1Q0BA

Crystal structure of the motor protein ksp in complex with adp and monastrol
Total Genus 110
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
110
sequence length
347
structure length
331
Chain Sequence
b'GKNIQVVVRCRPFNLAERKASAHSIVECDPVRKEVSVRTGGLADKSSRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLHQIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSSDVSERLQMFDDPRNKRGVIIKGLEEITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNK'
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords Kinesin-like protein KIF11
publication title Inhibition of a mitotic motor protein: where, how, and conformational consequences
pubmed doi rcsb
source organism Homo sapiens
molecule tags Cell cycle
total genus 110
structure length 331
sequence length 347
chains with identical sequence B
ec nomenclature
pdb deposition date 2003-07-15

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00225 Kinesin Kinesin motor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.850.10 Alpha Beta 3-Layer(aba) Sandwich Kinesin Kinesin motor domain 1q0bA00
4PK4A 4A51A 2NCDA 4A1ZA 1D1BA 2X51A 4A5YA 3ZCWA 3BFNA 3T0QA 2X7EA 3DCBA 4Y05A 4UBFA 2FL2A 4A50A 2FKYA 3KENA 3KARA 1BG2A 4ZHIA 4PJJA 2VASA 1LVKA 2Q2ZA 1MNEA 2KINA 5LT4A 4BN2A 1D0ZA 1Q0BA 4PJLA 2ZFKA 2UYIA 1T5CA 1II6A 4ANJA 4LNUK 1I6IA 2GM1A 3COBA 1FMWA 4AP0A 2V26A 1BR2A 4A28A 1VFVA 1BR4A 5LT3A 4PFPA 1MMGA 4ETPA 2Y65A 4A14A 1V8KA 2FMEA 2Q2YA 1N6MA 2X2RA 1VFZA 1F9WA 4PJMA 3K3BA 3WRDA 1LKXA 1MKJA 3CJOA 4BXNA 3DC4A 3CNZA 2IEHA 2XAEA 1F9VA 1MMDA 5GSZA 1BR1A 1F9UA 1FMVA 3ZFDA 2FL6A 3H4SA 5LT1A 1YRSA 1D0YA 4GKRA 3K5EA 4B7BA 2ZFLA 4HNAK 3ZFCA 1CZ7A 2ZFJA 2VVGA 2GRYA 3LREA 2Y5WA 4PFOA 2X7CA 1G8XA 1MMAA 1KK7A 1D1CA 3GBJA 1VOMA 3B6VA 4E7SA 1SDMA 4FRZA 3B6UA 2PG2A 1VFXA 3X2TA 2ZFIA 2HEHA 1I5SA 3L9HA 4DBQA 1GOJA 2VB6A 2ZFMA 2UYMA 5HLEA 3PXNA 3WPNA 3HQDA 4AS7A 1D0XA 1RY6A 2G1QA 1V8JA 2MYSA 3L1CA 3KINA 4BBGA 2WOGA 5LT0A 1X88A 3U06A 2OWMA 3NWNA 2XT3A 5LT2A 4PJNA 4H1GA 1VFWA 2X7DA 4E7ZA 1F9TA 4ZCAA 1D1AA 1MMNA 4DBRA
chains in the Genus database with same CATH superfamily
4PK4A 4A51A 2NCDA 4A1ZA 1D1BA 2O0AA 2X51A 4A5YA 3ZCWA 3BFNA 3T0QA 2X7EA 3DCBA 4Y05A 4UBFA 2FL2A 4A50A 2FKYA 3KENA 3KARA 1BG2A 4ZHIA 4PJJA 2VASA 1LVKA 2Q2ZA 1MNEA 2KINA 5LT4A 4BN2A 1D0ZA 1Q0BA 4PJLA 2ZFKA 2UYIA 1T5CA 1II6A 4ANJA 4LNUK 1I6IA 2GM1A 4GKPA 4GKQA 3COBA 1FMWA 4AP0A 2V26A 1BR2A 4A28A 1VFVA 1BR4A 5LT3A 4PFPA 1MMGA 4ETPA 2Y65A 4A14A 1V8KA 2FMEA 2Q2YA 1N6MA 2X2RA 1VFZA 1F9WA 4PJMA 3K3BA 3WRDA 1LKXA 1MKJA 3CJOA 4BXNA 3DC4A 3CNZA 2IEHA 2XAEA 1F9VA 1MMDA 5GSZA 1BR1A 1F9UA 1FMVA 3ZFDA 2FL6A 3H4SA 5LT1A 1YRSA 1D0YA 4GKRA 3K5EA 4B7BA 2ZFLA 4HNAK 3ZFCA 1CZ7A 2ZFJA 4ETPB 2VVGA 2GRYA 3LREA 2Y5WA 4PFOA 2X7CA 1G8XA 1MMAA 1KK7A 1D1CA 3GBJA 1VOMA 3B6VA 4E7SA 1SDMA 4FRZA 3B6UA 2PG2A 1VFXA 3X2TA 2ZFIA 2HEHA 1I5SA 3L9HA 4DBQA 1GOJA 2VB6A 2ZFMA 2UYMA 5HLEA 3PXNA 3WPNA 3HQDA 4AS7A 1D0XA 1RY6A 2G1QA 1V8JA 2MYSA 3L1CA 3KINA 4BBGA 2WOGA 5LT0A 1X88A 3U06A 2OWMA 3NWNA 2XT3A 5LT2A 4PJNA 4H1GA 1VFWA 2X7DA 4E7ZA 1F9TA 4ZCAA 1D1AA 1MMNA 4DBRA
chains in the Genus database with same CATH topology
4PK4A 4A51A 2NCDA 4A1ZA 1D1BA 2X51A 4A5YA 3ZCWA 3BFNA 3T0QA 2X7EA 3DCBA 4Y05A 4UBFA 2FL2A 4A50A 2FKYA 3KENA 3KARA 1BG2A 4ZHIA 4PJJA 2VASA 1LVKA 2Q2ZA 1MNEA 2KINA 5LT4A 4BN2A 1D0ZA 1Q0BA 4PJLA 2ZFKA 2UYIA 1T5CA 1II6A 4ANJA 4LNUK 1I6IA 2GM1A 3COBA 1FMWA 4AP0A 2V26A 1BR2A 4A28A 1VFVA 1BR4A 5LT3A 4PFPA 1MMGA 4ETPA 2Y65A 4A14A 1V8KA 2FMEA 2Q2YA 1N6MA 2X2RA 1VFZA 1F9WA 4PJMA 3K3BA 3WRDA 1LKXA 1MKJA 3CJOA 4BXNA 3DC4A 3CNZA 2IEHA 2XAEA 1F9VA 1MMDA 5GSZA 1BR1A 1F9UA 1FMVA 3ZFDA 2FL6A 3H4SA 5LT1A 1YRSA 1D0YA 4GKRA 3K5EA 4B7BA 2ZFLA 4HNAK 3ZFCA 1CZ7A 2ZFJA 2VVGA 2GRYA 3LREA 2Y5WA 4PFOA 2X7CA 1G8XA 1MMAA 1KK7A 1D1CA 3GBJA 1VOMA 3B6VA 4E7SA 1SDMA 4FRZA 3B6UA 2PG2A 1VFXA 3X2TA 2ZFIA 2HEHA 1I5SA 3L9HA 4DBQA 1GOJA 2VB6A 2ZFMA 2UYMA 5HLEA 3PXNA 3WPNA 3HQDA 4AS7A 1D0XA 1RY6A 2G1QA 1V8JA 2MYSA 3L1CA 3KINA 4BBGA 2WOGA 5LT0A 1X88A 3U06A 2OWMA 3NWNA 2XT3A 5LT2A 4PJNA 4H1GA 1VFWA 2X7DA 4E7ZA 1F9TA 4ZCAA 1D1AA 1MMNA 4DBRA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PK4 A;  4A51 A;  2NCD A;  4A1Z A;  1D1B A;  2X51 A;  4A5Y A;  3ZCW A;  3BFN A;  3T0Q A;  2X7E A;  3DCB A;  4Y05 A;  4UBF A;  2FL2 A;  4A50 A;  2FKY A;  3KEN A;  3KAR A;  1BG2 A;  4ZHI A;  4PJJ A;  2VAS A;  1LVK A;  2Q2Z A;  1MNE A;  2KIN A;  5LT4 A;  4BN2 A;  1D0Z A;  1Q0B A;  4PJL A;  2ZFK A;  2UYI A;  1T5C A;  1II6 A;  4ANJ A;  4LNU K;  1I6I A;  2GM1 A;  3COB A;  1FMW A;  4AP0 A;  2V26 A;  1BR2 A;  4A28 A;  1VFV A;  1BR4 A;  5LT3 A;  4PFP A;  1MMG A;  4ETP A;  2Y65 A;  4A14 A;  1V8K A;  2FME A;  2Q2Y A;  1N6M A;  2X2R A;  1VFZ A;  1F9W A;  4PJM A;  3K3B A;  3WRD A;  1LKX A;  1MKJ A;  3CJO A;  4BXN A;  3DC4 A;  3CNZ A;  2IEH A;  2XAE A;  1F9V A;  1MMD A;  5GSZ A;  1BR1 A;  1F9U A;  1FMV A;  3ZFD A;  2FL6 A;  3H4S A;  5LT1 A;  1YRS A;  1D0Y A;  4GKR A;  3K5E A;  4B7B A;  2ZFL A;  4HNA K;  3ZFC A;  1CZ7 A;  2ZFJ A;  2VVG A;  2GRY A;  3LRE A;  2Y5W A;  4PFO A;  2X7C A;  1G8X A;  1MMA A;  1KK7 A;  1D1C A;  3GBJ A;  1VOM A;  3B6V A;  4E7S A;  1SDM A;  4FRZ A;  3B6U A;  2PG2 A;  1VFX A;  3X2T A;  2ZFI A;  2HEH A;  1I5S A;  3L9H A;  4DBQ A;  1GOJ A;  2VB6 A;  2ZFM A;  2UYM A;  5HLE A;  3PXN A;  3WPN A;  3HQD A;  4AS7 A;  1D0X A;  1RY6 A;  2G1Q A;  1V8J A;  2MYS A;  3L1C A;  3KIN A;  4BBG A;  2WOG A;  5LT0 A;  1X88 A;  3U06 A;  2OWM A;  3NWN A;  2XT3 A;  5LT2 A;  4PJN A;  4H1G A;  1VFW A;  2X7D A;  4E7Z A;  1F9T A;  4ZCA A;  1D1A A;  1MMN A;  4DBR A; 
#chains in the Genus database with same CATH topology
 4PK4 A;  4A51 A;  2NCD A;  4A1Z A;  1D1B A;  2O0A A;  2X51 A;  4A5Y A;  3ZCW A;  3BFN A;  3T0Q A;  2X7E A;  3DCB A;  4Y05 A;  4UBF A;  2FL2 A;  4A50 A;  2FKY A;  3KEN A;  3KAR A;  1BG2 A;  4ZHI A;  4PJJ A;  2VAS A;  1LVK A;  2Q2Z A;  1MNE A;  2KIN A;  5LT4 A;  4BN2 A;  1D0Z A;  1Q0B A;  4PJL A;  2ZFK A;  2UYI A;  1T5C A;  1II6 A;  4ANJ A;  4LNU K;  1I6I A;  2GM1 A;  4GKP A;  4GKQ A;  3COB A;  1FMW A;  4AP0 A;  2V26 A;  1BR2 A;  4A28 A;  1VFV A;  1BR4 A;  5LT3 A;  4PFP A;  1MMG A;  4ETP A;  2Y65 A;  4A14 A;  1V8K A;  2FME A;  2Q2Y A;  1N6M A;  2X2R A;  1VFZ A;  1F9W A;  4PJM A;  3K3B A;  3WRD A;  1LKX A;  1MKJ A;  3CJO A;  4BXN A;  3DC4 A;  3CNZ A;  2IEH A;  2XAE A;  1F9V A;  1MMD A;  5GSZ A;  1BR1 A;  1F9U A;  1FMV A;  3ZFD A;  2FL6 A;  3H4S A;  5LT1 A;  1YRS A;  1D0Y A;  4GKR A;  3K5E A;  4B7B A;  2ZFL A;  4HNA K;  3ZFC A;  1CZ7 A;  2ZFJ A;  4ETP B;  2VVG A;  2GRY A;  3LRE A;  2Y5W A;  4PFO A;  2X7C A;  1G8X A;  1MMA A;  1KK7 A;  1D1C A;  3GBJ A;  1VOM A;  3B6V A;  4E7S A;  1SDM A;  4FRZ A;  3B6U A;  2PG2 A;  1VFX A;  3X2T A;  2ZFI A;  2HEH A;  1I5S A;  3L9H A;  4DBQ A;  1GOJ A;  2VB6 A;  2ZFM A;  2UYM A;  5HLE A;  3PXN A;  3WPN A;  3HQD A;  4AS7 A;  1D0X A;  1RY6 A;  2G1Q A;  1V8J A;  2MYS A;  3L1C A;  3KIN A;  4BBG A;  2WOG A;  5LT0 A;  1X88 A;  3U06 A;  2OWM A;  3NWN A;  2XT3 A;  5LT2 A;  4PJN A;  4H1G A;  1VFW A;  2X7D A;  4E7Z A;  1F9T A;  4ZCA A;  1D1A A;  1MMN A;  4DBR A; 
#chains in the Genus database with same CATH homology
 4PK4 A;  4A51 A;  2NCD A;  4A1Z A;  1D1B A;  2X51 A;  4A5Y A;  3ZCW A;  3BFN A;  3T0Q A;  2X7E A;  3DCB A;  4Y05 A;  4UBF A;  2FL2 A;  4A50 A;  2FKY A;  3KEN A;  3KAR A;  1BG2 A;  4ZHI A;  4PJJ A;  2VAS A;  1LVK A;  2Q2Z A;  1MNE A;  2KIN A;  5LT4 A;  4BN2 A;  1D0Z A;  1Q0B A;  4PJL A;  2ZFK A;  2UYI A;  1T5C A;  1II6 A;  4ANJ A;  4LNU K;  1I6I A;  2GM1 A;  3COB A;  1FMW A;  4AP0 A;  2V26 A;  1BR2 A;  4A28 A;  1VFV A;  1BR4 A;  5LT3 A;  4PFP A;  1MMG A;  4ETP A;  2Y65 A;  4A14 A;  1V8K A;  2FME A;  2Q2Y A;  1N6M A;  2X2R A;  1VFZ A;  1F9W A;  4PJM A;  3K3B A;  3WRD A;  1LKX A;  1MKJ A;  3CJO A;  4BXN A;  3DC4 A;  3CNZ A;  2IEH A;  2XAE A;  1F9V A;  1MMD A;  5GSZ A;  1BR1 A;  1F9U A;  1FMV A;  3ZFD A;  2FL6 A;  3H4S A;  5LT1 A;  1YRS A;  1D0Y A;  4GKR A;  3K5E A;  4B7B A;  2ZFL A;  4HNA K;  3ZFC A;  1CZ7 A;  2ZFJ A;  2VVG A;  2GRY A;  3LRE A;  2Y5W A;  4PFO A;  2X7C A;  1G8X A;  1MMA A;  1KK7 A;  1D1C A;  3GBJ A;  1VOM A;  3B6V A;  4E7S A;  1SDM A;  4FRZ A;  3B6U A;  2PG2 A;  1VFX A;  3X2T A;  2ZFI A;  2HEH A;  1I5S A;  3L9H A;  4DBQ A;  1GOJ A;  2VB6 A;  2ZFM A;  2UYM A;  5HLE A;  3PXN A;  3WPN A;  3HQD A;  4AS7 A;  1D0X A;  1RY6 A;  2G1Q A;  1V8J A;  2MYS A;  3L1C A;  3KIN A;  4BBG A;  2WOG A;  5LT0 A;  1X88 A;  3U06 A;  2OWM A;  3NWN A;  2XT3 A;  5LT2 A;  4PJN A;  4H1G A;  1VFW A;  2X7D A;  4E7Z A;  1F9T A;  4ZCA A;  1D1A A;  1MMN A;  4DBR A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...