2GY7A

Angiopoietin-2/tie2 complex crystal structure
Total Genus 46
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
46
sequence length
216
structure length
216
Chain Sequence
EFRDCAEVFKSGHTTNGIYTLTFPNSTEEIKAYCDMEAGGGGWTIIQRREDGSVDFQRTWKEYKVGFGNPSGEYWLGNEFVSQLTNQQRYVLKIHLKDWEGNEAYSLYEHFYLSSEELNYRIHLKGLTGTAGKISSISQPGNDFSTKDGDNDKCICKCSQMLTGGWWFDACGPSNLNGMYYPQRQNTNKFNGIKWYYWKGSGYSLKATTMMIRPAD
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Signaling protein
source organism Homo sapiens
publication title Crystal structures of the Tie2 receptor ectodomain and the angiopoietin-2-Tie2 complex.
pubmed doi rcsb
molecule keywords Angiopoietin-2
total genus 46
structure length 216
sequence length 216
ec nomenclature
pdb deposition date 2006-05-09
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.90.215.10 Alpha Beta Alpha-Beta Complex Gamma Fibrinogen; Chain A, domain 1 Gamma Fibrinogen, chain A, domain 1 2gy7A01
4.10.530.10 Few Secondary Structures Irregular Gamma-fibrinogen Carboxyl Terminal Fragment; domain 2 Gamma-fibrinogen Carboxyl Terminal Fragment, domain 2 2gy7A02
1LWUC 2XNXC 1LT9B 1LTJC 2HLOB 1FZCB 2JHLF 2J60A 2JHHC 1JC9A 1N86B 2J64A 1N73C 2J3FA 2GY7A 1FZBB 2OYIB 1M1JB 2HODB 2J61A 1LT9C 4R9JA 1FZGC 2HLOC 1FZCC 3H32B 2H43C 2J3OA 1FIDA 2J2PA 2Z4EB 1RE4B 1RF1B 1N86C 3GHGC 1FZBC 3E1IB 2WNPF 2OYIC 3BVHB 1M1JC 4R9TA 1FZAB 2J3GA 2HPCB 1FZEB 2HODC 3HUSB 2OYHB 3FIBA 3H32C 1Z3UA 2FIBA 2J0HA 4EPUA 1RE4C 1RF1C 4NYTA 2J3UA 4M7HA 2D39A 3E1IC 2JHMF 3BVHC 2FFDB 2J0GA 1FZDA 1FICA 1FZAC 1RF0B 2J5ZA 2HPCC 1RE3B 1FZEC 1Z3SA 3HUSC 1FZFB 2JHKF 1FIBA 2OYHC 1FZGB 2Q9IB 1LWUB 2XNXB 2H43B 1LTJB 2Z4EC 2FFDC 2J1GA 4JYOX 1RF0C 4M7FA 1RE3C 1FZFC 2J3FD 2J61B 4ZFGA 1N73B 4JZCA 2J0YA 2JHIF 2Q9IC
chains in the Genus database with same CATH superfamily
1LWUC 2XNXC 1LT9B 1LTJC 2HLOB 1FZCB 2JHLF 2J60A 2JHHC 1JC9A 1N86B 3GHGB 2J64A 1N73C 2J3FA 2GY7A 1FZBB 2OYIB 1M1JB 2HODB 2J61A 1LT9C 4R9JA 1FZGC 2HLOC 1FZCC 3H32B 2H43C 2J3OA 1FIDA 2J2PA 2Z4EB 1RE4B 1RF1B 1N86C 3GHGC 1FZBC 3E1IB 2WNPF 2OYIC 3BVHB 1M1JC 4R9TA 1FZAB 2J3GA 2HPCB 1FZEB 2HODC 3HUSB 2OYHB 3FIBA 3H32C 1Z3UA 2FIBA 2J0HA 4EPUA 1RE4C 1RF1C 4NYTA 2J3UA 4M7HA 2D39A 3E1IC 2JHMF 3BVHC 2FFDB 2J0GA 1FZDA 1FICA 1FZAC 1RF0B 2J5ZA 2HPCC 1RE3B 1FZEC 1Z3SA 3HUSC 1FZFB 2JHKF 1FIBA 2OYHC 1FZGB 2Q9IB 1LWUB 2XNXB 2H43B 1LTJB 2Z4EC 2FFDC 2J1GA 4JYOX 1RF0C 4M7FA 1RE3C 1FZFC 2J3FD 2J61B 4ZFGA 1N73B 4JZCA 2J0YA 2JHIF 2Q9IC
chains in the Genus database with same CATH topology
1LWUC 2XNXC 1LT9B 1LTJC 2HLOB 1FZCB 2JHLF 2J60A 2JHHC 1JC9A 1N86B 2J64A 1N73C 2J3FA 2GY7A 1FZBB 2OYIB 1M1JB 2HODB 2J61A 1LT9C 4R9JA 1FZGC 2HLOC 1FZCC 3H32B 2H43C 2J3OA 1FIDA 2J2PA 2Z4EB 1RE4B 1RF1B 1N86C 3GHGC 1FZBC 3E1IB 2WNPF 2OYIC 3BVHB 1M1JC 4R9TA 1FZAB 2J3GA 2HPCB 1FZEB 2HODC 3HUSB 2OYHB 3FIBA 3H32C 1Z3UA 2FIBA 2J0HA 4EPUA 1RE4C 1RF1C 4NYTA 2J3UA 4M7HA 2D39A 3E1IC 2JHMF 3BVHC 2FFDB 2J0GA 1FZDA 1FICA 1FZAC 1RF0B 2J5ZA 2HPCC 1RE3B 1FZEC 1Z3SA 3HUSC 1FZFB 2JHKF 1FIBA 2OYHC 1FZGB 2Q9IB 1LWUB 2XNXB 2H43B 1LTJB 2Z4EC 2FFDC 2J1GA 4JYOX 1RF0C 4M7FA 1RE3C 1FZFC 2J3FD 2J61B 4ZFGA 1N73B 4JZCA 2J0YA 2JHIF 2Q9IC
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1LWU C;  2XNX C;  1LT9 B;  1LTJ C;  2HLO B;  1FZC B;  2JHL F;  2J60 A;  2JHH C;  1JC9 A;  1N86 B;  2J64 A;  1N73 C;  2J3F A;  2GY7 A;  1FZB B;  2OYI B;  1M1J B;  2HOD B;  2J61 A;  1LT9 C;  4R9J A;  1FZG C;  2HLO C;  1FZC C;  3H32 B;  2H43 C;  2J3O A;  1FID A;  2J2P A;  2Z4E B;  1RE4 B;  1RF1 B;  1N86 C;  3GHG C;  1FZB C;  3E1I B;  2WNP F;  2OYI C;  3BVH B;  1M1J C;  4R9T A;  1FZA B;  2J3G A;  2HPC B;  1FZE B;  2HOD C;  3HUS B;  2OYH B;  3FIB A;  3H32 C;  1Z3U A;  2FIB A;  2J0H A;  4EPU A;  1RE4 C;  1RF1 C;  4NYT A;  2J3U A;  4M7H A;  2D39 A;  3E1I C;  2JHM F;  3BVH C;  2FFD B;  2J0G A;  1FZD A;  1FIC A;  1FZA C;  1RF0 B;  2J5Z A;  2HPC C;  1RE3 B;  1FZE C;  1Z3S A;  3HUS C;  1FZF B;  2JHK F;  1FIB A;  2OYH C;  1FZG B;  2Q9I B;  1LWU B;  2XNX B;  2H43 B;  1LTJ B;  2Z4E C;  2FFD C;  2J1G A;  4JYO X;  1RF0 C;  4M7F A;  1RE3 C;  1FZF C;  2J3F D;  2J61 B;  4ZFG A;  1N73 B;  4JZC A;  2J0Y A;  2JHI F;  2Q9I C; 
#chains in the Genus database with same CATH topology
 1LWU C;  2XNX C;  1LT9 B;  1LTJ C;  2HLO B;  1FZC B;  2JHL F;  2J60 A;  2JHH C;  1JC9 A;  1N86 B;  3GHG B;  2J64 A;  1N73 C;  2J3F A;  2GY7 A;  1FZB B;  2OYI B;  1M1J B;  2HOD B;  2J61 A;  1LT9 C;  4R9J A;  1FZG C;  2HLO C;  1FZC C;  3H32 B;  2H43 C;  2J3O A;  1FID A;  2J2P A;  2Z4E B;  1RE4 B;  1RF1 B;  1N86 C;  3GHG C;  1FZB C;  3E1I B;  2WNP F;  2OYI C;  3BVH B;  1M1J C;  4R9T A;  1FZA B;  2J3G A;  2HPC B;  1FZE B;  2HOD C;  3HUS B;  2OYH B;  3FIB A;  3H32 C;  1Z3U A;  2FIB A;  2J0H A;  4EPU A;  1RE4 C;  1RF1 C;  4NYT A;  2J3U A;  4M7H A;  2D39 A;  3E1I C;  2JHM F;  3BVH C;  2FFD B;  2J0G A;  1FZD A;  1FIC A;  1FZA C;  1RF0 B;  2J5Z A;  2HPC C;  1RE3 B;  1FZE C;  1Z3S A;  3HUS C;  1FZF B;  2JHK F;  1FIB A;  2OYH C;  1FZG B;  2Q9I B;  1LWU B;  2XNX B;  2H43 B;  1LTJ B;  2Z4E C;  2FFD C;  2J1G A;  4JYO X;  1RF0 C;  4M7F A;  1RE3 C;  1FZF C;  2J3F D;  2J61 B;  4ZFG A;  1N73 B;  4JZC A;  2J0Y A;  2JHI F;  2Q9I C; 
#chains in the Genus database with same CATH homology
 1LWU C;  2XNX C;  1LT9 B;  1LTJ C;  2HLO B;  1FZC B;  2JHL F;  2J60 A;  2JHH C;  1JC9 A;  1N86 B;  2J64 A;  1N73 C;  2J3F A;  2GY7 A;  1FZB B;  2OYI B;  1M1J B;  2HOD B;  2J61 A;  1LT9 C;  4R9J A;  1FZG C;  2HLO C;  1FZC C;  3H32 B;  2H43 C;  2J3O A;  1FID A;  2J2P A;  2Z4E B;  1RE4 B;  1RF1 B;  1N86 C;  3GHG C;  1FZB C;  3E1I B;  2WNP F;  2OYI C;  3BVH B;  1M1J C;  4R9T A;  1FZA B;  2J3G A;  2HPC B;  1FZE B;  2HOD C;  3HUS B;  2OYH B;  3FIB A;  3H32 C;  1Z3U A;  2FIB A;  2J0H A;  4EPU A;  1RE4 C;  1RF1 C;  4NYT A;  2J3U A;  4M7H A;  2D39 A;  3E1I C;  2JHM F;  3BVH C;  2FFD B;  2J0G A;  1FZD A;  1FIC A;  1FZA C;  1RF0 B;  2J5Z A;  2HPC C;  1RE3 B;  1FZE C;  1Z3S A;  3HUS C;  1FZF B;  2JHK F;  1FIB A;  2OYH C;  1FZG B;  2Q9I B;  1LWU B;  2XNX B;  2H43 B;  1LTJ B;  2Z4E C;  2FFD C;  2J1G A;  4JYO X;  1RF0 C;  4M7F A;  1RE3 C;  1FZF C;  2J3F D;  2J61 B;  4ZFG A;  1N73 B;  4JZC A;  2J0Y A;  2JHI F;  2Q9I C; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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#similar chains in the pdb database (?% sequence similarity)
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