2MV2A

Solution structure of twinstar from drosophila melanogastor
Total Genus 38
204060801001201400510152025303540
Genus TraceResidueGenus

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
38
sequence length
148
structure length
148
Chain Sequence
MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCGPGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASREAVEEKLRATDRQ

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
EMPTYTII1 (31-34)S1 (6-7)TI'1 (32-35)S3 (36-43)AH1 (9-21)TI1 (44-47)TIV1 (22-25)S2 (26-32)AH3 (101-118)AH2 (49-59)AH4 (135-144)TIV3 (60-63)S4 (65-77)S5 (80-94)TI2 (96-99)S6 (123-127)TII2 (118-121)TI3 (129-132)TI4 (130-133)TVIII3 (131-134)TVIII2 (45-48)Updating...
connected with : NaN
publication title Solution structure and dynamics of Twinstar from Drosophila melanogastor
rcsb
molecule keywords Cofilin/actin-depolymerizing factor homolog
molecule tags Actin binding protein
source organism Drosophila melanogaster
total genus 38
structure length 148
sequence length 148
ec nomenclature
pdb deposition date 2014-09-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00241 Cofilin_ADF Cofilin/tropomyosin-type actin-binding protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.20.10 Alpha Beta 3-Layer(aba) Sandwich Severin Severin 2mv2A00
4KEDA 5KYWB 1AK6A 1COFA 3EH1A 1KCQA 2NUPB 1X67A 4Z94G 5KYYA 1PD0A 2FH1A 4KEFA 2KVKA 4PKIG 3EGDA 1YVNG 1PD1A 1WM4A 1VKKA 1WFSA 1YAGG 2FGHA 1H1VG 1NLVG 1M2OA 2LJ8A 1CNUA 5HVKB 5KYNA 5KYWA 1ESVS 1T3YA 1HQZ1 1P8XA 3EG9B 1T3XA 1D4XG 5IVUA 5L6WC 1AK7A 1PCXA 1C0FS 1NPHA 5KYXA 2L72A 4PKGG 3EGXB 1RGIG 3FG7A 5HVKD 1F7SA 4CBXG 2VILA 4CBWG 3CIPG 1DEJS 5KYUB 3A5OS 4LIZA 3A5LS 2XF1A 1EQYS 4S10C 2HD7A 4CBUG 3A5NS 3CI5G 1Q8GA 3EH2A 3Q2BA 1P8ZG 3DAWB 2NUPA 2FF3A 2FH3A 4PKHB 1UDMA 4BEX1 1T44G 3EFOB 5KYUA 5DD2A 1V6FA 1WNJA 2LLFA 2FH2A 5KYYB 1TMWA 2MOTA 4JD2H 5A1MA 5FAEA 1SVRA 3EG9A 1D0NA 1VFQA 1M2VB 1TVJA 1QPVA 1M4JA 4KEEA 1J72A 3EGXA 2MV2A 1NM1G 3FFKA 3FG6A 1NMDG 1T2LA 2FH4A 2D8BA 2NUTB 3CJBG 3FFNA 5KYXB 1Q8XA 1JHWA 3CJCG 1SVYA 2FF6G 1M2VA 2QTVA 2VACA 1C0GS 2VIKA 2I2QA 2W0IA 3A5MS 2XFAA 3TU5B 3EGDB 2LXXA 1AHQA 1SVQA 3L50A 1CFYA 2NUTA 3EFOA 5FAFA 1MDUA 2MP4A
chains in the Genus database with same CATH superfamily
4KEDA 3DA7A 5KYWB 1AK6A 1COFA 3EH1A 1KCQA 2NUPB 1X67A 4Z94G 5KYYA 1PD0A 2FH1A 4KEFA 2KVKA 4PKIG 3EGDA 1YVNG 1PD1A 1WM4A 1VKKA 1WFSA 1YAGG 2FGHA 1H1VG 1NLVG 1M2OA 2LJ8A 1CNUA 5HVKB 5KYNA 5KYWA 1ESVS 1T3YA 1HQZ1 1P8XA 3EG9B 1T3XA 1D4XG 5IVUA 5L6WC 1AK7A 1PCXA 1C0FS 1NPHA 5KYXA 2L72A 4PKGG 3EGXB 1RGIG 3FG7A 5HVKD 1F7SA 4CBXG 2VILA 4CBWG 3CIPG 1DEJS 5KYUB 3A5OS 4LIZA 3A5LS 2XF1A 1EQYS 4S10C 2HD7A 4CBUG 3A5NS 3CI5G 1Q8GA 3EH2A 3Q2BA 1P8ZG 3DAWB 2NUPA 2FF3A 2FH3A 4PKHB 1UDMA 4BEX1 1T44G 3EFOB 5KYUA 5DD2A 1V6FA 1WNJA 2LLFA 2FH2A 5KYYB 1TMWA 2MOTA 4JD2H 5A1MA 5FAEA 1SVRA 3EG9A 1D0NA 1VFQA 1M2VB 1TVJA 1QPVA 1M4JA 4KEEA 1J72A 3EGXA 2MV2A 1NM1G 3FFKA 3FG6A 1NMDG 1T2LA 2FH4A 2D8BA 2NUTB 3CJBG 3FFNA 5KYXB 1Q8XA 1JHWA 3CJCG 1SVYA 2FF6G 1M2VA 2QTVA 2VACA 1C0GS 2VIKA 2I2QA 2W0IA 3A5MS 2XFAA 3TU5B 3EGDB 2LXXA 1AHQA 1SVQA 3L50A 1CFYA 2NUTA 3EFOA 5FAFA 1MDUA 2MP4A
chains in the Genus database with same CATH topology
4KEDA 3DA7A 5KYWB 1AK6A 1COFA 3EH1A 1KCQA 2NUPB 1X67A 4Z94G 5KYYA 1PD0A 2FH1A 4KEFA 2KVKA 4PKIG 3EGDA 1YVNG 1PD1A 1WM4A 1VKKA 1WFSA 1YAGG 2FGHA 1H1VG 1NLVG 1M2OA 2LJ8A 1CNUA 5HVKB 5KYNA 5KYWA 1ESVS 1T3YA 1HQZ1 1P8XA 3EG9B 1T3XA 1D4XG 5IVUA 5L6WC 1AK7A 1PCXA 1C0FS 1NPHA 5KYXA 2L72A 4PKGG 3EGXB 1RGIG 3FG7A 5HVKD 1F7SA 4CBXG 2VILA 4CBWG 3CIPG 1DEJS 5KYUB 3A5OS 4LIZA 3A5LS 2XF1A 1EQYS 4S10C 2HD7A 4CBUG 3A5NS 3CI5G 1Q8GA 3EH2A 3Q2BA 1P8ZG 3DAWB 2NUPA 2FF3A 2FH3A 4PKHB 1UDMA 4BEX1 1T44G 3EFOB 5KYUA 5DD2A 1V6FA 1WNJA 2LLFA 2FH2A 5KYYB 1TMWA 2MOTA 4JD2H 5A1MA 5FAEA 1SVRA 3EG9A 1D0NA 1VFQA 1M2VB 1TVJA 1QPVA 1M4JA 4KEEA 1J72A 3EGXA 2MV2A 1NM1G 3FFKA 3FG6A 1NMDG 1T2LA 2FH4A 2D8BA 2NUTB 3CJBG 3FFNA 5KYXB 1Q8XA 1JHWA 3CJCG 1SVYA 2FF6G 1M2VA 2QTVA 2VACA 1C0GS 2VIKA 2I2QA 2W0IA 3A5MS 2XFAA 3TU5B 3EGDB 2LXXA 1AHQA 1SVQA 3L50A 1CFYA 2NUTA 3EFOA 5FAFA 1MDUA 2MP4A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4KED A;  5KYW B;  1AK6 A;  1COF A;  3EH1 A;  1KCQ A;  2NUP B;  1X67 A;  4Z94 G;  5KYY A;  1PD0 A;  2FH1 A;  4KEF A;  2KVK A;  4PKI G;  3EGD A;  1YVN G;  1PD1 A;  1WM4 A;  1VKK A;  1WFS A;  1YAG G;  2FGH A;  1H1V G;  1NLV G;  1M2O A;  2LJ8 A;  1CNU A;  5HVK B;  5KYN A;  5KYW A;  1ESV S;  1T3Y A;  1HQZ 1;  1P8X A;  3EG9 B;  1T3X A;  1D4X G;  5IVU A;  5L6W C;  1AK7 A;  1PCX A;  1C0F S;  1NPH A;  5KYX A;  2L72 A;  4PKG G;  3EGX B;  1RGI G;  3FG7 A;  5HVK D;  1F7S A;  4CBX G;  2VIL A;  4CBW G;  3CIP G;  1DEJ S;  5KYU B;  3A5O S;  4LIZ A;  3A5L S;  2XF1 A;  1EQY S;  4S10 C;  2HD7 A;  4CBU G;  3A5N S;  3CI5 G;  1Q8G A;  3EH2 A;  3Q2B A;  1P8Z G;  3DAW B;  2NUP A;  2FF3 A;  2FH3 A;  4PKH B;  1UDM A;  4BEX 1;  1T44 G;  3EFO B;  5KYU A;  5DD2 A;  1V6F A;  1WNJ A;  2LLF A;  2FH2 A;  5KYY B;  1TMW A;  2MOT A;  4JD2 H;  5A1M A;  5FAE A;  1SVR A;  3EG9 A;  1D0N A;  1VFQ A;  1M2V B;  1TVJ A;  1QPV A;  1M4J A;  4KEE A;  1J72 A;  3EGX A;  2MV2 A;  1NM1 G;  3FFK A;  3FG6 A;  1NMD G;  1T2L A;  2FH4 A;  2D8B A;  2NUT B;  3CJB G;  3FFN A;  5KYX B;  1Q8X A;  1JHW A;  3CJC G;  1SVY A;  2FF6 G;  1M2V A;  2QTV A;  2VAC A;  1C0G S;  2VIK A;  2I2Q A;  2W0I A;  3A5M S;  2XFA A;  3TU5 B;  3EGD B;  2LXX A;  1AHQ A;  1SVQ A;  3L50 A;  1CFY A;  2NUT A;  3EFO A;  5FAF A;  1MDU A;  2MP4 A; 
#chains in the Genus database with same CATH topology
 4KED A;  3DA7 A;  5KYW B;  1AK6 A;  1COF A;  3EH1 A;  1KCQ A;  2NUP B;  1X67 A;  4Z94 G;  5KYY A;  1PD0 A;  2FH1 A;  4KEF A;  2KVK A;  4PKI G;  3EGD A;  1YVN G;  1PD1 A;  1WM4 A;  1VKK A;  1WFS A;  1YAG G;  2FGH A;  1H1V G;  1NLV G;  1M2O A;  2LJ8 A;  1CNU A;  5HVK B;  5KYN A;  5KYW A;  1ESV S;  1T3Y A;  1HQZ 1;  1P8X A;  3EG9 B;  1T3X A;  1D4X G;  5IVU A;  5L6W C;  1AK7 A;  1PCX A;  1C0F S;  1NPH A;  5KYX A;  2L72 A;  4PKG G;  3EGX B;  1RGI G;  3FG7 A;  5HVK D;  1F7S A;  4CBX G;  2VIL A;  4CBW G;  3CIP G;  1DEJ S;  5KYU B;  3A5O S;  4LIZ A;  3A5L S;  2XF1 A;  1EQY S;  4S10 C;  2HD7 A;  4CBU G;  3A5N S;  3CI5 G;  1Q8G A;  3EH2 A;  3Q2B A;  1P8Z G;  3DAW B;  2NUP A;  2FF3 A;  2FH3 A;  4PKH B;  1UDM A;  4BEX 1;  1T44 G;  3EFO B;  5KYU A;  5DD2 A;  1V6F A;  1WNJ A;  2LLF A;  2FH2 A;  5KYY B;  1TMW A;  2MOT A;  4JD2 H;  5A1M A;  5FAE A;  1SVR A;  3EG9 A;  1D0N A;  1VFQ A;  1M2V B;  1TVJ A;  1QPV A;  1M4J A;  4KEE A;  1J72 A;  3EGX A;  2MV2 A;  1NM1 G;  3FFK A;  3FG6 A;  1NMD G;  1T2L A;  2FH4 A;  2D8B A;  2NUT B;  3CJB G;  3FFN A;  5KYX B;  1Q8X A;  1JHW A;  3CJC G;  1SVY A;  2FF6 G;  1M2V A;  2QTV A;  2VAC A;  1C0G S;  2VIK A;  2I2Q A;  2W0I A;  3A5M S;  2XFA A;  3TU5 B;  3EGD B;  2LXX A;  1AHQ A;  1SVQ A;  3L50 A;  1CFY A;  2NUT A;  3EFO A;  5FAF A;  1MDU A;  2MP4 A; 
#chains in the Genus database with same CATH homology
 4KED A;  3DA7 A;  5KYW B;  1AK6 A;  1COF A;  3EH1 A;  1KCQ A;  2NUP B;  1X67 A;  4Z94 G;  5KYY A;  1PD0 A;  2FH1 A;  4KEF A;  2KVK A;  4PKI G;  3EGD A;  1YVN G;  1PD1 A;  1WM4 A;  1VKK A;  1WFS A;  1YAG G;  2FGH A;  1H1V G;  1NLV G;  1M2O A;  2LJ8 A;  1CNU A;  5HVK B;  5KYN A;  5KYW A;  1ESV S;  1T3Y A;  1HQZ 1;  1P8X A;  3EG9 B;  1T3X A;  1D4X G;  5IVU A;  5L6W C;  1AK7 A;  1PCX A;  1C0F S;  1NPH A;  5KYX A;  2L72 A;  4PKG G;  3EGX B;  1RGI G;  3FG7 A;  5HVK D;  1F7S A;  4CBX G;  2VIL A;  4CBW G;  3CIP G;  1DEJ S;  5KYU B;  3A5O S;  4LIZ A;  3A5L S;  2XF1 A;  1EQY S;  4S10 C;  2HD7 A;  4CBU G;  3A5N S;  3CI5 G;  1Q8G A;  3EH2 A;  3Q2B A;  1P8Z G;  3DAW B;  2NUP A;  2FF3 A;  2FH3 A;  4PKH B;  1UDM A;  4BEX 1;  1T44 G;  3EFO B;  5KYU A;  5DD2 A;  1V6F A;  1WNJ A;  2LLF A;  2FH2 A;  5KYY B;  1TMW A;  2MOT A;  4JD2 H;  5A1M A;  5FAE A;  1SVR A;  3EG9 A;  1D0N A;  1VFQ A;  1M2V B;  1TVJ A;  1QPV A;  1M4J A;  4KEE A;  1J72 A;  3EGX A;  2MV2 A;  1NM1 G;  3FFK A;  3FG6 A;  1NMD G;  1T2L A;  2FH4 A;  2D8B A;  2NUT B;  3CJB G;  3FFN A;  5KYX B;  1Q8X A;  1JHW A;  3CJC G;  1SVY A;  2FF6 G;  1M2V A;  2QTV A;  2VAC A;  1C0G S;  2VIK A;  2I2Q A;  2W0I A;  3A5M S;  2XFA A;  3TU5 B;  3EGD B;  2LXX A;  1AHQ A;  1SVQ A;  3L50 A;  1CFY A;  2NUT A;  3EFO A;  5FAF A;  1MDU A;  2MP4 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
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