1Q0BA

Crystal structure of the motor protein ksp in complex with adp and monastrol
Total Genus 110
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
110
sequence length
347
structure length
331
Chain Sequence
GKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNK
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Kinesin-like protein KIF11
publication title Inhibition of a mitotic motor protein: where, how, and conformational consequences
pubmed doi rcsb
source organism Homo sapiens
molecule tags Cell cycle
total genus 110
structure length 331
sequence length 347
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-07-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00225 Kinesin Kinesin motor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.850.10 Alpha Beta 3-Layer(aba) Sandwich Kinesin Kinesin motor domain 1q0bA00
2Y65A 2ZFJA 1VFWA 1V8JA 3K5EA 3CJOA 1T5CA 1VFVA 1VFXA 1D1BA 1KK7A 4PFPA 5LT0A 2VVGA 4LNUK 2Q2ZA 2NCDA 4HNAK 1VFZA 1F9VA 4PJNA 3ZFCA 3GBJA 2X7CA 4ETPA 1F9WA 4A51A 4BXNA 3KENA 4AS7A 4PFOA 1F9TA 5LT2A 3U06A 1X88A 4GKRA 3B6UA 2FKYA 4ANJA 2ZFKA 1I6IA 1FMVA 2FMEA 1BR4A 4H1GA 1N6MA 2Q2YA 1BR1A 3L9HA 2Y5WA 2X7DA 4A50A 1GOJA 1FMWA 3WPNA 2KINA 1MMAA 1SDMA 4A1ZA 2ZFIA 1I5SA 1YRSA 4Y05A 3BFNA 4A5YA 2XAEA 1MMDA 1II6A 3H4SA 4FRZA 2G1QA 4BBGA 2ZFMA 1Q0BA 2GM1A 3K3BA 2VASA 4DBRA 4PK4A 2X7EA 3NWNA 1RY6A 3PXNA 1MMNA 3COBA 5HLEA 4ZCAA 4E7SA 1BR2A 3L1CA 3KARA 2X2RA 2V26A 4E7ZA 2HEHA 1MNEA 3DCBA 3X2TA 2ZFLA 1G8XA 1D0ZA 5GSZA 1F9UA 3HQDA 2VB6A 3DC4A 1V8KA 5LT1A 2X51A 2PG2A 5LT4A 4A14A 1D0YA 3WRDA 2FL6A 1D1AA 1VOMA 3CNZA 3LREA 2IEHA 2OWMA 3T0QA 2MYSA 2WOGA 4PJJA 3ZCWA 4A28A 5LT3A 1MMGA 2UYIA 4ZHIA 1CZ7A 1LKXA 4AP0A 4B7BA 3KINA 1MKJA 2UYMA 2FL2A 3ZFDA 4BN2A 4PJMA 4PJLA 1LVKA 3B6VA 1D1CA 1D0XA 4UBFA 4DBQA 1BG2A 2GRYA 2XT3A
chains in the Genus database with same CATH superfamily
2Y65A 2ZFJA 1VFWA 1V8JA 3K5EA 3CJOA 1T5CA 1VFVA 1VFXA 1D1BA 1KK7A 4PFPA 5LT0A 2VVGA 4LNUK 2Q2ZA 2NCDA 4HNAK 1VFZA 1F9VA 4PJNA 3ZFCA 3GBJA 2X7CA 4ETPA 1F9WA 4A51A 4BXNA 3KENA 4AS7A 4PFOA 1F9TA 5LT2A 3U06A 1X88A 4GKRA 3B6UA 2FKYA 4ANJA 2ZFKA 1I6IA 1FMVA 2FMEA 1BR4A 4H1GA 1N6MA 2Q2YA 1BR1A 3L9HA 2Y5WA 2X7DA 4A50A 1GOJA 1FMWA 3WPNA 2KINA 1MMAA 1SDMA 4A1ZA 2ZFIA 1I5SA 1YRSA 4Y05A 3BFNA 4A5YA 4GKPA 2XAEA 1MMDA 1II6A 3H4SA 4FRZA 2G1QA 4BBGA 2ZFMA 1Q0BA 2GM1A 3K3BA 2VASA 4DBRA 4PK4A 2X7EA 3NWNA 1RY6A 3PXNA 1MMNA 3COBA 5HLEA 4ZCAA 4E7SA 1BR2A 3L1CA 3KARA 2X2RA 2V26A 4E7ZA 2HEHA 1MNEA 3DCBA 3X2TA 2ZFLA 1G8XA 1D0ZA 5GSZA 1F9UA 3HQDA 2VB6A 3DC4A 4ETPB 1V8KA 5LT1A 2X51A 2PG2A 5LT4A 4A14A 1D0YA 3WRDA 2FL6A 1D1AA 1VOMA 3CNZA 3LREA 2IEHA 2OWMA 3T0QA 2MYSA 2WOGA 4PJJA 3ZCWA 4A28A 5LT3A 1MMGA 2UYIA 4ZHIA 1CZ7A 2O0AA 1LKXA 4GKQA 4AP0A 4B7BA 3KINA 1MKJA 2UYMA 2FL2A 3ZFDA 4BN2A 4PJMA 4PJLA 1LVKA 3B6VA 1D1CA 1D0XA 4UBFA 4DBQA 1BG2A 2GRYA 2XT3A
chains in the Genus database with same CATH topology
2Y65A 2ZFJA 1VFWA 1V8JA 3K5EA 3CJOA 1T5CA 1VFVA 1VFXA 1D1BA 1KK7A 4PFPA 5LT0A 2VVGA 4LNUK 2Q2ZA 2NCDA 4HNAK 1VFZA 1F9VA 4PJNA 3ZFCA 3GBJA 2X7CA 4ETPA 1F9WA 4A51A 4BXNA 3KENA 4AS7A 4PFOA 1F9TA 5LT2A 3U06A 1X88A 4GKRA 3B6UA 2FKYA 4ANJA 2ZFKA 1I6IA 1FMVA 2FMEA 1BR4A 4H1GA 1N6MA 2Q2YA 1BR1A 3L9HA 2Y5WA 2X7DA 4A50A 1GOJA 1FMWA 3WPNA 2KINA 1MMAA 1SDMA 4A1ZA 2ZFIA 1I5SA 1YRSA 4Y05A 3BFNA 4A5YA 2XAEA 1MMDA 1II6A 3H4SA 4FRZA 2G1QA 4BBGA 2ZFMA 1Q0BA 2GM1A 3K3BA 2VASA 4DBRA 4PK4A 2X7EA 3NWNA 1RY6A 3PXNA 1MMNA 3COBA 5HLEA 4ZCAA 4E7SA 1BR2A 3L1CA 3KARA 2X2RA 2V26A 4E7ZA 2HEHA 1MNEA 3DCBA 3X2TA 2ZFLA 1G8XA 1D0ZA 5GSZA 1F9UA 3HQDA 2VB6A 3DC4A 1V8KA 5LT1A 2X51A 2PG2A 5LT4A 4A14A 1D0YA 3WRDA 2FL6A 1D1AA 1VOMA 3CNZA 3LREA 2IEHA 2OWMA 3T0QA 2MYSA 2WOGA 4PJJA 3ZCWA 4A28A 5LT3A 1MMGA 2UYIA 4ZHIA 1CZ7A 1LKXA 4AP0A 4B7BA 3KINA 1MKJA 2UYMA 2FL2A 3ZFDA 4BN2A 4PJMA 4PJLA 1LVKA 3B6VA 1D1CA 1D0XA 4UBFA 4DBQA 1BG2A 2GRYA 2XT3A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 2Y65 A;  2ZFJ A;  1VFW A;  1V8J A;  3K5E A;  3CJO A;  1T5C A;  1VFV A;  1VFX A;  1D1B A;  1KK7 A;  4PFP A;  5LT0 A;  2VVG A;  4LNU K;  2Q2Z A;  2NCD A;  4HNA K;  1VFZ A;  1F9V A;  4PJN A;  3ZFC A;  3GBJ A;  2X7C A;  4ETP A;  1F9W A;  4A51 A;  4BXN A;  3KEN A;  4AS7 A;  4PFO A;  1F9T A;  5LT2 A;  3U06 A;  1X88 A;  4GKR A;  3B6U A;  2FKY A;  4ANJ A;  2ZFK A;  1I6I A;  1FMV A;  2FME A;  1BR4 A;  4H1G A;  1N6M A;  2Q2Y A;  1BR1 A;  3L9H A;  2Y5W A;  2X7D A;  4A50 A;  1GOJ A;  1FMW A;  3WPN A;  2KIN A;  1MMA A;  1SDM A;  4A1Z A;  2ZFI A;  1I5S A;  1YRS A;  4Y05 A;  3BFN A;  4A5Y A;  2XAE A;  1MMD A;  1II6 A;  3H4S A;  4FRZ A;  2G1Q A;  4BBG A;  2ZFM A;  1Q0B A;  2GM1 A;  3K3B A;  2VAS A;  4DBR A;  4PK4 A;  2X7E A;  3NWN A;  1RY6 A;  3PXN A;  1MMN A;  3COB A;  5HLE A;  4ZCA A;  4E7S A;  1BR2 A;  3L1C A;  3KAR A;  2X2R A;  2V26 A;  4E7Z A;  2HEH A;  1MNE A;  3DCB A;  3X2T A;  2ZFL A;  1G8X A;  1D0Z A;  5GSZ A;  1F9U A;  3HQD A;  2VB6 A;  3DC4 A;  1V8K A;  5LT1 A;  2X51 A;  2PG2 A;  5LT4 A;  4A14 A;  1D0Y A;  3WRD A;  2FL6 A;  1D1A A;  1VOM A;  3CNZ A;  3LRE A;  2IEH A;  2OWM A;  3T0Q A;  2MYS A;  2WOG A;  4PJJ A;  3ZCW A;  4A28 A;  5LT3 A;  1MMG A;  2UYI A;  4ZHI A;  1CZ7 A;  1LKX A;  4AP0 A;  4B7B A;  3KIN A;  1MKJ A;  2UYM A;  2FL2 A;  3ZFD A;  4BN2 A;  4PJM A;  4PJL A;  1LVK A;  3B6V A;  1D1C A;  1D0X A;  4UBF A;  4DBQ A;  1BG2 A;  2GRY A;  2XT3 A; 
#chains in the Genus database with same CATH topology
 2Y65 A;  2ZFJ A;  1VFW A;  1V8J A;  3K5E A;  3CJO A;  1T5C A;  1VFV A;  1VFX A;  1D1B A;  1KK7 A;  4PFP A;  5LT0 A;  2VVG A;  4LNU K;  2Q2Z A;  2NCD A;  4HNA K;  1VFZ A;  1F9V A;  4PJN A;  3ZFC A;  3GBJ A;  2X7C A;  4ETP A;  1F9W A;  4A51 A;  4BXN A;  3KEN A;  4AS7 A;  4PFO A;  1F9T A;  5LT2 A;  3U06 A;  1X88 A;  4GKR A;  3B6U A;  2FKY A;  4ANJ A;  2ZFK A;  1I6I A;  1FMV A;  2FME A;  1BR4 A;  4H1G A;  1N6M A;  2Q2Y A;  1BR1 A;  3L9H A;  2Y5W A;  2X7D A;  4A50 A;  1GOJ A;  1FMW A;  3WPN A;  2KIN A;  1MMA A;  1SDM A;  4A1Z A;  2ZFI A;  1I5S A;  1YRS A;  4Y05 A;  3BFN A;  4A5Y A;  4GKP A;  2XAE A;  1MMD A;  1II6 A;  3H4S A;  4FRZ A;  2G1Q A;  4BBG A;  2ZFM A;  1Q0B A;  2GM1 A;  3K3B A;  2VAS A;  4DBR A;  4PK4 A;  2X7E A;  3NWN A;  1RY6 A;  3PXN A;  1MMN A;  3COB A;  5HLE A;  4ZCA A;  4E7S A;  1BR2 A;  3L1C A;  3KAR A;  2X2R A;  2V26 A;  4E7Z A;  2HEH A;  1MNE A;  3DCB A;  3X2T A;  2ZFL A;  1G8X A;  1D0Z A;  5GSZ A;  1F9U A;  3HQD A;  2VB6 A;  3DC4 A;  4ETP B;  1V8K A;  5LT1 A;  2X51 A;  2PG2 A;  5LT4 A;  4A14 A;  1D0Y A;  3WRD A;  2FL6 A;  1D1A A;  1VOM A;  3CNZ A;  3LRE A;  2IEH A;  2OWM A;  3T0Q A;  2MYS A;  2WOG A;  4PJJ A;  3ZCW A;  4A28 A;  5LT3 A;  1MMG A;  2UYI A;  4ZHI A;  1CZ7 A;  2O0A A;  1LKX A;  4GKQ A;  4AP0 A;  4B7B A;  3KIN A;  1MKJ A;  2UYM A;  2FL2 A;  3ZFD A;  4BN2 A;  4PJM A;  4PJL A;  1LVK A;  3B6V A;  1D1C A;  1D0X A;  4UBF A;  4DBQ A;  1BG2 A;  2GRY A;  2XT3 A; 
#chains in the Genus database with same CATH homology
 2Y65 A;  2ZFJ A;  1VFW A;  1V8J A;  3K5E A;  3CJO A;  1T5C A;  1VFV A;  1VFX A;  1D1B A;  1KK7 A;  4PFP A;  5LT0 A;  2VVG A;  4LNU K;  2Q2Z A;  2NCD A;  4HNA K;  1VFZ A;  1F9V A;  4PJN A;  3ZFC A;  3GBJ A;  2X7C A;  4ETP A;  1F9W A;  4A51 A;  4BXN A;  3KEN A;  4AS7 A;  4PFO A;  1F9T A;  5LT2 A;  3U06 A;  1X88 A;  4GKR A;  3B6U A;  2FKY A;  4ANJ A;  2ZFK A;  1I6I A;  1FMV A;  2FME A;  1BR4 A;  4H1G A;  1N6M A;  2Q2Y A;  1BR1 A;  3L9H A;  2Y5W A;  2X7D A;  4A50 A;  1GOJ A;  1FMW A;  3WPN A;  2KIN A;  1MMA A;  1SDM A;  4A1Z A;  2ZFI A;  1I5S A;  1YRS A;  4Y05 A;  3BFN A;  4A5Y A;  2XAE A;  1MMD A;  1II6 A;  3H4S A;  4FRZ A;  2G1Q A;  4BBG A;  2ZFM A;  1Q0B A;  2GM1 A;  3K3B A;  2VAS A;  4DBR A;  4PK4 A;  2X7E A;  3NWN A;  1RY6 A;  3PXN A;  1MMN A;  3COB A;  5HLE A;  4ZCA A;  4E7S A;  1BR2 A;  3L1C A;  3KAR A;  2X2R A;  2V26 A;  4E7Z A;  2HEH A;  1MNE A;  3DCB A;  3X2T A;  2ZFL A;  1G8X A;  1D0Z A;  5GSZ A;  1F9U A;  3HQD A;  2VB6 A;  3DC4 A;  1V8K A;  5LT1 A;  2X51 A;  2PG2 A;  5LT4 A;  4A14 A;  1D0Y A;  3WRD A;  2FL6 A;  1D1A A;  1VOM A;  3CNZ A;  3LRE A;  2IEH A;  2OWM A;  3T0Q A;  2MYS A;  2WOG A;  4PJJ A;  3ZCW A;  4A28 A;  5LT3 A;  1MMG A;  2UYI A;  4ZHI A;  1CZ7 A;  1LKX A;  4AP0 A;  4B7B A;  3KIN A;  1MKJ A;  2UYM A;  2FL2 A;  3ZFD A;  4BN2 A;  4PJM A;  4PJL A;  1LVK A;  3B6V A;  1D1C A;  1D0X A;  4UBF A;  4DBQ A;  1BG2 A;  2GRY A;  2XT3 A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...