3L1CA

Kinesin-14 protein ncd, t436s mutant
Total Genus 120
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
120
sequence length
380
structure length
355
Chain Sequence
b'MHAALSTEVVHLRQRTEELLRCNEQQAAELETCKEQLFQSNMERKELHNTVMDLRGNIRVFCRIRPPLESEENRMCCTWTYHDESTVELQSIDAGQQIFSFDQVFHPLSSQSDIFEMVSPLIQSALDGYNICIFAYGQSGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHLMHTAKMNSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTSNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCK'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Kinesin-14 Ncd
publication title A kinesin motor in a force-producing conformation.
pubmed doi rcsb
source organism Drosophila melanogaster
molecule tags Motor protein
total genus 120
structure length 355
sequence length 380
chains with identical sequence B
ec nomenclature
pdb deposition date 2009-12-11

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00225 Kinesin Kinesin motor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.850.10 Alpha Beta 3-Layer(aba) Sandwich Kinesin Kinesin motor domain 3l1cA00
3B6VA 2IEHA 1D1BA 2Q2YA 2NCDA 2MYSA 2GRYA 2X2RA 1D0ZA 1F9TA 2X7DA 1LVKA 2ZFJA 3KENA 2WOGA 1N6MA 4PJNA 1CZ7A 1X88A 3K3BA 3COBA 1BR1A 2UYIA 4GKRA 4H1GA 4E7ZA 1F9UA 1YRSA 2FL2A 5LT0A 1VFVA 1D1CA 1LKXA 1FMWA 3NWNA 4PFPA 1G8XA 2VB6A 1KK7A 4BN2A 1I6IA 1MMAA 2GM1A 4PJMA 4A28A 1D1AA 3L1CA 3L9HA 1MKJA 3KARA 4E7SA 3HQDA 2UYMA 2XT3A 4BBGA 2Y5WA 5LT1A 5LT3A 2X7EA 1VFWA 4A5YA 3DCBA 2VVGA 1GOJA 2G1QA 4AS7A 1F9WA 1BG2A 2V26A 3ZFCA 4ETPA 3BFNA 1MMDA 5LT4A 4A1ZA 2HEHA 1II6A 3WRDA 3LREA 4A51A 4ANJA 2ZFKA 4PFOA 4BXNA 1FMVA 2OWMA 1BR2A 1D0XA 3WPNA 4FRZA 4A14A 1RY6A 2PG2A 3CJOA 5HLEA 4ZHIA 4DBRA 3GBJA 3T0QA 1V8JA 4B7BA 1D0YA 2X7CA 4PJJA 1VFZA 2XAEA 5GSZA 2Y65A 2ZFIA 1BR4A 1V8KA 3ZFDA 1T5CA 1MMNA 4PJLA 3U06A 4PK4A 3PXNA 3X2TA 2ZFLA 4AP0A 2FL6A 2KINA 2VASA 4DBQA 4LNUK 4ZCAA 4A50A 1F9VA 3ZCWA 3K5EA 2Q2ZA 3CNZA 3KINA 3B6UA 2FMEA 1VOMA 1Q0BA 3DC4A 4HNAK 1VFXA 1SDMA 4UBFA 4Y05A 2ZFMA 1MMGA 2X51A 1I5SA 3H4SA 1MNEA 5LT2A 2FKYA
chains in the Genus database with same CATH superfamily
3B6VA 2IEHA 4GKPA 1D1BA 2Q2YA 2NCDA 2MYSA 2GRYA 2X2RA 1D0ZA 1F9TA 2X7DA 1LVKA 2ZFJA 3KENA 2WOGA 1N6MA 4PJNA 1CZ7A 1X88A 3K3BA 3COBA 1BR1A 2UYIA 4GKRA 4H1GA 4E7ZA 1F9UA 1YRSA 2FL2A 5LT0A 1VFVA 1D1CA 1LKXA 1FMWA 3NWNA 4PFPA 1G8XA 2VB6A 1KK7A 4BN2A 1I6IA 1MMAA 2GM1A 4PJMA 4A28A 1D1AA 3L1CA 3L9HA 1MKJA 3KARA 4E7SA 3HQDA 2UYMA 2XT3A 4BBGA 2Y5WA 5LT1A 5LT3A 2X7EA 1VFWA 4A5YA 3DCBA 2VVGA 1GOJA 2G1QA 4AS7A 1F9WA 1BG2A 2V26A 3ZFCA 4ETPA 3BFNA 1MMDA 5LT4A 4A1ZA 2HEHA 1II6A 3WRDA 3LREA 4A51A 4ANJA 2ZFKA 4PFOA 4BXNA 1FMVA 2OWMA 1BR2A 1D0XA 3WPNA 4FRZA 4A14A 1RY6A 2PG2A 3CJOA 5HLEA 4GKQA 4ZHIA 4DBRA 3GBJA 3T0QA 1V8JA 4B7BA 1D0YA 2X7CA 4PJJA 1VFZA 2XAEA 5GSZA 2Y65A 2ZFIA 1BR4A 1V8KA 3ZFDA 4ETPB 1T5CA 1MMNA 4PJLA 3U06A 4PK4A 3PXNA 3X2TA 2ZFLA 4AP0A 2FL6A 2KINA 2VASA 4DBQA 4LNUK 4ZCAA 4A50A 1F9VA 3ZCWA 3K5EA 2Q2ZA 3CNZA 3KINA 3B6UA 2FMEA 1VOMA 1Q0BA 3DC4A 4HNAK 1VFXA 1SDMA 4UBFA 4Y05A 2ZFMA 1MMGA 2O0AA 2X51A 1I5SA 3H4SA 1MNEA 5LT2A 2FKYA
chains in the Genus database with same CATH topology
3B6VA 2IEHA 1D1BA 2Q2YA 2NCDA 2MYSA 2GRYA 2X2RA 1D0ZA 1F9TA 2X7DA 1LVKA 2ZFJA 3KENA 2WOGA 1N6MA 4PJNA 1CZ7A 1X88A 3K3BA 3COBA 1BR1A 2UYIA 4GKRA 4H1GA 4E7ZA 1F9UA 1YRSA 2FL2A 5LT0A 1VFVA 1D1CA 1LKXA 1FMWA 3NWNA 4PFPA 1G8XA 2VB6A 1KK7A 4BN2A 1I6IA 1MMAA 2GM1A 4PJMA 4A28A 1D1AA 3L1CA 3L9HA 1MKJA 3KARA 4E7SA 3HQDA 2UYMA 2XT3A 4BBGA 2Y5WA 5LT1A 5LT3A 2X7EA 1VFWA 4A5YA 3DCBA 2VVGA 1GOJA 2G1QA 4AS7A 1F9WA 1BG2A 2V26A 3ZFCA 4ETPA 3BFNA 1MMDA 5LT4A 4A1ZA 2HEHA 1II6A 3WRDA 3LREA 4A51A 4ANJA 2ZFKA 4PFOA 4BXNA 1FMVA 2OWMA 1BR2A 1D0XA 3WPNA 4FRZA 4A14A 1RY6A 2PG2A 3CJOA 5HLEA 4ZHIA 4DBRA 3GBJA 3T0QA 1V8JA 4B7BA 1D0YA 2X7CA 4PJJA 1VFZA 2XAEA 5GSZA 2Y65A 2ZFIA 1BR4A 1V8KA 3ZFDA 1T5CA 1MMNA 4PJLA 3U06A 4PK4A 3PXNA 3X2TA 2ZFLA 4AP0A 2FL6A 2KINA 2VASA 4DBQA 4LNUK 4ZCAA 4A50A 1F9VA 3ZCWA 3K5EA 2Q2ZA 3CNZA 3KINA 3B6UA 2FMEA 1VOMA 1Q0BA 3DC4A 4HNAK 1VFXA 1SDMA 4UBFA 4Y05A 2ZFMA 1MMGA 2X51A 1I5SA 3H4SA 1MNEA 5LT2A 2FKYA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 3B6V A;  2IEH A;  1D1B A;  2Q2Y A;  2NCD A;  2MYS A;  2GRY A;  2X2R A;  1D0Z A;  1F9T A;  2X7D A;  1LVK A;  2ZFJ A;  3KEN A;  2WOG A;  1N6M A;  4PJN A;  1CZ7 A;  1X88 A;  3K3B A;  3COB A;  1BR1 A;  2UYI A;  4GKR A;  4H1G A;  4E7Z A;  1F9U A;  1YRS A;  2FL2 A;  5LT0 A;  1VFV A;  1D1C A;  1LKX A;  1FMW A;  3NWN A;  4PFP A;  1G8X A;  2VB6 A;  1KK7 A;  4BN2 A;  1I6I A;  1MMA A;  2GM1 A;  4PJM A;  4A28 A;  1D1A A;  3L1C A;  3L9H A;  1MKJ A;  3KAR A;  4E7S A;  3HQD A;  2UYM A;  2XT3 A;  4BBG A;  2Y5W A;  5LT1 A;  5LT3 A;  2X7E A;  1VFW A;  4A5Y A;  3DCB A;  2VVG A;  1GOJ A;  2G1Q A;  4AS7 A;  1F9W A;  1BG2 A;  2V26 A;  3ZFC A;  4ETP A;  3BFN A;  1MMD A;  5LT4 A;  4A1Z A;  2HEH A;  1II6 A;  3WRD A;  3LRE A;  4A51 A;  4ANJ A;  2ZFK A;  4PFO A;  4BXN A;  1FMV A;  2OWM A;  1BR2 A;  1D0X A;  3WPN A;  4FRZ A;  4A14 A;  1RY6 A;  2PG2 A;  3CJO A;  5HLE A;  4ZHI A;  4DBR A;  3GBJ A;  3T0Q A;  1V8J A;  4B7B A;  1D0Y A;  2X7C A;  4PJJ A;  1VFZ A;  2XAE A;  5GSZ A;  2Y65 A;  2ZFI A;  1BR4 A;  1V8K A;  3ZFD A;  1T5C A;  1MMN A;  4PJL A;  3U06 A;  4PK4 A;  3PXN A;  3X2T A;  2ZFL A;  4AP0 A;  2FL6 A;  2KIN A;  2VAS A;  4DBQ A;  4LNU K;  4ZCA A;  4A50 A;  1F9V A;  3ZCW A;  3K5E A;  2Q2Z A;  3CNZ A;  3KIN A;  3B6U A;  2FME A;  1VOM A;  1Q0B A;  3DC4 A;  4HNA K;  1VFX A;  1SDM A;  4UBF A;  4Y05 A;  2ZFM A;  1MMG A;  2X51 A;  1I5S A;  3H4S A;  1MNE A;  5LT2 A;  2FKY A; 
#chains in the Genus database with same CATH topology
 3B6V A;  2IEH A;  4GKP A;  1D1B A;  2Q2Y A;  2NCD A;  2MYS A;  2GRY A;  2X2R A;  1D0Z A;  1F9T A;  2X7D A;  1LVK A;  2ZFJ A;  3KEN A;  2WOG A;  1N6M A;  4PJN A;  1CZ7 A;  1X88 A;  3K3B A;  3COB A;  1BR1 A;  2UYI A;  4GKR A;  4H1G A;  4E7Z A;  1F9U A;  1YRS A;  2FL2 A;  5LT0 A;  1VFV A;  1D1C A;  1LKX A;  1FMW A;  3NWN A;  4PFP A;  1G8X A;  2VB6 A;  1KK7 A;  4BN2 A;  1I6I A;  1MMA A;  2GM1 A;  4PJM A;  4A28 A;  1D1A A;  3L1C A;  3L9H A;  1MKJ A;  3KAR A;  4E7S A;  3HQD A;  2UYM A;  2XT3 A;  4BBG A;  2Y5W A;  5LT1 A;  5LT3 A;  2X7E A;  1VFW A;  4A5Y A;  3DCB A;  2VVG A;  1GOJ A;  2G1Q A;  4AS7 A;  1F9W A;  1BG2 A;  2V26 A;  3ZFC A;  4ETP A;  3BFN A;  1MMD A;  5LT4 A;  4A1Z A;  2HEH A;  1II6 A;  3WRD A;  3LRE A;  4A51 A;  4ANJ A;  2ZFK A;  4PFO A;  4BXN A;  1FMV A;  2OWM A;  1BR2 A;  1D0X A;  3WPN A;  4FRZ A;  4A14 A;  1RY6 A;  2PG2 A;  3CJO A;  5HLE A;  4GKQ A;  4ZHI A;  4DBR A;  3GBJ A;  3T0Q A;  1V8J A;  4B7B A;  1D0Y A;  2X7C A;  4PJJ A;  1VFZ A;  2XAE A;  5GSZ A;  2Y65 A;  2ZFI A;  1BR4 A;  1V8K A;  3ZFD A;  4ETP B;  1T5C A;  1MMN A;  4PJL A;  3U06 A;  4PK4 A;  3PXN A;  3X2T A;  2ZFL A;  4AP0 A;  2FL6 A;  2KIN A;  2VAS A;  4DBQ A;  4LNU K;  4ZCA A;  4A50 A;  1F9V A;  3ZCW A;  3K5E A;  2Q2Z A;  3CNZ A;  3KIN A;  3B6U A;  2FME A;  1VOM A;  1Q0B A;  3DC4 A;  4HNA K;  1VFX A;  1SDM A;  4UBF A;  4Y05 A;  2ZFM A;  1MMG A;  2O0A A;  2X51 A;  1I5S A;  3H4S A;  1MNE A;  5LT2 A;  2FKY A; 
#chains in the Genus database with same CATH homology
 3B6V A;  2IEH A;  1D1B A;  2Q2Y A;  2NCD A;  2MYS A;  2GRY A;  2X2R A;  1D0Z A;  1F9T A;  2X7D A;  1LVK A;  2ZFJ A;  3KEN A;  2WOG A;  1N6M A;  4PJN A;  1CZ7 A;  1X88 A;  3K3B A;  3COB A;  1BR1 A;  2UYI A;  4GKR A;  4H1G A;  4E7Z A;  1F9U A;  1YRS A;  2FL2 A;  5LT0 A;  1VFV A;  1D1C A;  1LKX A;  1FMW A;  3NWN A;  4PFP A;  1G8X A;  2VB6 A;  1KK7 A;  4BN2 A;  1I6I A;  1MMA A;  2GM1 A;  4PJM A;  4A28 A;  1D1A A;  3L1C A;  3L9H A;  1MKJ A;  3KAR A;  4E7S A;  3HQD A;  2UYM A;  2XT3 A;  4BBG A;  2Y5W A;  5LT1 A;  5LT3 A;  2X7E A;  1VFW A;  4A5Y A;  3DCB A;  2VVG A;  1GOJ A;  2G1Q A;  4AS7 A;  1F9W A;  1BG2 A;  2V26 A;  3ZFC A;  4ETP A;  3BFN A;  1MMD A;  5LT4 A;  4A1Z A;  2HEH A;  1II6 A;  3WRD A;  3LRE A;  4A51 A;  4ANJ A;  2ZFK A;  4PFO A;  4BXN A;  1FMV A;  2OWM A;  1BR2 A;  1D0X A;  3WPN A;  4FRZ A;  4A14 A;  1RY6 A;  2PG2 A;  3CJO A;  5HLE A;  4ZHI A;  4DBR A;  3GBJ A;  3T0Q A;  1V8J A;  4B7B A;  1D0Y A;  2X7C A;  4PJJ A;  1VFZ A;  2XAE A;  5GSZ A;  2Y65 A;  2ZFI A;  1BR4 A;  1V8K A;  3ZFD A;  1T5C A;  1MMN A;  4PJL A;  3U06 A;  4PK4 A;  3PXN A;  3X2T A;  2ZFL A;  4AP0 A;  2FL6 A;  2KIN A;  2VAS A;  4DBQ A;  4LNU K;  4ZCA A;  4A50 A;  1F9V A;  3ZCW A;  3K5E A;  2Q2Z A;  3CNZ A;  3KIN A;  3B6U A;  2FME A;  1VOM A;  1Q0B A;  3DC4 A;  4HNA K;  1VFX A;  1SDM A;  4UBF A;  4Y05 A;  2ZFM A;  1MMG A;  2X51 A;  1I5S A;  3H4S A;  1MNE A;  5LT2 A;  2FKY A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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