3H4SA

Structure of the complex of a mitotic kinesin with its calcium binding regulator
Total Genus 117
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
117
sequence length
376
structure length
359
Chain Sequence
YMKGKIRVYCRIRPLNEKESSEREKQMLTTVDEFTVEHPWKDDKRKQHIYDRVFDMRASQDDIFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGHESNPGLTPRATKELFNILKRDSKRFSFSLKAYMVELYQDTLVDLLLPKRLKLEIKKDSKGMVFVENVTTIPISTLEELRMILERGSEREESSRSHLILSVVIESIDLQTQSAARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGDVIGALSSGNQHIPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLLYASRVRTIVNDPSKHISSKEMVRLKKLVAYWKEQAGKKGEEEDLVDIEEDRTR
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

molecule keywords Kinesin-like calmodulin-binding protein
publication title Structure of the complex of a mitotic kinesin with its calcium binding regulator.
pubmed doi rcsb
source organism Arabidopsis thaliana
molecule tags Motor protein/calcium binding protein
total genus 117
structure length 359
sequence length 376
ec nomenclature
pdb deposition date 2009-04-20

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00225 Kinesin Kinesin motor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.850.10 Alpha Beta 3-Layer(aba) Sandwich Kinesin Kinesin motor domain 3h4sA01
4PJMA 1FMVA 2MYSA 4A14A 1D0YA 3L9HA 2OWMA 2FL6A 1MMDA 4Y05A 3T0QA 2Q2YA 5GSZA 1D1BA 3KARA 4DBQA 1MKJA 2PG2A 3ZCWA 3BFNA 1N6MA 2FKYA 3LREA 1F9UA 3CJOA 3KINA 3PXNA 2XAEA 5HLEA 2X7EA 5LT3A 3NWNA 3X2TA 1BG2A 5LT1A 4ZCAA 2X7CA 4AS7A 1VFVA 2UYMA 4PJLA 4ANJA 1VFXA 4PJJA 3B6VA 3DC4A 1LVKA 1I5SA 1T5CA 4BXNA 4UBFA 2HEHA 1D0XA 1CZ7A 3COBA 4A1ZA 3GBJA 1MMGA 2Y65A 1F9TA 2NCDA 1MNEA 3ZFCA 4BBGA 4PJNA 3WRDA 4E7ZA 4A51A 1VOMA 1BR4A 3DCBA 1VFWA 2ZFKA 2UYIA 4PFOA 2WOGA 1MMAA 1G8XA 1BR2A 4A50A 3U06A 3L1CA 2GRYA 4DBRA 2G1QA 3KENA 4A5YA 1KK7A 3CNZA 1SDMA 4GKRA 2XT3A 1D1AA 1GOJA 2VASA 4H1GA 4PFPA 1Q0BA 2V26A 2X51A 3ZFDA 2X7DA 1F9WA 1RY6A 2IEHA 2VVGA 4ETPA 1D0ZA 2ZFMA 1BR1A 3K3BA 1MMNA 2VB6A 5LT4A 2X2RA 5LT2A 2GM1A 2ZFJA 2KINA 4BN2A 2FL2A 4LNUK 3H4SA 1LKXA 4B7BA 3HQDA 4PK4A 3WPNA 4A28A 1I6IA 4AP0A 1V8JA 2Y5WA 2FMEA 1V8KA 2ZFIA 1FMWA 4E7SA 1X88A 1VFZA 2ZFLA 1YRSA 4ZHIA 4HNAK 2Q2ZA 4FRZA 1D1CA 3K5EA 3B6UA 1F9VA 5LT0A 1II6A
chains in the Genus database with same CATH superfamily
4PJMA 1FMVA 2MYSA 4A14A 1D0YA 3L9HA 2OWMA 2FL6A 1MMDA 4Y05A 3T0QA 2Q2YA 5GSZA 1D1BA 3KARA 4DBQA 1MKJA 2PG2A 3ZCWA 3BFNA 1N6MA 2FKYA 3LREA 1F9UA 3CJOA 3KINA 3PXNA 2XAEA 5HLEA 2X7EA 5LT3A 3NWNA 3X2TA 1BG2A 5LT1A 4ZCAA 2X7CA 4AS7A 1VFVA 2UYMA 4PJLA 4ANJA 1VFXA 4PJJA 3B6VA 3DC4A 1LVKA 1I5SA 1T5CA 4BXNA 4UBFA 2HEHA 1D0XA 1CZ7A 3COBA 4A1ZA 3GBJA 1MMGA 2Y65A 1F9TA 2NCDA 1MNEA 3ZFCA 4BBGA 4PJNA 3WRDA 4GKQA 4E7ZA 2O0AA 4A51A 1VOMA 1BR4A 3DCBA 1VFWA 2ZFKA 2UYIA 4PFOA 2WOGA 1MMAA 1G8XA 1BR2A 4A50A 3U06A 3L1CA 2GRYA 4DBRA 2G1QA 3KENA 4A5YA 1KK7A 3CNZA 1SDMA 4GKRA 2XT3A 1D1AA 1GOJA 2VASA 4H1GA 4PFPA 1Q0BA 2V26A 2X51A 3ZFDA 2X7DA 1F9WA 1RY6A 2IEHA 2VVGA 4ETPA 1D0ZA 2ZFMA 1BR1A 3K3BA 1MMNA 2VB6A 5LT4A 2X2RA 5LT2A 2GM1A 2ZFJA 2KINA 4BN2A 2FL2A 4LNUK 3H4SA 1LKXA 4B7BA 3HQDA 4PK4A 3WPNA 4A28A 1I6IA 4AP0A 1V8JA 2Y5WA 2FMEA 1V8KA 2ZFIA 1FMWA 4E7SA 1X88A 1VFZA 2ZFLA 1YRSA 4ZHIA 4HNAK 2Q2ZA 4GKPA 4FRZA 1D1CA 3K5EA 3B6UA 4ETPB 1F9VA 5LT0A 1II6A
chains in the Genus database with same CATH topology
4PJMA 1FMVA 2MYSA 4A14A 1D0YA 3L9HA 2OWMA 2FL6A 1MMDA 4Y05A 3T0QA 2Q2YA 5GSZA 1D1BA 3KARA 4DBQA 1MKJA 2PG2A 3ZCWA 3BFNA 1N6MA 2FKYA 3LREA 1F9UA 3CJOA 3KINA 3PXNA 2XAEA 5HLEA 2X7EA 5LT3A 3NWNA 3X2TA 1BG2A 5LT1A 4ZCAA 2X7CA 4AS7A 1VFVA 2UYMA 4PJLA 4ANJA 1VFXA 4PJJA 3B6VA 3DC4A 1LVKA 1I5SA 1T5CA 4BXNA 4UBFA 2HEHA 1D0XA 1CZ7A 3COBA 4A1ZA 3GBJA 1MMGA 2Y65A 1F9TA 2NCDA 1MNEA 3ZFCA 4BBGA 4PJNA 3WRDA 4E7ZA 4A51A 1VOMA 1BR4A 3DCBA 1VFWA 2ZFKA 2UYIA 4PFOA 2WOGA 1MMAA 1G8XA 1BR2A 4A50A 3U06A 3L1CA 2GRYA 4DBRA 2G1QA 3KENA 4A5YA 1KK7A 3CNZA 1SDMA 4GKRA 2XT3A 1D1AA 1GOJA 2VASA 4H1GA 4PFPA 1Q0BA 2V26A 2X51A 3ZFDA 2X7DA 1F9WA 1RY6A 2IEHA 2VVGA 4ETPA 1D0ZA 2ZFMA 1BR1A 3K3BA 1MMNA 2VB6A 5LT4A 2X2RA 5LT2A 2GM1A 2ZFJA 2KINA 4BN2A 2FL2A 4LNUK 3H4SA 1LKXA 4B7BA 3HQDA 4PK4A 3WPNA 4A28A 1I6IA 4AP0A 1V8JA 2Y5WA 2FMEA 1V8KA 2ZFIA 1FMWA 4E7SA 1X88A 1VFZA 2ZFLA 1YRSA 4ZHIA 4HNAK 2Q2ZA 4FRZA 1D1CA 3K5EA 3B6UA 1F9VA 5LT0A 1II6A
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 4PJM A;  1FMV A;  2MYS A;  4A14 A;  1D0Y A;  3L9H A;  2OWM A;  2FL6 A;  1MMD A;  4Y05 A;  3T0Q A;  2Q2Y A;  5GSZ A;  1D1B A;  3KAR A;  4DBQ A;  1MKJ A;  2PG2 A;  3ZCW A;  3BFN A;  1N6M A;  2FKY A;  3LRE A;  1F9U A;  3CJO A;  3KIN A;  3PXN A;  2XAE A;  5HLE A;  2X7E A;  5LT3 A;  3NWN A;  3X2T A;  1BG2 A;  5LT1 A;  4ZCA A;  2X7C A;  4AS7 A;  1VFV A;  2UYM A;  4PJL A;  4ANJ A;  1VFX A;  4PJJ A;  3B6V A;  3DC4 A;  1LVK A;  1I5S A;  1T5C A;  4BXN A;  4UBF A;  2HEH A;  1D0X A;  1CZ7 A;  3COB A;  4A1Z A;  3GBJ A;  1MMG A;  2Y65 A;  1F9T A;  2NCD A;  1MNE A;  3ZFC A;  4BBG A;  4PJN A;  3WRD A;  4E7Z A;  4A51 A;  1VOM A;  1BR4 A;  3DCB A;  1VFW A;  2ZFK A;  2UYI A;  4PFO A;  2WOG A;  1MMA A;  1G8X A;  1BR2 A;  4A50 A;  3U06 A;  3L1C A;  2GRY A;  4DBR A;  2G1Q A;  3KEN A;  4A5Y A;  1KK7 A;  3CNZ A;  1SDM A;  4GKR A;  2XT3 A;  1D1A A;  1GOJ A;  2VAS A;  4H1G A;  4PFP A;  1Q0B A;  2V26 A;  2X51 A;  3ZFD A;  2X7D A;  1F9W A;  1RY6 A;  2IEH A;  2VVG A;  4ETP A;  1D0Z A;  2ZFM A;  1BR1 A;  3K3B A;  1MMN A;  2VB6 A;  5LT4 A;  2X2R A;  5LT2 A;  2GM1 A;  2ZFJ A;  2KIN A;  4BN2 A;  2FL2 A;  4LNU K;  3H4S A;  1LKX A;  4B7B A;  3HQD A;  4PK4 A;  3WPN A;  4A28 A;  1I6I A;  4AP0 A;  1V8J A;  2Y5W A;  2FME A;  1V8K A;  2ZFI A;  1FMW A;  4E7S A;  1X88 A;  1VFZ A;  2ZFL A;  1YRS A;  4ZHI A;  4HNA K;  2Q2Z A;  4FRZ A;  1D1C A;  3K5E A;  3B6U A;  1F9V A;  5LT0 A;  1II6 A; 
#chains in the Genus database with same CATH topology
 4PJM A;  1FMV A;  2MYS A;  4A14 A;  1D0Y A;  3L9H A;  2OWM A;  2FL6 A;  1MMD A;  4Y05 A;  3T0Q A;  2Q2Y A;  5GSZ A;  1D1B A;  3KAR A;  4DBQ A;  1MKJ A;  2PG2 A;  3ZCW A;  3BFN A;  1N6M A;  2FKY A;  3LRE A;  1F9U A;  3CJO A;  3KIN A;  3PXN A;  2XAE A;  5HLE A;  2X7E A;  5LT3 A;  3NWN A;  3X2T A;  1BG2 A;  5LT1 A;  4ZCA A;  2X7C A;  4AS7 A;  1VFV A;  2UYM A;  4PJL A;  4ANJ A;  1VFX A;  4PJJ A;  3B6V A;  3DC4 A;  1LVK A;  1I5S A;  1T5C A;  4BXN A;  4UBF A;  2HEH A;  1D0X A;  1CZ7 A;  3COB A;  4A1Z A;  3GBJ A;  1MMG A;  2Y65 A;  1F9T A;  2NCD A;  1MNE A;  3ZFC A;  4BBG A;  4PJN A;  3WRD A;  4GKQ A;  4E7Z A;  2O0A A;  4A51 A;  1VOM A;  1BR4 A;  3DCB A;  1VFW A;  2ZFK A;  2UYI A;  4PFO A;  2WOG A;  1MMA A;  1G8X A;  1BR2 A;  4A50 A;  3U06 A;  3L1C A;  2GRY A;  4DBR A;  2G1Q A;  3KEN A;  4A5Y A;  1KK7 A;  3CNZ A;  1SDM A;  4GKR A;  2XT3 A;  1D1A A;  1GOJ A;  2VAS A;  4H1G A;  4PFP A;  1Q0B A;  2V26 A;  2X51 A;  3ZFD A;  2X7D A;  1F9W A;  1RY6 A;  2IEH A;  2VVG A;  4ETP A;  1D0Z A;  2ZFM A;  1BR1 A;  3K3B A;  1MMN A;  2VB6 A;  5LT4 A;  2X2R A;  5LT2 A;  2GM1 A;  2ZFJ A;  2KIN A;  4BN2 A;  2FL2 A;  4LNU K;  3H4S A;  1LKX A;  4B7B A;  3HQD A;  4PK4 A;  3WPN A;  4A28 A;  1I6I A;  4AP0 A;  1V8J A;  2Y5W A;  2FME A;  1V8K A;  2ZFI A;  1FMW A;  4E7S A;  1X88 A;  1VFZ A;  2ZFL A;  1YRS A;  4ZHI A;  4HNA K;  2Q2Z A;  4GKP A;  4FRZ A;  1D1C A;  3K5E A;  3B6U A;  4ETP B;  1F9V A;  5LT0 A;  1II6 A; 
#chains in the Genus database with same CATH homology
 4PJM A;  1FMV A;  2MYS A;  4A14 A;  1D0Y A;  3L9H A;  2OWM A;  2FL6 A;  1MMD A;  4Y05 A;  3T0Q A;  2Q2Y A;  5GSZ A;  1D1B A;  3KAR A;  4DBQ A;  1MKJ A;  2PG2 A;  3ZCW A;  3BFN A;  1N6M A;  2FKY A;  3LRE A;  1F9U A;  3CJO A;  3KIN A;  3PXN A;  2XAE A;  5HLE A;  2X7E A;  5LT3 A;  3NWN A;  3X2T A;  1BG2 A;  5LT1 A;  4ZCA A;  2X7C A;  4AS7 A;  1VFV A;  2UYM A;  4PJL A;  4ANJ A;  1VFX A;  4PJJ A;  3B6V A;  3DC4 A;  1LVK A;  1I5S A;  1T5C A;  4BXN A;  4UBF A;  2HEH A;  1D0X A;  1CZ7 A;  3COB A;  4A1Z A;  3GBJ A;  1MMG A;  2Y65 A;  1F9T A;  2NCD A;  1MNE A;  3ZFC A;  4BBG A;  4PJN A;  3WRD A;  4E7Z A;  4A51 A;  1VOM A;  1BR4 A;  3DCB A;  1VFW A;  2ZFK A;  2UYI A;  4PFO A;  2WOG A;  1MMA A;  1G8X A;  1BR2 A;  4A50 A;  3U06 A;  3L1C A;  2GRY A;  4DBR A;  2G1Q A;  3KEN A;  4A5Y A;  1KK7 A;  3CNZ A;  1SDM A;  4GKR A;  2XT3 A;  1D1A A;  1GOJ A;  2VAS A;  4H1G A;  4PFP A;  1Q0B A;  2V26 A;  2X51 A;  3ZFD A;  2X7D A;  1F9W A;  1RY6 A;  2IEH A;  2VVG A;  4ETP A;  1D0Z A;  2ZFM A;  1BR1 A;  3K3B A;  1MMN A;  2VB6 A;  5LT4 A;  2X2R A;  5LT2 A;  2GM1 A;  2ZFJ A;  2KIN A;  4BN2 A;  2FL2 A;  4LNU K;  3H4S A;  1LKX A;  4B7B A;  3HQD A;  4PK4 A;  3WPN A;  4A28 A;  1I6I A;  4AP0 A;  1V8J A;  2Y5W A;  2FME A;  1V8K A;  2ZFI A;  1FMW A;  4E7S A;  1X88 A;  1VFZ A;  2ZFL A;  1YRS A;  4ZHI A;  4HNA K;  2Q2Z A;  4FRZ A;  1D1C A;  3K5E A;  3B6U A;  1F9V A;  5LT0 A;  1II6 A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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