2CQUA

Solution structure of rsgi ruh-045, a human acyl-coa binding protein
Total Genus 19
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
19
sequence length
116
structure length
116
Chain Sequence
GSSGSSGMNRTAMRASQKDFENSMNQVKLLKKDPGNEVKLKLYALYKQATEGPCNMPKPGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLESSSQVEPGTDSGPSSG
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule tags Isomerase
molecule keywords peroxisomal D3,D2-enoyl-CoA isomerase
publication title Solution Structure of RSGI RUH-045, a Human Acyl-CoA Binding Protein
rcsb
source organism Homo sapiens
total genus 19
structure length 116
sequence length 116
ec nomenclature ec 5.3.3.8: Delta(3)-Delta(2)-enoyl-CoA isomerase.
pdb deposition date 2005-05-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00887 ACBP Acyl CoA binding protein
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
1.20.80.10 Mainly Alpha Up-down Bundle Acyl-CoA Binding Protein Acyl-CoA Binding Protein 2cquA00
4CYEA 2CB8A 4ZRJA 4EKUA 3AU5A 2HRJA 2ZPYA 3QIJA 4NY0A 1E5WA 3BINA 1GC7A 3EPYA 1GG3A 1Y19B 1NI2A 2J0KA 4ZRIA 3ZDTA 2I1JA 2D11A 3PVLA 5IJMA 1ST7A 1NTIA 1ISNA 2CQUA 2HE7A 2WH5A 3X23A 1MIXA 4ZRKA 4DXAB 2AEHA 1H4RA 2LBBA 1HB6A 1GC6A 1HBKA 3FP5A 2FDQA 2COPA 2D2QA 1HB8A 2J0JA 2AL6A 1EF1A 1J19A 1MIZB 1SGHA 3AU4A 3G9WA 2RQ1A 4HDQA 3U8ZA 2FJ9A 3WA0A 2EMTA 1NVLA 4P7IA 1MK7B 2EMSA 2I1KA 4F7GA 2D10A 2J0MA 3PZDA 2ABDA 1ACAA 2YVCA 4YL8A 3FLVA 1MK9B 3IVFA 3U7DA 4HDOA
chains in the Genus database with same CATH superfamily
4EKUA 2ZPYA 4NY0A 3E9LA 1GC7A 3E66A 1VBHA 4JK9A 2I1JA 1ST7A 4DXAB 2AEHA 2LBBA 2COPA 2J0JA 4JKEA 1KBLA 1GGOA 4P7IA 2D10A 2J0MA 3PZDA 2YVCA 3SBGA 4YL8A 3ENBA 4GXBA 3U7DA 4JKAA 1JDEA 4ILGB 4ZRJA 4JKHA 3BINA 1Y19B 1NI2A 4JKGB 1VBGA 4ZRIA 3ZDTA 2HE7A 1H4RA 1HB6A 1HB8A 1EF1A 1SGHA 4HDQA 2FJ9A 1KC7A 2ABDA 4JKGA 1MK9B 5JVLA 3E9PA 4CYEA 2CB8A 2HRJA 4ILHA 1E5WA 3EPYA 2J0KA 5IJMA 1NTIA 1ISNA 2CQUA 2WH5A 4ZRKA 1HBKA 2AL6A 3E9OA 3G9WA 2RQ1A 3U8ZA 1NVLA 1MK7B 4JKBA 3FLVA 4HDOA 3AU5A 3QIJA 4JK7A 1GG3A 2DIKA 4JKCA 2D11A 3PVLA 4JKFA 3X23A 1MIXA 2R82A 3SBTA 4JKDA 1GC6A 3FP5A 2FDQA 1DIKA 2D2QA 1J19A 1MIZB 3AU4A 3WA0A 4ILJA 2EMTA 4TKNA 2EMSA 4F7GA 2I1KA 4JK8A 1ACAA 3IVFA 2X0SA
chains in the Genus database with same CATH topology
4EKUA 2ZPYA 4NY0A 3E9LA 1GC7A 3E66A 1VBHA 4JK9A 2I1JA 1ST7A 4DXAB 2AEHA 2LBBA 2COPA 2J0JA 4JKEA 1KBLA 1GGOA 4P7IA 2D10A 2J0MA 3PZDA 2YVCA 3SBGA 4YL8A 3ENBA 4GXBA 3U7DA 4JKAA 1JDEA 4ILGB 4ZRJA 4JKHA 3BINA 1Y19B 1NI2A 4JKGB 1VBGA 4ZRIA 3ZDTA 2HE7A 1H4RA 1HB6A 1HB8A 1EF1A 1SGHA 4HDQA 2FJ9A 1KC7A 2ABDA 4JKGA 1MK9B 5JVLA 3E9PA 4CYEA 2CB8A 2HRJA 4ILHA 1E5WA 3EPYA 2J0KA 5IJMA 1NTIA 1ISNA 2CQUA 2WH5A 4ZRKA 1HBKA 2AL6A 3E9OA 3G9WA 2RQ1A 3U8ZA 1NVLA 1MK7B 4JKBA 3FLVA 4HDOA 3AU5A 3QIJA 4JK7A 1GG3A 2DIKA 4JKCA 2D11A 3PVLA 4JKFA 3X23A 1MIXA 2R82A 3SBTA 4JKDA 1GC6A 3FP5A 2FDQA 1DIKA 2D2QA 1J19A 1MIZB 3AU4A 3WA0A 4ILJA 2EMTA 4TKNA 2EMSA 4F7GA 2I1KA 4JK8A 1ACAA 3IVFA 2X0SA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4CYE A;  2CB8 A;  4ZRJ A;  4EKU A;  3AU5 A;  2HRJ A;  2ZPY A;  3QIJ A;  4NY0 A;  1E5W A;  3BIN A;  1GC7 A;  3EPY A;  1GG3 A;  1Y19 B;  1NI2 A;  2J0K A;  4ZRI A;  3ZDT A;  2I1J A;  2D11 A;  3PVL A;  5IJM A;  1ST7 A;  1NTI A;  1ISN A;  2CQU A;  2HE7 A;  2WH5 A;  3X23 A;  1MIX A;  4ZRK A;  4DXA B;  2AEH A;  1H4R A;  2LBB A;  1HB6 A;  1GC6 A;  1HBK A;  3FP5 A;  2FDQ A;  2COP A;  2D2Q A;  1HB8 A;  2J0J A;  2AL6 A;  1EF1 A;  1J19 A;  1MIZ B;  1SGH A;  3AU4 A;  3G9W A;  2RQ1 A;  4HDQ A;  3U8Z A;  2FJ9 A;  3WA0 A;  2EMT A;  1NVL A;  4P7I A;  1MK7 B;  2EMS A;  2I1K A;  4F7G A;  2D10 A;  2J0M A;  3PZD A;  2ABD A;  1ACA A;  2YVC A;  4YL8 A;  3FLV A;  1MK9 B;  3IVF A;  3U7D A;  4HDO A; 
#chains in the Genus database with same CATH topology
 4EKU A;  2ZPY A;  4NY0 A;  3E9L A;  1GC7 A;  3E66 A;  1VBH A;  4JK9 A;  2I1J A;  1ST7 A;  4DXA B;  2AEH A;  2LBB A;  2COP A;  2J0J A;  4JKE A;  1KBL A;  1GGO A;  4P7I A;  2D10 A;  2J0M A;  3PZD A;  2YVC A;  3SBG A;  4YL8 A;  3ENB A;  4GXB A;  3U7D A;  4JKA A;  1JDE A;  4ILG B;  4ZRJ A;  4JKH A;  3BIN A;  1Y19 B;  1NI2 A;  4JKG B;  1VBG A;  4ZRI A;  3ZDT A;  2HE7 A;  1H4R A;  1HB6 A;  1HB8 A;  1EF1 A;  1SGH A;  4HDQ A;  2FJ9 A;  1KC7 A;  2ABD A;  4JKG A;  1MK9 B;  5JVL A;  3E9P A;  4CYE A;  2CB8 A;  2HRJ A;  4ILH A;  1E5W A;  3EPY A;  2J0K A;  5IJM A;  1NTI A;  1ISN A;  2CQU A;  2WH5 A;  4ZRK A;  1HBK A;  2AL6 A;  3E9O A;  3G9W A;  2RQ1 A;  3U8Z A;  1NVL A;  1MK7 B;  4JKB A;  3FLV A;  4HDO A;  3AU5 A;  3QIJ A;  4JK7 A;  1GG3 A;  2DIK A;  4JKC A;  2D11 A;  3PVL A;  4JKF A;  3X23 A;  1MIX A;  2R82 A;  3SBT A;  4JKD A;  1GC6 A;  3FP5 A;  2FDQ A;  1DIK A;  2D2Q A;  1J19 A;  1MIZ B;  3AU4 A;  3WA0 A;  4ILJ A;  2EMT A;  4TKN A;  2EMS A;  4F7G A;  2I1K A;  4JK8 A;  1ACA A;  3IVF A;  2X0S A; 
#chains in the Genus database with same CATH homology
 4EKU A;  2ZPY A;  4NY0 A;  3E9L A;  1GC7 A;  3E66 A;  1VBH A;  4JK9 A;  2I1J A;  1ST7 A;  4DXA B;  2AEH A;  2LBB A;  2COP A;  2J0J A;  4JKE A;  1KBL A;  1GGO A;  4P7I A;  2D10 A;  2J0M A;  3PZD A;  2YVC A;  3SBG A;  4YL8 A;  3ENB A;  4GXB A;  3U7D A;  4JKA A;  1JDE A;  4ILG B;  4ZRJ A;  4JKH A;  3BIN A;  1Y19 B;  1NI2 A;  4JKG B;  1VBG A;  4ZRI A;  3ZDT A;  2HE7 A;  1H4R A;  1HB6 A;  1HB8 A;  1EF1 A;  1SGH A;  4HDQ A;  2FJ9 A;  1KC7 A;  2ABD A;  4JKG A;  1MK9 B;  5JVL A;  3E9P A;  4CYE A;  2CB8 A;  2HRJ A;  4ILH A;  1E5W A;  3EPY A;  2J0K A;  5IJM A;  1NTI A;  1ISN A;  2CQU A;  2WH5 A;  4ZRK A;  1HBK A;  2AL6 A;  3E9O A;  3G9W A;  2RQ1 A;  3U8Z A;  1NVL A;  1MK7 B;  4JKB A;  3FLV A;  4HDO A;  3AU5 A;  3QIJ A;  4JK7 A;  1GG3 A;  2DIK A;  4JKC A;  2D11 A;  3PVL A;  4JKF A;  3X23 A;  1MIX A;  2R82 A;  3SBT A;  4JKD A;  1GC6 A;  3FP5 A;  2FDQ A;  1DIK A;  2D2Q A;  1J19 A;  1MIZ B;  3AU4 A;  3WA0 A;  4ILJ A;  2EMT A;  4TKN A;  2EMS A;  4F7G A;  2I1K A;  4JK8 A;  1ACA A;  3IVF A;  2X0S A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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#similar chains, but unknotted
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