA 1DPCA 1XL8A 5KJVA 1CIAA 1EABA 3B2SA 3MAEA 1EADA 4JN5A 4KECA 4N72A 1EAAA 3CLAA 1EAFA 5FALA 5KJWA 1NOCB 1EAEA 2II4A 2E1VA 4CLAA 2I9DA 4G22A 2JGPA 1DPBA 2II3A 2II5A 2VSQA 1SCZA 3B30A 3U9BA 1XMDA 3FP0A 1Q9JA 2E1UA 2IHWA 1EACA 4G2MA 1L5AA 4KE4A 2ZBAA 1DPDA 4G0BA 4HVMA 3FOTA 3L60A 4JN3A 3U9FA 5KJUA 5T3EA 5KJSA 5FANA 1QCAA 1XMCA 2BGHA 2E1TA 2XR7A 5DUAA 1CLAA 2XHGA 1C4TA 1XL7A 5DU9A 1PD5A 1Q23A 5KJTA 2RKTA 2CLAA 2RKVA
chains in the Genus database with same CATH superfamily
1DPCA 1T7NA 1XL8A 1EADA 4JN5A 4EYWA 1EAAA 3CLAA 5KJWA 2H4TA 4G22A 2VSQA 1SCZA 1XMDA 1T7QA 1S5OA 2ZBAA 1DPDA 4EP9A 5KJUA 5KJSA 5T3EA 1QCAA 2BGHA 1XL7A 2RKTA 2RKVA 5KJVA 1CIAA 1EABA 3MAEA 2FY2A 2H3WA 2FY4A 2JGPA 1DPBA 2II5A 3FP0A 4G2MA 1T1UA 4KE4A 2FW3A 4G0BA 4HVMA 3L60A 2DEBA 5DUAA 2XHGA 5DU9A 1NDIA 3B2SA 4KECA 4N72A 1NOCB 1EAEA 2II4A 2E1VA 4CLAA 3U9BA 2IHWA 1EACA 2FYOA 1L5AA 4JN3A 1NDBA 2E1TA 2XR7A 1NDFA 1CLAA 1C4TA 4EPHA 1XMCA 5FANA 1E2OA 2RCUA 1EAFA 2H3UA 2H3PA 2I9DA 1T7OA 2II3A 3B30A 1Q9JA 2E1UA 1NM8A 2FY3A 3FOTA 3U9FA 2FY5A 5KJTA 1Q6XA 1PD5A 1Q23A 5FALA 2CLAA
chains in the Genus database with same CATH topology
1E2OA 1DPCA 1XL8A 5KJVA 1CIAA 1EABA 3B2SA 3MAEA 1EADA 4JN5A 4KECA 4N72A 1EAAA 3CLAA 1EAFA 5FALA 5KJWA 1NOCB 1EAEA 2II4A 2E1VA 4CLAA 2I9DA 4G22A 2JGPA 1DPBA 2II3A 2II5A 2VSQA 1SCZA 3B30A 3U9BA 1XMDA 3FP0A 1Q9JA 2E1UA 2IHWA 1EACA 4G2MA 1L5AA 4KE4A 2ZBAA 1DPDA 4G0BA 4HVMA 3FOTA 3L60A 4JN3A 3U9FA 5KJUA 5T3EA 5KJSA 5FANA 1QCAA 1XMCA 2BGHA 2E1TA 2XR7A 5DUAA 1CLAA 2XHGA 1C4TA 1XL7A 5DU9A 1PD5A 1Q23A 5KJTA 2RKTA 2CLAA 2RKVA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1E2O A;  1DPC A;  1XL8 A;  5KJV A;  1CIA A;  1EAB A;  3B2S A;  3MAE A;  1EAD A;  4JN5 A;  4KEC A;  4N72 A;  1EAA A;  3CLA A;  1EAF A;  5FAL A;  5KJW A;  1NOC B;  1EAE A;  2II4 A;  2E1V A;  4CLA A;  2I9D A;  4G22 A;  2JGP A;  1DPB A;  2II3 A;  2II5 A;  2VSQ A;  1SCZ A;  3B30 A;  3U9B A;  1XMD A;  3FP0 A;  1Q9J A;  2E1U A;  2IHW A;  1EAC A;  4G2M A;  1L5A A;  4KE4 A;  2ZBA A;  1DPD A;  4G0B A;  4HVM A;  3FOT A;  3L60 A;  4JN3 A;  3U9F A;  5KJU A;  5T3E A;  5KJS A;  5FAN A;  1QCA A;  1XMC A;  2BGH A;  2E1T A;  2XR7 A;  5DUA A;  1CLA A;  2XHG A;  1C4T A;  1XL7 A;  5DU9 A;  1PD5 A;  1Q23 A;  5KJT A;  2RKT A;  2CLA A;  2RKV A; 
#chains in the Genus database with same CATH topology
 1DPC A;  1T7N A;  1XL8 A;  1EAD A;  4JN5 A;  4EYW A;  1EAA A;  3CLA A;  5KJW A;  2H4T A;  4G22 A;  2VSQ A;  1SCZ A;  1XMD A;  1T7Q A;  1S5O A;  2ZBA A;  1DPD A;  4EP9 A;  5KJU A;  5KJS A;  5T3E A;  1QCA A;  2BGH A;  1XL7 A;  2RKT A;  2RKV A;  5KJV A;  1CIA A;  1EAB A;  3MAE A;  2FY2 A;  2H3W A;  2FY4 A;  2JGP A;  1DPB A;  2II5 A;  3FP0 A;  4G2M A;  1T1U A;  4KE4 A;  2FW3 A;  4G0B A;  4HVM A;  3L60 A;  2DEB A;  5DUA A;  2XHG A;  5DU9 A;  1NDI A;  3B2S A;  4KEC A;  4N72 A;  1NOC B;  1EAE A;  2II4 A;  2E1V A;  4CLA A;  3U9B A;  2IHW A;  1EAC A;  2FYO A;  1L5A A;  4JN3 A;  1NDB A;  2E1T A;  2XR7 A;  1NDF A;  1CLA A;  1C4T A;  4EPH A;  1XMC A;  5FAN A;  1E2O A;  2RCU A;  1EAF A;  2H3U A;  2H3P A;  2I9D A;  1T7O A;  2II3 A;  3B30 A;  1Q9J A;  2E1U A;  1NM8 A;  2FY3 A;  3FOT A;  3U9F A;  2FY5 A;  5KJT A;  1Q6X A;  1PD5 A;  1Q23 A;  5FAL A;  2CLA A; 
#chains in the Genus database with same CATH homology
 1E2O A;  1DPC A;  1XL8 A;  5KJV A;  1CIA A;  1EAB A;  3B2S A;  3MAE A;  1EAD A;  4JN5 A;  4KEC A;  4N72 A;  1EAA A;  3CLA A;  1EAF A;  5FAL A;  5KJW A;  1NOC B;  1EAE A;  2II4 A;  2E1V A;  4CLA A;  2I9D A;  4G22 A;  2JGP A;  1DPB A;  2II3 A;  2II5 A;  2VSQ A;  1SCZ A;  3B30 A;  3U9B A;  1XMD A;  3FP0 A;  1Q9J A;  2E1U A;  2IHW A;  1EAC A;  4G2M A;  1L5A A;  4KE4 A;  2ZBA A;  1DPD A;  4G0B A;  4HVM A;  3FOT A;  3L60 A;  4JN3 A;  3U9F A;  5KJU A;  5T3E A;  5KJS A;  5FAN A;  1QCA A;  1XMC A;  2BGH A;  2E1T A;  2XR7 A;  5DUA A;  1CLA A;  2XHG A;  1C4T A;  1XL7 A;  5DU9 A;  1PD5 A;  1Q23 A;  5KJT A;  2RKT A;  2CLA A;  2RKV A; 
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similar chains in the Genus database (?% sequence similarity)
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#similar chains in the Genus database (?% sequence similarity)
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