1T3YA

Three crystal structures of human coactosin-like protein
Total Genus 46
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
131
structure length
131
Chain Sequence
ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKA
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
Updating...
connected with : NaN
publication title Three Crystal Structures of Human Coactosin-like Protein
rcsb
molecule tags Protein binding
source organism Homo sapiens
molecule keywords Coactosin-like protein
total genus 46
structure length 131
sequence length 131
ec nomenclature
pdb deposition date 2004-04-28

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00241 Cofilin_ADF Cofilin/tropomyosin-type actin-binding protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1t3yA00
5KYWB 3EGDA 3FFKA 2VIKA 2FH4A 2KVKA 2VACA 2D8BA 1J72A 1M2VA 5A1MA 2NUPA 2FF6G 5KYUB 3DAWB 1D0NA 1P8ZG 2NUTB 1AHQA 3EFOA 1MDUA 2FF3A 5L6WC 2HD7A 3L50A 3FG7A 1AK6A 1F7SA 2LXXA 3Q2BA 2FH2A 1EQYS 5DD2A 5FAEA 1T2LA 1X67A 3FFNA 5KYXA 1RGIG 1D4XG 1VFQA 3EGXB 3EG9A 4KEEA 1ESVS 4CBXG 2LJ8A 1QPVA 1YAGG 5FAFA 3CJCG 5KYNA 5KYYA 3CI5G 3EGDB 1SVYA 1YVNG 1SVQA 4KEDA 1DEJS 4Z94G 1M2VB 2NUPB 2FH1A 4CBWG 3TU5B 1PD0A 1PD1A 2NUTA 1V6FA 1T3YA 4PKIG 1TVJA 5HVKB 1VKKA 2W0IA 1P8XA 2MV2A 3A5NS 1NMDG 5IVUA 2XFAA 2XF1A 2L72A 5KYXB 1HQZ1 1NPHA 1T44G 3A5LS 5HVKD 3EG9B 1C0FS 1COFA 3CJBG 5KYWA 1JHWA 1CNUA 2MOTA 1Q8GA 2QTVA 1CFYA 2VILA 2FH3A 1WM4A 5KYYB 1KCQA 3A5MS 1NM1G 4PKHB 1C0GS 5KYUA 3EFOB 4JD2H 1H1VG 4LIZA 1NLVG 1SVRA 4BEX1 1WNJA 4CBUG 1AK7A 2LLFA 1M2OA 1WFSA 1TMWA 3EH1A 4S10C 3EH2A 1T3XA 3EGXA 4KEFA 2FGHA 3CIPG 1UDMA 1PCXA 2MP4A 2I2QA 3A5OS 4PKGG 1M4JA 3FG6A 1Q8XA
chains in the Genus database with same CATH superfamily
5KYWB 3EGDA 3FFKA 2VIKA 2FH4A 2KVKA 2VACA 2D8BA 1J72A 1M2VA 5A1MA 2NUPA 2FF6G 5KYUB 3DAWB 1D0NA 1P8ZG 2NUTB 1AHQA 3EFOA 1MDUA 2FF3A 5L6WC 2HD7A 3L50A 3FG7A 1AK6A 1F7SA 2LXXA 3Q2BA 2FH2A 1EQYS 5DD2A 5FAEA 1T2LA 1X67A 3FFNA 5KYXA 1RGIG 1D4XG 1VFQA 3EGXB 3EG9A 4KEEA 1ESVS 4CBXG 2LJ8A 1QPVA 1YAGG 5FAFA 3CJCG 5KYNA 5KYYA 3CI5G 3EGDB 1SVYA 1YVNG 1SVQA 4KEDA 3DA7A 1DEJS 4Z94G 1M2VB 2NUPB 2FH1A 4CBWG 3TU5B 1PD0A 1PD1A 2NUTA 1V6FA 1T3YA 4PKIG 1TVJA 5HVKB 1VKKA 2W0IA 1P8XA 2MV2A 3A5NS 1NMDG 5IVUA 2XFAA 2XF1A 2L72A 5KYXB 1HQZ1 1NPHA 1T44G 3A5LS 5HVKD 3EG9B 1C0FS 1COFA 3CJBG 5KYWA 1JHWA 1CNUA 2MOTA 1Q8GA 2QTVA 1CFYA 2VILA 2FH3A 1WM4A 5KYYB 1KCQA 3A5MS 1NM1G 4PKHB 1C0GS 5KYUA 3EFOB 4JD2H 1H1VG 4LIZA 1NLVG 1SVRA 4BEX1 1WNJA 4CBUG 1AK7A 2LLFA 1M2OA 1WFSA 1TMWA 3EH1A 4S10C 3EH2A 1T3XA 3EGXA 4KEFA 2FGHA 3CIPG 1UDMA 1PCXA 2MP4A 2I2QA 3A5OS 4PKGG 1M4JA 3FG6A 1Q8XA
chains in the Genus database with same CATH topology
5KYWB 3EGDA 3FFKA 2VIKA 2FH4A 2KVKA 2VACA 2D8BA 1J72A 1M2VA 5A1MA 2NUPA 2FF6G 5KYUB 3DAWB 1D0NA 1P8ZG 2NUTB 1AHQA 3EFOA 1MDUA 2FF3A 5L6WC 2HD7A 3L50A 3FG7A 1AK6A 1F7SA 2LXXA 3Q2BA 2FH2A 1EQYS 5DD2A 5FAEA 1T2LA 1X67A 3FFNA 5KYXA 1RGIG 1D4XG 1VFQA 3EGXB 3EG9A 4KEEA 1ESVS 4CBXG 2LJ8A 1QPVA 1YAGG 5FAFA 3CJCG 5KYNA 5KYYA 3CI5G 3EGDB 1SVYA 1YVNG 1SVQA 4KEDA 3DA7A 1DEJS 4Z94G 1M2VB 2NUPB 2FH1A 4CBWG 3TU5B 1PD0A 1PD1A 2NUTA 1V6FA 1T3YA 4PKIG 1TVJA 5HVKB 1VKKA 2W0IA 1P8XA 2MV2A 3A5NS 1NMDG 5IVUA 2XFAA 2XF1A 2L72A 5KYXB 1HQZ1 1NPHA 1T44G 3A5LS 5HVKD 3EG9B 1C0FS 1COFA 3CJBG 5KYWA 1JHWA 1CNUA 2MOTA 1Q8GA 2QTVA 1CFYA 2VILA 2FH3A 1WM4A 5KYYB 1KCQA 3A5MS 1NM1G 4PKHB 1C0GS 5KYUA 3EFOB 4JD2H 1H1VG 4LIZA 1NLVG 1SVRA 4BEX1 1WNJA 4CBUG 1AK7A 2LLFA 1M2OA 1WFSA 1TMWA 3EH1A 4S10C 3EH2A 1T3XA 3EGXA 4KEFA 2FGHA 3CIPG 1UDMA 1PCXA 2MP4A 2I2QA 3A5OS 4PKGG 1M4JA 3FG6A 1Q8XA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 5KYW B;  3EGD A;  3FFK A;  2VIK A;  2FH4 A;  2KVK A;  2VAC A;  2D8B A;  1J72 A;  1M2V A;  5A1M A;  2NUP A;  2FF6 G;  5KYU B;  3DAW B;  1D0N A;  1P8Z G;  2NUT B;  1AHQ A;  3EFO A;  1MDU A;  2FF3 A;  5L6W C;  2HD7 A;  3L50 A;  3FG7 A;  1AK6 A;  1F7S A;  2LXX A;  3Q2B A;  2FH2 A;  1EQY S;  5DD2 A;  5FAE A;  1T2L A;  1X67 A;  3FFN A;  5KYX A;  1RGI G;  1D4X G;  1VFQ A;  3EGX B;  3EG9 A;  4KEE A;  1ESV S;  4CBX G;  2LJ8 A;  1QPV A;  1YAG G;  5FAF A;  3CJC G;  5KYN A;  5KYY A;  3CI5 G;  3EGD B;  1SVY A;  1YVN G;  1SVQ A;  4KED A;  1DEJ S;  4Z94 G;  1M2V B;  2NUP B;  2FH1 A;  4CBW G;  3TU5 B;  1PD0 A;  1PD1 A;  2NUT A;  1V6F A;  1T3Y A;  4PKI G;  1TVJ A;  5HVK B;  1VKK A;  2W0I A;  1P8X A;  2MV2 A;  3A5N S;  1NMD G;  5IVU A;  2XFA A;  2XF1 A;  2L72 A;  5KYX B;  1HQZ 1;  1NPH A;  1T44 G;  3A5L S;  5HVK D;  3EG9 B;  1C0F S;  1COF A;  3CJB G;  5KYW A;  1JHW A;  1CNU A;  2MOT A;  1Q8G A;  2QTV A;  1CFY A;  2VIL A;  2FH3 A;  1WM4 A;  5KYY B;  1KCQ A;  3A5M S;  1NM1 G;  4PKH B;  1C0G S;  5KYU A;  3EFO B;  4JD2 H;  1H1V G;  4LIZ A;  1NLV G;  1SVR A;  4BEX 1;  1WNJ A;  4CBU G;  1AK7 A;  2LLF A;  1M2O A;  1WFS A;  1TMW A;  3EH1 A;  4S10 C;  3EH2 A;  1T3X A;  3EGX A;  4KEF A;  2FGH A;  3CIP G;  1UDM A;  1PCX A;  2MP4 A;  2I2Q A;  3A5O S;  4PKG G;  1M4J A;  3FG6 A;  1Q8X A; 
#chains in the Genus database with same CATH topology
 5KYW B;  3EGD A;  3FFK A;  2VIK A;  2FH4 A;  2KVK A;  2VAC A;  2D8B A;  1J72 A;  1M2V A;  5A1M A;  2NUP A;  2FF6 G;  5KYU B;  3DAW B;  1D0N A;  1P8Z G;  2NUT B;  1AHQ A;  3EFO A;  1MDU A;  2FF3 A;  5L6W C;  2HD7 A;  3L50 A;  3FG7 A;  1AK6 A;  1F7S A;  2LXX A;  3Q2B A;  2FH2 A;  1EQY S;  5DD2 A;  5FAE A;  1T2L A;  1X67 A;  3FFN A;  5KYX A;  1RGI G;  1D4X G;  1VFQ A;  3EGX B;  3EG9 A;  4KEE A;  1ESV S;  4CBX G;  2LJ8 A;  1QPV A;  1YAG G;  5FAF A;  3CJC G;  5KYN A;  5KYY A;  3CI5 G;  3EGD B;  1SVY A;  1YVN G;  1SVQ A;  4KED A;  3DA7 A;  1DEJ S;  4Z94 G;  1M2V B;  2NUP B;  2FH1 A;  4CBW G;  3TU5 B;  1PD0 A;  1PD1 A;  2NUT A;  1V6F A;  1T3Y A;  4PKI G;  1TVJ A;  5HVK B;  1VKK A;  2W0I A;  1P8X A;  2MV2 A;  3A5N S;  1NMD G;  5IVU A;  2XFA A;  2XF1 A;  2L72 A;  5KYX B;  1HQZ 1;  1NPH A;  1T44 G;  3A5L S;  5HVK D;  3EG9 B;  1C0F S;  1COF A;  3CJB G;  5KYW A;  1JHW A;  1CNU A;  2MOT A;  1Q8G A;  2QTV A;  1CFY A;  2VIL A;  2FH3 A;  1WM4 A;  5KYY B;  1KCQ A;  3A5M S;  1NM1 G;  4PKH B;  1C0G S;  5KYU A;  3EFO B;  4JD2 H;  1H1V G;  4LIZ A;  1NLV G;  1SVR A;  4BEX 1;  1WNJ A;  4CBU G;  1AK7 A;  2LLF A;  1M2O A;  1WFS A;  1TMW A;  3EH1 A;  4S10 C;  3EH2 A;  1T3X A;  3EGX A;  4KEF A;  2FGH A;  3CIP G;  1UDM A;  1PCX A;  2MP4 A;  2I2Q A;  3A5O S;  4PKG G;  1M4J A;  3FG6 A;  1Q8X A; 
#chains in the Genus database with same CATH homology
 5KYW B;  3EGD A;  3FFK A;  2VIK A;  2FH4 A;  2KVK A;  2VAC A;  2D8B A;  1J72 A;  1M2V A;  5A1M A;  2NUP A;  2FF6 G;  5KYU B;  3DAW B;  1D0N A;  1P8Z G;  2NUT B;  1AHQ A;  3EFO A;  1MDU A;  2FF3 A;  5L6W C;  2HD7 A;  3L50 A;  3FG7 A;  1AK6 A;  1F7S A;  2LXX A;  3Q2B A;  2FH2 A;  1EQY S;  5DD2 A;  5FAE A;  1T2L A;  1X67 A;  3FFN A;  5KYX A;  1RGI G;  1D4X G;  1VFQ A;  3EGX B;  3EG9 A;  4KEE A;  1ESV S;  4CBX G;  2LJ8 A;  1QPV A;  1YAG G;  5FAF A;  3CJC G;  5KYN A;  5KYY A;  3CI5 G;  3EGD B;  1SVY A;  1YVN G;  1SVQ A;  4KED A;  3DA7 A;  1DEJ S;  4Z94 G;  1M2V B;  2NUP B;  2FH1 A;  4CBW G;  3TU5 B;  1PD0 A;  1PD1 A;  2NUT A;  1V6F A;  1T3Y A;  4PKI G;  1TVJ A;  5HVK B;  1VKK A;  2W0I A;  1P8X A;  2MV2 A;  3A5N S;  1NMD G;  5IVU A;  2XFA A;  2XF1 A;  2L72 A;  5KYX B;  1HQZ 1;  1NPH A;  1T44 G;  3A5L S;  5HVK D;  3EG9 B;  1C0F S;  1COF A;  3CJB G;  5KYW A;  1JHW A;  1CNU A;  2MOT A;  1Q8G A;  2QTV A;  1CFY A;  2VIL A;  2FH3 A;  1WM4 A;  5KYY B;  1KCQ A;  3A5M S;  1NM1 G;  4PKH B;  1C0G S;  5KYU A;  3EFO B;  4JD2 H;  1H1V G;  4LIZ A;  1NLV G;  1SVR A;  4BEX 1;  1WNJ A;  4CBU G;  1AK7 A;  2LLF A;  1M2O A;  1WFS A;  1TMW A;  3EH1 A;  4S10 C;  3EH2 A;  1T3X A;  3EGX A;  4KEF A;  2FGH A;  3CIP G;  1UDM A;  1PCX A;  2MP4 A;  2I2Q A;  3A5O S;  4PKG G;  1M4J A;  3FG6 A;  1Q8X A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...