3B6VA

Crystal structure of the motor domain of human kinesin family member 3c in complex with adp
Total Genus 90
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The genus trace: a function that shows values of genus (vertical axis) for subchains spanned between the first residue, and all other residues (shown on horizontal axis). The number of the latter residue and the genus of a given subchain are shown interactively.

Total Genus
90
sequence length
374
structure length
306
Chain Sequence
b'SEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTFDAVYDASSKQADLYDETVRPLIDSVLQGFNGTVFAYGQTGTGKTYTMQGTWVEPELRGVIPNAFEHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKRLELKENPETGVYIKDLSSFVTKNVKEIEHVMNLGNQTRSSRSHAIFIITVECSEHIRVGKLNLVDLAGSENLSLSALGNVIAALAHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANRAKNIKNKPRVNEDPKDTLLR'
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The genus matrix. At position (x,y) a genus value for a subchain spanned between x’th and y’th residue is shown. Values of the genus are represented by color, according to the scale given on the right.

Structure visualization

After clicking on a point (x,y) in the genus matrix above, a subchain from x to y is shown in color.

Chord Diagram
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molecule keywords Kinesin-like protein KIF3C
publication title Motor domain of human kinesin family member 3C in complex with ADP.
rcsb
source organism Homo sapiens
molecule tags Motor protein
total genus 90
structure length 306
sequence length 374
chains with identical sequence B
ec nomenclature
pdb deposition date 2007-10-29

pfam database annotations

chain Pfam Accession Code Pfam Family Identifier Pfam Description
A PF00225 Kinesin Kinesin motor domain
Image from the rcsb pdb (www.rcsb.org)
cath code
ClassArchitectureTopologyHomologyDomain
3.40.850.10 Alpha Beta 3-Layer(aba) Sandwich Kinesin Kinesin motor domain 3b6vA00
1D1CA 3WPNA 5LT3A 4PK4A 4A28A 3ZFDA 2MYSA 4DBRA 4FRZA 1F9WA 1KK7A 1CZ7A 3B6VA 1MMAA 1MNEA 4E7ZA 4PFOA 5LT1A 4H1GA 1T5CA 1FMVA 3PXNA 1VFZA 1V8JA 3CJOA 4PJLA 1LVKA 1G8XA 2ZFIA 4E7SA 1BR2A 2ZFJA 2Y5WA 3COBA 5LT0A 1VFXA 3T0QA 4BBGA 2XT3A 1MMGA 4PJJA 2G1QA 3ZCWA 3LREA 3L1CA 1LKXA 2GRYA 2ZFMA 2FL2A 4BN2A 2VASA 3NWNA 5HLEA 1F9UA 2ZFKA 2ZFLA 4Y05A 4A1ZA 5LT2A 2X7EA 1D0ZA 1X88A 2Q2YA 1F9TA 2GM1A 3DCBA 4A51A 1D0XA 1VFWA 4HNAK 2IEHA 2VB6A 1RY6A 4ANJA 1D1AA 1YRSA 1BG2A 3X2TA 4A5YA 4AS7A 2V26A 2NCDA 1VFVA 4B7BA 1FMWA 4PJNA 2Y65A 4ZCAA 4PJMA 4UBFA 3L9HA 2HEHA 4PFPA 3KINA 2XAEA 3B6UA 5GSZA 4GKRA 1II6A 1SDMA 3CNZA 1I6IA 5LT4A 2WOGA 4AP0A 3WRDA 2UYMA 4ETPA 2X51A 1I5SA 1BR4A 1V8KA 2X7DA 2X2RA 3K5EA 2Q2ZA 1D0YA 3BFNA 1BR1A 2FL6A 2PG2A 2UYIA 4BXNA 3H4SA 3U06A 4LNUK 1MMNA 2FMEA 1F9VA 3HQDA 4ZHIA 3ZFCA 1Q0BA 2OWMA 3GBJA 2X7CA 2FKYA 1D1BA 4A14A 3K3BA 2KINA 3KENA 4A50A 1GOJA 4DBQA 2VVGA 3KARA 1MKJA 1VOMA 1N6MA 3DC4A 1MMDA
chains in the Genus database with same CATH superfamily
1D1CA 3WPNA 5LT3A 4PK4A 4A28A 3ZFDA 2MYSA 4DBRA 4FRZA 1F9WA 1KK7A 1CZ7A 3B6VA 1MMAA 1MNEA 4E7ZA 4PFOA 5LT1A 4H1GA 1T5CA 1FMVA 3PXNA 1VFZA 1V8JA 3CJOA 4PJLA 1LVKA 1G8XA 2ZFIA 4E7SA 1BR2A 2ZFJA 2Y5WA 3COBA 5LT0A 1VFXA 3T0QA 4BBGA 4GKPA 2XT3A 1MMGA 4PJJA 2G1QA 3ZCWA 3LREA 3L1CA 1LKXA 2GRYA 2ZFMA 2FL2A 4BN2A 2VASA 3NWNA 5HLEA 1F9UA 2ZFKA 2ZFLA 4Y05A 4A1ZA 5LT2A 2X7EA 1D0ZA 1X88A 2Q2YA 1F9TA 2GM1A 3DCBA 4A51A 1D0XA 1VFWA 4HNAK 2IEHA 2VB6A 1RY6A 4ANJA 1D1AA 1YRSA 1BG2A 3X2TA 4A5YA 4AS7A 2V26A 2NCDA 1VFVA 4B7BA 1FMWA 4PJNA 2Y65A 4ZCAA 4PJMA 4UBFA 3L9HA 2HEHA 4PFPA 3KINA 2XAEA 3B6UA 5GSZA 4GKRA 1II6A 1SDMA 3CNZA 1I6IA 5LT4A 2WOGA 4AP0A 3WRDA 2UYMA 4ETPA 2X51A 1I5SA 1BR4A 1V8KA 2X7DA 2X2RA 3K5EA 2Q2ZA 1D0YA 3BFNA 1BR1A 2FL6A 2PG2A 2UYIA 4BXNA 3H4SA 3U06A 4LNUK 1MMNA 2FMEA 1F9VA 3HQDA 4ZHIA 3ZFCA 1Q0BA 2OWMA 3GBJA 2O0AA 2X7CA 2FKYA 1D1BA 4A14A 3K3BA 2KINA 3KENA 4GKQA 1GOJA 4A50A 4DBQA 2VVGA 3KARA 1MKJA 1VOMA 1N6MA 4ETPB 3DC4A 1MMDA
chains in the Genus database with same CATH topology
1D1CA 3WPNA 5LT3A 4PK4A 4A28A 3ZFDA 2MYSA 4DBRA 4FRZA 1F9WA 1KK7A 1CZ7A 3B6VA 1MMAA 1MNEA 4E7ZA 4PFOA 5LT1A 4H1GA 1T5CA 1FMVA 3PXNA 1VFZA 1V8JA 3CJOA 4PJLA 1LVKA 1G8XA 2ZFIA 4E7SA 1BR2A 2ZFJA 2Y5WA 3COBA 5LT0A 1VFXA 3T0QA 4BBGA 2XT3A 1MMGA 4PJJA 2G1QA 3ZCWA 3LREA 3L1CA 1LKXA 2GRYA 2ZFMA 2FL2A 4BN2A 2VASA 3NWNA 5HLEA 1F9UA 2ZFKA 2ZFLA 4Y05A 4A1ZA 5LT2A 2X7EA 1D0ZA 1X88A 2Q2YA 1F9TA 2GM1A 3DCBA 4A51A 1D0XA 1VFWA 4HNAK 2IEHA 2VB6A 1RY6A 4ANJA 1D1AA 1YRSA 1BG2A 3X2TA 4A5YA 4AS7A 2V26A 2NCDA 1VFVA 4B7BA 1FMWA 4PJNA 2Y65A 4ZCAA 4PJMA 4UBFA 3L9HA 2HEHA 4PFPA 3KINA 2XAEA 3B6UA 5GSZA 4GKRA 1II6A 1SDMA 3CNZA 1I6IA 5LT4A 2WOGA 4AP0A 3WRDA 2UYMA 4ETPA 2X51A 1I5SA 1BR4A 1V8KA 2X7DA 2X2RA 3K5EA 2Q2ZA 1D0YA 3BFNA 1BR1A 2FL6A 2PG2A 2UYIA 4BXNA 3H4SA 3U06A 4LNUK 1MMNA 2FMEA 1F9VA 3HQDA 4ZHIA 3ZFCA 1Q0BA 2OWMA 3GBJA 2X7CA 2FKYA 1D1BA 4A14A 3K3BA 2KINA 3KENA 4A50A 1GOJA 4DBQA 2VVGA 3KARA 1MKJA 1VOMA 1N6MA 3DC4A 1MMDA
chains in the Genus database with same CATH homology


 
#chains in the Genus database with same CATH superfamily
 1D1C A;  3WPN A;  5LT3 A;  4PK4 A;  4A28 A;  3ZFD A;  2MYS A;  4DBR A;  4FRZ A;  1F9W A;  1KK7 A;  1CZ7 A;  3B6V A;  1MMA A;  1MNE A;  4E7Z A;  4PFO A;  5LT1 A;  4H1G A;  1T5C A;  1FMV A;  3PXN A;  1VFZ A;  1V8J A;  3CJO A;  4PJL A;  1LVK A;  1G8X A;  2ZFI A;  4E7S A;  1BR2 A;  2ZFJ A;  2Y5W A;  3COB A;  5LT0 A;  1VFX A;  3T0Q A;  4BBG A;  2XT3 A;  1MMG A;  4PJJ A;  2G1Q A;  3ZCW A;  3LRE A;  3L1C A;  1LKX A;  2GRY A;  2ZFM A;  2FL2 A;  4BN2 A;  2VAS A;  3NWN A;  5HLE A;  1F9U A;  2ZFK A;  2ZFL A;  4Y05 A;  4A1Z A;  5LT2 A;  2X7E A;  1D0Z A;  1X88 A;  2Q2Y A;  1F9T A;  2GM1 A;  3DCB A;  4A51 A;  1D0X A;  1VFW A;  4HNA K;  2IEH A;  2VB6 A;  1RY6 A;  4ANJ A;  1D1A A;  1YRS A;  1BG2 A;  3X2T A;  4A5Y A;  4AS7 A;  2V26 A;  2NCD A;  1VFV A;  4B7B A;  1FMW A;  4PJN A;  2Y65 A;  4ZCA A;  4PJM A;  4UBF A;  3L9H A;  2HEH A;  4PFP A;  3KIN A;  2XAE A;  3B6U A;  5GSZ A;  4GKR A;  1II6 A;  1SDM A;  3CNZ A;  1I6I A;  5LT4 A;  2WOG A;  4AP0 A;  3WRD A;  2UYM A;  4ETP A;  2X51 A;  1I5S A;  1BR4 A;  1V8K A;  2X7D A;  2X2R A;  3K5E A;  2Q2Z A;  1D0Y A;  3BFN A;  1BR1 A;  2FL6 A;  2PG2 A;  2UYI A;  4BXN A;  3H4S A;  3U06 A;  4LNU K;  1MMN A;  2FME A;  1F9V A;  3HQD A;  4ZHI A;  3ZFC A;  1Q0B A;  2OWM A;  3GBJ A;  2X7C A;  2FKY A;  1D1B A;  4A14 A;  3K3B A;  2KIN A;  3KEN A;  4A50 A;  1GOJ A;  4DBQ A;  2VVG A;  3KAR A;  1MKJ A;  1VOM A;  1N6M A;  3DC4 A;  1MMD A; 
#chains in the Genus database with same CATH topology
 1D1C A;  3WPN A;  5LT3 A;  4PK4 A;  4A28 A;  3ZFD A;  2MYS A;  4DBR A;  4FRZ A;  1F9W A;  1KK7 A;  1CZ7 A;  3B6V A;  1MMA A;  1MNE A;  4E7Z A;  4PFO A;  5LT1 A;  4H1G A;  1T5C A;  1FMV A;  3PXN A;  1VFZ A;  1V8J A;  3CJO A;  4PJL A;  1LVK A;  1G8X A;  2ZFI A;  4E7S A;  1BR2 A;  2ZFJ A;  2Y5W A;  3COB A;  5LT0 A;  1VFX A;  3T0Q A;  4BBG A;  4GKP A;  2XT3 A;  1MMG A;  4PJJ A;  2G1Q A;  3ZCW A;  3LRE A;  3L1C A;  1LKX A;  2GRY A;  2ZFM A;  2FL2 A;  4BN2 A;  2VAS A;  3NWN A;  5HLE A;  1F9U A;  2ZFK A;  2ZFL A;  4Y05 A;  4A1Z A;  5LT2 A;  2X7E A;  1D0Z A;  1X88 A;  2Q2Y A;  1F9T A;  2GM1 A;  3DCB A;  4A51 A;  1D0X A;  1VFW A;  4HNA K;  2IEH A;  2VB6 A;  1RY6 A;  4ANJ A;  1D1A A;  1YRS A;  1BG2 A;  3X2T A;  4A5Y A;  4AS7 A;  2V26 A;  2NCD A;  1VFV A;  4B7B A;  1FMW A;  4PJN A;  2Y65 A;  4ZCA A;  4PJM A;  4UBF A;  3L9H A;  2HEH A;  4PFP A;  3KIN A;  2XAE A;  3B6U A;  5GSZ A;  4GKR A;  1II6 A;  1SDM A;  3CNZ A;  1I6I A;  5LT4 A;  2WOG A;  4AP0 A;  3WRD A;  2UYM A;  4ETP A;  2X51 A;  1I5S A;  1BR4 A;  1V8K A;  2X7D A;  2X2R A;  3K5E A;  2Q2Z A;  1D0Y A;  3BFN A;  1BR1 A;  2FL6 A;  2PG2 A;  2UYI A;  4BXN A;  3H4S A;  3U06 A;  4LNU K;  1MMN A;  2FME A;  1F9V A;  3HQD A;  4ZHI A;  3ZFC A;  1Q0B A;  2OWM A;  3GBJ A;  2O0A A;  2X7C A;  2FKY A;  1D1B A;  4A14 A;  3K3B A;  2KIN A;  3KEN A;  4GKQ A;  1GOJ A;  4A50 A;  4DBQ A;  2VVG A;  3KAR A;  1MKJ A;  1VOM A;  1N6M A;  4ETP B;  3DC4 A;  1MMD A; 
#chains in the Genus database with same CATH homology
 1D1C A;  3WPN A;  5LT3 A;  4PK4 A;  4A28 A;  3ZFD A;  2MYS A;  4DBR A;  4FRZ A;  1F9W A;  1KK7 A;  1CZ7 A;  3B6V A;  1MMA A;  1MNE A;  4E7Z A;  4PFO A;  5LT1 A;  4H1G A;  1T5C A;  1FMV A;  3PXN A;  1VFZ A;  1V8J A;  3CJO A;  4PJL A;  1LVK A;  1G8X A;  2ZFI A;  4E7S A;  1BR2 A;  2ZFJ A;  2Y5W A;  3COB A;  5LT0 A;  1VFX A;  3T0Q A;  4BBG A;  2XT3 A;  1MMG A;  4PJJ A;  2G1Q A;  3ZCW A;  3LRE A;  3L1C A;  1LKX A;  2GRY A;  2ZFM A;  2FL2 A;  4BN2 A;  2VAS A;  3NWN A;  5HLE A;  1F9U A;  2ZFK A;  2ZFL A;  4Y05 A;  4A1Z A;  5LT2 A;  2X7E A;  1D0Z A;  1X88 A;  2Q2Y A;  1F9T A;  2GM1 A;  3DCB A;  4A51 A;  1D0X A;  1VFW A;  4HNA K;  2IEH A;  2VB6 A;  1RY6 A;  4ANJ A;  1D1A A;  1YRS A;  1BG2 A;  3X2T A;  4A5Y A;  4AS7 A;  2V26 A;  2NCD A;  1VFV A;  4B7B A;  1FMW A;  4PJN A;  2Y65 A;  4ZCA A;  4PJM A;  4UBF A;  3L9H A;  2HEH A;  4PFP A;  3KIN A;  2XAE A;  3B6U A;  5GSZ A;  4GKR A;  1II6 A;  1SDM A;  3CNZ A;  1I6I A;  5LT4 A;  2WOG A;  4AP0 A;  3WRD A;  2UYM A;  4ETP A;  2X51 A;  1I5S A;  1BR4 A;  1V8K A;  2X7D A;  2X2R A;  3K5E A;  2Q2Z A;  1D0Y A;  3BFN A;  1BR1 A;  2FL6 A;  2PG2 A;  2UYI A;  4BXN A;  3H4S A;  3U06 A;  4LNU K;  1MMN A;  2FME A;  1F9V A;  3HQD A;  4ZHI A;  3ZFC A;  1Q0B A;  2OWM A;  3GBJ A;  2X7C A;  2FKY A;  1D1B A;  4A14 A;  3K3B A;  2KIN A;  3KEN A;  4A50 A;  1GOJ A;  4DBQ A;  2VVG A;  3KAR A;  1MKJ A;  1VOM A;  1N6M A;  3DC4 A;  1MMD A; 
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similar chains in the Genus database (?% sequence similarity)
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similar chains in the pdb database (?% sequence similarity)

 
#similar chains in the Genus database (?% sequence similarity)
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