1YVNG

The yeast actin val 159 asn mutant complex with human gelsolin segment 1.
Total Genus 39

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
39
sequence length
125
structure length
125
Chain Sequence
MVVEHPEFLKAGKEPGLQIWRVEKFDLVPVPTNLYGDFFTGDAYVILKTVQLRNGNLQYDLHYWLGNECSQDESGAAAIFTVQLDDYLNGRAVQHREVQGFESATFLGYFKSGLKYKKGGVASGF

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
AH1 (6-10)TII1 (10-13)S1 (16-23)S5 (57-65)EMPTYTI2 (32-35)TI3 (39-42)TI1 (31-34)S3 (37-39)S7 (115-117)TII2 (34-37)S4 (43-51)TI4 (52-55)TVIII1 (108-111)TIV2 (99-102)TII3 (98-101)TI5 (66-69)AH2 (71-88)S6 (92-98)AH3 (104-108)TI6 (110-113)S2 (26-29)TI'2 (88-91)Updating...
connected with : NaN
publication title Crystal structure of yeast actin V159N mutant
rcsb
molecule keywords PROTEIN (ACTIN)
molecule tags Structural protein
source organism Homo sapiens
total genus 39
structure length 125
sequence length 125
ec nomenclature
pdb deposition date 1999-03-23

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
G PF00626 Gelsolin Gelsolin repeat
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 1yvnG00
3Q2BA 5FAEA 5L6WC 1UDMA 1P8ZG 1V6FA 1X67A 1WNJA 3EGXA 3A5NS 5KYWA 5KYXB 4Z94G 3EGXB 2NUPB 2FH3A 1T3YA 5HVKD 1EQYS 4KEDA 3FG7A 4PKGG 1C0GS 3A5LS 2FH2A 3L50A 1M2OA 2XFAA 2HD7A 4JD2H 1TMWA 5KYWB 1AHQA 1T44G 1NLVG 2FH1A 1C0FS 1NM1G 2VIKA 2MV2A 1AK7A 4KEFA 2MOTA 3CJBG 4S10C 2FF3A 1M4JA 1M2VA 1P8XA 3EG9B 3EGDA 1COFA 2L72A 4PKHB 5IVUA 1JHWA 2LXXA 3CI5G 2VACA 2NUTA 3EH2A 5KYYA 1PD1A 1NPHA 3EG9A 2QTVA 5KYUB 5A1MA 4KEEA 1QPVA 1DEJS 5KYNA 1CNUA 1M2VB 3EGDB 2FGHA 5KYUA 2MP4A 3FFKA 3FG6A 1T2LA 1ESVS 2NUTB 2KVKA 5HVKB 4CBUG 1HQZ1 5KYYB 1Q8GA 1T3XA 1VKKA 5DD2A 1WFSA 4BEX1 1MDUA 1D4XG 1NMDG 2XF1A 3EH1A 3DAWB 4CBWG 3EFOA 4PKIG 2LJ8A 5FAFA 1H1VG 2I2QA 1AK6A 3CJCG 1TVJA 3CIPG 1KCQA 1SVQA 1SVRA 1D0NA 1SVYA 3A5MS 2LLFA 5KYXA 2W0IA 3FFNA 1PD0A 1RGIG 1Q8XA 1YVNG 2VILA 2FF6G 2D8BA 2NUPA 3TU5B 4LIZA 1F7SA 3EFOB 2FH4A 1J72A 1PCXA 1YAGG 3A5OS 4CBXG 1CFYA 1WM4A 1VFQA
chains in the Genus database with same CATH superfamily
3Q2BA 5FAEA 5L6WC 1UDMA 1P8ZG 1V6FA 1X67A 1WNJA 3EGXA 3A5NS 5KYWA 5KYXB 4Z94G 3EGXB 2NUPB 2FH3A 1T3YA 5HVKD 1EQYS 4KEDA 3FG7A 4PKGG 1C0GS 3A5LS 2FH2A 3L50A 1M2OA 2XFAA 2HD7A 4JD2H 1TMWA 5KYWB 1AHQA 1T44G 1NLVG 2FH1A 1C0FS 1NM1G 2VIKA 2MV2A 1AK7A 4KEFA 2MOTA 3CJBG 4S10C 2FF3A 1M4JA 1M2VA 1P8XA 3EG9B 3EGDA 1COFA 2L72A 4PKHB 5IVUA 1JHWA 2LXXA 3CI5G 2VACA 2NUTA 3EH2A 5KYYA 1PD1A 1NPHA 3EG9A 2QTVA 5KYUB 5A1MA 4KEEA 1QPVA 1DEJS 5KYNA 1CNUA 1M2VB 3EGDB 2FGHA 5KYUA 2MP4A 3FFKA 3FG6A 1T2LA 1ESVS 2NUTB 2KVKA 3DA7A 5HVKB 4CBUG 1HQZ1 5KYYB 1Q8GA 1T3XA 1VKKA 5DD2A 1WFSA 4BEX1 1MDUA 1D4XG 1NMDG 2XF1A 3EH1A 3DAWB 4CBWG 3EFOA 4PKIG 2LJ8A 5FAFA 1H1VG 2I2QA 1AK6A 3CJCG 1TVJA 3CIPG 1KCQA 1SVQA 1SVRA 1D0NA 1SVYA 3A5MS 2LLFA 5KYXA 2W0IA 3FFNA 1PD0A 1RGIG 1Q8XA 1YVNG 2VILA 2FF6G 2D8BA 2NUPA 3TU5B 4LIZA 1F7SA 3EFOB 2FH4A 1J72A 1PCXA 1YAGG 3A5OS 4CBXG 1CFYA 1WM4A 1VFQA
chains in the Genus database with same CATH topology
3Q2BA 5FAEA 5L6WC 1UDMA 1P8ZG 1V6FA 1X67A 1WNJA 3EGXA 3A5NS 5KYWA 5KYXB 4Z94G 3EGXB 2NUPB 2FH3A 1T3YA 5HVKD 1EQYS 4KEDA 3FG7A 4PKGG 1C0GS 3A5LS 2FH2A 3L50A 1M2OA 2XFAA 2HD7A 4JD2H 1TMWA 5KYWB 1AHQA 1T44G 1NLVG 2FH1A 1C0FS 1NM1G 2VIKA 2MV2A 1AK7A 4KEFA 2MOTA 3CJBG 4S10C 2FF3A 1M4JA 1M2VA 1P8XA 3EG9B 3EGDA 1COFA 2L72A 4PKHB 5IVUA 1JHWA 2LXXA 3CI5G 2VACA 2NUTA 3EH2A 5KYYA 1PD1A 1NPHA 3EG9A 2QTVA 5KYUB 5A1MA 4KEEA 1QPVA 1DEJS 5KYNA 1CNUA 1M2VB 3EGDB 2FGHA 5KYUA 2MP4A 3FFKA 3FG6A 1T2LA 1ESVS 2NUTB 2KVKA 3DA7A 5HVKB 4CBUG 1HQZ1 5KYYB 1Q8GA 1T3XA 1VKKA 5DD2A 1WFSA 4BEX1 1MDUA 1D4XG 1NMDG 2XF1A 3EH1A 3DAWB 4CBWG 3EFOA 4PKIG 2LJ8A 5FAFA 1H1VG 2I2QA 1AK6A 3CJCG 1TVJA 3CIPG 1KCQA 1SVQA 1SVRA 1D0NA 1SVYA 3A5MS 2LLFA 5KYXA 2W0IA 3FFNA 1PD0A 1RGIG 1Q8XA 1YVNG 2VILA 2FF6G 2D8BA 2NUPA 3TU5B 4LIZA 1F7SA 3EFOB 2FH4A 1J72A 1PCXA 1YAGG 3A5OS 4CBXG 1CFYA 1WM4A 1VFQA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3Q2B A;  5FAE A;  5L6W C;  1UDM A;  1P8Z G;  1V6F A;  1X67 A;  1WNJ A;  3EGX A;  3A5N S;  5KYW A;  5KYX B;  4Z94 G;  3EGX B;  2NUP B;  2FH3 A;  1T3Y A;  5HVK D;  1EQY S;  4KED A;  3FG7 A;  4PKG G;  1C0G S;  3A5L S;  2FH2 A;  3L50 A;  1M2O A;  2XFA A;  2HD7 A;  4JD2 H;  1TMW A;  5KYW B;  1AHQ A;  1T44 G;  1NLV G;  2FH1 A;  1C0F S;  1NM1 G;  2VIK A;  2MV2 A;  1AK7 A;  4KEF A;  2MOT A;  3CJB G;  4S10 C;  2FF3 A;  1M4J A;  1M2V A;  1P8X A;  3EG9 B;  3EGD A;  1COF A;  2L72 A;  4PKH B;  5IVU A;  1JHW A;  2LXX A;  3CI5 G;  2VAC A;  2NUT A;  3EH2 A;  5KYY A;  1PD1 A;  1NPH A;  3EG9 A;  2QTV A;  5KYU B;  5A1M A;  4KEE A;  1QPV A;  1DEJ S;  5KYN A;  1CNU A;  1M2V B;  3EGD B;  2FGH A;  5KYU A;  2MP4 A;  3FFK A;  3FG6 A;  1T2L A;  1ESV S;  2NUT B;  2KVK A;  5HVK B;  4CBU G;  1HQZ 1;  5KYY B;  1Q8G A;  1T3X A;  1VKK A;  5DD2 A;  1WFS A;  4BEX 1;  1MDU A;  1D4X G;  1NMD G;  2XF1 A;  3EH1 A;  3DAW B;  4CBW G;  3EFO A;  4PKI G;  2LJ8 A;  5FAF A;  1H1V G;  2I2Q A;  1AK6 A;  3CJC G;  1TVJ A;  3CIP G;  1KCQ A;  1SVQ A;  1SVR A;  1D0N A;  1SVY A;  3A5M S;  2LLF A;  5KYX A;  2W0I A;  3FFN A;  1PD0 A;  1RGI G;  1Q8X A;  1YVN G;  2VIL A;  2FF6 G;  2D8B A;  2NUP A;  3TU5 B;  4LIZ A;  1F7S A;  3EFO B;  2FH4 A;  1J72 A;  1PCX A;  1YAG G;  3A5O S;  4CBX G;  1CFY A;  1WM4 A;  1VFQ A; 
#chains in the Genus database with same CATH topology
 3Q2B A;  5FAE A;  5L6W C;  1UDM A;  1P8Z G;  1V6F A;  1X67 A;  1WNJ A;  3EGX A;  3A5N S;  5KYW A;  5KYX B;  4Z94 G;  3EGX B;  2NUP B;  2FH3 A;  1T3Y A;  5HVK D;  1EQY S;  4KED A;  3FG7 A;  4PKG G;  1C0G S;  3A5L S;  2FH2 A;  3L50 A;  1M2O A;  2XFA A;  2HD7 A;  4JD2 H;  1TMW A;  5KYW B;  1AHQ A;  1T44 G;  1NLV G;  2FH1 A;  1C0F S;  1NM1 G;  2VIK A;  2MV2 A;  1AK7 A;  4KEF A;  2MOT A;  3CJB G;  4S10 C;  2FF3 A;  1M4J A;  1M2V A;  1P8X A;  3EG9 B;  3EGD A;  1COF A;  2L72 A;  4PKH B;  5IVU A;  1JHW A;  2LXX A;  3CI5 G;  2VAC A;  2NUT A;  3EH2 A;  5KYY A;  1PD1 A;  1NPH A;  3EG9 A;  2QTV A;  5KYU B;  5A1M A;  4KEE A;  1QPV A;  1DEJ S;  5KYN A;  1CNU A;  1M2V B;  3EGD B;  2FGH A;  5KYU A;  2MP4 A;  3FFK A;  3FG6 A;  1T2L A;  1ESV S;  2NUT B;  2KVK A;  3DA7 A;  5HVK B;  4CBU G;  1HQZ 1;  5KYY B;  1Q8G A;  1T3X A;  1VKK A;  5DD2 A;  1WFS A;  4BEX 1;  1MDU A;  1D4X G;  1NMD G;  2XF1 A;  3EH1 A;  3DAW B;  4CBW G;  3EFO A;  4PKI G;  2LJ8 A;  5FAF A;  1H1V G;  2I2Q A;  1AK6 A;  3CJC G;  1TVJ A;  3CIP G;  1KCQ A;  1SVQ A;  1SVR A;  1D0N A;  1SVY A;  3A5M S;  2LLF A;  5KYX A;  2W0I A;  3FFN A;  1PD0 A;  1RGI G;  1Q8X A;  1YVN G;  2VIL A;  2FF6 G;  2D8B A;  2NUP A;  3TU5 B;  4LIZ A;  1F7S A;  3EFO B;  2FH4 A;  1J72 A;  1PCX A;  1YAG G;  3A5O S;  4CBX G;  1CFY A;  1WM4 A;  1VFQ A; 
#chains in the Genus database with same CATH homology
 3Q2B A;  5FAE A;  5L6W C;  1UDM A;  1P8Z G;  1V6F A;  1X67 A;  1WNJ A;  3EGX A;  3A5N S;  5KYW A;  5KYX B;  4Z94 G;  3EGX B;  2NUP B;  2FH3 A;  1T3Y A;  5HVK D;  1EQY S;  4KED A;  3FG7 A;  4PKG G;  1C0G S;  3A5L S;  2FH2 A;  3L50 A;  1M2O A;  2XFA A;  2HD7 A;  4JD2 H;  1TMW A;  5KYW B;  1AHQ A;  1T44 G;  1NLV G;  2FH1 A;  1C0F S;  1NM1 G;  2VIK A;  2MV2 A;  1AK7 A;  4KEF A;  2MOT A;  3CJB G;  4S10 C;  2FF3 A;  1M4J A;  1M2V A;  1P8X A;  3EG9 B;  3EGD A;  1COF A;  2L72 A;  4PKH B;  5IVU A;  1JHW A;  2LXX A;  3CI5 G;  2VAC A;  2NUT A;  3EH2 A;  5KYY A;  1PD1 A;  1NPH A;  3EG9 A;  2QTV A;  5KYU B;  5A1M A;  4KEE A;  1QPV A;  1DEJ S;  5KYN A;  1CNU A;  1M2V B;  3EGD B;  2FGH A;  5KYU A;  2MP4 A;  3FFK A;  3FG6 A;  1T2L A;  1ESV S;  2NUT B;  2KVK A;  3DA7 A;  5HVK B;  4CBU G;  1HQZ 1;  5KYY B;  1Q8G A;  1T3X A;  1VKK A;  5DD2 A;  1WFS A;  4BEX 1;  1MDU A;  1D4X G;  1NMD G;  2XF1 A;  3EH1 A;  3DAW B;  4CBW G;  3EFO A;  4PKI G;  2LJ8 A;  5FAF A;  1H1V G;  2I2Q A;  1AK6 A;  3CJC G;  1TVJ A;  3CIP G;  1KCQ A;  1SVQ A;  1SVR A;  1D0N A;  1SVY A;  3A5M S;  2LLF A;  5KYX A;  2W0I A;  3FFN A;  1PD0 A;  1RGI G;  1Q8X A;  1YVN G;  2VIL A;  2FF6 G;  2D8B A;  2NUP A;  3TU5 B;  4LIZ A;  1F7S A;  3EFO B;  2FH4 A;  1J72 A;  1PCX A;  1YAG G;  3A5O S;  4CBX G;  1CFY A;  1WM4 A;  1VFQ A; 
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