4BN2A

The crystal structure of kinesin-like protein kif15
Total Genus 100
Loading diagram...

The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
100
sequence length
352
structure length
326
Chain Sequence
GDAIKVFVRIRPPAERSQNLCLSVLSSTSLRLHSNPEPKTFTFDHVADVDTTQESVFATVAKSIVESCMSGYNGTIFAYGQTGSGKTFTMMGPSESDNFSHNLRGVIPRSFEYLFSLIDREKGKSFLCKCSFIEIYNEQIYDLLDSASAGLYLREHIKKGVFVVGAVEQVVTSAAEAYQVLSGGWRNRRVASTSMNRESSRSHAVFTITIESMEKSNEIVNIRTSLLNLVDLAGSERNINRSLSCLGQVITALVDVGNGKQRHVCYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQRAKLIKNKAVVNEDTQG
Loading diagram...

The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
{{ tooltip.sname }} connected with {{ tooltip.tname }} : {{qFormat(tooltip.svalue) }}
molecule keywords KINESIN-LIKE PROTEIN KIF15
publication title The Crystal Structure and Biochemical Characterization of Kif15: A Bifunctional Molecular Motor Involved in Bipolar Spindle Formation and Neuronal Development
pubmed doi rcsb
source organism Homo sapiens
molecule tags Motor protein
total genus 100
structure length 326
sequence length 352
chains with identical sequence B, C
ec nomenclature
pdb deposition date 2013-05-13

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00225 Kinesin Kinesin motor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.850.10 Alpha Beta 3-Layer(aba) Sandwich Kinesin Kinesin motor domain 4bn2A00
1VFWA 3T0QA 1FMWA 1I5SA 1V8JA 2XAEA 3PXNA 5GSZA 4HNAK 2VASA 2XT3A 1BR4A 4ZHIA 2X7DA 4B7BA 4A51A 4ETPA 2X7CA 3DCBA 2FMEA 5HLEA 3BFNA 2GRYA 2MYSA 2UYMA 1VFVA 4BBGA 2ZFIA 2VB6A 2X51A 4PFOA 3LREA 4PFPA 2X2RA 4AS7A 1Q0BA 1D1CA 3CNZA 3DC4A 3GBJA 4PJNA 1MKJA 1T5CA 5LT4A 1MMAA 1VOMA 1MMGA 4ZCAA 4E7ZA 1MMDA 2Y5WA 2WOGA 4PJMA 2GM1A 4ANJA 1D0YA 1F9WA 4H1GA 4UBFA 1GOJA 1X88A 2Q2ZA 2ZFLA 1SDMA 1F9TA 1RY6A 4PJLA 2Y65A 3B6VA 1VFXA 3CJOA 3KINA 4LNUK 4A14A 2FKYA 2X7EA 5LT3A 3COBA 1N6MA 2KINA 3L1CA 1VFZA 1F9VA 2OWMA 1I6IA 4Y05A 2Q2YA 3HQDA 2PG2A 1F9UA 2NCDA 1MNEA 1LVKA 3X2TA 3ZFCA 1CZ7A 1FMVA 4PJJA 1YRSA 2FL6A 1BR2A 3K3BA 5LT0A 2ZFJA 1MMNA 4AP0A 1II6A 1D0XA 4A5YA 2G1QA 4E7SA 4BXNA 2ZFMA 1V8KA 1D1AA 2VVGA 4A28A 4A1ZA 4DBRA 3ZCWA 1D1BA 2V26A 3L9HA 4FRZA 3ZFDA 2ZFKA 4A50A 3WPNA 4DBQA 3NWNA 2UYIA 3K5EA 5LT2A 3KARA 3U06A 1D0ZA 3WRDA 3H4SA 1LKXA 4PK4A 2FL2A 1BR1A 4BN2A 2HEHA 2IEHA 1G8XA 5LT1A 1KK7A 4GKRA 3B6UA 1BG2A 3KENA
chains in the Genus database with same CATH superfamily
1VFWA 3T0QA 1FMWA 1I5SA 1V8JA 2XAEA 3PXNA 5GSZA 4HNAK 2VASA 2XT3A 1BR4A 4ZHIA 2X7DA 4B7BA 4A51A 4ETPA 2X7CA 3DCBA 2FMEA 5HLEA 3BFNA 2GRYA 2MYSA 2UYMA 1VFVA 4BBGA 2ZFIA 2VB6A 2X51A 4PFOA 3LREA 4PFPA 2X2RA 4AS7A 1Q0BA 1D1CA 3CNZA 3DC4A 3GBJA 4PJNA 1MKJA 1T5CA 5LT4A 1MMAA 1VOMA 1MMGA 4ZCAA 4E7ZA 1MMDA 2Y5WA 2WOGA 4PJMA 2GM1A 4ANJA 1D0YA 4GKQA 1F9WA 4H1GA 4UBFA 1GOJA 1X88A 2Q2ZA 2ZFLA 1SDMA 1F9TA 1RY6A 4PJLA 2Y65A 3B6VA 1VFXA 3CJOA 3KINA 4LNUK 4A14A 2FKYA 2X7EA 5LT3A 3COBA 1N6MA 2KINA 3L1CA 1VFZA 1F9VA 2OWMA 1I6IA 4Y05A 2Q2YA 4GKPA 3HQDA 2PG2A 1F9UA 2NCDA 1MNEA 1LVKA 3X2TA 3ZFCA 2O0AA 1CZ7A 1FMVA 4PJJA 1YRSA 2FL6A 1BR2A 3K3BA 5LT0A 2ZFJA 1MMNA 4AP0A 1II6A 1D0XA 4A5YA 2G1QA 4E7SA 4BXNA 2ZFMA 1V8KA 1D1AA 2VVGA 4A28A 4A1ZA 4DBRA 3ZCWA 1D1BA 2V26A 3L9HA 4FRZA 3ZFDA 2ZFKA 4A50A 3WPNA 4DBQA 3NWNA 2UYIA 3K5EA 5LT2A 3KARA 3U06A 1D0ZA 4ETPB 3WRDA 3H4SA 1LKXA 4PK4A 2FL2A 1BR1A 4BN2A 2HEHA 2IEHA 1G8XA 5LT1A 1KK7A 4GKRA 3B6UA 1BG2A 3KENA
chains in the Genus database with same CATH topology
1VFWA 3T0QA 1FMWA 1I5SA 1V8JA 2XAEA 3PXNA 5GSZA 4HNAK 2VASA 2XT3A 1BR4A 4ZHIA 2X7DA 4B7BA 4A51A 4ETPA 2X7CA 3DCBA 2FMEA 5HLEA 3BFNA 2GRYA 2MYSA 2UYMA 1VFVA 4BBGA 2ZFIA 2VB6A 2X51A 4PFOA 3LREA 4PFPA 2X2RA 4AS7A 1Q0BA 1D1CA 3CNZA 3DC4A 3GBJA 4PJNA 1MKJA 1T5CA 5LT4A 1MMAA 1VOMA 1MMGA 4ZCAA 4E7ZA 1MMDA 2Y5WA 2WOGA 4PJMA 2GM1A 4ANJA 1D0YA 1F9WA 4H1GA 4UBFA 1GOJA 1X88A 2Q2ZA 2ZFLA 1SDMA 1F9TA 1RY6A 4PJLA 2Y65A 3B6VA 1VFXA 3CJOA 3KINA 4LNUK 4A14A 2FKYA 2X7EA 5LT3A 3COBA 1N6MA 2KINA 3L1CA 1VFZA 1F9VA 2OWMA 1I6IA 4Y05A 2Q2YA 3HQDA 2PG2A 1F9UA 2NCDA 1MNEA 1LVKA 3X2TA 3ZFCA 1CZ7A 1FMVA 4PJJA 1YRSA 2FL6A 1BR2A 3K3BA 5LT0A 2ZFJA 1MMNA 4AP0A 1II6A 1D0XA 4A5YA 2G1QA 4E7SA 4BXNA 2ZFMA 1V8KA 1D1AA 2VVGA 4A28A 4A1ZA 4DBRA 3ZCWA 1D1BA 2V26A 3L9HA 4FRZA 3ZFDA 2ZFKA 4A50A 3WPNA 4DBQA 3NWNA 2UYIA 3K5EA 5LT2A 3KARA 3U06A 1D0ZA 3WRDA 3H4SA 1LKXA 4PK4A 2FL2A 1BR1A 4BN2A 2HEHA 2IEHA 1G8XA 5LT1A 1KK7A 4GKRA 3B6UA 1BG2A 3KENA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1VFW A;  3T0Q A;  1FMW A;  1I5S A;  1V8J A;  2XAE A;  3PXN A;  5GSZ A;  4HNA K;  2VAS A;  2XT3 A;  1BR4 A;  4ZHI A;  2X7D A;  4B7B A;  4A51 A;  4ETP A;  2X7C A;  3DCB A;  2FME A;  5HLE A;  3BFN A;  2GRY A;  2MYS A;  2UYM A;  1VFV A;  4BBG A;  2ZFI A;  2VB6 A;  2X51 A;  4PFO A;  3LRE A;  4PFP A;  2X2R A;  4AS7 A;  1Q0B A;  1D1C A;  3CNZ A;  3DC4 A;  3GBJ A;  4PJN A;  1MKJ A;  1T5C A;  5LT4 A;  1MMA A;  1VOM A;  1MMG A;  4ZCA A;  4E7Z A;  1MMD A;  2Y5W A;  2WOG A;  4PJM A;  2GM1 A;  4ANJ A;  1D0Y A;  1F9W A;  4H1G A;  4UBF A;  1GOJ A;  1X88 A;  2Q2Z A;  2ZFL A;  1SDM A;  1F9T A;  1RY6 A;  4PJL A;  2Y65 A;  3B6V A;  1VFX A;  3CJO A;  3KIN A;  4LNU K;  4A14 A;  2FKY A;  2X7E A;  5LT3 A;  3COB A;  1N6M A;  2KIN A;  3L1C A;  1VFZ A;  1F9V A;  2OWM A;  1I6I A;  4Y05 A;  2Q2Y A;  3HQD A;  2PG2 A;  1F9U A;  2NCD A;  1MNE A;  1LVK A;  3X2T A;  3ZFC A;  1CZ7 A;  1FMV A;  4PJJ A;  1YRS A;  2FL6 A;  1BR2 A;  3K3B A;  5LT0 A;  2ZFJ A;  1MMN A;  4AP0 A;  1II6 A;  1D0X A;  4A5Y A;  2G1Q A;  4E7S A;  4BXN A;  2ZFM A;  1V8K A;  1D1A A;  2VVG A;  4A28 A;  4A1Z A;  4DBR A;  3ZCW A;  1D1B A;  2V26 A;  3L9H A;  4FRZ A;  3ZFD A;  2ZFK A;  4A50 A;  3WPN A;  4DBQ A;  3NWN A;  2UYI A;  3K5E A;  5LT2 A;  3KAR A;  3U06 A;  1D0Z A;  3WRD A;  3H4S A;  1LKX A;  4PK4 A;  2FL2 A;  1BR1 A;  4BN2 A;  2HEH A;  2IEH A;  1G8X A;  5LT1 A;  1KK7 A;  4GKR A;  3B6U A;  1BG2 A;  3KEN A; 
#chains in the Genus database with same CATH topology
 1VFW A;  3T0Q A;  1FMW A;  1I5S A;  1V8J A;  2XAE A;  3PXN A;  5GSZ A;  4HNA K;  2VAS A;  2XT3 A;  1BR4 A;  4ZHI A;  2X7D A;  4B7B A;  4A51 A;  4ETP A;  2X7C A;  3DCB A;  2FME A;  5HLE A;  3BFN A;  2GRY A;  2MYS A;  2UYM A;  1VFV A;  4BBG A;  2ZFI A;  2VB6 A;  2X51 A;  4PFO A;  3LRE A;  4PFP A;  2X2R A;  4AS7 A;  1Q0B A;  1D1C A;  3CNZ A;  3DC4 A;  3GBJ A;  4PJN A;  1MKJ A;  1T5C A;  5LT4 A;  1MMA A;  1VOM A;  1MMG A;  4ZCA A;  4E7Z A;  1MMD A;  2Y5W A;  2WOG A;  4PJM A;  2GM1 A;  4ANJ A;  1D0Y A;  4GKQ A;  1F9W A;  4H1G A;  4UBF A;  1GOJ A;  1X88 A;  2Q2Z A;  2ZFL A;  1SDM A;  1F9T A;  1RY6 A;  4PJL A;  2Y65 A;  3B6V A;  1VFX A;  3CJO A;  3KIN A;  4LNU K;  4A14 A;  2FKY A;  2X7E A;  5LT3 A;  3COB A;  1N6M A;  2KIN A;  3L1C A;  1VFZ A;  1F9V A;  2OWM A;  1I6I A;  4Y05 A;  2Q2Y A;  4GKP A;  3HQD A;  2PG2 A;  1F9U A;  2NCD A;  1MNE A;  1LVK A;  3X2T A;  3ZFC A;  2O0A A;  1CZ7 A;  1FMV A;  4PJJ A;  1YRS A;  2FL6 A;  1BR2 A;  3K3B A;  5LT0 A;  2ZFJ A;  1MMN A;  4AP0 A;  1II6 A;  1D0X A;  4A5Y A;  2G1Q A;  4E7S A;  4BXN A;  2ZFM A;  1V8K A;  1D1A A;  2VVG A;  4A28 A;  4A1Z A;  4DBR A;  3ZCW A;  1D1B A;  2V26 A;  3L9H A;  4FRZ A;  3ZFD A;  2ZFK A;  4A50 A;  3WPN A;  4DBQ A;  3NWN A;  2UYI A;  3K5E A;  5LT2 A;  3KAR A;  3U06 A;  1D0Z A;  4ETP B;  3WRD A;  3H4S A;  1LKX A;  4PK4 A;  2FL2 A;  1BR1 A;  4BN2 A;  2HEH A;  2IEH A;  1G8X A;  5LT1 A;  1KK7 A;  4GKR A;  3B6U A;  1BG2 A;  3KEN A; 
#chains in the Genus database with same CATH homology
 1VFW A;  3T0Q A;  1FMW A;  1I5S A;  1V8J A;  2XAE A;  3PXN A;  5GSZ A;  4HNA K;  2VAS A;  2XT3 A;  1BR4 A;  4ZHI A;  2X7D A;  4B7B A;  4A51 A;  4ETP A;  2X7C A;  3DCB A;  2FME A;  5HLE A;  3BFN A;  2GRY A;  2MYS A;  2UYM A;  1VFV A;  4BBG A;  2ZFI A;  2VB6 A;  2X51 A;  4PFO A;  3LRE A;  4PFP A;  2X2R A;  4AS7 A;  1Q0B A;  1D1C A;  3CNZ A;  3DC4 A;  3GBJ A;  4PJN A;  1MKJ A;  1T5C A;  5LT4 A;  1MMA A;  1VOM A;  1MMG A;  4ZCA A;  4E7Z A;  1MMD A;  2Y5W A;  2WOG A;  4PJM A;  2GM1 A;  4ANJ A;  1D0Y A;  1F9W A;  4H1G A;  4UBF A;  1GOJ A;  1X88 A;  2Q2Z A;  2ZFL A;  1SDM A;  1F9T A;  1RY6 A;  4PJL A;  2Y65 A;  3B6V A;  1VFX A;  3CJO A;  3KIN A;  4LNU K;  4A14 A;  2FKY A;  2X7E A;  5LT3 A;  3COB A;  1N6M A;  2KIN A;  3L1C A;  1VFZ A;  1F9V A;  2OWM A;  1I6I A;  4Y05 A;  2Q2Y A;  3HQD A;  2PG2 A;  1F9U A;  2NCD A;  1MNE A;  1LVK A;  3X2T A;  3ZFC A;  1CZ7 A;  1FMV A;  4PJJ A;  1YRS A;  2FL6 A;  1BR2 A;  3K3B A;  5LT0 A;  2ZFJ A;  1MMN A;  4AP0 A;  1II6 A;  1D0X A;  4A5Y A;  2G1Q A;  4E7S A;  4BXN A;  2ZFM A;  1V8K A;  1D1A A;  2VVG A;  4A28 A;  4A1Z A;  4DBR A;  3ZCW A;  1D1B A;  2V26 A;  3L9H A;  4FRZ A;  3ZFD A;  2ZFK A;  4A50 A;  3WPN A;  4DBQ A;  3NWN A;  2UYI A;  3K5E A;  5LT2 A;  3KAR A;  3U06 A;  1D0Z A;  3WRD A;  3H4S A;  1LKX A;  4PK4 A;  2FL2 A;  1BR1 A;  4BN2 A;  2HEH A;  2IEH A;  1G8X A;  5LT1 A;  1KK7 A;  4GKR A;  3B6U A;  1BG2 A;  3KEN A; 
...loading similar chains, please wait...
similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
...loading similar chains, please wait...
#similar chains, but unknotted
...loading similar chains, please wait...
#similar chains in the pdb database (?% sequence similarity)
...loading similar chains, please wait...